2-102954771-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102954771
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102954771
    reference: chr 2
allele count: 4
allele frequency: 3.304528856798242e-5
allele num: 121046
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-24322C>T
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.291C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-670C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.47C>T
  hgvsp: ENSP00000409437.1:p.Thr16Ile
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.47C>T
  hgvsp: ENSP00000310371.2:p.Thr16Ile
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.47C>T
  hgvsp: ENSP00000386618.1:p.Thr16Ile
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.47C>T
  hgvsp: ENSP00000391120.1:p.Thr16Ile
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-526C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.47C>T
  hgvsp: ENSP00000377052.3:p.Thr16Ile
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.47C>T
  hgvsp: ENSP00000233954.1:p.Thr16Ile
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-526C>T
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13416
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5061
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr16Ile
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD

2-102954777-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102954777
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102954777
    reference: chr 2
allele count: 2
allele frequency: 1.652919882973272e-5
allele num: 120998
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-24316C>G
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.53C>G
  hgvsp: ENSP00000391120.1:p.Ala18Gly
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.53C>G
  hgvsp: ENSP00000233954.1:p.Ala18Gly
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.297C>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-520C>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.53C>G
  hgvsp: ENSP00000377052.3:p.Ala18Gly
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.53C>G
  hgvsp: ENSP00000409437.1:p.Ala18Gly
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.53C>G
  hgvsp: ENSP00000386618.1:p.Ala18Gly
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-520C>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.53C>G
  hgvsp: ENSP00000310371.2:p.Ala18Gly
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-664C>G
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala18Gly
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

2-102954777-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102954777
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102954777
    reference: chr 2
allele count: 2
allele frequency: 1.652919882973272e-5
allele num: 120998
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.297C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-520C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-24316C>T
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.53C>T
  hgvsp: ENSP00000310371.2:p.Ala18Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.53C>T
  hgvsp: ENSP00000377052.3:p.Ala18Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.53C>T
  hgvsp: ENSP00000233954.1:p.Ala18Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.53C>T
  hgvsp: ENSP00000386618.1:p.Ala18Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.53C>T
  hgvsp: ENSP00000409437.1:p.Ala18Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.53C>T
  hgvsp: ENSP00000391120.1:p.Ala18Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-664C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-520C>T
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5060
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala18Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/2-102954780-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102954780
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102954780
    reference: chr 2
allele count: 1
allele frequency: 8.268289456277286e-6
allele num: 120944
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.300A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.56A>C
  hgvsp: ENSP00000377052.3:p.Lys19Thr
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.56A>C
  hgvsp: ENSP00000233954.1:p.Lys19Thr
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.56A>C
  hgvsp: ENSP00000310371.2:p.Lys19Thr
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-517A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.56A>C
  hgvsp: ENSP00000409437.1:p.Lys19Thr
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-661A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.56A>C
  hgvsp: ENSP00000391120.1:p.Lys19Thr
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-24313A>C
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.56A>C
  hgvsp: ENSP00000386618.1:p.Lys19Thr
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-517A>C
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5059
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13394
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys19Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

2-102954780-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102954780
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102954780
    reference: chr 2
allele count: 9
allele frequency: 7.441460510649557e-5
allele num: 120944
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.56A>T
  hgvsp: ENSP00000386618.1:p.Lys19Met
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.56A>T
  hgvsp: ENSP00000377052.3:p.Lys19Met
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.56A>T
  hgvsp: ENSP00000391120.1:p.Lys19Met
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.300A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.56A>T
  hgvsp: ENSP00000233954.1:p.Lys19Met
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-517A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-661A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-517A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.56A>T
  hgvsp: ENSP00000409437.1:p.Lys19Met
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.56A>T
  hgvsp: ENSP00000310371.2:p.Lys19Met
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-24313A>T
  variant of: http://identifiers.org/hgnc/5988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5059
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13394
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8327
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys19Met
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD

2-102954786-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102954786
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102954786
    reference: chr 2
allele count: 10
allele frequency: 8.274583788435442e-5
allele num: 120852
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.61+1G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.61+1G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.61+1G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-511G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.61+1G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-511G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-655G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.61+1G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.305+1G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.61+1G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-24307G>C
  variant of: http://identifiers.org/hgnc/5988
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5057
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11543
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12992
  bin: 6.75e1
  variant carriers: 0
hgvs: c.61+1G>C
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

2-102954799-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102954799
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102954799
    reference: chr 2
allele count: 1
allele frequency: 8.34640937468701e-6
allele num: 119812
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-642T>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-498T>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-24294T>A
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.61+14T>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.61+14T>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.61+14T>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.61+14T>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.61+14T>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.61+14T>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-498T>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.305+14T>A
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10596
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8007
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

2-102954800-CTAAGTA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102954800
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102954794
    reference: chr 2
allele count: 2
allele frequency: 1.67221283925018e-5
allele num: 119602
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-493_58-488delGTATAA
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.61+19_61+24delGTATAA
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-637_-146-632delGTATAA
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.61+19_61+24delGTATAA
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.61+19_61+24delGTATAA
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.61+19_61+24delGTATAA
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.305+19_305+24delGTATAA
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.61+19_61+24delGTATAA
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-493_89-488delGTATAA
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.61+19_61+24delGTATAA
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  variant of: http://identifiers.org/hgnc/5988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12341
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10686
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2444
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7847
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4784
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: CTAAGTA
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS

http://identifiers.org/exac.variant/2-102954803-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102954803
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102954803
    reference: chr 2
allele count: 1
allele frequency: 8.475438180153914e-6
allele num: 117988
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-638A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.61+18A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.61+18A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-494A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.61+18A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.61+18A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.61+18A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.61+18A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.305+18A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-494A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-24290A>C
  variant of: http://identifiers.org/hgnc/5988
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4043
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6808
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1518
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

2-102954807-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102954807
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102954807
    reference: chr 2
allele count: 1
allele frequency: 8.717179817985285e-6
allele num: 114716
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-24286T>C
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.61+22T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.61+22T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-490T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.61+22T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.61+22T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-634T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-490T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.61+22T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.305+22T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.61+22T>C
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4254
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11699
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11748
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD

2-102954809-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102954809
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102954809
    reference: chr 2
allele count: 4
allele frequency: 3.528768283430669e-5
allele num: 113354
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-632A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.61+24A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-488A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.61+24A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.61+24A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-488A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.61+24A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.61+24A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.305+24A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-24284A>T
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.61+24A>T
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5630
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11563
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4882
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8204
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

2-102954811-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102954811
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102954811
    reference: chr 2
allele count: 21
allele frequency: 1.949788308697913e-4
allele num: 107704
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.61+26T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.61+26T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.61+26T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-630T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.305+26T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.61+26T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-486T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.61+26T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.61+26T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-24282T>G
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-486T>G
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10591
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4034
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6934
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11006
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4629
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7261
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7388
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

2-102954816-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102954816
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102954816
    reference: chr 2
allele count: 1
allele frequency: 1.062970364386241e-5
allele num: 94076
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.61+31T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.61+31T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.305+31T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-481T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-481T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.61+31T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-24277T>G
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.61+31T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-625T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.61+31T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.61+31T>G
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3788
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6735
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5267
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4040
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5811
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-102954817-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102954817
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102954817
    reference: chr 2
allele count: 1
allele frequency: 1.061841658171933e-5
allele num: 94176
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.305+32T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.61+32T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.61+32T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-480T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.61+32T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-624T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.61+32T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-24276T>G
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-480T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.61+32T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.61+32T>G
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5831
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-102954825-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102954825
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102954825
    reference: chr 2
allele count: 1
allele frequency: 1.172993008961667e-5
allele num: 85252
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.61+40A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-472A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-472A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.61+40A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-616A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.61+40A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.305+40A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-24268A>C
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.61+40A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.61+40A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.61+40A>C
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7996
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3864
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11507
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11824
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4727
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/2-102955249-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955249
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955249
    reference: chr 2
allele count: 1
allele frequency: 8.609853115905842e-6
allele num: 116146
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-48C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.306-48C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.62-48C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.62-48C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.62-48C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.62-48C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-48C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.62-48C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-192C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23844C>A
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.62-48C>A
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7838
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11338
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5531
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7704
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

2-102955258-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955258
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955258
    reference: chr 2
allele count: 1
allele frequency: 8.571918395336876e-6
allele num: 116660
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.62-39T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.62-39T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.62-39T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-39T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.62-39T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-183T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.62-39T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-39T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.62-39T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23835T>C
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.306-39T>C
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2122
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8197
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12005
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4319
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

2-102955260-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955260
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955260
    reference: chr 2
allele count: 10
allele frequency: 8.5647236163689e-5
allele num: 116758
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.62-37A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.306-37A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.62-37A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23833A>G
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.62-37A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.62-37A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.62-37A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-181A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-37A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-37A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.62-37A>G
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12253
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8375
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

2-102955282-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955282
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955282
    reference: chr 2
allele count: 5
allele frequency: 4.190904061824217e-5
allele num: 119306
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.62-15A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-15A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.62-15A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.62-15A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.306-15A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23811A>G
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.62-15A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.62-15A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-159A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.62-15A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-15A>G
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

2-102955285-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955285
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955285
    reference: chr 2
allele count: 1
allele frequency: 8.359246999030327e-6
allele num: 119628
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23808T>G
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.62-12T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.62-12T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-12T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.306-12T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-12T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.62-12T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.62-12T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-156T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.62-12T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.62-12T>G
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11782
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

2-102955290-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955290
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955290
    reference: chr 2
allele count: 2
allele frequency: 1.665611779206503e-5
allele num: 120076
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.62-7T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.62-7T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.62-7T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.62-7T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-7T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-7T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23803T>G
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.62-7T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.306-7T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.62-7T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-151T>G
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.62-7T>G
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

2-102955293-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955293
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955293
    reference: chr 2
allele count: 8
allele frequency: 6.652142821506377e-5
allele num: 120262
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-4G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-148G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.62-4G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.62-4G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.306-4G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.62-4G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.62-4G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.62-4G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23800G>A
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-4G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.62-4G>A
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9194
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13712
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: c.62-4G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/2-102955295-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955295
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955295
    reference: chr 2
allele count: 1
allele frequency: 8.300683976359652e-6
allele num: 120472
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.306-2A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.62-2A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.62-2A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.62-2A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.58-2A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.62-2A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.89-2A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23798A>C
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.62-2A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.62-2A>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-146A>C
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24360
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4489
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: c.62-2A>C
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

2-102955304-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955304
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955304
    reference: chr 2
allele count: 1
allele frequency: 8.271709100534353e-6
allele num: 120894
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.69A>G
  hgvsp: ENST00000233954.1:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.69A>G
  hgvsp: ENST00000393393.3:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.313A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.69A>G
  hgvsp: ENST00000409584.1:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.69A>G
  hgvsp: ENST00000447231.1:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.69A>G
  hgvsp: ENST00000427077.1:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.69A>G
  hgvsp: ENST00000311734.2:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.96A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.65A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23789A>G
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-137A>G
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2189
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln23Gln
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD

2-102955308-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955308
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955309
    reference: chr 2
allele count: 6
allele frequency: 4.959661420447031e-5
allele num: 120976
alternate allele: TG
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.77dupG
  hgvsp: ENSP00000233954.1:p.Leu27ProfsTer4
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.77dupG
  hgvsp: ENSP00000377052.3:p.Leu27ProfsTer4
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.77dupG
  hgvsp: ENSP00000310371.2:p.Leu27ProfsTer4
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.77dupG
  hgvsp: ENSP00000391120.1:p.Leu27ProfsTer4
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.104dupG
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.73dupG
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.321dupG
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-129dupG
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.77dupG
  hgvsp: ENSP00000386618.1:p.Leu27ProfsTer4
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.77dupG
  hgvsp: ENSP00000409437.1:p.Leu27ProfsTer4
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23781dupG
  variant of: http://identifiers.org/hgnc/5988
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu27ProfsTer4
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

2-102955312-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955312
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955312
    reference: chr 2
allele count: 2
allele frequency: 1.652100645971353e-5
allele num: 121058
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.77G>A
  hgvsp: ENSP00000377052.3:p.Gly26Asp
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.77G>A
  hgvsp: ENSP00000310371.2:p.Gly26Asp
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.77G>A
  hgvsp: ENSP00000386618.1:p.Gly26Asp
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.77G>A
  hgvsp: ENSP00000233954.1:p.Gly26Asp
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-129G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.77G>A
  hgvsp: ENSP00000409437.1:p.Gly26Asp
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.73G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.104G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.321G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.77G>A
  hgvsp: ENSP00000391120.1:p.Gly26Asp
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23781G>A
  variant of: http://identifiers.org/hgnc/5988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly26Asp
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

2-102955312-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955312
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955312
    reference: chr 2
allele count: 2
allele frequency: 1.652100645971353e-5
allele num: 121058
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.77G>T
  hgvsp: ENSP00000386618.1:p.Gly26Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.77G>T
  hgvsp: ENSP00000391120.1:p.Gly26Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.73G>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.321G>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.77G>T
  hgvsp: ENSP00000233954.1:p.Gly26Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.77G>T
  hgvsp: ENSP00000310371.2:p.Gly26Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.77G>T
  hgvsp: ENSP00000409437.1:p.Gly26Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.77G>T
  hgvsp: ENSP00000377052.3:p.Gly26Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.104G>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23781G>T
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-129G>T
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly26Val
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

2-102955316-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955316
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955316
    reference: chr 2
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.81G>T
  hgvsp: ENST00000447231.1:c.81G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.81G>T
  hgvsp: ENST00000427077.1:c.81G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.81G>T
  hgvsp: ENST00000393393.3:c.81G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.108G>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.77G>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.81G>T
  hgvsp: ENST00000233954.1:c.81G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.81G>T
  hgvsp: ENST00000311734.2:c.81G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-125G>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.81G>T
  hgvsp: ENST00000409584.1:c.81G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.325G>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23777G>T
  variant of: http://identifiers.org/hgnc/5988
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu27Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

2-102955317-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955317
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955317
    reference: chr 2
allele count: 1
allele frequency: 8.256547442121603e-6
allele num: 121116
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.78G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.82G>A
  hgvsp: ENSP00000233954.1:p.Glu28Lys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.82G>A
  hgvsp: ENSP00000377052.3:p.Glu28Lys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.109G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.82G>A
  hgvsp: ENSP00000391120.1:p.Glu28Lys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.82G>A
  hgvsp: ENSP00000386618.1:p.Glu28Lys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.82G>A
  hgvsp: ENSP00000310371.2:p.Glu28Lys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23776G>A
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.82G>A
  hgvsp: ENSP00000409437.1:p.Glu28Lys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.326G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-124G>A
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14006
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu28Lys
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

2-102955327-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955327
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955327
    reference: chr 2
allele count: 2
allele frequency: 1.650600818698006e-5
allele num: 121168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.92C>T
  hgvsp: ENSP00000391120.1:p.Ala31Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.119C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.92C>T
  hgvsp: ENSP00000310371.2:p.Ala31Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-114C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.92C>T
  hgvsp: ENSP00000233954.1:p.Ala31Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23766C>T
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.92C>T
  hgvsp: ENSP00000377052.3:p.Ala31Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.92C>T
  hgvsp: ENSP00000409437.1:p.Ala31Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.88C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.336C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.92C>T
  hgvsp: ENSP00000386618.1:p.Ala31Val
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24492
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala31Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/2-102955350-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955350
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955350
    reference: chr 2
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.115C>A
  hgvsp: ENSP00000391120.1:p.Gln39Lys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.115C>A
  hgvsp: ENSP00000310371.2:p.Gln39Lys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.359C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-91C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.115C>A
  hgvsp: ENSP00000386618.1:p.Gln39Lys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.142C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.115C>A
  hgvsp: ENSP00000233954.1:p.Gln39Lys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.115C>A
  hgvsp: ENSP00000377052.3:p.Gln39Lys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.111C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23743C>A
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: incomplete_terminal_codon_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000409437
  ensembl transcript: ENST00000447231
  gene symbol: IL1RL1
  hgvsc: ENST00000447231.1:c.115C>A
  hgvsp: ENST00000447231.1:c.115C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14051
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln39Lys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

2-102955360-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955360
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955360
    reference: chr 2
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.125C>G
  hgvsp: ENSP00000377052.3:p.Pro42Arg
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.125C>G
  hgvsp: ENSP00000233954.1:p.Pro42Arg
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.125C>G
  hgvsp: ENSP00000386618.1:p.Pro42Arg
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.152C>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.125C>G
  hgvsp: ENSP00000310371.2:p.Pro42Arg
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.125C>G
  hgvsp: ENSP00000391120.1:p.Pro42Arg
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-81C>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.369C>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.121C>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23733C>G
  variant of: http://identifiers.org/hgnc/5988
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro42Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/2-102955369-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955369
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955369
    reference: chr 2
allele count: 4
allele frequency: 3.297663605335619e-5
allele num: 121298
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.134C>A
  hgvsp: ENSP00000233954.1:p.Thr45Asn
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.134C>A
  hgvsp: ENSP00000310371.2:p.Thr45Asn
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.134C>A
  hgvsp: ENSP00000386618.1:p.Thr45Asn
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.134C>A
  hgvsp: ENSP00000391120.1:p.Thr45Asn
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.161C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.130C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-72C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.134C>A
  hgvsp: ENSP00000377052.3:p.Thr45Asn
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23724C>A
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.378C>A
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4318
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr45Asn
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD

2-102955370-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955370
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955370
    reference: chr 2
allele count: 14
allele frequency: 1.154258388985077e-4
allele num: 121290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.135C>T
  hgvsp: ENST00000311734.2:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.135C>T
  hgvsp: ENST00000233954.1:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.135C>T
  hgvsp: ENST00000393393.3:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.131C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.379C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.162C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.135C>T
  hgvsp: ENST00000427077.1:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-71C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23723C>T
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.135C>T
  hgvsp: ENST00000409584.1:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr45Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

2-102955371-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955371
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955371
    reference: chr 2
allele count: 3
allele frequency: 2.473288484368817e-5
allele num: 121296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-70G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.380G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23722G>A
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.136G>A
  hgvsp: ENSP00000310371.2:p.Val46Met
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.136G>A
  hgvsp: ENSP00000233954.1:p.Val46Met
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.132G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.136G>A
  hgvsp: ENSP00000377052.3:p.Val46Met
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.136G>A
  hgvsp: ENSP00000391120.1:p.Val46Met
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.163G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.136G>A
  hgvsp: ENSP00000386618.1:p.Val46Met
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val46Met
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-102955374-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955374
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955374
    reference: chr 2
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-67G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.135G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.139G>A
  hgvsp: ENSP00000233954.1:p.Asp47Asn
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.139G>A
  hgvsp: ENSP00000310371.2:p.Asp47Asn
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.139G>A
  hgvsp: ENSP00000391120.1:p.Asp47Asn
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.139G>A
  hgvsp: ENSP00000377052.3:p.Asp47Asn
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.383G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.139G>A
  hgvsp: ENSP00000386618.1:p.Asp47Asn
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.166G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23719G>A
  variant of: http://identifiers.org/hgnc/5988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp47Asn
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

2-102955379-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955379
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955379
    reference: chr 2
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.144G>C
  hgvsp: ENSP00000386618.1:p.Trp48Cys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.140G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.144G>C
  hgvsp: ENSP00000310371.2:p.Trp48Cys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.171G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.144G>C
  hgvsp: ENSP00000391120.1:p.Trp48Cys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.144G>C
  hgvsp: ENSP00000377052.3:p.Trp48Cys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.144G>C
  hgvsp: ENSP00000233954.1:p.Trp48Cys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.388G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23714G>C
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-62G>C
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Trp48Cys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/2-102955387-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955387
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955387
    reference: chr 2
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-54C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.152C>A
  hgvsp: ENSP00000386618.1:p.Ser51Ter
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.396C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.179C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.148C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.152C>A
  hgvsp: ENSP00000377052.3:p.Ser51Ter
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23706C>A
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.152C>A
  hgvsp: ENSP00000233954.1:p.Ser51Ter
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.152C>A
  hgvsp: ENSP00000310371.2:p.Ser51Ter
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.152C>A
  hgvsp: ENSP00000391120.1:p.Ser51Ter
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser51Ter
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/2-102955387-CACAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955387
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955383
    reference: chr 2
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.162_165delCAAA
  hgvsp: ENSP00000310371.2:p.Asn54LysfsTer18
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.189_192delCAAA
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.406_409delCAAA
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.162_165delCAAA
  hgvsp: ENSP00000386618.1:p.Asn54LysfsTer18
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.162_165delCAAA
  hgvsp: ENSP00000377052.3:p.Asn54LysfsTer18
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23696_-28-23693delCAAA
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.162_165delCAAA
  hgvsp: ENSP00000391120.1:p.Asn54LysfsTer18
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.162_165delCAAA
  hgvsp: ENSP00000233954.1:p.Asn54LysfsTer18
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-44_-146-41delCAAA
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.158_161delCAAA
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4316
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn54LysfsTer18
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: CACAA
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

2-102955402-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955402
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955402
    reference: chr 2
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.411G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.167G>A
  hgvsp: ENSP00000377052.3:p.Ser56Asn
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.167G>A
  hgvsp: ENSP00000391120.1:p.Ser56Asn
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-39G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.167G>A
  hgvsp: ENSP00000310371.2:p.Ser56Asn
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.194G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.167G>A
  hgvsp: ENSP00000233954.1:p.Ser56Asn
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.167G>A
  hgvsp: ENSP00000386618.1:p.Ser56Asn
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23691G>A
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.163G>A
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9326
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser56Asn
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

2-102955402-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955402
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955402
    reference: chr 2
allele count: 3
allele frequency: 2.472473132458627e-5
allele num: 121336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.167G>T
  hgvsp: ENSP00000391120.1:p.Ser56Ile
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.194G>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-39G>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.163G>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.167G>T
  hgvsp: ENSP00000377052.3:p.Ser56Ile
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23691G>T
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.167G>T
  hgvsp: ENSP00000310371.2:p.Ser56Ile
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.167G>T
  hgvsp: ENSP00000233954.1:p.Ser56Ile
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.167G>T
  hgvsp: ENSP00000386618.1:p.Ser56Ile
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.411G>T
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser56Ile
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

2-102955407-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955407
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955407
    reference: chr 2
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.172C>T
  hgvsp: ENSP00000233954.1:p.Pro58Ser
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.172C>T
  hgvsp: ENSP00000386618.1:p.Pro58Ser
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.199C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.172C>T
  hgvsp: ENSP00000391120.1:p.Pro58Ser
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.172C>T
  hgvsp: ENSP00000377052.3:p.Pro58Ser
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.168C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-34C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.172C>T
  hgvsp: ENSP00000310371.2:p.Pro58Ser
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.416C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23686C>T
  variant of: http://identifiers.org/hgnc/5988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9326
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3405
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro58Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

2-102955408-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955408
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955408
    reference: chr 2
allele count: 37
allele frequency: 3.04953432786615e-4
allele num: 121330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.173C>T
  hgvsp: ENSP00000310371.2:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.417C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-33C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.169C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.173C>T
  hgvsp: ENSP00000233954.1:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.173C>T
  hgvsp: ENSP00000391120.1:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.173C>T
  hgvsp: ENSP00000377052.3:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.200C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23685C>T
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.173C>T
  hgvsp: ENSP00000386618.1:p.Pro58Leu
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 9.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 4514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24494
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9323
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7298
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro58Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

2-102955411-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955411
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955411
    reference: chr 2
allele count: 5
allele frequency: 4.120720631624058e-5
allele num: 121338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-30C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.172C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.176C>T
  hgvsp: ENSP00000310371.2:p.Thr59Ile
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.176C>T
  hgvsp: ENSP00000377052.3:p.Thr59Ile
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.176C>T
  hgvsp: ENSP00000386618.1:p.Thr59Ile
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.176C>T
  hgvsp: ENSP00000233954.1:p.Thr59Ile
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.420C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23682C>T
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.203C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.176C>T
  hgvsp: ENSP00000391120.1:p.Thr59Ile
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 24498
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr59Ile
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

2-102955413-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955413
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955413
    reference: chr 2
allele count: 2
allele frequency: 1.648288252649623e-5
allele num: 121338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.178C>T
  hgvsp: ENSP00000377052.3:p.Gln60Ter
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.205C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.178C>T
  hgvsp: ENSP00000233954.1:p.Gln60Ter
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-28C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.178C>T
  hgvsp: ENSP00000386618.1:p.Gln60Ter
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.178C>T
  hgvsp: ENSP00000391120.1:p.Gln60Ter
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.174C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.178C>T
  hgvsp: ENSP00000310371.2:p.Gln60Ter
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.422C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23680C>T
  variant of: http://identifiers.org/hgnc/5988
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln60Ter
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

2-102955414-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955414
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955414
    reference: chr 2
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.179A>G
  hgvsp: ENSP00000391120.1:p.Gln60Arg
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.175A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23679A>G
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.179A>G
  hgvsp: ENSP00000310371.2:p.Gln60Arg
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.206A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.179A>G
  hgvsp: ENSP00000233954.1:p.Gln60Arg
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.179A>G
  hgvsp: ENSP00000377052.3:p.Gln60Arg
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-27A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.423A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.179A>G
  hgvsp: ENSP00000386618.1:p.Gln60Arg
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln60Arg
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

2-102955419-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955419
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955419
    reference: chr 2
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.184A>G
  hgvsp: ENSP00000310371.2:p.Arg62Gly
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.184A>G
  hgvsp: ENSP00000233954.1:p.Arg62Gly
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.184A>G
  hgvsp: ENSP00000391120.1:p.Arg62Gly
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.184A>G
  hgvsp: ENSP00000377052.3:p.Arg62Gly
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-22A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.180A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.184A>G
  hgvsp: ENSP00000386618.1:p.Arg62Gly
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.211A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23674A>G
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.428A>G
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg62Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/2-102955425-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955425
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955425
    reference: chr 2
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.190C>A
  hgvsp: ENSP00000386618.1:p.Arg64Ser
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.190C>A
  hgvsp: ENSP00000391120.1:p.Arg64Ser
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.190C>A
  hgvsp: ENSP00000310371.2:p.Arg64Ser
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.190C>A
  hgvsp: ENSP00000377052.3:p.Arg64Ser
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-16C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.190C>A
  hgvsp: ENSP00000233954.1:p.Arg64Ser
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.186C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.434C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.217C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23668C>A
  variant of: http://identifiers.org/hgnc/5988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14051
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7291
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg64Ser
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

2-102955425-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955425
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955425
    reference: chr 2
allele count: 19
allele frequency: 1.565873840017142e-4
allele num: 121338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.190C>T
  hgvsp: ENSP00000310371.2:p.Arg64Cys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.190C>T
  hgvsp: ENSP00000233954.1:p.Arg64Cys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23668C>T
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.186C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.190C>T
  hgvsp: ENSP00000391120.1:p.Arg64Cys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.434C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.190C>T
  hgvsp: ENSP00000377052.3:p.Arg64Cys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.190C>T
  hgvsp: ENSP00000386618.1:p.Arg64Cys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.217C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-16C>T
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9316
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14051
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 9.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg64Cys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

2-102955430-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955430
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955430
    reference: chr 2
allele count: 3
allele frequency: 2.472432378974435e-5
allele num: 121338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23663G>A
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.195G>A
  hgvsp: ENST00000393393.3:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.195G>A
  hgvsp: ENST00000311734.2:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.191G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.195G>A
  hgvsp: ENST00000427077.1:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.195G>A
  hgvsp: ENST00000409584.1:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-11G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.195G>A
  hgvsp: ENST00000233954.1:c.195G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.439G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.222G>A
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2853
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val65Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

2-102955431-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955431
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955431
    reference: chr 2
allele count: 11
allele frequency: 9.065286545466533e-5
allele num: 121342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.196T>C
  hgvsp: ENSP00000386618.1:p.Phe66Leu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.196T>C
  hgvsp: ENSP00000391120.1:p.Phe66Leu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.196T>C
  hgvsp: ENSP00000310371.2:p.Phe66Leu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.192T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23662T>C
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.196T>C
  hgvsp: ENSP00000233954.1:p.Phe66Leu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.196T>C
  hgvsp: ENSP00000377052.3:p.Phe66Leu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.440T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.223T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-10T>C
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 24484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9305
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4311
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Phe66Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-102955435-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955435
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955435
    reference: chr 2
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.200C>T
  hgvsp: ENSP00000391120.1:p.Ala67Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.200C>T
  hgvsp: ENSP00000386618.1:p.Ala67Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.200C>T
  hgvsp: ENSP00000310371.2:p.Ala67Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.196C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.227C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.444C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.200C>T
  hgvsp: ENSP00000377052.3:p.Ala67Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-6C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.200C>T
  hgvsp: ENSP00000233954.1:p.Ala67Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23658C>T
  variant of: http://identifiers.org/hgnc/5988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9302
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24486
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14052
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23798
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala67Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

2-102955440-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955440
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955440
    reference: chr 2
allele count: 3
allele frequency: 2.472473132458627e-5
allele num: 121336
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.205G>A
  hgvsp: ENSP00000233954.1:p.Gly69Ser
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.205G>A
  hgvsp: ENSP00000391120.1:p.Gly69Ser
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.201G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.205G>A
  hgvsp: ENSP00000310371.2:p.Gly69Ser
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.205G>A
  hgvsp: ENSP00000386618.1:p.Gly69Ser
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.205G>A
  hgvsp: ENSP00000377052.3:p.Gly69Ser
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.449G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-146-1G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23653G>A
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.232G>A
  variant of: http://identifiers.org/hgnc/5998
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14051
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4517
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5055
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
hgvs: c.-146-1G>A
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

2-102955445-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955445
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955445
    reference: chr 2
allele count: 2
allele frequency: 1.648424106554134e-5
allele num: 121328
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.210A>G
  hgvsp: ENST00000427077.1:c.210A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.210A>G
  hgvsp: ENST00000393393.3:c.210A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.210A>G
  hgvsp: ENST00000311734.2:c.210A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.237A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.210A>G
  hgvsp: ENST00000409584.1:c.210A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.206A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23648A>G
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.210A>G
  hgvsp: ENST00000233954.1:c.210A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.454A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-142A>G
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14042
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24471
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23786
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln70Gln
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

2-102955462-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955462
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955462
    reference: chr 2
allele count: 1
allele frequency: 8.24551856066228e-6
allele num: 121278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.227C>T
  hgvsp: ENSP00000386618.1:p.Pro76Leu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.227C>T
  hgvsp: ENSP00000310371.2:p.Pro76Leu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.227C>T
  hgvsp: ENSP00000391120.1:p.Pro76Leu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.227C>T
  hgvsp: ENSP00000377052.3:p.Pro76Leu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23631C>T
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.223C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.254C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.227C>T
  hgvsp: ENSP00000233954.1:p.Pro76Leu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.471C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-125C>T
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24434
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14023
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro76Leu
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-102955468-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955468
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955468
    reference: chr 2
allele count: 27929
allele frequency: 2.30357466884413e-1
allele num: 121242
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.233C>A
  hgvsp: ENSP00000233954.1:p.Ala78Glu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.233C>A
  hgvsp: ENSP00000391120.1:p.Ala78Glu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.260C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.233C>A
  hgvsp: ENSP00000310371.2:p.Ala78Glu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.233C>A
  hgvsp: ENSP00000377052.3:p.Ala78Glu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.477C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.233C>A
  hgvsp: ENSP00000386618.1:p.Ala78Glu
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.229C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-119C>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23625C>A
  variant of: http://identifiers.org/hgnc/5988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2715
  bin: 3.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 9.25e1
  variant carriers: 421
genotype depth: GenotypeDepth
  all individuals: 8852
  bin: 2.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5664
  bin: 3.25e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.25e1
  variant carriers: 222
genotype depth: GenotypeDepth
  all individuals: 15081
  bin: 2.25e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 4.75e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 4.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 22155
  bin: 9.75e1
  variant carriers: 21642
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 8.75e1
  variant carriers: 382
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 8.25e1
  variant carriers: 290
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 5.75e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 5.25e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 151
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 7.75e1
  variant carriers: 258
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2514
  bin: 8.25e1
  variant carriers: 4
hgvs: p.Ala78Glu
num of homozygotes: 3824
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

2-102955473-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955473
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955473
    reference: chr 2
allele count: 1
allele frequency: 8.253276550790664e-6
allele num: 121164
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.238G>A
  hgvsp: ENSP00000310371.2:p.Ala80Thr
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.238G>A
  hgvsp: ENSP00000377052.3:p.Ala80Thr
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.238G>A
  hgvsp: ENSP00000386618.1:p.Ala80Thr
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.265G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.238G>A
  hgvsp: ENSP00000391120.1:p.Ala80Thr
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23620G>A
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.238G>A
  hgvsp: ENSP00000233954.1:p.Ala80Thr
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-114G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.234G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.482G>A
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5940
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala80Thr
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

2-102955474-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955474
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955474
    reference: chr 2
allele count: 554
allele frequency: 4.572315209138028e-3
allele num: 121164
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.239C>T
  hgvsp: ENSP00000233954.1:p.Ala80Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.239C>T
  hgvsp: ENSP00000377052.3:p.Ala80Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.483C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-113C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.239C>T
  hgvsp: ENSP00000391120.1:p.Ala80Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.235C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.239C>T
  hgvsp: ENSP00000386618.1:p.Ala80Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.239C>T
  hgvsp: ENSP00000310371.2:p.Ala80Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.266C>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23619C>T
  variant of: http://identifiers.org/hgnc/5988
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15709
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13184
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10145
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5912
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 9.75e1
  variant carriers: 483
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala80Val
num of homozygotes: 8
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

2-102955485-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955485
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955485
    reference: chr 2
allele count: 1
allele frequency: 8.260366760284156e-6
allele num: 121060
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-102A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.246A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23608A>G
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.250A>G
  hgvsp: ENSP00000386618.1:p.Ile84Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.277A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.250A>G
  hgvsp: ENSP00000377052.3:p.Ile84Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.250A>G
  hgvsp: ENSP00000233954.1:p.Ile84Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.491+3A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.250A>G
  hgvsp: ENSP00000310371.2:p.Ile84Val
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.250A>G
  hgvsp: ENSP00000391120.1:p.Ile84Val
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10233
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile84Val
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD

2-102955494-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955494
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955494
    reference: chr 2
allele count: 1
allele frequency: 8.270067318347971e-6
allele num: 120918
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.491+12T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.259T>C
  hgvsp: ENSP00000377052.3:p.Cys87Arg
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-93T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.259T>C
  hgvsp: ENSP00000310371.2:p.Cys87Arg
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.259T>C
  hgvsp: ENSP00000386618.1:p.Cys87Arg
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.255T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23599T>C
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.286T>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.259T>C
  hgvsp: ENSP00000233954.1:p.Cys87Arg
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.259T>C
  hgvsp: ENSP00000391120.1:p.Cys87Arg
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13135
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5984
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3067
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Cys87Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

2-102955495-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955495
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955495
    reference: chr 2
allele count: 1
allele frequency: 8.271161767381846e-6
allele num: 120902
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.260G>A
  hgvsp: ENSP00000377052.3:p.Cys87Tyr
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.287G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23598G>A
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.260G>A
  hgvsp: ENSP00000233954.1:p.Cys87Tyr
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-92G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.256G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.260G>A
  hgvsp: ENSP00000391120.1:p.Cys87Tyr
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.260G>A
  hgvsp: ENSP00000386618.1:p.Cys87Tyr
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.260G>A
  hgvsp: ENSP00000310371.2:p.Cys87Tyr
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.491+13G>A
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13126
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3762
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5984
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Cys87Tyr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: DP

2-102955504-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955504
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955504
    reference: chr 2
allele count: 1
allele frequency: 8.281985026171072e-6
allele num: 120744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.269G>A
  hgvsp: ENSP00000391120.1:p.Arg90Lys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.269G>A
  hgvsp: ENSP00000233954.1:p.Arg90Lys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23589G>A
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.269G>A
  hgvsp: ENSP00000386618.1:p.Arg90Lys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.265G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.296G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.269G>A
  hgvsp: ENSP00000310371.2:p.Arg90Lys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.491+22G>A
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.269G>A
  hgvsp: ENSP00000377052.3:p.Arg90Lys
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-83G>A
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3761
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5983
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg90Lys
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

2-102955510-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955510
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955510
    reference: chr 2
allele count: 1
allele frequency: 8.291873963515755e-6
allele num: 120600
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.272+3A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23583A>T
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.491+28A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.272+3A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-80+3A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.272+3A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.272+3A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.268+3A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.272+3A>T
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.302A>T
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3750
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
hgvs: c.272+3A>T
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-102955511-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955511
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955511
    reference: chr 2
allele count: 1
allele frequency: 8.29228651508367e-6
allele num: 120594
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.272+4T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.272+4T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.268+4T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.303T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-80+4T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.272+4T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.272+4T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.272+4T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23582T>G
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.491+29T>G
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5958
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
hgvs: c.272+4T>G
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS

2-102955513-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955513
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955513
    reference: chr 2
allele count: 1
allele frequency: 8.297928836962294e-6
allele num: 120512
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.268+6A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.305A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.272+6A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.272+6A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.272+6A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.272+6A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.272+6A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-80+6A>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23580A>G
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.491+31A>G
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5957
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
hgvs: c.272+6A>G
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-102955514-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955514
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955514
    reference: chr 2
allele count: 1
allele frequency: 8.303716743614441e-6
allele num: 120428
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.272+7T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23579T>G
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.272+7T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.268+7T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-80+7T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.272+7T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.306T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.491+32T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.272+7T>G
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.272+7T>G
  variant of: http://identifiers.org/hgnc/5998
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10098
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12845
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3731
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5959
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20071
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 3.75e1
  variant carriers: 0
hgvs: c.272+7T>G
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

2-102955522-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955522
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955522
    reference: chr 2
allele count: 1
allele frequency: 8.700191404210892e-6
allele num: 114940
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-80+15G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.314G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.272+15G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.272+15G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.491+40G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.268+15G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.272+15G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.272+15G>C
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23571G>C
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.272+15G>C
  variant of: http://identifiers.org/hgnc/5998
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12650
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3794
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6510
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

2-102955523-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955523
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955522
    reference: chr 2
allele count: 3259
allele frequency: 2.711314475873544e-2
allele num: 120200
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000386618
  ensembl transcript: ENST00000409584
  gene symbol: IL1RL1
  hgvsc: ENST00000409584.1:c.272+17delT
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000310371
  ensembl transcript: ENST00000311734
  gene symbol: IL1RL1
  hgvsc: ENST00000311734.2:c.272+17delT
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000384822
  ensembl transcript: ENST00000404917
  gene symbol: IL1RL1
  hgvsc: ENST00000404917.2:c.-80+17delT
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115604
  ensembl protein: ENSP00000386663
  ensembl transcript: ENST00000410040
  gene symbol: IL18R1
  hgvsc: ENST00000410040.1:c.-28-23569delT
  variant of: http://identifiers.org/hgnc/5988
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000473175
  gene symbol: IL1RL1
  hgvsc: ENST00000473175.1:n.491+42delT
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000463990
  gene symbol: IL1RL1
  hgvsc: ENST00000463990.1:n.316delT
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000377052
  ensembl transcript: ENST00000393393
  gene symbol: IL1RL1
  hgvsc: ENST00000393393.3:c.272+17delT
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000391120
  ensembl transcript: ENST00000427077
  gene symbol: IL1RL1
  hgvsc: ENST00000427077.1:c.272+17delT
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl protein: ENSP00000233954
  ensembl transcript: ENST00000233954
  gene symbol: IL1RL1
  hgvsc: ENST00000233954.1:c.272+17delT
  variant of: http://identifiers.org/hgnc/5998
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000115602
  ensembl transcript: ENST00000482701
  gene symbol: IL1RL1
  hgvsc: ENST00000482701.1:n.268+17delT
  variant of: http://identifiers.org/hgnc/5998
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 5.75e1
  variant carriers: 250
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 1.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.25e1
  variant carriers: 198
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 6.25e1
  variant carriers: 245
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 1.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.75e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 3818
  bin: 4.25e1
  variant carriers: 191
genotype depth: GenotypeDepth
  all individuals: 14714
  bin: 2.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9994
  bin: 3.25e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 138
genotype depth: GenotypeDepth
  all individuals: 12615
  bin: 2.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 9.25e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 6.75e1
  variant carriers: 235
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 4.75e1
  variant carriers: 208
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 474
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 8.75e1
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 5.25e1
  variant carriers: 230
genotype depth: GenotypeDepth
  all individuals: 5988
  bin: 3.75e1
  variant carriers: 143
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 288
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: CT
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD

2-102955530-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 102955530
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 102955530
allele count: 1
allele frequency: 8.338336335134414e-6
allele num: 119928
alternate allele: G
canonical: false
consequence: non coding transcript exon
filter: PASS
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13036
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34744
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2192
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3422
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3787
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1911
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.008712633318311e-5
allele num: 66570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 2.291e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.512e0

DP
type: SiteQuality
SIO_000300: 2.269298e6

QD
type: SiteQuality
SIO_000300: 9.300000000000001e0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1910
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34655
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3786
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2187
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13023
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.712319219376198e-5
allele num: 11478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502855425308085e-5
allele num: 66540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.42e-1

FS
type: SiteQuality
SIO_000300: 4.674e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.657e0

QD
type: SiteQuality
SIO_000300: 1.153e1

DP
type: SiteQuality
SIO_000300: 2.267933e6

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3786
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1910
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2187
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 34655
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13023
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.070171178827243e-5
allele num: 16474
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.657e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.02e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.267933e6

FS
type: SiteQuality
SIO_000300: 4.674e0

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

MQRankSum
type: SiteQuality
SIO_000300: 2.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-1

QD
type: SiteQuality
SIO_000300: 1.153e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

GenotypeQuality
all individuals: 454
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13008
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1910
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34543
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3787
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2183
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3416
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503488092374308e-5
allele num: 66512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 7.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

DP
type: SiteQuality
SIO_000300: 2.26652e6

VQSLOD
type: SiteQuality
SIO_000300: 3.18e0

QD
type: SiteQuality
SIO_000300: 1.332e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.11e-1

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3416
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1910
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34543
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13008
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3787
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2183
bin: 9.75e1
variant carriers: 8

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.058770069675856e-4
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.517440461871541e-5
allele num: 66512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.18e0

DP
type: SiteQuality
SIO_000300: 2.26652e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.05e0

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-3

FS
type: SiteQuality
SIO_000300: 7.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

QD
type: SiteQuality
SIO_000300: 1.332e1

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2173
bin: 9.75e1
variant carriers: 10

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1911
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3785
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66444
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 10
allele frequency: 1.158480074142725e-3
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-1

QD
type: SiteQuality
SIO_000300: 1.365e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

FS
type: SiteQuality
SIO_000300: 7.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-1

DP
type: SiteQuality
SIO_000300: 2.264514e6

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31524
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2145
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.092360180333861e-5
allele num: 16414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65916
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 7.807e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.12e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

MQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e-1

QD
type: SiteQuality
SIO_000300: 7.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.3e-2

DP
type: SiteQuality
SIO_000300: 2.19636e6

VQSLOD
type: SiteQuality
SIO_000300: -8.727e-1

GenotypeQuality
all individuals: 12038
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.102770657878677e-5
allele num: 16386
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.001001001001001e-4
allele num: 9990
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65822
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.365e0

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e-1

MQ
type: SiteQuality
SIO_000300: 5.177e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 2.177337e6

FS
type: SiteQuality
SIO_000300: 3.641e0

GenotypeQuality
all individuals: 10543
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2916
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2101
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1739
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.131207847946045e-5
allele num: 16310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11324
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.088e1

VQSLOD
type: SiteQuality
SIO_000300: 8.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQ
type: SiteQuality
SIO_000300: 5.976e1

MQRankSum
type: SiteQuality
SIO_000300: -4.1e-1

FS
type: SiteQuality
SIO_000300: 2.573e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.792e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.81e-1

DP
type: SiteQuality
SIO_000300: 2.050202e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.4e-1

GenotypeQuality
all individuals: 1516
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 519
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variant carriers: 0

GenotypeQuality
all individuals: 2100
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2161
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1714
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8254
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11214
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9108
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.592661018028923e-5
allele num: 62788
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

MQRankSum
type: SiteQuality
SIO_000300: -8.69e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.452e0

VQSLOD
type: SiteQuality
SIO_000300: -3.599e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

DP
type: SiteQuality
SIO_000300: 1.896358e6

QD
type: SiteQuality
SIO_000300: 1.933e1

GenotypeQuality
all individuals: 173
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
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variant carriers: 0

GenotypeQuality
all individuals: 3236
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6300
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.580379520229145e-4
allele num: 11172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8954
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16024
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.846681e6

FS
type: SiteQuality
SIO_000300: 2.288e0

MQRankSum
type: SiteQuality
SIO_000300: -1.22e-1

QD
type: SiteQuality
SIO_000300: 1.474e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2801
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variant carriers: 0

GenotypeQuality
all individuals: 2106
bin: 9.75e1
variant carriers: 22

Latino
type: Population
allele count: 1
allele frequency: 9.07605736068252e-5
allele num: 11018
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6020
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 2.409638554216868e-3
allele num: 8300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15534
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.693106e6

MQ
type: SiteQuality
SIO_000300: 5.975e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.29e-1

QD
type: SiteQuality
SIO_000300: 1.848e1

VQSLOD
type: SiteQuality
SIO_000300: 3.97e0

GenotypeQuality
all individuals: 557
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 826
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5224
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6784
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 50888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10560
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.836210062431142e-4
allele num: 5446
num of homozygotes: 0

MQRankSum
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SIO_000300: -1.692e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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DP
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.43e-2

QD
type: SiteQuality
SIO_000300: 2.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.48e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14408
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5456
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.962785585302662e-5
allele num: 50948
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.894e1

VQSLOD
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e0

InbreedingCoeff
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SIO_000300: -1.43e-2

BaseQRankSum
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SIO_000300: 2.66e0

FS
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SIO_000300: 0.0e0

MQRankSum
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SIO_000300: 1.71e0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.284417e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4214
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6016
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.171835635479107e-5
allele num: 46044
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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FS
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -1.386e0

DP
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MQRankSum
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ReadPosRankSum
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QD
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ClippingRankSum
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SIO_000300: -2.96e-1

InbreedingCoeff
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SIO_000300: -1.82e-2

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 4.789e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8236
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.556226462074761e-5
allele num: 64258
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 3.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.52e-1

DP
type: SiteQuality
SIO_000300: 1.756333e6

VQSLOD
type: SiteQuality
SIO_000300: 1.66e-1

BaseQRankSum
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SIO_000300: -2.015e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.96e-1

QD
type: SiteQuality
SIO_000300: 1.443e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.495193556767992e-5
allele num: 15396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8258
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64498
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e0

VQSLOD
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ReadPosRankSum
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FS
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ClippingRankSum
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MQ
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MQRankSum
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SIO_000300: -1.528e0

InbreedingCoeff
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.805834e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15412
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8276
num of homozygotes: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 9.296272194849865e-5
allele num: 64542
num of homozygotes: 0

Latino
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allele frequency: 3.5650623885918e-4
allele num: 11220
num of homozygotes: 1

Other
type: Population
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allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.818149e6

ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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MQ
type: SiteQuality
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VQSLOD
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QD
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
type: Population
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East Asian
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allele count: 5
allele frequency: 5.860290670417253e-4
allele num: 8532
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65798
num of homozygotes: 0

DP
type: SiteQuality
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VQSLOD
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QD
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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MQ
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BaseQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65938
num of homozygotes: 0

East Asian
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allele count: 0
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Other
type: Population
allele count: 0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 1
allele frequency: 6.199628022318661e-5
allele num: 16130
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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QD
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ReadPosRankSum
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DP
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InbreedingCoeff
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MQ
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VQSLOD
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.023980162690133e-5
allele num: 66138
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.04e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.64e-1

DP
type: SiteQuality
SIO_000300: 1.900796e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

QD
type: SiteQuality
SIO_000300: 1.58e1

GenotypeDepth
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5024
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1974
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.272137227630969e-4
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16316
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.11e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

FS
type: SiteQuality
SIO_000300: 7.29e-1

QD
type: SiteQuality
SIO_000300: 1.264e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: 3.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.03e-1

DP
type: SiteQuality
SIO_000300: 1.903991e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.35e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11815
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507704369327262e-5
allele num: 66326
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e0

MQ
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SIO_000300: 6.0e1

VQSLOD
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SIO_000300: 4.4e-2

FS
type: SiteQuality
SIO_000300: 2.846e0

InbreedingCoeff
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SIO_000300: 6.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.99e-1

DP
type: SiteQuality
SIO_000300: 1.906567e6

QD
type: SiteQuality
SIO_000300: 9.51e0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1990
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.078288353999514e-5
allele num: 16452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66520
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.831e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ReadPosRankSum
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SIO_000300: 1.16e0

BaseQRankSum
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SIO_000300: 4.08e0

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: 6.99e-1

DP
type: SiteQuality
SIO_000300: 1.911771e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-2

QD
type: SiteQuality
SIO_000300: 1.623e1

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1991
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.642987249544627e-4
allele num: 16470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.005e1

FS
type: SiteQuality
SIO_000300: 6.74e-1

ClippingRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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SIO_000300: 2.0e-1

InbreedingCoeff
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SIO_000300: 4.0e-4

DP
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SIO_000300: 1.913162e6

MQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

QD
type: SiteQuality
SIO_000300: 1.285e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.54e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.926411096127914e-4
allele num: 10382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
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QD
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BaseQRankSum
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.962e1

ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 1.213150551983501e-4
allele num: 16486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
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MQRankSum
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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DP
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3411
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GenotypeQuality
all individuals: 23669
bin: 6.25e1
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GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5067
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.915363e6

FS
type: SiteQuality
SIO_000300: 9.217000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -1.995e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.383e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.46e0

MQRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -7.554e0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3411
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1992
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11847
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23680
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5066
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4311
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2855
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7293
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.976e1

DP
type: SiteQuality
SIO_000300: 1.915545e6

VQSLOD
type: SiteQuality
SIO_000300: 1.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 2.142e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e-1

QD
type: SiteQuality
SIO_000300: 1.492e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.225e0

GenotypeQuality
all individuals: 7297
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5066
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2856
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11846
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3410
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4314
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23733
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1994
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500330072615976e-5
allele num: 66652
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e0

FS
type: SiteQuality
SIO_000300: 1.335e0

MQRankSum
type: SiteQuality
SIO_000300: -1.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.21e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

QD
type: SiteQuality
SIO_000300: 1.066e1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e-1

DP
type: SiteQuality
SIO_000300: 1.916653e6

GenotypeDepth
all individuals: 2202
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5068
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3411
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7302
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4316
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2858
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11851
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23780
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1996
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.015e0

MQ
type: SiteQuality
SIO_000300: 5.909e1

QD
type: SiteQuality
SIO_000300: 1.433e1

FS
type: SiteQuality
SIO_000300: 2.607e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.597e0

DP
type: SiteQuality
SIO_000300: 1.91784e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.635e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7301
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11858
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5069
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3413
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23793
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4316
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1995
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2858
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.918431e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.511e0

VQSLOD
type: SiteQuality
SIO_000300: -7.058e0

FS
type: SiteQuality
SIO_000300: 3.6203e1

QD
type: SiteQuality
SIO_000300: 1.482e1

MQRankSum
type: SiteQuality
SIO_000300: -8.54e-1

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23794
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3413
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2858
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11861
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 5070
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7301
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1996
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.423361201987156e-4
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

FS
type: SiteQuality
SIO_000300: 2.058e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.151e0

DP
type: SiteQuality
SIO_000300: 1.918748e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.76e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11871
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 2856
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4318
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23790
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3411
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5069
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1995
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7299
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.349338900487126e-4
allele num: 11496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.049349403369911e-4
allele num: 66708
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211680600993578e-4
allele num: 16506
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 1.920628e6

FS
type: SiteQuality
SIO_000300: 5.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

QD
type: SiteQuality
SIO_000300: 1.359e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

GenotypeQuality
all individuals: 23787
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3407
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5069
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11870
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1997
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7300
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2857
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4317
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.739432944859976e-4
allele num: 11498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.35e0

DP
type: SiteQuality
SIO_000300: 1.919793e6

QD
type: SiteQuality
SIO_000300: 1.187e1

MQ
type: SiteQuality
SIO_000300: 5.96e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.039e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

GenotypeQuality
all individuals: 1997
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66716
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Latino
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allele frequency: 0.0e0
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Other
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African
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VQSLOD
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FS
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QD
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MQRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
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East Asian
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

InbreedingCoeff
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ReadPosRankSum
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QD
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MQ
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MQRankSum
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FS
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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MQ
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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FS
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DP
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QD
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MQRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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VQSLOD
type: SiteQuality
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MQRankSum
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FS
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MQ
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QD
type: SiteQuality
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ReadPosRankSum
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DP
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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MQ
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MQRankSum
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QD
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ReadPosRankSum
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DP
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VQSLOD
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FS
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.496402877697842e-5
allele num: 66720
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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DP
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MQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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ReadPosRankSum
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QD
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MQ
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
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African
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Latino
type: Population
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allele num: 11526
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Other
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East Asian
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allele count: 0
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South Asian
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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FS
type: SiteQuality
SIO_000300: 9.68e-1

ReadPosRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 37

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 28
allele frequency: 4.196642685851319e-4
allele num: 66720
num of homozygotes: 0

Latino
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allele frequency: 5.207429265752473e-4
allele num: 11522
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Other
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African
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South Asian
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MQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: 4.36e0

DP
type: SiteQuality
SIO_000300: 1.924845e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.285e1

FS
type: SiteQuality
SIO_000300: 1.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.81e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.84e-1

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5059
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2854
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1995
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7297
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3405
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4317
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11903
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 23791
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.494004796163069e-5
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.669e0

QD
type: SiteQuality
SIO_000300: 1.202e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.229e0

VQSLOD
type: SiteQuality
SIO_000300: 2.51e0

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-2

DP
type: SiteQuality
SIO_000300: 1.924723e6

GenotypeQuality
all individuals: 3405
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5060
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4317
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7296
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11903
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23791
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1995
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.137e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.254e0

MQ
type: SiteQuality
SIO_000300: 5.988e1

VQSLOD
type: SiteQuality
SIO_000300: -1.855e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.825e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e-1

FS
type: SiteQuality
SIO_000300: 1.582e1

MQRankSum
type: SiteQuality
SIO_000300: -2.62e-1

DP
type: SiteQuality
SIO_000300: 1.924963e6

GenotypeQuality
all individuals: 23798
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1995
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5060
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3406
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7297
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11904
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4317
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2854
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

QD
type: SiteQuality
SIO_000300: 1.082e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e0

FS
type: SiteQuality
SIO_000300: 4.373e0

DP
type: SiteQuality
SIO_000300: 1.925021e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

VQSLOD
type: SiteQuality
SIO_000300: 9.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 5060
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3406
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2854
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11904
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1996
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7297
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4315
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23802
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.04e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.01e-1

QD
type: SiteQuality
SIO_000300: 1.656e1

DP
type: SiteQuality
SIO_000300: 1.925052e6

FS
type: SiteQuality
SIO_000300: 8.039999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-1

GenotypeQuality
all individuals: 23789
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1994
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5057
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2852
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4314
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3404
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11921
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.2e0

FS
type: SiteQuality
SIO_000300: 5.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.07e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 1.928007e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

QD
type: SiteQuality
SIO_000300: 1.16e1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2852
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5057
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23789
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3404
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4314
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1994
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11921
bin: 9.75e1
variant carriers: 19

GenotypeQuality
all individuals: 7291
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.537205081669691e-4
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.09851005785892e-4
allele num: 66714
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73370319001387e-4
allele num: 11536
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

FS
type: SiteQuality
SIO_000300: 5.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.07e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.16e1

DP
type: SiteQuality
SIO_000300: 1.928007e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
type: SiteQuality
SIO_000300: 2.2e0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5056
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7284
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11918
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 23789
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4311
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3405
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1993
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496942079386017e-5
allele num: 66712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.894e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

MQRankSum
type: SiteQuality
SIO_000300: -9.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.94e-1

QD
type: SiteQuality
SIO_000300: 1.359e1

FS
type: SiteQuality
SIO_000300: 5.979e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.71e-1

DP
type: SiteQuality
SIO_000300: 1.926882e6

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11929
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2853
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5057
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7282
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3405
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1993
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23793
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 11
allele frequency: 9.532062391681109e-4
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.82e-1

FS
type: SiteQuality
SIO_000300: 5.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

QD
type: SiteQuality
SIO_000300: 1.569e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.928562e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.14e0

GenotypeQuality
all individuals: 2852
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11921
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.927262e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.49e-1

FS
type: SiteQuality
SIO_000300: 6.701e0

MQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.418e0

MQ
type: SiteQuality
SIO_000300: 5.983e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.93e-1

QD
type: SiteQuality
SIO_000300: 1.359e1

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817300702689605e-4
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.341e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.106e0

FS
type: SiteQuality
SIO_000300: 5.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.76e-1

DP
type: SiteQuality
SIO_000300: 1.927747e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.03e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.48e-1

GenotypeQuality
all individuals: 11923
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1993
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2851
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5059
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.957e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.396e1

VQSLOD
type: SiteQuality
SIO_000300: 3.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

FS
type: SiteQuality
SIO_000300: 4.976e0

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

DP
type: SiteQuality
SIO_000300: 1.927315e6

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7268
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 5058
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23713
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11924
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1993
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3401
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4309
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2850
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.946e0

VQSLOD
type: SiteQuality
SIO_000300: 5.49e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQ
type: SiteQuality
SIO_000300: 5.988e1

DP
type: SiteQuality
SIO_000300: 1.926544e6

FS
type: SiteQuality
SIO_000300: 2.848e0

QD
type: SiteQuality
SIO_000300: 1.347e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.1e-2

GenotypeQuality
all individuals: 86
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1130
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variant carriers: 3

GenotypeQuality
all individuals: 7
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variant carriers: 2

GenotypeQuality
all individuals: 11
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variant carriers: 2

GenotypeQuality
all individuals: 14
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variant carriers: 2

GenotypeQuality
all individuals: 2
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variant carriers: 1

GenotypeQuality
all individuals: 2041
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 26
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variant carriers: 10

GenotypeQuality
all individuals: 4443
bin: 6.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2958
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 15424
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 30345
bin: 9.75e1
variant carriers: 24047

GenotypeQuality
all individuals: 1636
bin: 9.25e1
variant carriers: 8

East Asian
type: Population
allele count: 1082
allele frequency: 1.251156336725254e-1
allele num: 8648
num of homozygotes: 64

South Asian
type: Population
allele count: 2406
allele frequency: 1.457828405235095e-1
allele num: 16504
num of homozygotes: 166

European (Finnish)
type: Population
allele count: 1356
allele frequency: 2.051437216338881e-1
allele num: 6610
num of homozygotes: 141

Other
type: Population
allele count: 220
allele frequency: 2.422907488986784e-1
allele num: 908
num of homozygotes: 34

African
type: Population
allele count: 5055
allele frequency: 4.862447095036552e-1
allele num: 10396
num of homozygotes: 1253

Latino
type: Population
allele count: 1622
allele frequency: 1.408475164987843e-1
allele num: 11516
num of homozygotes: 133

European (Non-Finnish)
type: Population
allele count: 16188
allele frequency: 2.428442844284429e-1
allele num: 66660
num of homozygotes: 2033

VQSLOD
type: SiteQuality
SIO_000300: 4.73e0

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.579e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.270000000000001e-2

DP
type: SiteQuality
SIO_000300: 5.049583e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.33e-1

FS
type: SiteQuality
SIO_000300: 1.268e0

QD
type: SiteQuality
SIO_000300: 1.569e1

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1992
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3062
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GenotypeQuality
all individuals: 3148
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 14784
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4762
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501185936890143e-5
allele num: 66614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.786e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.204e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

FS
type: SiteQuality
SIO_000300: 3.753e0

QD
type: SiteQuality
SIO_000300: 3.221e1

DP
type: SiteQuality
SIO_000300: 2.245419e6

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.03e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.909e0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 7025
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GenotypeQuality
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GenotypeQuality
all individuals: 25
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GenotypeQuality
all individuals: 5
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 15120
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variant carriers: 546

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 21246
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variant carriers: 0

GenotypeQuality
all individuals: 3125
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1973
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 1.541128876902331e-3
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 43
allele frequency: 2.606376530488544e-3
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.692628650904034e-4
allele num: 11504
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 283
allele frequency: 3.271676300578034e-2
allele num: 8650
num of homozygotes: 6

European (Non-Finnish)
type: Population
allele count: 200
allele frequency: 3.002462018855461e-3
allele num: 66612
num of homozygotes: 2

MQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.97e0

QD
type: SiteQuality
SIO_000300: 1.365e1

MQ
type: SiteQuality
SIO_000300: 5.975e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.98e-2

FS
type: SiteQuality
SIO_000300: 6.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.471e0

DP
type: SiteQuality
SIO_000300: 2.299932e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 3068
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GenotypeQuality
all individuals: 14782
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variant carriers: 1

GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 3143
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 4753
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.06501698204755e-5
allele num: 16488
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 1.69e-2

BaseQRankSum
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SIO_000300: 3.99e0

ReadPosRankSum
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SIO_000300: 1.13e0

DP
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ClippingRankSum
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VQSLOD
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MQ
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SIO_000300: 6.0e1

FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -7.88e-1

QD
type: SiteQuality
SIO_000300: 1.466e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

South Asian
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allele frequency: 6.068697657482704e-5
allele num: 16478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.91e-1

InbreedingCoeff
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SIO_000300: 1.33e-2

QD
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SIO_000300: 1.416e1

BaseQRankSum
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SIO_000300: -5.119e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 3.35e-1

ClippingRankSum
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SIO_000300: 8.129999999999999e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66480
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.68429207824908e-5
allele num: 10326
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 8646
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South Asian
type: Population
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FS
type: SiteQuality
SIO_000300: 9.69e-1

MQRankSum
type: SiteQuality
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ClippingRankSum
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SIO_000300: 6.5e-1

BaseQRankSum
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SIO_000300: -1.641e0

InbreedingCoeff
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ReadPosRankSum
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QD
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MQ
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VQSLOD
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.081245439065921e-5
allele num: 16444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66410
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
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ReadPosRankSum
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SIO_000300: 1.51e0

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.0446e1

DP
type: SiteQuality
SIO_000300: 2.227684e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -8.538e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.45e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66344
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South Asian
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allele num: 16408
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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FS
type: SiteQuality
SIO_000300: 1.577e0

BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 9.69e-1

InbreedingCoeff
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MQ
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507340749449821e-5
allele num: 66342
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
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DP
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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QD
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ReadPosRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
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allele frequency: 0.0e0
allele num: 66316
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

Latino
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allele num: 11440
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European (Finnish)
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African
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South Asian
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
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QD
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VQSLOD
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DP
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 8630
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 8.744316194473592e-5
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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African
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DP
type: SiteQuality
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BaseQRankSum
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QD
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MQ
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ReadPosRankSum
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MQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 86
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3976
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2983
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2436
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19077
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13859
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4524
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2923
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6680
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517174414370676e-5
allele num: 65912
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.77e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.199721e6

VQSLOD
type: SiteQuality
SIO_000300: -7.468e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.038e0

QD
type: SiteQuality
SIO_000300: 8.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.04e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.63e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 79
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 464
bin: 3.25e1
variant carriers: 5

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16616
bin: 9.75e1
variant carriers: 2929

GenotypeQuality
all individuals: 2915
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 6414
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1920
bin: 8.75e1
variant carriers: 6

GenotypeQuality
all individuals: 110
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3964
bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 1027
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18580
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2961
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 139
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4495
bin: 7.75e1
variant carriers: 6

East Asian
type: Population
allele count: 650
allele frequency: 7.547607988852764e-2
allele num: 8612
num of homozygotes: 25

Latino
type: Population
allele count: 134
allele frequency: 1.173791170287316e-2
allele num: 11416
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 140
allele frequency: 2.117042189626493e-3
allele num: 66130
num of homozygotes: 1

South Asian
type: Population
allele count: 34
allele frequency: 2.087170042971148e-3
allele num: 16290
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 25
allele frequency: 3.791325447376403e-3
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 2262
allele frequency: 2.205538221528861e-1
allele num: 10256
num of homozygotes: 259

Other
type: Population
allele count: 14
allele frequency: 1.552106430155211e-2
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.048e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.503e-1

MQ
type: SiteQuality
SIO_000300: 6.037e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.91e0

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-1

DP
type: SiteQuality
SIO_000300: 2.189492e6

QD
type: SiteQuality
SIO_000300: 1.675e1