1-47400808-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400808
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400808
    reference: chr 1
allele count: 58
allele frequency: 4.79965574882905e-4
allele num: 120842
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+414A>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.654A>C
  hgvsp: ENST00000371904.4:c.654A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.654A>C
  hgvsp: ENST00000310638.4:c.654A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+387A>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+387A>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-78A>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+387A>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+387A>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.654A>C
  hgvsp: ENST00000371905.1:c.654A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 9.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7479
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6086
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5193
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6803
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4651
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile218Ile
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

1-47400832-GGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400832
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400830
    reference: chr 1
allele count: 2
allele frequency: 1.671877351077525e-5
allele num: 119626
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-8_636-7delTC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-8_636-7delTC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-8_636-7delTC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-104_636-103delTC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+361_635+362delTC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+388_608+389delTC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+361_323+362delTC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+361_635+362delTC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+361_635+362delTC
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6095
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4659
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1622
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 3.25e1
  variant carriers: 0
hgvs: c.636-8_636-7delTC
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: GGA
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ

1-47400835-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400835
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400835
    reference: chr 1
allele count: 1
allele frequency: 8.371983992766606e-6
allele num: 119446
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-9C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+360C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+360C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+387C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+360C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-105C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-9C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-9C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+360C>A
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6095
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4659
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5195
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40685
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4616
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1851
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

1-47400839-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400839
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400839
    reference: chr 1
allele count: 2
allele frequency: 1.676221127091086e-5
allele num: 119316
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+356T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+356T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+383T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-13T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-13T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+356T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+356T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-109T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-13T>C
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4659
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6096
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7485
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40687
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2091
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP

1-47400847-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400847
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400847
    reference: chr 1
allele count: 1
allele frequency: 8.404915194405689e-6
allele num: 118978
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+348C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+375C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-21C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-117C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-21C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+348C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+348C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-21C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+348C>T
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6096
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4659
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7298
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1125
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40688
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

1-47400848-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400848
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400848
    reference: chr 1
allele count: 2
allele frequency: 1.681633202165944e-5
allele num: 118932
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-22C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+347C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-118C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+347C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+347C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-22C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+347C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+374C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-22C>T
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4659
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6096
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2039
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3037
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/1-47400851-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400851
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400851
    reference: chr 1
allele count: 2
allele frequency: 1.684125433662299e-5
allele num: 118756
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+344G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+344G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-121G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+344G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-25G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-25G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+344G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-25G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+371G>T
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3833
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7485
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7298
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6096
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4659
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

1-47400852-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400852
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400852
    reference: chr 1
allele count: 9
allele frequency: 7.579457984537905e-5
allele num: 118742
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+343A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+343A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+370A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-26A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+343A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-26A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+343A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-122A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-26A>G
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7485
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3832
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6097
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4658
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2438
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2041
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

1-47400857-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400857
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400857
    reference: chr 1
allele count: 467
allele frequency: 3.945456388766855e-3
allele num: 118364
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+338A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-31A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+338A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+338A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+365A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-31A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-31A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-127A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+338A>G
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 9.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 7475
  bin: 4.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 6.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 7292
  bin: 5.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 8.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 6082
  bin: 5.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 8.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 7.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 4.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 9.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 3796
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5177
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 4651
  bin: 6.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 7.25e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 3029
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2032
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

1-47400857-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400857
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400858
    reference: chr 1
allele count: 1
allele frequency: 8.448514751106756e-6
allele num: 118364
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-32dupT
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-32dupT
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+337dupT
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+337dupT
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+364dupT
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-32dupT
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+337dupT
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+337dupT
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-128dupT
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6082
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1530
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7475
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4651
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7292
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3796
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2424
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2032
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1107
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

1-47400859-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400859
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400859
    reference: chr 1
allele count: 1
allele frequency: 8.45394291897741e-6
allele num: 118288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+336C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+336C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+336C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+336C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-129C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-33C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-33C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+363C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-33C>T
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7513
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4645
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6836
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1784
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2378
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum

1-47400860-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400860
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400860
    reference: chr 1
allele count: 2
allele frequency: 1.691417746354995e-5
allele num: 118244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+335C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-34C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+362C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-34C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-34C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+335C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+335C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+335C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-130C>T
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6838
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7512
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4645
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6099
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2043
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2838
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

1-47400860-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400860
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400860
    reference: chr 1
allele count: 1
allele frequency: 8.457088731774973e-6
allele num: 118244
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-34C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+335C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-130C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+335C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+335C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-34C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+335C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+362C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-34C>A
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6838
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4645
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6099
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1115
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40593
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2043
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ

1-47400863-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400863
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400862
    reference: chr 1
allele count: 3
allele frequency: 2.540779511154022e-5
allele num: 118074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+331delC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-38delC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+358delC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+331delC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+331delC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-38delC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+331delC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-134delC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-38delC
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7512
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6099
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7309
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3784
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3046
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: TG
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

1-47400866-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400866
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400866
    reference: chr 1
allele count: 46
allele frequency: 3.910766510236006e-4
allele num: 117624
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+329C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+329C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+329C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-136C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-40C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+329C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-40C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-40C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+356C>T
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7507
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3731
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5171
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6097
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6835
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 7306
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2216
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1614
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

1-47400866-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400866
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400866
    reference: chr 1
allele count: 2
allele frequency: 1.700333265320003e-5
allele num: 117624
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-40C>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+329C>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-40C>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+329C>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+356C>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+329C>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-136C>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+329C>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-40C>G
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3731
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5171
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7306
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6097
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6835
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7507
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1722
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2432
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3039
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

1-47400868-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400868
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400868
    reference: chr 1
allele count: 3
allele frequency: 2.553756575923183e-5
allele num: 117474
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+327G>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+354G>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-42G>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+327G>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-138G>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+327G>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-42G>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-42G>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+327G>C
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7304
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7501
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6096
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2019
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40553
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

1-47400868-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400868
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400868
    reference: chr 1
allele count: 1
allele frequency: 8.512521919743944e-6
allele num: 117474
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-42G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+327G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-138G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+354G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+327G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-42G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+327G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+327G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-42G>A
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7501
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6096
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7304
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2289
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD

1-47400870-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400870
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400870
    reference: chr 1
allele count: 1
allele frequency: 8.523114687031229e-6
allele num: 117328
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+352T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+325T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+325T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-44T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+325T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-44T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-44T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-140T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+325T>C
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6094
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5120
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7304
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7494
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2034
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40548
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1618
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

1-47400876-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400876
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400876
    reference: chr 1
allele count: 4
allele frequency: 3.422137809489588e-5
allele num: 116886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+319G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+346G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-50G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+319G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-146G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+319G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+319G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-50G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-50G>A
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7303
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6783
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5056
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6093
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

1-47400877-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400877
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400877
    reference: chr 1
allele count: 2
allele frequency: 1.71051281174096e-5
allele num: 116924
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+318C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+318C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-51C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-147C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-51C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+318C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+345C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+318C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-51C>T
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6090
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6775
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1587
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

1-47400878-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47400878
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47400878
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 116788
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+317C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.636-52C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+317C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+317C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.636-52C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.636-148C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.636-52C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+317C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+344C>T
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6089
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5053
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4646
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1743
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

1-47401144-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401144
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401144
    reference: chr 1
allele count: 180
allele frequency: 1.780943900267142e-3
allele num: 101070
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+51G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.635+51G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.635+51G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.635+51G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.635+51G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+51G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+51G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+51G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+78G>A
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3471
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6350
  bin: 2.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12570
  bin: 2.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 15511
  bin: 1.75e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10663
  bin: 1.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 6196
  bin: 7.5e0
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4751
  bin: 5.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 4300
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3930
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3161
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 2.5e0
  variant carriers: 1
num of homozygotes: 1
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/1-47401146-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401146
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401146
    reference: chr 1
allele count: 3
allele frequency: 2.962670353545329e-5
allele num: 101260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.635+49G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+49G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+49G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.635+49G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+76G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.635+49G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+49G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+49G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.635+49G>T
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 13190
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14891
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10648
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3483
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2544
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3190
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2432
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5777
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

1-47401146-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401146
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401146
    reference: chr 1
allele count: 1
allele frequency: 9.875567845151096e-6
allele num: 101260
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.635+49G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+49G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+49G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+49G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+76G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.635+49G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.635+49G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+49G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.635+49G>A
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 14891
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13190
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6365
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3483
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10648
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1831
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5342
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5777
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3190
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2432
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

1-47401154-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401154
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401154
    reference: chr 1
allele count: 1
allele frequency: 9.87049905243209e-6
allele num: 101312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.635+41C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.635+41C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.635+41C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+41C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+41C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+68C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+41C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+41C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.635+41C>T
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11994
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3041
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2398
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3291
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

1-47401164-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401164
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401163
    reference: chr 1
allele count: 2
allele frequency: 1.920344125667319e-5
allele num: 104148
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+30delC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.635+30delC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+30delC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.635+30delC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+57delC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.635+30delC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.635+30delC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+30delC
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+30delC
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6857
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32082
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1619
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3937
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9052
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1853
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: AG
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

1-47401167-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401167
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401167
    reference: chr 1
allele count: 1
allele frequency: 9.455549461979235e-6
allele num: 105758
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+28C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+28C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.635+28C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+55C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.635+28C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+28C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.635+28C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+28C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.635+28C>T
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6548
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1972
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6386
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

1-47401169-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401169
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401169
    reference: chr 1
allele count: 2
allele frequency: 1.869298639150591e-5
allele num: 106992
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.635+26G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+26G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+26G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+53G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.635+26G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+26G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.635+26G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.635+26G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+26G>A
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33882
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3371
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7043
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

1-47401179-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401179
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401179
    reference: chr 1
allele count: 2
allele frequency: 1.768565516509559e-5
allele num: 113086
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.635+16C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+16C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+16C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.635+16C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+43C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+16C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.635+16C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+16C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.635+16C>T
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10623
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

1-47401182-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401182
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401182
    reference: chr 1
allele count: 1
allele frequency: 8.736065974770241e-6
allele num: 114468
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+13C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+13C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+13C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.635+13C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.635+13C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+40C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.635+13C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.635+13C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+13C>T
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10776
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2899
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP

1-47401191-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401191
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401191
    reference: chr 1
allele count: 3
allele frequency: 2.521813688404701e-5
allele num: 118962
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.635+4A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+4A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.635+4A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+4A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+31A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+4A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+4A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.635+4A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.635+4A>G
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40808
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3396
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 7724
  bin: 6.75e1
  variant carriers: 0
hgvs: c.635+4A>G
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum

1-47401192-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401192
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401192
    reference: chr 1
allele count: 1
allele frequency: 8.377454594196099e-6
allele num: 119368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.635+3C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.635+3C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.635+3C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.635+3C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.323+3C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.635+3C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.635+3C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+30C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.635+3C>T
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11435
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
hgvs: c.635+3C>T
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-47401199-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401199
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401199
    reference: chr 1
allele count: 3
allele frequency: 2.486325211337643e-5
allele num: 120660
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.631G>T
  hgvsp: ENSP00000360971.4:p.Asp211Tyr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+23G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.631G>T
  hgvsp: ENSP00000476988.1:p.Asp211Tyr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.631G>T
  hgvsp: ENSP00000477495.1:p.Asp211Tyr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.319G>T
  hgvsp: ENSP00000406272.2:p.Asp107Tyr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.631G>T
  hgvsp: ENSP00000311095.4:p.Asp211Tyr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.631G>T
  hgvsp: ENSP00000360972.1:p.Asp211Tyr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.631G>T
  hgvsp: ENSP00000476854.1:p.Asp211Tyr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.631G>T
  hgvsp: ENSP00000476619.1:p.Asp211Tyr
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41369
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11637
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2160
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp211Tyr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

1-47401199-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401199
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401199
    reference: chr 1
allele count: 20
allele frequency: 1.657550140891762e-4
allele num: 120660
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.631G>A
  hgvsp: ENSP00000477495.1:p.Asp211Asn
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.631G>A
  hgvsp: ENSP00000476619.1:p.Asp211Asn
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.631G>A
  hgvsp: ENSP00000476854.1:p.Asp211Asn
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.631G>A
  hgvsp: ENSP00000360972.1:p.Asp211Asn
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+23G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.631G>A
  hgvsp: ENSP00000476988.1:p.Asp211Asn
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.319G>A
  hgvsp: ENSP00000406272.2:p.Asp107Asn
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.631G>A
  hgvsp: ENSP00000311095.4:p.Asp211Asn
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.631G>A
  hgvsp: ENSP00000360971.4:p.Asp211Asn
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11637
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41369
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp211Asn
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/1-47401202-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401202
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401202
    reference: chr 1
allele count: 1
allele frequency: 8.268152729317216e-6
allele num: 120946
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.628G>T
  hgvsp: ENSP00000476854.1:p.Val210Leu
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.628G>T
  hgvsp: ENSP00000477495.1:p.Val210Leu
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.316G>T
  hgvsp: ENSP00000406272.2:p.Val106Leu
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.628G>T
  hgvsp: ENSP00000360971.4:p.Val210Leu
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.628G>T
  hgvsp: ENSP00000476988.1:p.Val210Leu
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.628G>T
  hgvsp: ENSP00000360972.1:p.Val210Leu
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.628G>T
  hgvsp: ENSP00000476619.1:p.Val210Leu
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+20G>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.628G>T
  hgvsp: ENSP00000311095.4:p.Val210Leu
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3535
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41451
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11699
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val210Leu
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

1-47401208-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401208
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401208
    reference: chr 1
allele count: 1
allele frequency: 8.247558722618106e-6
allele num: 121248
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.310A>C
  hgvsp: ENSP00000406272.2:p.Ile104Leu
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.622A>C
  hgvsp: ENSP00000476619.1:p.Ile208Leu
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+14A>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.622A>C
  hgvsp: ENSP00000311095.4:p.Ile208Leu
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.622A>C
  hgvsp: ENSP00000360972.1:p.Ile208Leu
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.622A>C
  hgvsp: ENSP00000477495.1:p.Ile208Leu
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.622A>C
  hgvsp: ENSP00000360971.4:p.Ile208Leu
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.622A>C
  hgvsp: ENSP00000476988.1:p.Ile208Leu
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.622A>C
  hgvsp: ENSP00000476854.1:p.Ile208Leu
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11758
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7921
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ile208Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

1-47401209-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401209
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401209
    reference: chr 1
allele count: 3
allele frequency: 2.474022761009401e-5
allele num: 121260
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+13C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.621C>T
  hgvsp: ENST00000310638.4:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.621C>T
  hgvsp: ENST00000371904.4:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.621C>T
  hgvsp: ENST00000474458.1:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.621C>T
  hgvsp: ENST00000371905.1:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.621C>T
  hgvsp: ENST00000475477.1:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.621C>T
  hgvsp: ENST00000462347.1:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.621C>T
  hgvsp: ENST00000468629.1:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.309C>T
  hgvsp: ENST00000457840.2:c.309C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser207Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

1-47401212-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401212
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401212
    reference: chr 1
allele count: 8
allele frequency: 6.594892255947769e-5
allele num: 121306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.618C>A
  hgvsp: ENST00000475477.1:c.618C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.618C>A
  hgvsp: ENST00000462347.1:c.618C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.306C>A
  hgvsp: ENST00000457840.2:c.306C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.618C>A
  hgvsp: ENST00000310638.4:c.618C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+10C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.618C>A
  hgvsp: ENST00000371905.1:c.618C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.618C>A
  hgvsp: ENST00000468629.1:c.618C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.618C>A
  hgvsp: ENST00000371904.4:c.618C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.618C>A
  hgvsp: ENST00000474458.1:c.618C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1407
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly206Gly
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

1-47401213-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401213
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401213
    reference: chr 1
allele count: 10
allele frequency: 8.242528148233626e-5
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+9G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.617G>A
  hgvsp: ENSP00000476619.1:p.Gly206Asp
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.617G>A
  hgvsp: ENSP00000476854.1:p.Gly206Asp
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.617G>A
  hgvsp: ENSP00000477495.1:p.Gly206Asp
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.617G>A
  hgvsp: ENSP00000360972.1:p.Gly206Asp
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.617G>A
  hgvsp: ENSP00000476988.1:p.Gly206Asp
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.617G>A
  hgvsp: ENSP00000360971.4:p.Gly206Asp
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.305G>A
  hgvsp: ENSP00000406272.2:p.Gly102Asp
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.617G>A
  hgvsp: ENSP00000311095.4:p.Gly206Asp
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2180
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly206Asp
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

1-47401214-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401214
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401214
    reference: chr 1
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.616G>A
  hgvsp: ENSP00000476988.1:p.Gly206Ser
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+8G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.616G>A
  hgvsp: ENSP00000477495.1:p.Gly206Ser
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.616G>A
  hgvsp: ENSP00000476854.1:p.Gly206Ser
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.616G>A
  hgvsp: ENSP00000360971.4:p.Gly206Ser
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.616G>A
  hgvsp: ENSP00000360972.1:p.Gly206Ser
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.616G>A
  hgvsp: ENSP00000311095.4:p.Gly206Ser
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.304G>A
  hgvsp: ENSP00000406272.2:p.Gly102Ser
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.616G>A
  hgvsp: ENSP00000476619.1:p.Gly206Ser
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42122
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly206Ser
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

1-47401216-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401216
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401216
    reference: chr 1
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.614A>G
  hgvsp: ENSP00000311095.4:p.Gln205Arg
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.614A>G
  hgvsp: ENSP00000477495.1:p.Gln205Arg
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.614A>G
  hgvsp: ENSP00000476988.1:p.Gln205Arg
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.614A>G
  hgvsp: ENSP00000360971.4:p.Gln205Arg
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.614A>G
  hgvsp: ENSP00000476619.1:p.Gln205Arg
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.302A>G
  hgvsp: ENSP00000406272.2:p.Gln101Arg
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.608+6A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.614A>G
  hgvsp: ENSP00000476854.1:p.Gln205Arg
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.614A>G
  hgvsp: ENSP00000360972.1:p.Gln205Arg
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2182
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln205Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP

1-47401227-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401227
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401227
    reference: chr 1
allele count: 3
allele frequency: 2.471251112063001e-5
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.603C>T
  hgvsp: ENST00000371905.1:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.603C>T
  hgvsp: ENST00000462347.1:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.603C>T
  hgvsp: ENST00000474458.1:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.603C>T
  hgvsp: ENST00000465874.1:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.291C>T
  hgvsp: ENST00000457840.2:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.603C>T
  hgvsp: ENST00000475477.1:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.603C>T
  hgvsp: ENST00000371904.4:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.603C>T
  hgvsp: ENST00000468629.1:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.603C>T
  hgvsp: ENST00000310638.4:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2181
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala201Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-47401229-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401229
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401229
    reference: chr 1
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.601G>A
  hgvsp: ENSP00000476854.1:p.Ala201Thr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.601G>A
  hgvsp: ENSP00000476619.1:p.Ala201Thr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.601G>A
  hgvsp: ENSP00000360972.1:p.Ala201Thr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.601G>A
  hgvsp: ENSP00000360971.4:p.Ala201Thr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.601G>A
  hgvsp: ENSP00000311095.4:p.Ala201Thr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.289G>A
  hgvsp: ENSP00000406272.2:p.Ala97Thr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.601G>A
  hgvsp: ENSP00000476988.1:p.Ala201Thr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.601G>A
  hgvsp: ENSP00000477495.1:p.Ala201Thr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.601G>A
  hgvsp: ENSP00000476368.1:p.Ala201Thr
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11815
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala201Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

1-47401231-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401231
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401231
    reference: chr 1
allele count: 2
allele frequency: 1.647527884409444e-5
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.599G>A
  hgvsp: ENSP00000476368.1:p.Cys200Tyr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.599G>A
  hgvsp: ENSP00000360972.1:p.Cys200Tyr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.599G>A
  hgvsp: ENSP00000476988.1:p.Cys200Tyr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.599G>A
  hgvsp: ENSP00000311095.4:p.Cys200Tyr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.599G>A
  hgvsp: ENSP00000476619.1:p.Cys200Tyr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.599G>A
  hgvsp: ENSP00000477495.1:p.Cys200Tyr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.599G>A
  hgvsp: ENSP00000476854.1:p.Cys200Tyr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.287G>A
  hgvsp: ENSP00000406272.2:p.Cys96Tyr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.599G>A
  hgvsp: ENSP00000360971.4:p.Cys200Tyr
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11819
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2370
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Cys200Tyr
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-47401232-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401232
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401232
    reference: chr 1
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.598T>A
  hgvsp: ENSP00000360971.4:p.Cys200Ser
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.598T>A
  hgvsp: ENSP00000476854.1:p.Cys200Ser
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.286T>A
  hgvsp: ENSP00000406272.2:p.Cys96Ser
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.598T>A
  hgvsp: ENSP00000477495.1:p.Cys200Ser
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.598T>A
  hgvsp: ENSP00000476619.1:p.Cys200Ser
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.598T>A
  hgvsp: ENSP00000476988.1:p.Cys200Ser
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.598T>A
  hgvsp: ENSP00000360972.1:p.Cys200Ser
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.598T>A
  hgvsp: ENSP00000311095.4:p.Cys200Ser
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.598T>A
  hgvsp: ENSP00000476368.1:p.Cys200Ser
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Cys200Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-47401240-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401240
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401240
    reference: chr 1
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.590T>C
  hgvsp: ENSP00000360972.1:p.Ile197Thr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.590T>C
  hgvsp: ENSP00000476988.1:p.Ile197Thr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.590T>C
  hgvsp: ENSP00000477495.1:p.Ile197Thr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.590T>C
  hgvsp: ENSP00000476854.1:p.Ile197Thr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.590T>C
  hgvsp: ENSP00000360971.4:p.Ile197Thr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.278T>C
  hgvsp: ENSP00000406272.2:p.Ile93Thr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.590T>C
  hgvsp: ENSP00000476619.1:p.Ile197Thr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.590T>C
  hgvsp: ENSP00000476368.1:p.Ile197Thr
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.590T>C
  hgvsp: ENSP00000311095.4:p.Ile197Thr
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2370
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile197Thr
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-47401245-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401245
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401245
    reference: chr 1
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.585C>T
  hgvsp: ENST00000468629.1:c.585C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.273C>T
  hgvsp: ENST00000457840.2:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.585C>T
  hgvsp: ENST00000475477.1:c.585C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.585C>T
  hgvsp: ENST00000371904.4:c.585C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.585C>T
  hgvsp: ENST00000474458.1:c.585C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.585C>T
  hgvsp: ENST00000371905.1:c.585C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.585C>T
  hgvsp: ENST00000310638.4:c.585C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.585C>T
  hgvsp: ENST00000465874.1:c.585C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.585C>T
  hgvsp: ENST00000462347.1:c.585C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3614
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp195Asp
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-47401254-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401254
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401254
    reference: chr 1
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.576G>T
  hgvsp: ENSP00000476854.1:p.Met192Ile
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.576G>T
  hgvsp: ENSP00000477495.1:p.Met192Ile
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.264G>T
  hgvsp: ENSP00000406272.2:p.Met88Ile
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.576G>T
  hgvsp: ENSP00000476988.1:p.Met192Ile
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.576G>T
  hgvsp: ENSP00000476368.1:p.Met192Ile
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.576G>T
  hgvsp: ENSP00000476619.1:p.Met192Ile
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.576G>T
  hgvsp: ENSP00000360971.4:p.Met192Ile
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.576G>T
  hgvsp: ENSP00000311095.4:p.Met192Ile
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.576G>T
  hgvsp: ENSP00000360972.1:p.Met192Ile
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11827
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2367
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met192Ile
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum

1-47401259-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401259
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401259
    reference: chr 1
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.571T>C
  hgvsp: ENST00000371905.1:c.571T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.571T>C
  hgvsp: ENST00000474458.1:c.571T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.571T>C
  hgvsp: ENST00000371904.4:c.571T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.571T>C
  hgvsp: ENST00000475477.1:c.571T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.259T>C
  hgvsp: ENST00000457840.2:c.259T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.571T>C
  hgvsp: ENST00000468629.1:c.571T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.571T>C
  hgvsp: ENST00000465874.1:c.571T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.571T>C
  hgvsp: ENST00000462347.1:c.571T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.571T>C
  hgvsp: ENST00000310638.4:c.571T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42105
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu191Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

1-47401261-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401261
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401261
    reference: chr 1
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.569C>T
  hgvsp: ENSP00000477495.1:p.Ser190Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.569C>T
  hgvsp: ENSP00000360971.4:p.Ser190Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.569C>T
  hgvsp: ENSP00000476988.1:p.Ser190Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.569C>T
  hgvsp: ENSP00000476854.1:p.Ser190Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.569C>T
  hgvsp: ENSP00000476619.1:p.Ser190Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.569C>T
  hgvsp: ENSP00000360972.1:p.Ser190Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.569C>T
  hgvsp: ENSP00000476368.1:p.Ser190Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.569C>T
  hgvsp: ENSP00000311095.4:p.Ser190Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.257C>T
  hgvsp: ENSP00000406272.2:p.Ser86Phe
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42058
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser190Phe
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

1-47401265-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401265
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401265
    reference: chr 1
allele count: 7
allele frequency: 5.768343331795108e-5
allele num: 121352
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.565G>A
  hgvsp: ENSP00000311095.4:p.Val189Ile
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.565G>A
  hgvsp: ENSP00000476988.1:p.Val189Ile
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.253G>A
  hgvsp: ENSP00000406272.2:p.Val85Ile
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.565G>A
  hgvsp: ENSP00000360972.1:p.Val189Ile
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.565G>A
  hgvsp: ENSP00000476368.1:p.Val189Ile
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.565G>A
  hgvsp: ENSP00000477495.1:p.Val189Ile
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.565G>A
  hgvsp: ENSP00000360971.4:p.Val189Ile
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.565G>A
  hgvsp: ENSP00000476619.1:p.Val189Ile
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.565G>A
  hgvsp: ENSP00000476854.1:p.Val189Ile
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41355
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val189Ile
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP

1-47401266-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401266
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401266
    reference: chr 1
allele count: 4
allele frequency: 3.296359171295305e-5
allele num: 121346
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.564C>T
  hgvsp: ENST00000474458.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.252C>T
  hgvsp: ENST00000457840.2:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.564C>T
  hgvsp: ENST00000475477.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.564C>T
  hgvsp: ENST00000465874.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.564C>T
  hgvsp: ENST00000310638.4:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.564C>T
  hgvsp: ENST00000462347.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.564C>T
  hgvsp: ENST00000371905.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.564C>T
  hgvsp: ENST00000371904.4:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.564C>T
  hgvsp: ENST00000468629.1:c.564C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41324
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1409
  bin: 8.25e1
  variant carriers: 0
hgvs: p.His188His
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

1-47401267-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401267
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401267
    reference: chr 1
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.563A>G
  hgvsp: ENSP00000476988.1:p.His188Arg
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.563A>G
  hgvsp: ENSP00000360972.1:p.His188Arg
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.563A>G
  hgvsp: ENSP00000476854.1:p.His188Arg
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.563A>G
  hgvsp: ENSP00000311095.4:p.His188Arg
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.563A>G
  hgvsp: ENSP00000476619.1:p.His188Arg
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.563A>G
  hgvsp: ENSP00000477495.1:p.His188Arg
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.563A>G
  hgvsp: ENSP00000360971.4:p.His188Arg
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.251A>G
  hgvsp: ENSP00000406272.2:p.His84Arg
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.563A>G
  hgvsp: ENSP00000476368.1:p.His188Arg
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41293
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His188Arg
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/1-47401277-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401277
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401277
    reference: chr 1
allele count: 5
allele frequency: 4.125684863687372e-5
allele num: 121192
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.553G>T
  hgvsp: ENSP00000476619.1:p.Val185Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.553G>T
  hgvsp: ENSP00000476988.1:p.Val185Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.553G>T
  hgvsp: ENSP00000360972.1:p.Val185Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.553G>T
  hgvsp: ENSP00000476854.1:p.Val185Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.553G>T
  hgvsp: ENSP00000477495.1:p.Val185Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.553G>T
  hgvsp: ENSP00000476368.1:p.Val185Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.553G>T
  hgvsp: ENSP00000311095.4:p.Val185Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.553G>T
  hgvsp: ENSP00000360971.4:p.Val185Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.241G>T
  hgvsp: ENSP00000406272.2:p.Val81Phe
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11814
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2351
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val185Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP

1-47401282-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401282
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401282
    reference: chr 1
allele count: 4
allele frequency: 3.305348053149996e-5
allele num: 121016
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.548T>C
  hgvsp: ENSP00000360971.4:p.Leu183Pro
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.548T>C
  hgvsp: ENSP00000311095.4:p.Leu183Pro
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.548T>C
  hgvsp: ENSP00000477495.1:p.Leu183Pro
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.548T>C
  hgvsp: ENSP00000476368.1:p.Leu183Pro
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.548T>C
  hgvsp: ENSP00000360972.1:p.Leu183Pro
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.236T>C
  hgvsp: ENSP00000406272.2:p.Leu79Pro
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.548T>C
  hgvsp: ENSP00000476988.1:p.Leu183Pro
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.548T>C
  hgvsp: ENSP00000476619.1:p.Leu183Pro
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.548T>C
  hgvsp: ENSP00000476854.1:p.Leu183Pro
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11777
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu183Pro
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum

1-47401288-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401288
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401288
    reference: chr 1
allele count: 1
allele frequency: 8.300821781356355e-6
allele num: 120470
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.542C>T
  hgvsp: ENSP00000311095.4:p.Ser181Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.542C>T
  hgvsp: ENSP00000476619.1:p.Ser181Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.542C>T
  hgvsp: ENSP00000360972.1:p.Ser181Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.230C>T
  hgvsp: ENSP00000406272.2:p.Ser77Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.542C>T
  hgvsp: ENSP00000476368.1:p.Ser181Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.542C>T
  hgvsp: ENSP00000360971.4:p.Ser181Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.542C>T
  hgvsp: ENSP00000476854.1:p.Ser181Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.542C>T
  hgvsp: ENSP00000476988.1:p.Ser181Phe
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.542C>T
  hgvsp: ENSP00000477495.1:p.Ser181Phe
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11701
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39827
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser181Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ

1-47401295-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401295
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401295
    reference: chr 1
allele count: 14
allele frequency: 1.179960892724698e-4
allele num: 118648
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.535C>T
  hgvsp: ENSP00000476988.1:p.Gln179Ter
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.535C>T
  hgvsp: ENSP00000476619.1:p.Gln179Ter
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.535C>T
  hgvsp: ENSP00000476368.1:p.Gln179Ter
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.535C>T
  hgvsp: ENSP00000360971.4:p.Gln179Ter
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.535C>T
  hgvsp: ENSP00000477495.1:p.Gln179Ter
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.535C>T
  hgvsp: ENSP00000476854.1:p.Gln179Ter
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.223C>T
  hgvsp: ENSP00000406272.2:p.Gln75Ter
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.535C>T
  hgvsp: ENSP00000311095.4:p.Gln179Ter
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.535C>T
  hgvsp: ENSP00000360972.1:p.Gln179Ter
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11239
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3581
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34970
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln179Ter
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/1-47401305-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401305
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401305
    reference: chr 1
allele count: 1
allele frequency: 8.518468038707919e-6
allele num: 117392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.525G>T
  hgvsp: ENSP00000360972.1:p.Glu175Asp
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.213G>T
  hgvsp: ENSP00000406272.2:p.Glu71Asp
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.525G>T
  hgvsp: ENSP00000477495.1:p.Glu175Asp
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.525G>T
  hgvsp: ENSP00000476368.1:p.Glu175Asp
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.525G>T
  hgvsp: ENSP00000476988.1:p.Glu175Asp
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.525G>T
  hgvsp: ENSP00000476619.1:p.Glu175Asp
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.525G>T
  hgvsp: ENSP00000476854.1:p.Glu175Asp
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.525G>T
  hgvsp: ENSP00000311095.4:p.Glu175Asp
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.525G>T
  hgvsp: ENSP00000360971.4:p.Glu175Asp
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3519
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu175Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

1-47401305-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401305
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401305
    reference: chr 1
allele count: 34
allele frequency: 2.896279133160692e-4
allele num: 117392
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.525G>A
  hgvsp: ENST00000310638.4:c.525G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.213G>A
  hgvsp: ENST00000457840.2:c.213G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.525G>A
  hgvsp: ENST00000475477.1:c.525G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.525G>A
  hgvsp: ENST00000371904.4:c.525G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.525G>A
  hgvsp: ENST00000474458.1:c.525G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.525G>A
  hgvsp: ENST00000371905.1:c.525G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.525G>A
  hgvsp: ENST00000462347.1:c.525G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.525G>A
  hgvsp: ENST00000468629.1:c.525G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.525G>A
  hgvsp: ENST00000465874.1:c.525G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33438
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3519
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10799
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1427
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu175Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

1-47401325-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401325
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401325
    reference: chr 1
allele count: 1
allele frequency: 8.634087376964255e-6
allele num: 115820
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.511-6C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.511-6C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.511-6C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.511-6C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.511-6C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.511-6C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.511-6C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.511-6C>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.199-6C>A
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4076
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31182
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4571
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3310
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1914
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1408
  bin: 2.75e1
  variant carriers: 0
hgvs: c.511-6C>A
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

1-47401338-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401338
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401338
    reference: chr 1
allele count: 1
allele frequency: 8.704432296925594e-6
allele num: 114884
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.511-19A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.511-19A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.199-19A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.511-19A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.511-19A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.511-19A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.511-19A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.511-19A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.511-19A>G
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4362
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3079
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12610
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3728
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2741
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1860
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28974
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3941
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2749
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

1-47401346-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401346
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401346
    reference: chr 1
allele count: 1
allele frequency: 8.725546655497967e-6
allele num: 114606
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.511-27G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.511-27G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.511-27G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.511-27G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.511-27G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.199-27G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.511-27G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.511-27G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.511-27G>A
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1194
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4023
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3449
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-47401347-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401347
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401347
    reference: chr 1
allele count: 1
allele frequency: 8.726612678022898e-6
allele num: 114592
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.511-28A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.511-28A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.511-28A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.511-28A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.511-28A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.511-28A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.511-28A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.199-28A>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.511-28A>G
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3970
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12965
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2847
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

1-47401348-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401348
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401348
    reference: chr 1
allele count: 1
allele frequency: 8.726764988218868e-6
allele num: 114590
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.511-29A>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.511-29A>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.511-29A>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.511-29A>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.511-29A>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.511-29A>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.511-29A>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.199-29A>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.511-29A>T
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12941
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 978
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1565
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2482
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

1-47401353-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401353
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401353
    reference: chr 1
allele count: 1
allele frequency: 8.739883584750651e-6
allele num: 114418
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.511-34A>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.511-34A>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.199-34A>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.511-34A>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.511-34A>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.511-34A>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.511-34A>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.511-34A>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.511-34A>C
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3859
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3452
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/1-47401360-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401360
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401360
    reference: chr 1
allele count: 1
allele frequency: 8.748600223964166e-6
allele num: 114304
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.511-41T>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.511-41T>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.511-41T>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.511-41T>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.511-41T>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.511-41T>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.511-41T>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.511-41T>G
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.199-41T>G
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2930
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1616
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

1-47401364-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401364
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401364
    reference: chr 1
allele count: 1
allele frequency: 8.758408071748879e-6
allele num: 114176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.511-45G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.511-45G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.511-45G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.511-45G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.199-45G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.511-45G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.511-45G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.511-45G>A
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.511-45G>A
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29104
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13014
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2948
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3503
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1712
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

1-47401368-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47401368
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47401368
    reference: chr 1
allele count: 1
allele frequency: 8.775778850372971e-6
allele num: 113950
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.511-49C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.511-49C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.511-49C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.511-49C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.511-49C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.511-49C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.511-49C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.511-49C>T
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.199-49C>T
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12975
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1731
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7790
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

1-47402285-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 47402285
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 47402285
    reference: chr 1
allele count: 1
allele frequency: 9.041591320072333e-6
allele num: 110600
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476988
  ensembl transcript: ENST00000474458
  gene symbol: CYP4A11
  hgvsc: ENST00000474458.1:c.510+51T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360971
  ensembl transcript: ENST00000371904
  gene symbol: CYP4A11
  hgvsc: ENST00000371904.4:c.510+51T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476854
  ensembl transcript: ENST00000475477
  gene symbol: CYP4A11
  hgvsc: ENST00000475477.1:c.510+51T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000360972
  ensembl transcript: ENST00000371905
  gene symbol: CYP4A11
  hgvsc: ENST00000371905.1:c.510+51T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000477495
  ensembl transcript: ENST00000462347
  gene symbol: CYP4A11
  hgvsc: ENST00000462347.1:c.510+51T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000311095
  ensembl transcript: ENST00000310638
  gene symbol: CYP4A11
  hgvsc: ENST00000310638.4:c.510+51T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000406272
  ensembl transcript: ENST00000457840
  gene symbol: CYP4A11
  hgvsc: ENST00000457840.2:c.198+51T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476619
  ensembl transcript: ENST00000468629
  gene symbol: CYP4A11
  hgvsc: ENST00000468629.1:c.510+51T>C
  variant of: http://identifiers.org/hgnc/2642
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000187048
  ensembl protein: ENSP00000476368
  ensembl transcript: ENST00000465874
  gene symbol: CYP4A11
  hgvsc: ENST00000465874.1:c.510+51T>C
  variant of: http://identifiers.org/hgnc/2642
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2893
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6876
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2853
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 830
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 559
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2062
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40695
bin: 9.75e1
variant carriers: 56

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2063
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2372
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6658
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1620
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1179
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3032
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004175804368072e-5
allele num: 66574
num of homozygotes: 0

East Asian
type: Population
allele count: 52
allele frequency: 6.017125665355242e-3
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.239771881973717e-4
allele num: 16132
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.05e-1

QD
type: SiteQuality
SIO_000300: 1.337e1

DP
type: SiteQuality
SIO_000300: 3.062898e6

FS
type: SiteQuality
SIO_000300: 5.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-2

MQ
type: SiteQuality
SIO_000300: 5.515e1

VQSLOD
type: SiteQuality
SIO_000300: 5.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.97e0

GenotypeQuality
all individuals: 1881
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1755
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40687
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 175
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4893
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2371
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3037
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509479531457553e-5
allele num: 66248
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15290
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.04e0

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.47e-1

DP
type: SiteQuality
SIO_000300: 3.034182e6

QD
type: SiteQuality
SIO_000300: 1.923e1

MQ
type: SiteQuality
SIO_000300: 5.676e1

GenotypeQuality
all individuals: 195
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2043
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1935
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2371
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3037
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510528382828313e-5
allele num: 66202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15170
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.652e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.99e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.838e-1

FS
type: SiteQuality
SIO_000300: 2.785e0

DP
type: SiteQuality
SIO_000300: 3.029876e6

QD
type: SiteQuality
SIO_000300: 1.065e1

MQ
type: SiteQuality
SIO_000300: 5.535e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 4384
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2370
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1835
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3037
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1124
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2043
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15070
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511213201958532e-5
allele num: 66172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.427e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.43e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.003e0

FS
type: SiteQuality
SIO_000300: 2.257e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.29e0

MQRankSum
type: SiteQuality
SIO_000300: 3.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.426e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

DP
type: SiteQuality
SIO_000300: 3.025632e6

GenotypeQuality
all individuals: 645
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2360
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3565
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2370
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.734913793103448e-5
allele num: 14848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66066
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 5.669999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -8.45e-1

MQ
type: SiteQuality
SIO_000300: 5.808e1

DP
type: SiteQuality
SIO_000300: 3.015855e6

VQSLOD
type: SiteQuality
SIO_000300: -1.753e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.91e-1

QD
type: SiteQuality
SIO_000300: 1.055e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.74e-1

GenotypeQuality
all individuals: 1799
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.745817593092283e-5
allele num: 14824
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514050387596899e-5
allele num: 66048
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.29e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.97e-1

DP
type: SiteQuality
SIO_000300: 3.014515e6

VQSLOD
type: SiteQuality
SIO_000300: -5.293e0

FS
type: SiteQuality
SIO_000300: 2.7264e1

MQRankSum
type: SiteQuality
SIO_000300: -3.228e0

QD
type: SiteQuality
SIO_000300: 7.26e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.931620629708325e-4
allele num: 10354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14704
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e-1

QD
type: SiteQuality
SIO_000300: 1.167e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.796e0

VQSLOD
type: SiteQuality
SIO_000300: -1.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 3.011945e6

MQRankSum
type: SiteQuality
SIO_000300: 4.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.71e-1

FS
type: SiteQuality
SIO_000300: 1.76e0

MQ
type: SiteQuality
SIO_000300: 5.761e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.810133478616181e-5
allele num: 14684
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.090358160111508e-5
allele num: 66004
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.79e0

FS
type: SiteQuality
SIO_000300: 5.718e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.482e0

QD
type: SiteQuality
SIO_000300: 1.026e1

MQRankSum
type: SiteQuality
SIO_000300: -2.603e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.167e1

DP
type: SiteQuality
SIO_000300: 3.010849e6

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1616
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 40750
bin: 9.75e1
variant carriers: 466

GenotypeQuality
all individuals: 2928
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 1

Latino
type: Population
allele count: 11
allele frequency: 9.527108955482419e-4
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 38
allele frequency: 2.630121816168328e-3
allele num: 14448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 35
allele frequency: 5.291805261566375e-3
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 13
allele frequency: 1.257010249468188e-3
allele num: 10342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 368
allele frequency: 5.584218512898331e-3
allele num: 65900
num of homozygotes: 1

Other
type: Population
allele count: 2
allele frequency: 2.288329519450801e-3
allele num: 874
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.611e1

FS
type: SiteQuality
SIO_000300: 6.870000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-2

DP
type: SiteQuality
SIO_000300: 3.008792e6

MQRankSum
type: SiteQuality
SIO_000300: 9.14e-1

QD
type: SiteQuality
SIO_000300: 1.416e1

VQSLOD
type: SiteQuality
SIO_000300: 3.36e0

GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2928
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2357
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517450682852807e-5
allele num: 65900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-2

DP
type: SiteQuality
SIO_000300: 3.008792e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.96e0

MQRankSum
type: SiteQuality
SIO_000300: 9.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.26e-1

FS
type: SiteQuality
SIO_000300: 6.870000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.416e1

MQ
type: SiteQuality
SIO_000300: 5.611e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

GenotypeQuality
all individuals: 103
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 92
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GenotypeQuality
all individuals: 446
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65882
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.67305088024763e-5
allele num: 10338
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14394
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.578e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.492e0

QD
type: SiteQuality
SIO_000300: 1.19e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.24e-1

DP
type: SiteQuality
SIO_000300: 2.998881e6

MQ
type: SiteQuality
SIO_000300: 5.614e1

FS
type: SiteQuality
SIO_000300: 9.573e0

MQRankSum
type: SiteQuality
SIO_000300: 6.04e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 106
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.036283588887202e-5
allele num: 65870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 7.26e-1

MQ
type: SiteQuality
SIO_000300: 5.604e1

VQSLOD
type: SiteQuality
SIO_000300: -1.484e-1

DP
type: SiteQuality
SIO_000300: 2.998018e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.15e-1

QD
type: SiteQuality
SIO_000300: 1.555e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1785
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 1628
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2428
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3047
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.964758322886195e-5
allele num: 14358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65870
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.38e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.484e-1

QD
type: SiteQuality
SIO_000300: 1.555e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e-1

FS
type: SiteQuality
SIO_000300: 7.26e-1

DP
type: SiteQuality
SIO_000300: 2.998018e6

MQ
type: SiteQuality
SIO_000300: 5.604e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14216
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.473026163463765e-4
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

DP
type: SiteQuality
SIO_000300: 2.995162e6

QD
type: SiteQuality
SIO_000300: 1.378e1

FS
type: SiteQuality
SIO_000300: 2.489e0

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

VQSLOD
type: SiteQuality
SIO_000300: 3.62e0

MQ
type: SiteQuality
SIO_000300: 5.603e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.95e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 46

GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65742
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 46
allele frequency: 4.454774355994577e-3
allele num: 10326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.467e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.099999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.85e-1

MQ
type: SiteQuality
SIO_000300: 5.493e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.253e1

DP
type: SiteQuality
SIO_000300: 2.992105e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13910
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.042195248091022e-5
allele num: 65742
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.85e-1

QD
type: SiteQuality
SIO_000300: 1.253e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.55e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.099999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e-1

MQ
type: SiteQuality
SIO_000300: 5.493e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.467e0

DP
type: SiteQuality
SIO_000300: 2.992105e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3042
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.567322331161318e-5
allele num: 65684
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13808
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.987422e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

FS
type: SiteQuality
SIO_000300: 6.507e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQ
type: SiteQuality
SIO_000300: 5.636e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.71e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.241e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.73e-1

QD
type: SiteQuality
SIO_000300: 1.383e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13808
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522440777053773e-5
allele num: 65684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQ
type: SiteQuality
SIO_000300: 5.636e1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.507e0

QD
type: SiteQuality
SIO_000300: 1.383e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.522811719558994e-5
allele num: 65668
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.176e0

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.954e0

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-3

MQ
type: SiteQuality
SIO_000300: 5.304e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-2

DP
type: SiteQuality
SIO_000300: 2.985511e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 2.909231962761831e-4
allele num: 10312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
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allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6608
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South Asian
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Other
type: Population
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65526
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.03e-1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.4e1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.54e0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525553012967201e-5
allele num: 65550
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South Asian
type: Population
allele count: 1
allele frequency: 7.449344457687723e-5
allele num: 13424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

Other
type: Population
allele count: 0
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -9.477e-1

MQ
type: SiteQuality
SIO_000300: 5.261e1

GenotypeQuality
all individuals: 1473
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 775
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1066
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1608
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 950
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3048
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1997
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1594
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2361
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40547
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.980425e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.513e1

VQSLOD
type: SiteQuality
SIO_000300: -1.011e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

MQ
type: SiteQuality
SIO_000300: 4.966e1

GenotypeQuality
all individuals: 1373
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1977
bin: 5.75e1
variant carriers: 5

GenotypeQuality
all individuals: 4450
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1064
bin: 8.25e1
variant carriers: 8

GenotypeQuality
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bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2113
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1510
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 3428
bin: 9.75e1
variant carriers: 153

GenotypeQuality
all individuals: 2482
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 475
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2418
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5763
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9148
bin: 6.25e1
variant carriers: 5

GenotypeQuality
all individuals: 460
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1813
bin: 7.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 150
allele frequency: 2.58086717136958e-3
allele num: 58120
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8248
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 1.280260707635009e-3
allele num: 8592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.673920321392702e-4
allele num: 5974
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.88235294117647e-4
allele num: 8500
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 1.008249312557287e-3
allele num: 10910
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.754820936639119e-3
allele num: 726
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.388e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

QD
type: SiteQuality
SIO_000300: 9.380000000000001e0

MQ
type: SiteQuality
SIO_000300: 2.3e1

FS
type: SiteQuality
SIO_000300: 1.737e0

VQSLOD
type: SiteQuality
SIO_000300: -5.019e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.35e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

DP
type: SiteQuality
SIO_000300: 1.201891e6

GenotypeQuality
all individuals: 10508
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5342
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 439
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1055
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10930
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5984
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.433594286499107e-5
allele num: 58248
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.2e1

VQSLOD
type: SiteQuality
SIO_000300: -6.596e0

FS
type: SiteQuality
SIO_000300: 9.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

DP
type: SiteQuality
SIO_000300: 1.204194e6

MQRankSum
type: SiteQuality
SIO_000300: 6.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.147e0

QD
type: SiteQuality
SIO_000300: 3.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

GenotypeQuality
all individuals: 4420
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1026
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3958
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4456
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5984
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8258
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10930
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.716797143249554e-5
allele num: 58248
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

DP
type: SiteQuality
SIO_000300: 1.204194e6

MQ
type: SiteQuality
SIO_000300: 2.2e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.147e0

FS
type: SiteQuality
SIO_000300: 9.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.596e0

QD
type: SiteQuality
SIO_000300: 3.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.96e-1

GenotypeQuality
all individuals: 356
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3026
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1056
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 861
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5052
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variant carriers: 0

GenotypeQuality
all individuals: 1815
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
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variant carriers: 0

GenotypeQuality
all individuals: 1522
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10930
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.71609006040637e-5
allele num: 58272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8250
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5986
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.012e0

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 8.701000000000001e0

DP
type: SiteQuality
SIO_000300: 1.219254e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.517e0

VQSLOD
type: SiteQuality
SIO_000300: -6.861e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

MQ
type: SiteQuality
SIO_000300: 2.329e1

QD
type: SiteQuality
SIO_000300: 6.46e0

GenotypeQuality
all individuals: 30567
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1273
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3331
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1580
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 314
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variant carriers: 0

GenotypeQuality
all individuals: 1763
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6572
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2092
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variant carriers: 0

GenotypeQuality
all individuals: 1212
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59942
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6084
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.805706031058144e-4
allele num: 11076
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9076
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

DP
type: SiteQuality
SIO_000300: 1.385265e6

VQSLOD
type: SiteQuality
SIO_000300: 5.82e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.44e-1

FS
type: SiteQuality
SIO_000300: 1.1587e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-1

QD
type: SiteQuality
SIO_000300: 9.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

MQ
type: SiteQuality
SIO_000300: 2.803e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

GenotypeQuality
all individuals: 2197
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
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variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 877
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3358
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1310
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32871
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6883
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variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9070
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.644195988161789e-5
allele num: 60820
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.17e0

QD
type: SiteQuality
SIO_000300: 4.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.224e0

MQRankSum
type: SiteQuality
SIO_000300: -1.068e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

DP
type: SiteQuality
SIO_000300: 1.421114e6

MQ
type: SiteQuality
SIO_000300: 2.96e1

VQSLOD
type: SiteQuality
SIO_000300: -4.919e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-2

GenotypeQuality
all individuals: 143
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2014
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GenotypeQuality
all individuals: 145
bin: 1.25e1
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GenotypeQuality
all individuals: 561
bin: 8.75e1
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GenotypeQuality
all individuals: 718
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1347
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6160
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.029018316526034e-4
allele num: 9718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11210
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.084363478638039e-4
allele num: 9222
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.636e0

MQ
type: SiteQuality
SIO_000300: 2.81e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.974e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e0

QD
type: SiteQuality
SIO_000300: 7.4e0

DP
type: SiteQuality
SIO_000300: 1.440856e6

GenotypeQuality
all individuals: 7428
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3394
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2090
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3607
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1389
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2319
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37724
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.570549063952758e-5
allele num: 63672
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.039068994181214e-4
allele num: 9624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

FS
type: SiteQuality
SIO_000300: 7.573e0

MQ
type: SiteQuality
SIO_000300: 3.165e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.86e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.257e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.504303e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

QD
type: SiteQuality
SIO_000300: 8.619999999999999e0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64148
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.0315659170621e-4
allele num: 9694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.575e0

MQ
type: SiteQuality
SIO_000300: 3.311e1

MQRankSum
type: SiteQuality
SIO_000300: -4.5e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.15e-1

QD
type: SiteQuality
SIO_000300: 9.779999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.516301e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.551937608108518e-5
allele num: 65906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.121e0

DP
type: SiteQuality
SIO_000300: 1.555634e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 2.911e1

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.070000000000001e-1

QD
type: SiteQuality
SIO_000300: 9.98e0

FS
type: SiteQuality
SIO_000300: 8.878e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.409e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1402
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513958699206686e-5
allele num: 66052
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.560324e6

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

QD
type: SiteQuality
SIO_000300: 8.220000000000001e0

FS
type: SiteQuality
SIO_000300: 1.658e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

MQ
type: SiteQuality
SIO_000300: 2.781e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.518e0

VQSLOD
type: SiteQuality
SIO_000300: -5.182e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.866135854690221e-4
allele num: 16076
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.485e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.571e0

DP
type: SiteQuality
SIO_000300: 1.574242e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.91e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.203e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.08e1

MQ
type: SiteQuality
SIO_000300: 3.085e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16076
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 12
allele frequency: 1.815431164901664e-3
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.053201733269138e-4
allele num: 66464
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.19e-1

QD
type: SiteQuality
SIO_000300: 1.08e1

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 3.085e1

VQSLOD
type: SiteQuality
SIO_000300: -4.203e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.571e0

DP
type: SiteQuality
SIO_000300: 1.574242e6

MQRankSum
type: SiteQuality
SIO_000300: 4.91e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502584445245823e-5
allele num: 66552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16252
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.592e0

QD
type: SiteQuality
SIO_000300: 9.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.899e0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.576483e6

MQ
type: SiteQuality
SIO_000300: 3.093e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.21e-1

VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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MQRankSum
type: SiteQuality
SIO_000300: 6.39e-1

InbreedingCoeff
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BaseQRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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QD
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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DP
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SIO_000300: 1.579664e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 587
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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East Asian
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African
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Other
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European (Non-Finnish)
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MQRankSum
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MQ
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FS
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DP
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QD
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Finnish)
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South Asian
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European (Non-Finnish)
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Latino
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Other
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QD
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FS
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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East Asian
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Other
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Latino
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European (Finnish)
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BaseQRankSum
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MQ
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QD
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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African
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Other
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European (Non-Finnish)
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allele num: 66686
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East Asian
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South Asian
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BaseQRankSum
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DP
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MQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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QD
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ReadPosRankSum
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Finnish)
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African
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Other
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South Asian
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European (Non-Finnish)
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allele num: 66692
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MQRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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QD
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FS
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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African
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East Asian
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Latino
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European (Finnish)
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FS
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ClippingRankSum
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MQRankSum
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DP
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VQSLOD
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MQ
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QD
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Latino
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European (Finnish)
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African
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QD
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BaseQRankSum
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InbreedingCoeff
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MQ
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FS
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MQRankSum
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VQSLOD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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QD
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FS
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DP
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MQ
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VQSLOD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

MQ
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SIO_000300: 3.501e1

QD
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BaseQRankSum
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SIO_000300: 1.69e0

MQRankSum
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ClippingRankSum
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SIO_000300: 6.4e-1

VQSLOD
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FS
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SIO_000300: 3.892e0

DP
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.648e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele num: 908
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

MQRankSum
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FS
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MQ
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QD
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VQSLOD
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DP
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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SIO_000300: -2.634e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.581935e6

InbreedingCoeff
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SIO_000300: 8.0e-4

BaseQRankSum
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SIO_000300: -5.749e0

QD
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MQ
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VQSLOD
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ReadPosRankSum
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MQRankSum
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SIO_000300: -7.2e-1

FS
type: SiteQuality
SIO_000300: 8.8e-1

ClippingRankSum
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SIO_000300: -9.18e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.575e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.068e0

MQRankSum
type: SiteQuality
SIO_000300: -1.078e0

FS
type: SiteQuality
SIO_000300: 3.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

VQSLOD
type: SiteQuality
SIO_000300: -4.395e0

QD
type: SiteQuality
SIO_000300: 9.5e-1

DP
type: SiteQuality
SIO_000300: 1.581745e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.12e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.581554e6

QD
type: SiteQuality
SIO_000300: 1.056e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-2

MQRankSum
type: SiteQuality
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InbreedingCoeff
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.53e0

MQ
type: SiteQuality
SIO_000300: 3.577e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

Other
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num of homozygotes: 0

African
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allele count: 0
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East Asian
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BaseQRankSum
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FS
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DP
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MQ
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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QD
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

South Asian
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Latino
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allele num: 11572
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European (Finnish)
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African
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European (Non-Finnish)
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num of homozygotes: 0

East Asian
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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QD
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ClippingRankSum
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VQSLOD
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MQRankSum
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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Other
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European (Finnish)
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East Asian
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European (Non-Finnish)
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South Asian
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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DP
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QD
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ReadPosRankSum
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FS
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MQRankSum
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.537e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

DP
type: SiteQuality
SIO_000300: 1.580565e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.76e-1

FS
type: SiteQuality
SIO_000300: 3.127e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.11e-1

QD
type: SiteQuality
SIO_000300: 1.034e1

MQ
type: SiteQuality
SIO_000300: 3.624e1

MQRankSum
type: SiteQuality
SIO_000300: 1.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7782
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1407
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2172
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 586
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GenotypeQuality
all individuals: 3404
bin: 9.75e1
variant carriers: 5

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 41454
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.820830298616169e-4
allele num: 16476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.312138728323699e-4
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

QD
type: SiteQuality
SIO_000300: 5.17e0

MQ
type: SiteQuality
SIO_000300: 3.108e1

VQSLOD
type: SiteQuality
SIO_000300: -3.771e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.769e0

FS
type: SiteQuality
SIO_000300: 5.489e0

DP
type: SiteQuality
SIO_000300: 1.577464e6

GenotypeQuality
all individuals: 193
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
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GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 544
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variant carriers: 0

GenotypeQuality
all individuals: 143
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variant carriers: 0

GenotypeQuality
all individuals: 1406
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7782
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3404
bin: 9.75e1
variant carriers: 4

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.012506012506013e-5
allele num: 66528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.894e1

FS
type: SiteQuality
SIO_000300: 5.23e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.848e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.152e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.51e-1

QD
type: SiteQuality
SIO_000300: 1.019e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

DP
type: SiteQuality
SIO_000300: 1.573096e6

MQRankSum
type: SiteQuality
SIO_000300: -9.12e-1

GenotypeQuality
all individuals: 128
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2159
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1405
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 340
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 306
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variant carriers: 0

GenotypeQuality
all individuals: 146
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variant carriers: 0

GenotypeQuality
all individuals: 90
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3402
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 441
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2343
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7656
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507068149621726e-5
allele num: 66354
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16102
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.511e0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.457e0

VQSLOD
type: SiteQuality
SIO_000300: -5.083e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.55e-1

QD
type: SiteQuality
SIO_000300: 7.62e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.03e-1

DP
type: SiteQuality
SIO_000300: 1.562271e6

MQ
type: SiteQuality
SIO_000300: 2.673e1

GenotypeQuality
all individuals: 7164
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 874
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1399
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variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3413
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 54
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variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3028
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2098
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34414
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.014775016789792e-4
allele num: 14890
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.279962764719572e-3
allele num: 8594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65824
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.58e-1

FS
type: SiteQuality
SIO_000300: 3.221e0

MQRankSum
type: SiteQuality
SIO_000300: -7.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.863e0

QD
type: SiteQuality
SIO_000300: 9.06e0

MQ
type: SiteQuality
SIO_000300: 2.848e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

DP
type: SiteQuality
SIO_000300: 1.520372e6

GenotypeQuality
all individuals: 54
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6888
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2327
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3789
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1173
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 1606
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31921
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 585
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variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1427
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3435
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2084
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527370478983382e-5
allele num: 65472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.489887e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.75e-1

FS
type: SiteQuality
SIO_000300: 1.757e0

VQSLOD
type: SiteQuality
SIO_000300: -4.718e0

MQ
type: SiteQuality
SIO_000300: 2.572e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e-1

GenotypeQuality
all individuals: 1606
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1173
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3789
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3435
bin: 9.75e1
variant carriers: 34

GenotypeQuality
all individuals: 367
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2327
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31921
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.25e1
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GenotypeQuality
all individuals: 2084
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6888
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1401
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 27
allele frequency: 4.123900293255132e-4
allele num: 65472
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.138952164009112e-3
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.220114842526536e-4
allele num: 11494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14062
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.75e-1

DP
type: SiteQuality
SIO_000300: 1.489887e6

MQ
type: SiteQuality
SIO_000300: 2.572e1

FS
type: SiteQuality
SIO_000300: 1.757e0

VQSLOD
type: SiteQuality
SIO_000300: -4.718e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.640000000000001e0

GenotypeQuality
all individuals: 4087
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3416
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 437
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variant carriers: 0

GenotypeQuality
all individuals: 367
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GenotypeQuality
all individuals: 29274
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GenotypeQuality
all individuals: 200
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GenotypeQuality
all individuals: 2507
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GenotypeQuality
all individuals: 1068
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GenotypeQuality
all individuals: 598
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GenotypeQuality
all individuals: 1321
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GenotypeQuality
all individuals: 7011
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variant carriers: 0

GenotypeQuality
all individuals: 44
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GenotypeQuality
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GenotypeQuality
all individuals: 293
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1622
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2203
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169864295741694e-4
allele num: 8548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65082
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12980
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.3558e1

VQSLOD
type: SiteQuality
SIO_000300: -7.419e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.335e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

DP
type: SiteQuality
SIO_000300: 1.476431e6

QD
type: SiteQuality
SIO_000300: 2.32e0

MQ
type: SiteQuality
SIO_000300: 2.753e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: -3.052e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.031e0

GenotypeQuality
all individuals: 982
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3446
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variant carriers: 1

GenotypeQuality
all individuals: 502
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variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
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GenotypeQuality
all individuals: 818
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variant carriers: 0

GenotypeQuality
all individuals: 1450
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 700
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variant carriers: 0

GenotypeQuality
all individuals: 7456
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variant carriers: 0

GenotypeQuality
all individuals: 425
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GenotypeQuality
all individuals: 1624
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variant carriers: 0

GenotypeQuality
all individuals: 480
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variant carriers: 0

GenotypeQuality
all individuals: 2397
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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South Asian
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East Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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Latino
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African
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ReadPosRankSum
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QD
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MQ
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VQSLOD
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MQRankSum
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FS
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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European (Non-Finnish)
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East Asian
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South Asian
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MQRankSum
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DP
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FS
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BaseQRankSum
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QD
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ClippingRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.544544668231805e-5
allele num: 64744
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Other
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QD
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ReadPosRankSum
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MQ
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ClippingRankSum
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FS
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DP
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InbreedingCoeff
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VQSLOD
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 64740
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 8.21287779237845e-5
allele num: 12176
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European (Finnish)
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 2.847e1

MQRankSum
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DP
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QD
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FS
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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MQ
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ReadPosRankSum
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ClippingRankSum
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FS
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BaseQRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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European (Finnish)
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South Asian
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Other
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European (Non-Finnish)
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East Asian
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FS
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VQSLOD
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MQ
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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QD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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MQ
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FS
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Other
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East Asian
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Latino
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African
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European (Finnish)
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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QD
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FS
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MQ
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BaseQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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