11-64950483-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950483
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950483
    reference: chr 11
allele count: 1
allele frequency: 8.400537634408602e-6
allele num: 119040
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.267+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.267+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.267+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.267+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.267+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.162+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.267+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.267+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.267+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.267+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.267+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.267+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.267+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.312+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.267+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.267+44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.348+44T>C
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5339
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

11-64950557-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950557
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950557
    reference: chr 11
allele count: 2
allele frequency: 1.657577616071872e-5
allele num: 120658
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.268-42G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.313-42G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.268-42G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.268-42G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.163-42G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+118G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.268-42G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.268-42G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.268-42G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.268-42G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.268-42G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.268-42G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.268-42G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.268-42G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.268-42G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.268-42G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.349-42G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.268-42G>C
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

11-64950570-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950570
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950570
    reference: chr 11
allele count: 1
allele frequency: 8.287201246395068e-6
allele num: 120668
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.268-29C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.268-29C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.163-29C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.268-29C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.268-29C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.268-29C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.268-29C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.349-29C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.268-29C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.268-29C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+131C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.268-29C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.313-29C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.268-29C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.268-29C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.268-29C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.268-29C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.268-29C>G
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

11-64950570-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950570
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950570
    reference: chr 11
allele count: 1
allele frequency: 8.287201246395068e-6
allele num: 120668
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.268-29C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.268-29C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.268-29C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.163-29C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.349-29C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+131C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.268-29C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.268-29C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.268-29C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.268-29C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.268-29C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.268-29C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.268-29C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.268-29C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.268-29C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.268-29C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.313-29C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.268-29C>T
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3750
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

11-64950571-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950571
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950571
    reference: chr 11
allele count: 1
allele frequency: 8.285827919925758e-6
allele num: 120688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.268-28G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.268-28G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.268-28G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.163-28G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.349-28G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.268-28G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.268-28G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.268-28G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.268-28G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+132G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.268-28G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.268-28G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.268-28G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.268-28G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.268-28G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.268-28G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.313-28G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.268-28G>A
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-64950581-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950581
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950581
    reference: chr 11
allele count: 2
allele frequency: 1.65694591728526e-5
allele num: 120704
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.268-18A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.268-18A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.268-18A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.268-18A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.268-18A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.268-18A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.313-18A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.349-18A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.268-18A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.268-18A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.268-18A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.268-18A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.268-18A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.268-18A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+142A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.163-18A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.268-18A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.268-18A>G
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP

11-64950584-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950584
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950584
    reference: chr 11
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+145C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.268-15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.268-15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.268-15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.268-15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.268-15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.163-15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.268-15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.268-15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.268-15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.268-15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.268-15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.268-15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.268-15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.313-15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.268-15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.349-15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.268-15C>T
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3733
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

11-64950587-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950587
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950587
    reference: chr 11
allele count: 16
allele frequency: 1.325490845828846e-4
allele num: 120710
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.268-12G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.268-12G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.268-12G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.268-12G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.268-12G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.268-12G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.268-12G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.313-12G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.349-12G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.268-12G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.268-12G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.268-12G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.163-12G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.268-12G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+148G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.268-12G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.268-12G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.268-12G>T
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3901
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

11-64950595-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950595
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950595
    reference: chr 11
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.268-4G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.163-4G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.268-4G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.268-4G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.268-4G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.268-4G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.268-4G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.268-4G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.268-4G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.268-4G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.268-4G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.268-4G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.268-4G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+156G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.349-4G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.268-4G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.268-4G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.313-4G>A
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.268-4G>A
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-64950595-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950595
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950595
    reference: chr 11
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.268-4G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.268-4G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.268-4G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.268-4G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.268-4G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.268-4G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.349-4G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.268-4G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.268-4G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.268-4G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.163-4G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.268-4G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.268-4G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.268-4G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.268-4G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+156G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.313-4G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.268-4G>C
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.268-4G>C
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

11-64950596-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950596
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950596
    reference: chr 11
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.268-3T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.268-3T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.313-3T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.268-3T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.268-3T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.268-3T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.268-3T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.268-3T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.163-3T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.268-3T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.268-3T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.268-3T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.268-3T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.268-3T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.349-3T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.268-3T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+157T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.268-3T>C
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.268-3T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

11-64950597-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950597
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950597
    reference: chr 11
allele count: 1
allele frequency: 8.283219853221344e-6
allele num: 120726
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.268-2A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.163-2A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.268-2A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.268-2A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.349-2A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.268-2A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.268-2A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.268-2A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.268-2A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+158A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.268-2A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.313-2A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.268-2A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.268-2A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.268-2A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.268-2A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.268-2A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.268-2A>G
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22094
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.268-2A>G
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

11-64950598-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950598
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950598
    reference: chr 11
allele count: 1
allele frequency: 8.282945415389712e-6
allele num: 120730
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.268-1G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+159G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.268-1G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.268-1G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.268-1G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.268-1G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.313-1G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.268-1G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.163-1G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.268-1G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.268-1G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.268-1G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.268-1G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.349-1G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.268-1G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.268-1G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.268-1G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.268-1G>T
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.268-1G>T
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

11-64950603-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950603
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950603
    reference: chr 11
allele count: 1
allele frequency: 8.282533792737874e-6
allele num: 120736
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.272T>C
  hgvsp: ENSP00000434176.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.272T>C
  hgvsp: ENSP00000432512.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.272T>C
  hgvsp: ENSP00000435847.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.272T>C
  hgvsp: ENSP00000436002.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.317T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.272T>C
  hgvsp: ENSP00000431172.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.272T>C
  hgvsp: ENSP00000433823.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.272T>C
  hgvsp: ENSP00000435272.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.353T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.272T>C
  hgvsp: ENSP00000431793.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.272T>C
  hgvsp: ENSP00000435092.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.272T>C
  hgvsp: ENSP00000435198.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.272T>C
  hgvsp: ENSP00000279247.6:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.272T>C
  hgvsp: ENSP00000431984.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.272T>C
  hgvsp: ENSP00000431686.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.272T>C
  hgvsp: ENSP00000431528.1:p.Leu91Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.167T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+164T>C
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu91Pro
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

11-64950607-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950607
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950607
    reference: chr 11
allele count: 1
allele frequency: 8.282670995742708e-6
allele num: 120734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.276G>A
  hgvsp: ENST00000533820.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.276G>A
  hgvsp: ENST00000527699.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.276G>A
  hgvsp: ENST00000528396.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.276G>A
  hgvsp: ENST00000527739.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.276G>A
  hgvsp: ENST00000527323.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.276G>A
  hgvsp: ENST00000526954.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.276G>A
  hgvsp: ENST00000531068.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.276G>A
  hgvsp: ENST00000526966.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.321G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.276G>A
  hgvsp: ENST00000524773.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.276G>A
  hgvsp: ENST00000529133.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.276G>A
  hgvsp: ENST00000533129.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.357G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.276G>A
  hgvsp: ENST00000534373.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.276G>A
  hgvsp: ENST00000533909.1:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.171G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+168G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.276G>A
  hgvsp: ENST00000279247.6:c.276G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3798
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu92Leu
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

11-64950611-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950611
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950611
    reference: chr 11
allele count: 1
allele frequency: 8.28239659427852e-6
allele num: 120738
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.280A>T
  hgvsp: ENSP00000431984.1:p.Asn94Tyr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.325A>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.280A>T
  hgvsp: ENSP00000435198.1:p.Asn94Tyr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.280A>T
  hgvsp: ENSP00000435272.1:p.Asn94Tyr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.280A>T
  hgvsp: ENSP00000434176.1:p.Asn94Tyr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.361A>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.175A>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.280A>T
  hgvsp: ENSP00000431528.1:p.Asn94Tyr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.280A>T
  hgvsp: ENSP00000433823.1:p.Asn94Tyr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.280A>T
  hgvsp: ENSP00000432512.1:p.Asn94Tyr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.280A>T
  hgvsp: ENSP00000279247.6:p.Asn94Tyr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.280A>T
  hgvsp: ENSP00000431172.1:p.Asn94Tyr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.280A>T
  hgvsp: ENSP00000436002.1:p.Asn94Tyr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.280A>T
  hgvsp: ENSP00000431686.1:p.Asn94Tyr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.280A>T
  hgvsp: ENSP00000435092.1:p.Asn94Tyr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.280A>T
  hgvsp: ENSP00000431793.1:p.Asn94Tyr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+172A>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.280A>T
  hgvsp: ENSP00000435847.1:p.Asn94Tyr
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn94Tyr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-64950618-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950618
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950618
    reference: chr 11
allele count: 1
allele frequency: 8.281985026171072e-6
allele num: 120744
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.287A>C
  hgvsp: ENSP00000434176.1:p.Gln96Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.287A>C
  hgvsp: ENSP00000432512.1:p.Gln96Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.368A>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.287A>C
  hgvsp: ENSP00000431793.1:p.Gln96Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.287A>C
  hgvsp: ENSP00000433823.1:p.Gln96Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.287A>C
  hgvsp: ENSP00000435847.1:p.Gln96Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.287A>C
  hgvsp: ENSP00000431528.1:p.Gln96Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.287A>C
  hgvsp: ENSP00000431172.1:p.Gln96Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.182A>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.287A>C
  hgvsp: ENSP00000436002.1:p.Gln96Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.287A>C
  hgvsp: ENSP00000435272.1:p.Gln96Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.287A>C
  hgvsp: ENSP00000431686.1:p.Gln96Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.287A>C
  hgvsp: ENSP00000279247.6:p.Gln96Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.332A>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.287A>C
  hgvsp: ENSP00000431984.1:p.Gln96Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.287A>C
  hgvsp: ENSP00000435092.1:p.Gln96Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.287A>C
  hgvsp: ENSP00000435198.1:p.Gln96Pro
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+179A>C
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln96Pro
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

11-64950628-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950628
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950628
    reference: chr 11
allele count: 1
allele frequency: 8.282122210995345e-6
allele num: 120742
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.297G>A
  hgvsp: ENST00000533820.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.297G>A
  hgvsp: ENST00000279247.6:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.297G>A
  hgvsp: ENST00000527699.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.297G>A
  hgvsp: ENST00000533909.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.297G>A
  hgvsp: ENST00000524773.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.297G>A
  hgvsp: ENST00000529133.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.297G>A
  hgvsp: ENST00000526966.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.342G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.297G>A
  hgvsp: ENST00000533129.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.297G>A
  hgvsp: ENST00000527323.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.297G>A
  hgvsp: ENST00000527739.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.297G>A
  hgvsp: ENST00000526954.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.297G>A
  hgvsp: ENST00000531068.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+189G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.192G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.297G>A
  hgvsp: ENST00000534373.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.297G>A
  hgvsp: ENST00000528396.1:c.297G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.378G>A
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2852
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val99Val
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

11-64950633-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950633
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950633
    reference: chr 11
allele count: 11
allele frequency: 9.110636253706373e-5
allele num: 120738
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.383G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+194G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.302G>C
  hgvsp: ENSP00000432512.1:p.Gly101Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.302G>C
  hgvsp: ENSP00000431172.1:p.Gly101Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.302G>C
  hgvsp: ENSP00000434176.1:p.Gly101Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.302G>C
  hgvsp: ENSP00000431528.1:p.Gly101Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.302G>C
  hgvsp: ENSP00000431984.1:p.Gly101Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.302G>C
  hgvsp: ENSP00000435092.1:p.Gly101Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.197G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.302G>C
  hgvsp: ENSP00000431686.1:p.Gly101Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.302G>C
  hgvsp: ENSP00000435272.1:p.Gly101Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.302G>C
  hgvsp: ENSP00000435198.1:p.Gly101Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.302G>C
  hgvsp: ENSP00000433823.1:p.Gly101Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.302G>C
  hgvsp: ENSP00000279247.6:p.Gly101Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.347G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.302G>C
  hgvsp: ENSP00000436002.1:p.Gly101Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.302G>C
  hgvsp: ENSP00000435847.1:p.Gly101Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.302G>C
  hgvsp: ENSP00000431793.1:p.Gly101Ala
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly101Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

11-64950635-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950635
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950635
    reference: chr 11
allele count: 2
allele frequency: 1.656479318855704e-5
allele num: 120738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.385G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+196G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.349G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.199G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.304G>A
  hgvsp: ENSP00000431793.1:p.Ala102Thr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.304G>A
  hgvsp: ENSP00000431984.1:p.Ala102Thr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.304G>A
  hgvsp: ENSP00000433823.1:p.Ala102Thr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.304G>A
  hgvsp: ENSP00000435092.1:p.Ala102Thr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.304G>A
  hgvsp: ENSP00000431528.1:p.Ala102Thr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.304G>A
  hgvsp: ENSP00000279247.6:p.Ala102Thr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.304G>A
  hgvsp: ENSP00000436002.1:p.Ala102Thr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.304G>A
  hgvsp: ENSP00000431172.1:p.Ala102Thr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.304G>A
  hgvsp: ENSP00000431686.1:p.Ala102Thr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.304G>A
  hgvsp: ENSP00000435198.1:p.Ala102Thr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.304G>A
  hgvsp: ENSP00000434176.1:p.Ala102Thr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.304G>A
  hgvsp: ENSP00000435847.1:p.Ala102Thr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.304G>A
  hgvsp: ENSP00000435272.1:p.Ala102Thr
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.304G>A
  hgvsp: ENSP00000432512.1:p.Ala102Thr
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala102Thr
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

11-64950638-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950638
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950638
    reference: chr 11
allele count: 182
allele frequency: 1.507496065600928e-3
allele num: 120730
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.307A>G
  hgvsp: ENSP00000432512.1:p.Thr103Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.307A>G
  hgvsp: ENSP00000431984.1:p.Thr103Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.352A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.307A>G
  hgvsp: ENSP00000434176.1:p.Thr103Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.388A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.307A>G
  hgvsp: ENSP00000436002.1:p.Thr103Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.307A>G
  hgvsp: ENSP00000435092.1:p.Thr103Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.307A>G
  hgvsp: ENSP00000431528.1:p.Thr103Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.307A>G
  hgvsp: ENSP00000435198.1:p.Thr103Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.307A>G
  hgvsp: ENSP00000431793.1:p.Thr103Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+199A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.307A>G
  hgvsp: ENSP00000279247.6:p.Thr103Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.307A>G
  hgvsp: ENSP00000431686.1:p.Thr103Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.307A>G
  hgvsp: ENSP00000431172.1:p.Thr103Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.307A>G
  hgvsp: ENSP00000433823.1:p.Thr103Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.202A>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.307A>G
  hgvsp: ENSP00000435272.1:p.Thr103Ala
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.307A>G
  hgvsp: ENSP00000435847.1:p.Thr103Ala
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Thr103Ala
num of homozygotes: 3
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ

11-64950641-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950641
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950641
    reference: chr 11
allele count: 1
allele frequency: 8.282945415389712e-6
allele num: 120730
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.310C>T
  hgvsp: ENSP00000435092.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.310C>T
  hgvsp: ENSP00000431793.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.310C>T
  hgvsp: ENSP00000431528.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.310C>T
  hgvsp: ENSP00000433823.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.310C>T
  hgvsp: ENSP00000434176.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.310C>T
  hgvsp: ENSP00000436002.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.310C>T
  hgvsp: ENSP00000435272.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.355C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.310C>T
  hgvsp: ENSP00000431172.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.310C>T
  hgvsp: ENSP00000432512.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.310C>T
  hgvsp: ENSP00000435847.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+202C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.310C>T
  hgvsp: ENSP00000279247.6:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.310C>T
  hgvsp: ENSP00000435198.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.391C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.310C>T
  hgvsp: ENSP00000431984.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.310C>T
  hgvsp: ENSP00000431686.1:p.Arg104Cys
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.205C>T
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg104Cys
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

11-64950642-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950642
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950642
    reference: chr 11
allele count: 13
allele frequency: 1.076836420264405e-4
allele num: 120724
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.206G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.311G>A
  hgvsp: ENSP00000431984.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.311G>A
  hgvsp: ENSP00000435092.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.311G>A
  hgvsp: ENSP00000431528.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.311G>A
  hgvsp: ENSP00000431172.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.311G>A
  hgvsp: ENSP00000433823.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.311G>A
  hgvsp: ENSP00000431686.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.311G>A
  hgvsp: ENSP00000436002.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.311G>A
  hgvsp: ENSP00000434176.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.311G>A
  hgvsp: ENSP00000432512.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.392G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.311G>A
  hgvsp: ENSP00000279247.6:p.Arg104His
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.311G>A
  hgvsp: ENSP00000435272.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.356G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.311G>A
  hgvsp: ENSP00000435198.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+203G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.311G>A
  hgvsp: ENSP00000431793.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.311G>A
  hgvsp: ENSP00000435847.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3611
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg104His
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

11-64950649-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950649
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950649
    reference: chr 11
allele count: 1
allele frequency: 8.284455048546906e-6
allele num: 120708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.213C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.318C>T
  hgvsp: ENST00000524773.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.318C>T
  hgvsp: ENST00000527699.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.318C>T
  hgvsp: ENST00000533820.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.318C>T
  hgvsp: ENST00000528396.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.318C>T
  hgvsp: ENST00000533129.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.318C>T
  hgvsp: ENST00000527323.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+210C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.318C>T
  hgvsp: ENST00000526954.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.363C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.318C>T
  hgvsp: ENST00000526966.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.318C>T
  hgvsp: ENST00000529133.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.318C>T
  hgvsp: ENST00000531068.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.318C>T
  hgvsp: ENST00000534373.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.318C>T
  hgvsp: ENST00000533909.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.399C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.318C>T
  hgvsp: ENST00000527739.1:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.318C>T
  hgvsp: ENST00000279247.6:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp106Asp
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP

11-64950650-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950650
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950650
    reference: chr 11
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.319A>T
  hgvsp: ENSP00000435092.1:p.Ile107Phe
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.319A>T
  hgvsp: ENSP00000431172.1:p.Ile107Phe
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.319A>T
  hgvsp: ENSP00000279247.6:p.Ile107Phe
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.319A>T
  hgvsp: ENSP00000431686.1:p.Ile107Phe
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.319A>T
  hgvsp: ENSP00000431793.1:p.Ile107Phe
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.319A>T
  hgvsp: ENSP00000435847.1:p.Ile107Phe
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.319A>T
  hgvsp: ENSP00000435272.1:p.Ile107Phe
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.319A>T
  hgvsp: ENSP00000434176.1:p.Ile107Phe
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.319A>T
  hgvsp: ENSP00000431984.1:p.Ile107Phe
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+211A>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.319A>T
  hgvsp: ENSP00000435198.1:p.Ile107Phe
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.214A>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.364A>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.319A>T
  hgvsp: ENSP00000431528.1:p.Ile107Phe
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.400A>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.319A>T
  hgvsp: ENSP00000432512.1:p.Ile107Phe
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.319A>T
  hgvsp: ENSP00000436002.1:p.Ile107Phe
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.319A>T
  hgvsp: ENSP00000433823.1:p.Ile107Phe
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile107Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

11-64950652-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950652
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950652
    reference: chr 11
allele count: 1
allele frequency: 8.285004142502071e-6
allele num: 120700
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.321C>G
  hgvsp: ENSP00000435272.1:p.Ile107Met
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.321C>G
  hgvsp: ENSP00000431984.1:p.Ile107Met
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.321C>G
  hgvsp: ENSP00000436002.1:p.Ile107Met
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.321C>G
  hgvsp: ENSP00000433823.1:p.Ile107Met
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.321C>G
  hgvsp: ENSP00000431686.1:p.Ile107Met
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.321C>G
  hgvsp: ENSP00000431528.1:p.Ile107Met
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.216C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.321C>G
  hgvsp: ENSP00000435092.1:p.Ile107Met
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.321C>G
  hgvsp: ENSP00000435198.1:p.Ile107Met
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.321C>G
  hgvsp: ENSP00000431172.1:p.Ile107Met
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.402C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.321C>G
  hgvsp: ENSP00000431793.1:p.Ile107Met
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.321C>G
  hgvsp: ENSP00000279247.6:p.Ile107Met
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.366C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.321C>G
  hgvsp: ENSP00000432512.1:p.Ile107Met
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.321C>G
  hgvsp: ENSP00000434176.1:p.Ile107Met
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+213C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.321C>G
  hgvsp: ENSP00000435847.1:p.Ile107Met
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile107Met
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

11-64950676-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950676
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950676
    reference: chr 11
allele count: 1
allele frequency: 8.298204268596276e-6
allele num: 120508
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.337+8C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.337+8C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.337+8C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+237C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.337+8C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.337+8C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.337+8C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.337+8C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.337+8C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.418+8C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.337+8C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.337+8C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.337+8C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.232+8C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.337+8C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.337+8C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.337+8C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.382+8C>T
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3909
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.337+8C>T
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

11-64950678-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950678
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950678
    reference: chr 11
allele count: 10
allele frequency: 8.299168423323983e-5
allele num: 120494
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+239C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.337+10C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.337+10C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.337+10C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.337+10C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.337+10C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.418+10C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.337+10C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.337+10C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.337+10C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.337+10C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.337+10C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.337+10C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.337+10C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.232+10C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.382+10C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.337+10C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.337+10C>T
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3756
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

11-64950681-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950681
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950681
    reference: chr 11
allele count: 2
allele frequency: 1.660274609420398e-5
allele num: 120462
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.337+13G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.337+13G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.337+13G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.337+13G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.337+13G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+242G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.382+13G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.337+13G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.337+13G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.337+13G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.337+13G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.337+13G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.337+13G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.232+13G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.418+13G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.337+13G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.337+13G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.337+13G>A
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22030
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3757
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

11-64950682-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950682
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950683
    reference: chr 11
allele count: 22
allele frequency: 1.826332392495434e-4
allele num: 120460
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.337+15dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.337+15dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.337+15dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.337+15dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.337+15dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.337+15dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.337+15dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.337+15dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.337+15dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.382+15dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.337+15dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.337+15dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.337+15dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.337+15dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+244dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.418+15dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.232+15dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.337+15dupC
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3866
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum

11-64950683-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950683
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950683
    reference: chr 11
allele count: 5
allele frequency: 4.154618273673015e-5
allele num: 120348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.337+15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.337+15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.337+15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.337+15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.337+15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.337+15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.337+15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.337+15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.337+15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.337+15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.337+15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.232+15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+244C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.337+15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.418+15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.337+15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.382+15C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.337+15C>T
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

11-64950684-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950684
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950684
    reference: chr 11
allele count: 2
allele frequency: 1.661129568106312e-5
allele num: 120400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.337+16G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.418+16G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.337+16G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.337+16G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.337+16G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.337+16G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.337+16G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.337+16G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.337+16G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.337+16G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.337+16G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.382+16G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.337+16G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.337+16G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.337+16G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.337+16G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+245G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.232+16G>A
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3914
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22019
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD

11-64950686-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950686
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950686
    reference: chr 11
allele count: 1
allele frequency: 8.307579835842223e-6
allele num: 120372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.337+18C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.337+18C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.337+18C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.337+18C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.337+18C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+247C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.337+18C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.337+18C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.337+18C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.337+18C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.337+18C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.337+18C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.382+18C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.232+18C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.337+18C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.337+18C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.418+18C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.337+18C>T
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ

11-64950687-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950687
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950687
    reference: chr 11
allele count: 19
allele frequency: 1.578518850838277e-4
allele num: 120366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.337+19G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.337+19G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.337+19G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.337+19G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.337+19G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.418+19G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.337+19G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.337+19G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.337+19G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.337+19G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.337+19G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.232+19G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.337+19G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.382+19G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.351+248G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.337+19G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.337+19G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.337+19G>A
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

11-64950693-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950693
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950693
    reference: chr 11
allele count: 8
allele frequency: 6.648604624104516e-5
allele num: 120326
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-252C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.337+25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.337+25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.418+25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.337+25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.337+25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.337+25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.382+25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.337+25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.337+25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.337+25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.337+25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.337+25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.337+25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.337+25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.337+25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.337+25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.232+25C>T
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3616
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

11-64950694-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950694
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950694
    reference: chr 11
allele count: 1
allele frequency: 8.31282835672009e-6
allele num: 120296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.337+26G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.418+26G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.337+26G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.337+26G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.337+26G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.337+26G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-251G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.337+26G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.337+26G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.337+26G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.337+26G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.232+26G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.337+26G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.382+26G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.337+26G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.337+26G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.337+26G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.337+26G>A
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3617
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22006
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

11-64950694-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950694
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950694
    reference: chr 11
allele count: 1
allele frequency: 8.31282835672009e-6
allele num: 120296
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.337+26G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.418+26G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.337+26G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.337+26G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.337+26G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.337+26G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.382+26G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.337+26G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-251G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.232+26G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.337+26G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.337+26G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.337+26G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.337+26G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.337+26G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.337+26G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.337+26G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.337+26G>C
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

11-64950696-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950696
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950696
    reference: chr 11
allele count: 1
allele frequency: 8.314072398942449e-6
allele num: 120278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.382+28G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.337+28G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.337+28G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.337+28G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.337+28G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.337+28G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.337+28G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.337+28G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.337+28G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.337+28G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.418+28G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.232+28G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.337+28G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.337+28G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-249G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.337+28G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.337+28G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.337+28G>T
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3759
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

11-64950697-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950697
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950697
    reference: chr 11
allele count: 1
allele frequency: 8.316284949187499e-6
allele num: 120246
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.337+29T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.337+29T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.337+29T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.232+29T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.337+29T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.418+29T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.337+29T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.337+29T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.337+29T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.337+29T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.337+29T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.337+29T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.337+29T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.337+29T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-248T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.382+29T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.337+29T>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.337+29T>G
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

11-64950700-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950700
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950700
    reference: chr 11
allele count: 1
allele frequency: 8.315178526882972e-6
allele num: 120262
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.232+32T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.337+32T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.337+32T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.337+32T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-245T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.337+32T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.337+32T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.337+32T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.337+32T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.337+32T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.337+32T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.382+32T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.337+32T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.337+32T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.337+32T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.337+32T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.337+32T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.418+32T>C
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum

11-64950710-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950710
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950710
    reference: chr 11
allele count: 1
allele frequency: 8.321821480285606e-6
allele num: 120166
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.337+42G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.337+42G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.418+42G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.382+42G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.337+42G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.337+42G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.337+42G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.337+42G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.337+42G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.337+42G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.337+42G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.337+42G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.337+42G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.232+42G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.337+42G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-235G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.337+42G>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.337+42G>T
  variant of: http://identifiers.org/hgnc/1476
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum

11-64950879-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950879
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950879
    reference: chr 11
allele count: 1
allele frequency: 1.115200178432028e-5
allele num: 89670
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-44T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-66T>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-66T>C
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP

11-64950884-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950884
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950884
    reference: chr 11
allele count: 4
allele frequency: 4.451566951566952e-5
allele num: 89856
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-39C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-61C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-61C>T
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19786
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8567
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ

11-64950886-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950886
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950886
    reference: chr 11
allele count: 2
allele frequency: 2.21744240193361e-5
allele num: 90194
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-37C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-59C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-59C>T
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

11-64950887-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950887
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950887
    reference: chr 11
allele count: 3
allele frequency: 3.308409978164494e-5
allele num: 90678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-36G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-58G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-58G>A
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

11-64950888-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950888
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950888
    reference: chr 11
allele count: 3
allele frequency: 3.340385257766396e-5
allele num: 89810
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-35C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-57C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-57C>T
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

11-64950890-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950890
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950891
    reference: chr 11
allele count: 1852
allele frequency: 2.482374071790473e-2
allele num: 74606
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-25dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-47dupC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-47dupC
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 36
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

11-64950890-T-TCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950890
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950892
    reference: chr 11
allele count: 6
allele frequency: 8.042248612712114e-5
allele num: 74606
alternate allele: TCC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-48_352-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-48_338-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-48_338-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-26_-25dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-48_338-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-48_338-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-48_233-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-48_338-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-48_383-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-48_419-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-48_338-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-48_338-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-48_338-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-48_338-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-48_338-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-48_338-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-48_338-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-48_338-47dupCC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-48_338-47dupCC
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11600
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10455
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

11-64950890-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950890
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950889
    reference: chr 11
allele count: 66
allele frequency: 8.846473473983326e-4
allele num: 74606
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-25delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-47delC
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-47delC
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17634
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 1
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: TC
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

11-64950891-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950891
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950891
    reference: chr 11
allele count: 2
allele frequency: 2.859430401464028e-5
allele num: 69944
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-32C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-54C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-54C>T
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

11-64950892-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950892
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950892
    reference: chr 11
allele count: 1
allele frequency: 1.147552271005944e-5
allele num: 87142
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-31C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-53C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-53C>T
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

11-64950893-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950893
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950893
    reference: chr 11
allele count: 1
allele frequency: 1.056613342913294e-5
allele num: 94642
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-30C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-52C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-52C>T
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11230
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ

11-64950895-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950895
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950895
    reference: chr 11
allele count: 1
allele frequency: 1.045150501672241e-5
allele num: 95680
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-28C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-50C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-50C>T
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10821
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6168
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/11-64950896-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950896
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950896
    reference: chr 11
allele count: 3
allele frequency: 3.122333007222997e-5
allele num: 96082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-27C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-49C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-49C>A
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS

http://identifiers.org/exac.variant/11-64950896-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950896
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950897
    reference: chr 11
allele count: 67
allele frequency: 6.973210382798027e-4
allele num: 96082
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-49_338-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-49_338-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-49_338-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-27_-26insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-49_338-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-49_338-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-49_233-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-49_338-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-49_419-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-49_352-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-49_383-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-49_338-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-49_338-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-49_338-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-49_338-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-49_338-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-49_338-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-49_338-48insA
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-49_338-48insA
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 2.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD

11-64950896-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950896
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950896
    reference: chr 11
allele count: 2
allele frequency: 2.081555338148665e-5
allele num: 96082
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-27C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-49C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-49C>G
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16698
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10212
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/11-64950898-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950898
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950898
    reference: chr 11
allele count: 1
allele frequency: 1.04644105397543e-5
allele num: 95562
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-25C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-47C>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-47C>A
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10038
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

11-64950898-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950898
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950898
    reference: chr 11
allele count: 1
allele frequency: 1.04644105397543e-5
allele num: 95562
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-25C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-47C>G
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-47C>G
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

11-64950898-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950898
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950898
    reference: chr 11
allele count: 8
allele frequency: 8.371528431803436e-5
allele num: 95562
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-25C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-47C>T
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-47C>T
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

11-64950899-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950899
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950899
    reference: chr 11
allele count: 1
allele frequency: 1.051347827915388e-5
allele num: 95116
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-24G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-46G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-46G>A
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15993
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

11-64950899-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950899
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950899
    reference: chr 11
allele count: 2
allele frequency: 2.102695655830775e-5
allele num: 95116
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-24G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-46G>C
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-46G>C
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15993
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

11-64950900-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64950900
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64950900
    reference: chr 11
allele count: 68
allele frequency: 6.963503051652808e-4
allele num: 97652
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435198
  ensembl transcript: ENST00000533909
  gene symbol: CAPN1
  hgvsc: ENST00000533909.1:c.338-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431984
  ensembl transcript: ENST00000527323
  gene symbol: CAPN1
  hgvsc: ENST00000527323.1:c.338-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000530442
  gene symbol: CAPN1
  hgvsc: ENST00000530442.1:n.383-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431528
  ensembl transcript: ENST00000526966
  gene symbol: CAPN1
  hgvsc: ENST00000526966.1:c.338-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435847
  ensembl transcript: ENST00000528396
  gene symbol: CAPN1
  hgvsc: ENST00000528396.1:c.338-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000436002
  ensembl transcript: ENST00000526954
  gene symbol: CAPN1
  hgvsc: ENST00000526954.1:c.338-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435092
  ensembl transcript: ENST00000531068
  gene symbol: CAPN1
  hgvsc: ENST00000531068.1:c.338-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433366
  ensembl transcript: ENST00000526468
  gene symbol: CAPN1
  hgvsc: ENST00000526468.1:c.-23G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000432512
  ensembl transcript: ENST00000529133
  gene symbol: CAPN1
  hgvsc: ENST00000529133.1:c.338-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431172
  ensembl transcript: ENST00000527699
  gene symbol: CAPN1
  hgvsc: ENST00000527699.1:c.338-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000434176
  ensembl transcript: ENST00000524773
  gene symbol: CAPN1
  hgvsc: ENST00000524773.1:c.338-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000433823
  ensembl transcript: ENST00000527739
  gene symbol: CAPN1
  hgvsc: ENST00000527739.1:c.338-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431793
  ensembl transcript: ENST00000534373
  gene symbol: CAPN1
  hgvsc: ENST00000534373.1:c.338-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000279247
  ensembl transcript: ENST00000279247
  gene symbol: CAPN1
  hgvsc: ENST00000279247.6:c.338-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000435272
  ensembl transcript: ENST00000533820
  gene symbol: CAPN1
  hgvsc: ENST00000533820.1:c.338-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527189
  gene symbol: CAPN1
  hgvsc: ENST00000527189.1:n.352-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl protein: ENSP00000431686
  ensembl transcript: ENST00000533129
  gene symbol: CAPN1
  hgvsc: ENST00000533129.1:c.338-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000528739
  gene symbol: CAPN1
  hgvsc: ENST00000528739.1:n.233-45G>A
  variant of: http://identifiers.org/hgnc/1476
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014216
  ensembl transcript: ENST00000527469
  gene symbol: CAPN1
  hgvsc: ENST00000527469.1:n.419-45G>A
  variant of: http://identifiers.org/hgnc/1476
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 4.75e1
  variant carriers: 2
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1023
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 140
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 39
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1366
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13548
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 249
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 94
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 471
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 16
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2134
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 854
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36916
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7052
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3133
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1259
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1962
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2853
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1291
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521329033043267e-5
allele num: 65732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16242
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.944e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

DP
type: SiteQuality
SIO_000300: 1.457955e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.95e-1

QD
type: SiteQuality
SIO_000300: 1.614e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.43e-1

GenotypeDepth
all individuals: 1899
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3526
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 101
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1087
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1103
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 983
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3900
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 589
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3750
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22099
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2851
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3605
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2057
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4817
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 739
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1552
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50063
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 592
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999670036296008e-5
allele num: 66674
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.08e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.84e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.018663e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.49e1

MQRankSum
type: SiteQuality
SIO_000300: -1.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.68e-1

GenotypeDepth
all individuals: 1089
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3900
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2265
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3630
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22099
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1262
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3605
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 210
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3750
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3870
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1942
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2851
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1787
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50057
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1564
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5500
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.022876e6

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.7e-1

FS
type: SiteQuality
SIO_000300: 2.792e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.32e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.17e-1

QD
type: SiteQuality
SIO_000300: 1.305e1

GenotypeDepth
all individuals: 2265
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22099
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3605
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2851
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3900
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2318
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1262
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 158
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3630
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 210
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1787
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3870
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1942
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50057
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 60
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5500
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1564
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499655079331754e-5
allele num: 66682
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.022876e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.32e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.01e-1

QD
type: SiteQuality
SIO_000300: 1.305e1

FS
type: SiteQuality
SIO_000300: 2.792e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.7e-1

GenotypeDepth
all individuals: 3750
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3605
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2318
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3900
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 982
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3640
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1261
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 146
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1945
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1089
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1102
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22098
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2851
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50056
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1578
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5613
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.25e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.21e-2

QD
type: SiteQuality
SIO_000300: 1.314e1

DP
type: SiteQuality
SIO_000300: 5.023175e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.652e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e0

GenotypeDepth
all individuals: 2399
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3716
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 90
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3605
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 71
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1965
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1081
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3900
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1261
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3750
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2318
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 979
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22098
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50055
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5847
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1596
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.041649652919559e-4
allele num: 9796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

FS
type: SiteQuality
SIO_000300: 1.426e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.377e1

DP
type: SiteQuality
SIO_000300: 5.024856e6

GenotypeDepth
all individuals: 65
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 979
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2318
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1787
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1081
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2851
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3750
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3605
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1968
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3871
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3901
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 63
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22097
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 50054
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 544
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5872
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1597
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.975e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

FS
type: SiteQuality
SIO_000300: 5.616e0

QD
type: SiteQuality
SIO_000300: 1.519e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.04e-1

DP
type: SiteQuality
SIO_000300: 5.025137e6

VQSLOD
type: SiteQuality
SIO_000300: 5.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

GenotypeDepth
all individuals: 979
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1978
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 48
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1260
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3750
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2318
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1103
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1786
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3743
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3526
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2851
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22102
bin: 9.75e1
variant carriers: 11

GenotypeDepth
all individuals: 2399
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1595
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50056
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 544
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5887
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 4.082465809348847e-4
allele num: 9798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 12
allele frequency: 1.391143055877579e-3
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.526e0

MQRankSum
type: SiteQuality
SIO_000300: 5.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.45e-1

DP
type: SiteQuality
SIO_000300: 5.026385e6

FS
type: SiteQuality
SIO_000300: 6.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

MQ
type: SiteQuality
SIO_000300: 5.965e1

VQSLOD
type: SiteQuality
SIO_000300: 2.38e0

QD
type: SiteQuality
SIO_000300: 1.317e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.09e-1

GenotypeDepth
all individuals: 1085
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2318
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1106
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1983
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3752
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2402
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3783
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2852
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1785
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 91
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3901
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3870
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 978
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22095
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1260
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3605
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5935
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50052
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 715
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1599
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.025935e6

FS
type: SiteQuality
SIO_000300: 5.818e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.57e-1

QD
type: SiteQuality
SIO_000300: 1.229e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

GenotypeDepth
all individuals: 978
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1785
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2852
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3783
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2402
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1260
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 91
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3870
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3901
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3752
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1085
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1106
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2318
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22095
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3605
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5935
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1599
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50052
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.57e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.98e-1

FS
type: SiteQuality
SIO_000300: 5.818e0

DP
type: SiteQuality
SIO_000300: 5.025935e6

QD
type: SiteQuality
SIO_000300: 1.229e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

GenotypeDepth
all individuals: 91
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1083
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3784
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1260
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2318
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3751
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3870
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 978
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2413
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1979
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1106
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2852
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22095
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3605
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1785
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3901
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5952
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50052
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 529
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1603
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020616452337212e-4
allele num: 9798
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.019e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.89e0

QD
type: SiteQuality
SIO_000300: 1.489e1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.718e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e0

DP
type: SiteQuality
SIO_000300: 5.0259e6

GenotypeDepth
all individuals: 3902
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3782
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 91
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1260
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2417
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1084
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3870
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1106
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1785
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2852
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1981
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2318
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3605
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1604
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50052
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5963
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.476e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.14e0

MQRankSum
type: SiteQuality
SIO_000300: -1.002e0

DP
type: SiteQuality
SIO_000300: 5.026071e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.91e0

VQSLOD
type: SiteQuality
SIO_000300: -1.834e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.217e0

MQ
type: SiteQuality
SIO_000300: 5.877e1

GenotypeDepth
all individuals: 978
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22094
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3605
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 93
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2420
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1106
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3751
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1260
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1979
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3902
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1084
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1785
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1604
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50052
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 529
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5964
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.99e-1

DP
type: SiteQuality
SIO_000300: 5.026077e6

QD
type: SiteQuality
SIO_000300: 8.56e0

FS
type: SiteQuality
SIO_000300: 1.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.196e0

VQSLOD
type: SiteQuality
SIO_000300: -1.327e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.759e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.004e0

MQ
type: SiteQuality
SIO_000300: 5.99e1

GenotypeDepth
all individuals: 978
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2318
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2423
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1106
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 92
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1260
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1785
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2853
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3902
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 22093
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1082
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3870
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3606
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3797
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50052
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 572
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5979
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1604
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020616452337212e-4
allele num: 9798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.026098e6

FS
type: SiteQuality
SIO_000300: 3.564e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

QD
type: SiteQuality
SIO_000300: 9.9e0

MQRankSum
type: SiteQuality
SIO_000300: -6.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.525e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.26e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

GenotypeDepth
all individuals: 3525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1260
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 978
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1785
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 90
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3751
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2852
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2423
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1081
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3902
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1981
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2318
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3606
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22094
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3869
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1106
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5987
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1594
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50051
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.946e1

MQRankSum
type: SiteQuality
SIO_000300: -7.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.472e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.72e0

FS
type: SiteQuality
SIO_000300: 5.69e-1

DP
type: SiteQuality
SIO_000300: 5.026206e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.757e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.368e0

QD
type: SiteQuality
SIO_000300: 1.365e1

GenotypeDepth
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 978
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3802
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1260
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2852
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1082
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2427
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1980
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1106
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3606
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3869
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3902
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22093
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2318
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1786
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6004
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1592
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50051
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.491e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

QD
type: SiteQuality
SIO_000300: 1.234e1

FS
type: SiteQuality
SIO_000300: 4.366e0

VQSLOD
type: SiteQuality
SIO_000300: 6.870000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.996e0

DP
type: SiteQuality
SIO_000300: 5.026437e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.31e-1

GenotypeDepth
all individuals: 978
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3869
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1983
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3751
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1082
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1260
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3807
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3902
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3606
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2432
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2318
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1106
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22093
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2852
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6017
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50051
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.121e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.835e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 5.026498e6

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

MQ
type: SiteQuality
SIO_000300: 5.837e1

VQSLOD
type: SiteQuality
SIO_000300: -1.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

QD
type: SiteQuality
SIO_000300: 1.124e1

GenotypeDepth
all individuals: 3902
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3810
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1106
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1982
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 978
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1084
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2415
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 96
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3605
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1786
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3869
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2318
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3752
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22093
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5997
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1594
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50051
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.56e-1

FS
type: SiteQuality
SIO_000300: 1.0107e1

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.66e0

VQSLOD
type: SiteQuality
SIO_000300: -2.573e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.949e0

DP
type: SiteQuality
SIO_000300: 5.026411e6

MQ
type: SiteQuality
SIO_000300: 5.989e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.186e1

GenotypeDepth
all individuals: 2851
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2409
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1981
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1106
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2318
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22099
bin: 9.75e1
variant carriers: 11

GenotypeDepth
all individuals: 3806
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 978
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 92
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3867
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3524
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3605
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3901
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1260
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1082
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1786
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5981
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50051
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.319109461966605e-4
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.209555488358028e-3
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.59e-1

FS
type: SiteQuality
SIO_000300: 1.093e0

QD
type: SiteQuality
SIO_000300: 1.455e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.21e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.63e-1

DP
type: SiteQuality
SIO_000300: 5.027725e6

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeDepth
all individuals: 980
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3868
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1262
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1081
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3798
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1984
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3606
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1106
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2412
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3753
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2851
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3902
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22090
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1589
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50050
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5982
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997601918465228e-5
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

MQ
type: SiteQuality
SIO_000300: 5.985e1

MQRankSum
type: SiteQuality
SIO_000300: 7.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.339e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.041e0

DP
type: SiteQuality
SIO_000300: 5.026259e6

QD
type: SiteQuality
SIO_000300: 1.152e1

GenotypeDepth
all individuals: 1975
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 43
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1073
bin: 3.75e1
variant carriers: 2

GenotypeDepth
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1785
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2402
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3521
bin: 7.25e1
variant carriers: 2

GenotypeDepth
all individuals: 2318
bin: 6.25e1
variant carriers: 3

GenotypeDepth
all individuals: 1105
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 22139
bin: 9.75e1
variant carriers: 148

GenotypeDepth
all individuals: 3748
bin: 7.75e1
variant carriers: 2

GenotypeDepth
all individuals: 3792
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3601
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2848
bin: 6.75e1
variant carriers: 2

GenotypeDepth
all individuals: 86
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3860
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3895
bin: 8.25e1
variant carriers: 2

GenotypeDepth
all individuals: 1265
bin: 5.25e1
variant carriers: 7

GenotypeQuality
all individuals: 528
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5956
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1583
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50070
bin: 9.75e1
variant carriers: 179

GenotypeQuality
all individuals: 709
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 8
allele frequency: 6.91085003455425e-4
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 158
allele frequency: 1.612903225806452e-2
allele num: 9796
num of homozygotes: 3

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.248403633420272e-4
allele num: 66714
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.21e0

DP
type: SiteQuality
SIO_000300: 5.050611e6

QD
type: SiteQuality
SIO_000300: 1.321e1

VQSLOD
type: SiteQuality
SIO_000300: 6.02e0

MQRankSum
type: SiteQuality
SIO_000300: 4.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.11e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.81e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeDepth
all individuals: 86
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1982
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 981
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1792
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2323
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3867
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22045
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1263
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3530
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1080
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1105
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3798
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3610
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3757
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3908
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1585
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5982
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50031
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.02082482645978e-4
allele num: 9796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.268e1

FS
type: SiteQuality
SIO_000300: 1.115e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.939e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.99e-1

DP
type: SiteQuality
SIO_000300: 5.021956e6

MQRankSum
type: SiteQuality
SIO_000300: -3.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-2

GenotypeDepth
all individuals: 3756
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 981
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3803
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1079
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2397
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3908
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1105
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1981
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1791
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1261
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3529
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3867
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2322
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22048
bin: 9.75e1
variant carriers: 13

GenotypeDepth
all individuals: 2855
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50031
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1581
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5976
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.996282304970918e-5
allele num: 66708
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.046993780234969e-4
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.02082482645978e-4
allele num: 9796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.02357e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.81e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.69e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

QD
type: SiteQuality
SIO_000300: 1.175e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.28e-1

GenotypeDepth
all individuals: 2855
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1079
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1107
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1972
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3909
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 22038
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2383
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3612
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 984
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1792
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2322
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3531
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3784
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3756
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3868
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5948
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1579
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50029
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.199e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.159999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.132e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.88e-1

FS
type: SiteQuality
SIO_000300: 4.59e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

DP
type: SiteQuality
SIO_000300: 5.021003e6

GenotypeDepth
all individuals: 3787
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 72
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 983
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3756
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1970
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1263
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2322
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2855
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3612
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3909
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3869
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 92
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1107
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22037
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1792
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2381
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1576
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50029
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5950
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

FS
type: SiteQuality
SIO_000300: 1.828e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.72e-1

QD
type: SiteQuality
SIO_000300: 1.203e1

DP
type: SiteQuality
SIO_000300: 5.020908e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e0

VQSLOD
type: SiteQuality
SIO_000300: 5.72e-1

GenotypeDepth
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3612
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1792
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 92
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2371
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1079
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1107
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3869
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 79
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3909
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1968
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3785
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 982
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2856
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22036
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2323
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3756
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1577
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50030
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 708
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5933
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.15e-1

QD
type: SiteQuality
SIO_000300: 1.371e1

MQ
type: SiteQuality
SIO_000300: 5.876e1

FS
type: SiteQuality
SIO_000300: 1.028e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.028e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.43e-1

DP
type: SiteQuality
SIO_000300: 5.020567e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.47e-1

GenotypeDepth
all individuals: 3612
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2322
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 175
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3615
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3756
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 982
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1105
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3531
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1263
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2856
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1074
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 115
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 22037
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3868
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1792
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1918
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2108
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 341
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1508
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50028
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5501
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.55e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

FS
type: SiteQuality
SIO_000300: 7.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

DP
type: SiteQuality
SIO_000300: 5.014501e6

QD
type: SiteQuality
SIO_000300: 2.018e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e0

MQRankSum
type: SiteQuality
SIO_000300: -9.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.642e0

GenotypeDepth
all individuals: 1922
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22036
bin: 9.75e1
variant carriers: 9

GenotypeDepth
all individuals: 381
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1263
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3591
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3612
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 984
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3531
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3869
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1792
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1105
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2857
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3909
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1504
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5450
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 522
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50028
bin: 9.75e1
variant carriers: 10

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.644536652835408e-4
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9766
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.13e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.34e-1

FS
type: SiteQuality
SIO_000300: 7.65e-1

QD
type: SiteQuality
SIO_000300: 1.202e1

DP
type: SiteQuality
SIO_000300: 5.014366e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.373e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

GenotypeDepth
all individuals: 1070
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1105
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3867
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3613
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3539
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 470
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2858
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 244
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1903
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1792
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3912
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 137
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3532
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1264
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50027
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 388
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1498
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5341
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.023751023751024e-4
allele num: 9768
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502223290469895e-5
allele num: 66568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.21e-1

FS
type: SiteQuality
SIO_000300: 1.268e0

QD
type: SiteQuality
SIO_000300: 1.269e1

MQ
type: SiteQuality
SIO_000300: 5.989e1

DP
type: SiteQuality
SIO_000300: 5.011663e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

GenotypeDepth
all individuals: 508
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 271
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3532
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1893
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1955
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3505
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 983
bin: 4.25e1
variant carriers: 2

GenotypeDepth
all individuals: 1072
bin: 3.75e1
variant carriers: 2

GenotypeDepth
all individuals: 138
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2322
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22031
bin: 9.75e1
variant carriers: 15

GenotypeDepth
all individuals: 3613
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1263
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3758
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3912
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50033
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 406
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5270
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1491
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9766
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66564
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.252217227554368e-4
allele num: 16462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 15
allele frequency: 1.744997673336436e-3
allele num: 8596
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.08e0

DP
type: SiteQuality
SIO_000300: 5.011832e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.234e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.55e-2

QD
type: SiteQuality
SIO_000300: 1.463e1

MQ
type: SiteQuality
SIO_000300: 6.02e1

MQRankSum
type: SiteQuality
SIO_000300: 6.12e-1

GenotypeDepth
all individuals: 3532
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1864
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2859
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 987
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1105
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22028
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 1791
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 356
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1060
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 58
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3757
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3913
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1263
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3613
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3866
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50012
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 549
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1420
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4958
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 2
allele frequency: 2.232142857142857e-3
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66518
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.072511265874642e-4
allele num: 9764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.19e0

QD
type: SiteQuality
SIO_000300: 1.251e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.69e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.009263e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.620000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: -2.0e-3

GenotypeDepth
all individuals: 1105
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1058
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3868
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1846
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1263
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3759
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 152
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3419
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1856
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3533
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3615
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2859
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1791
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 984
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5014
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50025
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1425
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66520
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.080505898090721e-5
allele num: 16446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.16e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.596e0

FS
type: SiteQuality
SIO_000300: 8.8e-1

DP
type: SiteQuality
SIO_000300: 5.007081e6

QD
type: SiteQuality
SIO_000300: 1.269e1

VQSLOD
type: SiteQuality
SIO_000300: 2.37e0

GenotypeDepth
all individuals: 2323
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1729
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3759
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3615
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 495
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1263
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 774
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1062
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1791
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1820
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3869
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22017
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 986
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3533
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3914
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50025
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4683
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164144353899884e-4
allele num: 8590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.313e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.031e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.35e0

FS
type: SiteQuality
SIO_000300: 2.207e0

QD
type: SiteQuality
SIO_000300: 1.125e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e0

DP
type: SiteQuality
SIO_000300: 5.003781e6

MQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

MQ
type: SiteQuality
SIO_000300: 5.921e1

GenotypeDepth
all individuals: 3615
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3913
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 489
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1052
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2323
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1264
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1812
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3869
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3300
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2860
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1105
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3533
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22018
bin: 9.75e1
variant carriers: 19

GenotypeDepth
all individuals: 980
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4760
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1346
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50024
bin: 9.75e1
variant carriers: 19

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9764
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.104566910195123e-4
allele num: 66522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.053268765133172e-4
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

DP
type: SiteQuality
SIO_000300: 5.004694e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.31e0

FS
type: SiteQuality
SIO_000300: 1.0e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.872e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.12e-1

QD
type: SiteQuality
SIO_000300: 1.5e1

GenotypeDepth
all individuals: 1791
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1679
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3759
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3534
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1720
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 191
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1264
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 22009
bin: 9.75e1
variant carriers: 4

GenotypeDepth
all individuals: 3916
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3059
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 713
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2860
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 979
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1047
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4445
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1300
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50025
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 290
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.202898986557604e-4
allele num: 66506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: 4.6e-2

FS
type: SiteQuality
SIO_000300: 2.001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.98e0

QD
type: SiteQuality
SIO_000300: 1.457e1

DP
type: SiteQuality
SIO_000300: 4.997747e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.2e0

GenotypeDepth
all individuals: 1263
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 192
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1048
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1793
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3916
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1660
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2860
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 968
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3759
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3534
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2324
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3872
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 981
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1695
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 762
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 314
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1275
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4345
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50023
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 63
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503940323647958e-5
allele num: 66492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.345e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

DP
type: SiteQuality
SIO_000300: 4.99636e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

MQRankSum
type: SiteQuality
SIO_000300: 4.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.39e-1

QD
type: SiteQuality
SIO_000300: 1.226e1

MQ
type: SiteQuality
SIO_000300: 5.979e1

GenotypeDepth
all individuals: 1105
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3617
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 192
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3916
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22006
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1660
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3534
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1048
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3011
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1793
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1263
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3759
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1695
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3872
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2324
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1275
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4345
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50023
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 546
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164686699277894e-4
allele num: 8586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.9e-2

QD
type: SiteQuality
SIO_000300: 1.226e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.345e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

DP
type: SiteQuality
SIO_000300: 4.99636e6

MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.39e-1

GenotypeDepth
all individuals: 22005
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1793
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 70
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1018
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 864
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2860
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 206
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1042
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3916
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3873
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1648
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3617
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1104
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1656
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2906
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50023
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 479
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1278
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4279
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66490
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.096817461285209e-5
allele num: 16402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9746
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.401e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.02e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.993924e6

MQRankSum
type: SiteQuality
SIO_000300: -1.059e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.81e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.818e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

QD
type: SiteQuality
SIO_000300: 1.574e1

GenotypeDepth
all individuals: 2860
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3873
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3916
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1637
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3534
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22005
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 945
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1263
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 976
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3759
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2324
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1036
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1605
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3617
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4153
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50022
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 471
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1256
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.097560975609756e-5
allele num: 16400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9744
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.2e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

FS
type: SiteQuality
SIO_000300: 1.421e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

QD
type: SiteQuality
SIO_000300: 1.369e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e0

DP
type: SiteQuality
SIO_000300: 4.992612e6

GenotypeDepth
all individuals: 2324
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1597
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22004
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 74
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 218
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3873
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1182
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1793
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1468
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3617
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1104
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 975
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3759
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3535
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3917
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1250
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50021
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3877
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504347564461293e-5
allele num: 66474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.94e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

MQRankSum
type: SiteQuality
SIO_000300: -1.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.32e-1

FS
type: SiteQuality
SIO_000300: 1.705e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

DP
type: SiteQuality
SIO_000300: 4.989391e6

QD
type: SiteQuality
SIO_000300: 1.608e1

MQ
type: SiteQuality
SIO_000300: 5.911e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

GenotypeDepth
all individuals: 1951
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3917
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3759
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1263
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1103
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 975
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1660
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3617
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3873
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3534
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22004
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1006
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1793
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2325
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50019
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 838
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2483
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1058
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9746
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505162708088744e-5
allele num: 66438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.928e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

FS
type: SiteQuality
SIO_000300: 7.751e0

MQRankSum
type: SiteQuality
SIO_000300: 2.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

VQSLOD
type: SiteQuality
SIO_000300: -1.58e0

QD
type: SiteQuality
SIO_000300: 1.554e1

DP
type: SiteQuality
SIO_000300: 4.977792e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.535e0

GenotypeDepth
all individuals: 280
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1195
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12464
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2354
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 615
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19896
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7148
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12468
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3102
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5607
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2140
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16008
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3081
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8144
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2349
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1572
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2445
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6176
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1540
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6224
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1570
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 228
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.330303474563847e-5
allele num: 13642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7004
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50178
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5958
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7030
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5160
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.54e1

DP
type: SiteQuality
SIO_000300: 8.98392e5

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1238
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 164
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11039
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 382
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 615
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3491
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 12422
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 2083
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1935
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2439
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5458
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7195
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6287
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16659
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2248
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1305
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1674
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1982
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 230
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1094
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8098
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5148
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 7.941865544216336e-5
allele num: 50366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5978
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.16004e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.93e-1

QD
type: SiteQuality
SIO_000300: 1.579e1

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.084e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.203e0

FS
type: SiteQuality
SIO_000300: 1.0363e1

MQ
type: SiteQuality
SIO_000300: 5.931e1

GenotypeDepth
all individuals: 10442
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19642
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9222
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 164
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3774
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 623
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12319
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 14
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1280
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 383
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5208
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1172
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1874
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1777
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6190
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1728
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8981
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2393
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7963
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17380
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 169
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.979884374752514e-5
allele num: 50508
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.400952647800504e-4
allele num: 7138
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6942
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13752
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.609e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.642e0

DP
type: SiteQuality
SIO_000300: 9.2717e5

GenotypeDepth
all individuals: 10287
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 629
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 164
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1780
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9493
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4126
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 384
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1335
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 55
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19355
bin: 1.25e1
variant carriers: 3

GenotypeDepth
all individuals: 14
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 276
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17959
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1508
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4843
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1911
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1371
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7785
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2280
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6112
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10886
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7036
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6062
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.91529300418014e-5
allele num: 50716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.42149e5

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

FS
type: SiteQuality
SIO_000300: 1.067e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.086e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.5e-2

QD
type: SiteQuality
SIO_000300: 1.257e1

GenotypeDepth
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1688
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 19263
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 12062
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 281
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9648
bin: 1.75e1
variant carriers: 2

GenotypeDepth
all individuals: 639
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4256
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10160
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1378
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1796
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4990
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 821
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6207
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2328
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 899
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1788
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7938
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16981
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1565
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9006
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1602
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6742
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50228
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.9800796812749e-4
allele num: 6024
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.551e0

MQ
type: SiteQuality
SIO_000300: 5.871e1

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

QD
type: SiteQuality
SIO_000300: 9.630000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -1.043e0

DP
type: SiteQuality
SIO_000300: 9.4599e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.166e0

GenotypeDepth
all individuals: 11600
bin: 1.75e1
variant carriers: 577

GenotypeDepth
all individuals: 863
bin: 3.75e1
variant carriers: 39

GenotypeDepth
all individuals: 9784
bin: 2.25e1
variant carriers: 311

GenotypeDepth
all individuals: 1375
bin: 2.5e0
variant carriers: 12

GenotypeDepth
all individuals: 180
bin: 5.25e1
variant carriers: 16

GenotypeDepth
all individuals: 10455
bin: 7.5e0
variant carriers: 269

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 57
bin: 6.25e1
variant carriers: 7

GenotypeDepth
all individuals: 17634
bin: 1.25e1
variant carriers: 614

GenotypeDepth
all individuals: 1958
bin: 3.25e1
variant carriers: 74

GenotypeDepth
all individuals: 481
bin: 4.25e1
variant carriers: 37

GenotypeDepth
all individuals: 5309
bin: 2.75e1
variant carriers: 172

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 10
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 271
bin: 4.75e1
variant carriers: 21

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 6
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 282
bin: 8.25e1
variant carriers: 41

GenotypeQuality
all individuals: 1634
bin: 1.75e1
variant carriers: 31

GenotypeQuality
all individuals: 883
bin: 5.25e1
variant carriers: 53

GenotypeQuality
all individuals: 213
bin: 9.25e1
variant carriers: 58

GenotypeQuality
all individuals: 7302
bin: 2.5e0
variant carriers: 18

GenotypeQuality
all individuals: 2131
bin: 1.25e1
variant carriers: 36

GenotypeQuality
all individuals: 13696
bin: 2.25e1
variant carriers: 32

GenotypeQuality
all individuals: 404
bin: 7.25e1
variant carriers: 27

GenotypeQuality
all individuals: 3705
bin: 7.5e0
variant carriers: 28

GenotypeQuality
all individuals: 4041
bin: 3.75e1
variant carriers: 38

GenotypeQuality
all individuals: 409
bin: 7.75e1
variant carriers: 53

GenotypeQuality
all individuals: 1220
bin: 6.75e1
variant carriers: 63

GenotypeQuality
all individuals: 6170
bin: 3.25e1
variant carriers: 33

GenotypeQuality
all individuals: 2020
bin: 9.75e1
variant carriers: 1353

GenotypeQuality
all individuals: 501
bin: 5.75e1
variant carriers: 54

GenotypeQuality
all individuals: 5161
bin: 2.75e1
variant carriers: 32

GenotypeQuality
all individuals: 1564
bin: 4.75e1
variant carriers: 37

GenotypeQuality
all individuals: 201
bin: 8.75e1
variant carriers: 78

GenotypeQuality
all individuals: 6911
bin: 6.25e1
variant carriers: 59

GenotypeQuality
all individuals: 1692
bin: 4.25e1
variant carriers: 47

Other
type: Population
allele count: 9
allele frequency: 1.530612244897959e-2
allele num: 588
num of homozygotes: 0

East Asian
type: Population
allele count: 129
allele frequency: 2.590361445783133e-2
allele num: 4980
num of homozygotes: 2

South Asian
type: Population
allele count: 76
allele frequency: 6.681906101635308e-3
allele num: 11374
num of homozygotes: 0

African
type: Population
allele count: 782
allele frequency: 1.283650689428759e-1
allele num: 6092
num of homozygotes: 29

Latino
type: Population
allele count: 80
allele frequency: 1.433691756272401e-2
allele num: 5580
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 736
allele frequency: 1.772383566921928e-2
allele num: 41526
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 40
allele frequency: 8.956560680698611e-3
allele num: 4466
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

DP
type: SiteQuality
SIO_000300: 9.98874e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.859999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

QD
type: SiteQuality
SIO_000300: 7.83e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.48e-1

GenotypeDepth
all individuals: 33
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5309
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 271
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17634
bin: 1.25e1
variant carriers: 2

GenotypeDepth
all individuals: 863
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1958
bin: 3.25e1
variant carriers: 2

GenotypeDepth
all individuals: 1375
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 180
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 481
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9784
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1692
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1564
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4041
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2131
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3705
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1220
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6170
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1634
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7302
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13696
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6911
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 404
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2020
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 5161
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 282
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.816259692722631e-5
allele num: 41526
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 4.924491135915955e-4
allele num: 6092
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.791981712678038e-5
allele num: 11374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4980
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

QD
type: SiteQuality
SIO_000300: 7.83e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.48e-1

DP
type: SiteQuality
SIO_000300: 9.98874e5

VQSLOD
type: SiteQuality
SIO_000300: 3.77e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.859999999999999e-2

GenotypeDepth
all individuals: 9784
bin: 2.25e1
variant carriers: 26

GenotypeDepth
all individuals: 10455
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 271
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1958
bin: 3.25e1
variant carriers: 4

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11600
bin: 1.75e1
variant carriers: 26

GenotypeDepth
all individuals: 180
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5309
bin: 2.75e1
variant carriers: 14

GenotypeDepth
all individuals: 863
bin: 3.75e1
variant carriers: 4

GenotypeDepth
all individuals: 1375
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 481
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1634
bin: 1.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1220
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6911
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 501
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1692
bin: 4.25e1
variant carriers: 5

GenotypeQuality
all individuals: 4041
bin: 3.75e1
variant carriers: 3

GenotypeQuality
all individuals: 404
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13696
bin: 2.25e1
variant carriers: 7

GenotypeQuality
all individuals: 3705
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 2131
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 7302
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1564
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 409
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2020
bin: 9.75e1
variant carriers: 26

GenotypeQuality
all individuals: 5161
bin: 2.75e1
variant carriers: 7

GenotypeQuality
all individuals: 201
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6170
bin: 3.25e1
variant carriers: 8

East Asian
type: Population
allele count: 1
allele frequency: 2.008032128514056e-4
allele num: 4980
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 4.816259692722632e-4
allele num: 41526
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 5.376344086021505e-4
allele num: 5580
num of homozygotes: 0

South Asian
type: Population
allele count: 40
allele frequency: 3.516792685071215e-3
allele num: 11374
num of homozygotes: 1

African
type: Population
allele count: 1
allele frequency: 1.641497045305318e-4
allele num: 6092
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.239140170174653e-4
allele num: 4466
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.83e0

MQRankSum
type: SiteQuality
SIO_000300: 3.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.77e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

DP
type: SiteQuality
SIO_000300: 9.98874e5

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.859999999999999e-2

GenotypeDepth
all individuals: 3
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16909
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1317
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 11513
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10153
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 197
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 113
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 489
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10056
bin: 2.25e1
variant carriers: 2

GenotypeDepth
all individuals: 2056
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9482
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2109
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1149
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6857
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6048
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1657
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5021
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3954
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1747
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3469
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 861
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13298
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1520
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5386
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.074410163339382e-5
allele num: 11020
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4304
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4514
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.818181818181818e-3
allele num: 550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4604
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.9e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.096e0

QD
type: SiteQuality
SIO_000300: 7.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e0

DP
type: SiteQuality
SIO_000300: 1.012825e6

MQ
type: SiteQuality
SIO_000300: 5.899e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-2

GenotypeDepth
all individuals: 784
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11380
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 10306
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5675
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 249
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10479
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 418
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17056
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 81
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 174
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14546
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1862
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2046
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2532
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1645
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4924
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2801
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1483
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5658
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9183
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1964
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7079
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7028
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 672
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.061345646437995e-5
allele num: 48512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12958
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6964
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5026
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.63e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.18e0

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

QD
type: SiteQuality
SIO_000300: 1.876e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 1.007751e6

GenotypeDepth
all individuals: 1290
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10259
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10663
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 385
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5863
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 145
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 755
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 243
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17067
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14328
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1978
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7501
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 887
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9202
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 842
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5383
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1816
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1796
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2392
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1859
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5800
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 967
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2486
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7916
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7408
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.523461304082876e-4
allele num: 6564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14162
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

FS
type: SiteQuality
SIO_000300: 1.2091e1

DP
type: SiteQuality
SIO_000300: 1.009102e6

VQSLOD
type: SiteQuality
SIO_000300: -1.5e0

QD
type: SiteQuality
SIO_000300: 1.792e1

MQ
type: SiteQuality
SIO_000300: 5.917e1

GenotypeDepth
all individuals: 10
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11167
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 146
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2093
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10220
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 383
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 240
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16852
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 746
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14812
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1242
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2411
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2465
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7305
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5658
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1931
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5221
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10942
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.339764201500536e-4
allele num: 7464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8008
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14282
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.018318e6

QD
type: SiteQuality
SIO_000300: 1.704e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.82e-1

MQ
type: SiteQuality
SIO_000300: 5.92e1

VQSLOD
type: SiteQuality
SIO_000300: 4.09e-1

GenotypeDepth
all individuals: 10212
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16698
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 46
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 386
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1148
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 740
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6318
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 10612
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 11428
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2127
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5601
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1913
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1130
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1449
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7225
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2502
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1728
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2332
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 856
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5140
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 11547
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14862
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5460
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.50105073551486e-4
allele num: 6662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8078
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53276
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.39314572304263e-4
allele num: 14356
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.67e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

QD
type: SiteQuality
SIO_000300: 2.011e1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.73e-1

DP
type: SiteQuality
SIO_000300: 1.023152e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e-1

FS
type: SiteQuality
SIO_000300: 2.899e0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10212
bin: 7.5e0
variant carriers: 6

GenotypeDepth
all individuals: 46
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 386
bin: 4.25e1
variant carriers: 2

GenotypeDepth
all individuals: 11428
bin: 2.25e1
variant carriers: 8

GenotypeDepth
all individuals: 1148
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 10612
bin: 1.75e1
variant carriers: 16

GenotypeDepth
all individuals: 237
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 32
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 16698
bin: 1.25e1
variant carriers: 16

GenotypeDepth
all individuals: 2127
bin: 3.25e1
variant carriers: 6

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 740
bin: 3.75e1
variant carriers: 3

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7225
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11547
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2332
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 9.75e1
variant carriers: 71

GenotypeQuality
all individuals: 856
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5601
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1130
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14862
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1728
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2502
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1449
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1913
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5140
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 55
allele frequency: 7.321618743343983e-3
allele num: 7512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6662
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 9.903441445902451e-4
allele num: 8078
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 7.508071176514753e-5
allele num: 53276
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.899e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.67e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.023152e6

MQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

QD
type: SiteQuality
SIO_000300: 2.011e1

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 386
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6318
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2127
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11428
bin: 2.25e1
variant carriers: 2

GenotypeDepth
all individuals: 46
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1148
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 740
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10612
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 237
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1913
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5601
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1449
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7225
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2332
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 387
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1130
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1728
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 710
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 856
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11547
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2502
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5140
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14862
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5460
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.965728615213152e-5
allele num: 14356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8078
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.877017794128688e-5
allele num: 53276
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.67e-2

DP
type: SiteQuality
SIO_000300: 1.023152e6

FS
type: SiteQuality
SIO_000300: 2.899e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e-1

QD
type: SiteQuality
SIO_000300: 2.011e1

GenotypeDepth
all individuals: 1052
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 16295
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 240
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12025
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2175
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6574
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10423
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 9
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 726
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 143
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14610
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5377
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6971
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2250
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1457
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12078
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5006
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2482
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1931
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.883310105842028e-5
allele num: 53098
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7924
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5450
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.57e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

FS
type: SiteQuality
SIO_000300: 1.858e0

MQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

QD
type: SiteQuality
SIO_000300: 1.151e1

DP
type: SiteQuality
SIO_000300: 1.034802e6

MQ
type: SiteQuality
SIO_000300: 5.914e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.237e0

VQSLOD
type: SiteQuality
SIO_000300: 2.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

GenotypeDepth
all individuals: 1052
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 726
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16295
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12025
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 240
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6574
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10038
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10423
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 33
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2175
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2250
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12078
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6971
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2482
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14610
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5377
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1931
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5006
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1457
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.883310105842028e-5
allele num: 53098
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7924
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

QD
type: SiteQuality
SIO_000300: 1.151e1

MQ
type: SiteQuality
SIO_000300: 5.914e1

FS
type: SiteQuality
SIO_000300: 1.858e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.237e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.57e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

DP
type: SiteQuality
SIO_000300: 1.034802e6

GenotypeDepth
all individuals: 10423
bin: 1.75e1
variant carriers: 4

GenotypeDepth
all individuals: 16295
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12025
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 33
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 143
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10038
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6574
bin: 2.75e1
variant carriers: 2

GenotypeDepth
all individuals: 2175
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 45
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 240
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 726
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 756
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1457
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5006
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12078
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6971
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14610
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1931
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 5377
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1731
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2482
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2250
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.649930317526084e-5
allele num: 53098
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7924
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.336898395721925e-4
allele num: 7480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5450
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 6.036824630244491e-4
allele num: 6626
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.151e1

VQSLOD
type: SiteQuality
SIO_000300: 2.82e0

DP
type: SiteQuality
SIO_000300: 1.034802e6

FS
type: SiteQuality
SIO_000300: 1.858e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

MQ
type: SiteQuality
SIO_000300: 5.914e1

MQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.237e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.57e-2

GenotypeDepth
all individuals: 725
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10172
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 996
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 235
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 390
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6745
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12555
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9977
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2173
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 78
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4865
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6751
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 768
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12389
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2577
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14219
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2151
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1138
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1502
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1031
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1903
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1484
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5228
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52962
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.510574018126888e-4
allele num: 6620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7912
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7330
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.47e-1

MQ
type: SiteQuality
SIO_000300: 5.993e1

QD
type: SiteQuality
SIO_000300: 3.88e0

DP
type: SiteQuality
SIO_000300: 1.04227e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.82e-1

GenotypeDepth
all individuals: 235
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12555
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 725
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 45
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 996
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6745
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2173
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 144
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10172
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 33
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9977
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 78
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 390
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1138
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1502
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1031
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2151
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2577
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14219
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12389
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6751
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5228
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1484
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1903
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4865
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.065140596297866e-5
allele num: 14154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7912
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.888146218043125e-5
allele num: 52962
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5404
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

FS
type: SiteQuality
SIO_000300: 1.81e0

QD
type: SiteQuality
SIO_000300: 3.88e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.82e-1

MQ
type: SiteQuality
SIO_000300: 5.993e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.4e-3

DP
type: SiteQuality
SIO_000300: 1.04227e6

GenotypeDepth
all individuals: 16
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 9
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7112
bin: 2.75e1
variant carriers: 11

GenotypeDepth
all individuals: 377
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 140
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2173
bin: 3.25e1
variant carriers: 6

GenotypeDepth
all individuals: 949
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 717
bin: 3.75e1
variant carriers: 7

GenotypeDepth
all individuals: 9839
bin: 7.5e0
variant carriers: 5

GenotypeDepth
all individuals: 13286
bin: 2.25e1
variant carriers: 12

GenotypeDepth
all individuals: 15686
bin: 1.25e1
variant carriers: 17