1-93701986-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93701986
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93701986
    reference: chr 1
allele count: 4
allele frequency: 3.386616093199675e-5
allele num: 118112
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2761+39A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.443-2881A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2603+39A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1868+39A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2600+39A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.2957+39A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.488+39A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1628+39A>G
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5247
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3047
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3913
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3715
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 5236
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2615
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1970
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

1-93704833-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704833
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704833
    reference: chr 1
allele count: 2
allele frequency: 1.787437886533443e-5
allele num: 111892
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.489-34T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.2958-34T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2604-34T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2601-34T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.443-34T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2762-34T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1629-34T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1869-34T>C
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15395
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2660
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4316
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-93704847-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704847
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704847
    reference: chr 1
allele count: 233
allele frequency: 2.054420089230606e-3
allele num: 113414
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.443-20T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1629-20T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.489-20T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.2958-20T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2762-20T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1869-20T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2604-20T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2601-20T>C
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4740
  bin: 3.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 15567
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 5.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 4.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15784
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 4.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 5.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 6.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 10117
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3317
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4335
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 2
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

1-93704873-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704873
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704873
    reference: chr 1
allele count: 4
allele frequency: 3.380662609871535e-5
allele num: 118320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1635A>G
  hgvsp: ENST00000455267.1:c.1635A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.495A>G
  hgvsp: ENST00000334652.5:c.495A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.2964A>G
  hgvsp: ENST00000557479.1:c.2964A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.449A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2607A>G
  hgvsp: ENST00000343253.7:c.2607A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2768A>G
  hgvsp: ENST00000370276.1:c.2768A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2610A>G
  hgvsp: ENST00000401026.3:c.2610A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1875A>G
  hgvsp: ENST00000338949.4:c.1875A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4791
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10276
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3334
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7454
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val923Val
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

1-93704878-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704878
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704878
    reference: chr 1
allele count: 100
allele frequency: 8.412976174451474e-4
allele num: 118864
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2615T>C
  hgvsp: ENSP00000383808.3:p.Ile872Thr
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2612T>C
  hgvsp: ENSP00000343377.7:p.Ile871Thr
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2773T>C
  hgvsp: ENSP00000359299.1:p.Ile925Thr
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.454T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1640T>C
  hgvsp: ENSP00000391151.1:p.Ile547Thr
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.2969T>C
  hgvsp: ENSP00000451099.1:p.Ile990Thr
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.500T>C
  hgvsp: ENSP00000334084.5:p.Ile167Thr
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1880T>C
  hgvsp: ENSP00000344380.4:p.Ile627Thr
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 9.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10272
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 18726
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 16509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4790
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 4.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27161
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile925Thr
num of homozygotes: 2
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

1-93704879-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704879
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704879
    reference: chr 1
allele count: 1
allele frequency: 8.407600470825626e-6
allele num: 118940
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.501T>G
  hgvsp: ENSP00000334084.5:p.Ile167Met
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.2970T>G
  hgvsp: ENSP00000451099.1:p.Ile990Met
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2613T>G
  hgvsp: ENSP00000343377.7:p.Ile871Met
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1881T>G
  hgvsp: ENSP00000344380.4:p.Ile627Met
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1641T>G
  hgvsp: ENSP00000391151.1:p.Ile547Met
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2774T>G
  hgvsp: ENSP00000359299.1:p.Ile925Met
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2616T>G
  hgvsp: ENSP00000383808.3:p.Ile872Met
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.455T>G
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3335
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile925Met
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP

1-93704895-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704895
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704895
    reference: chr 1
allele count: 5
allele frequency: 4.164237528108603e-5
allele num: 120070
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.517A>G
  hgvsp: ENSP00000334084.5:p.Lys173Glu
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.471A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2790A>G
  hgvsp: ENSP00000359299.1:p.Lys931Glu
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1897A>G
  hgvsp: ENSP00000344380.4:p.Lys633Glu
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1657A>G
  hgvsp: ENSP00000391151.1:p.Lys553Glu
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2629A>G
  hgvsp: ENSP00000343377.7:p.Lys877Glu
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.2986A>G
  hgvsp: ENSP00000451099.1:p.Lys996Glu
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2632A>G
  hgvsp: ENSP00000383808.3:p.Lys878Glu
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19162
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28044
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9598
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7537
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys931Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP

1-93704895-AAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704895
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704892
    reference: chr 1
allele count: 3
allele frequency: 2.498542516865162e-5
allele num: 120070
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.522_524delAGA
  hgvsp: ENSP00000334084.5:p.Glu175del
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2637_2639delAGA
  hgvsp: ENSP00000383808.3:p.Glu880del
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1902_1904delAGA
  hgvsp: ENSP00000344380.4:p.Glu635del
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.476_478delAGA
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.2991_2993delAGA
  hgvsp: ENSP00000451099.1:p.Glu998del
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2795_2797delAGA
  hgvsp: ENSP00000359299.1:p.Glu933del
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1662_1664delAGA
  hgvsp: ENSP00000391151.1:p.Glu555del
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2634_2636delAGA
  hgvsp: ENSP00000343377.7:p.Glu879del
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16878
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19162
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10350
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1540
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4415
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7537
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu933del
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: AAAG
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP

1-93704899-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704899
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704899
    reference: chr 1
allele count: 6
allele frequency: 4.990850108135085e-5
allele num: 120220
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2794A>G
  hgvsp: ENSP00000359299.1:p.Glu932Gly
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.2990A>G
  hgvsp: ENSP00000451099.1:p.Glu997Gly
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.521A>G
  hgvsp: ENSP00000334084.5:p.Glu174Gly
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2636A>G
  hgvsp: ENSP00000383808.3:p.Glu879Gly
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2633A>G
  hgvsp: ENSP00000343377.7:p.Glu878Gly
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1901A>G
  hgvsp: ENSP00000344380.4:p.Glu634Gly
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1661A>G
  hgvsp: ENSP00000391151.1:p.Glu554Gly
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.475A>G
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4790
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2157
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9596
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu932Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

1-93704903-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704903
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704903
    reference: chr 1
allele count: 3
allele frequency: 2.493724127612176e-5
allele num: 120302
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2798G>A
  hgvsp: ENST00000370276.1:c.2798G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1665G>A
  hgvsp: ENST00000455267.1:c.1665G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.2994G>A
  hgvsp: ENST00000557479.1:c.2994G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.525G>A
  hgvsp: ENST00000334652.5:c.525G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2637G>A
  hgvsp: ENST00000343253.7:c.2637G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2640G>A
  hgvsp: ENST00000401026.3:c.2640G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1905G>A
  hgvsp: ENST00000338949.4:c.1905G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.479G>A
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19243
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7547
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3338
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu933Glu
num of homozygotes: 1
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

1-93704909-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704909
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704909
    reference: chr 1
allele count: 1
allele frequency: 8.305233958440609e-6
allele num: 120406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.531T>C
  hgvsp: ENST00000334652.5:c.531T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2643T>C
  hgvsp: ENST00000343253.7:c.2643T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3000T>C
  hgvsp: ENST00000557479.1:c.3000T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2646T>C
  hgvsp: ENST00000401026.3:c.2646T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1671T>C
  hgvsp: ENST00000455267.1:c.1671T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.485T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1911T>C
  hgvsp: ENST00000338949.4:c.1911T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2804T>C
  hgvsp: ENST00000370276.1:c.2804T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17001
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7557
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser935Ser
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

1-93704909-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704909
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704908
    reference: chr 1
allele count: 1
allele frequency: 8.305233958440609e-6
allele num: 120406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3004delA
  hgvsp: ENSP00000451099.1:p.Met1002TrpfsTer5
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2808delA
  hgvsp: ENSP00000359299.1:p.Met937TrpfsTer5
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2647delA
  hgvsp: ENSP00000343377.7:p.Met883TrpfsTer5
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1915delA
  hgvsp: ENSP00000344380.4:p.Met639TrpfsTer5
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1675delA
  hgvsp: ENSP00000391151.1:p.Met559TrpfsTer5
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2650delA
  hgvsp: ENSP00000383808.3:p.Met884TrpfsTer5
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.489delA
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.535delA
  hgvsp: ENSP00000334084.5:p.Met179TrpfsTer5
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19250
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17001
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7557
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3337
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4415
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Met937TrpfsTer5
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: TA
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

1-93704929-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704929
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704929
    reference: chr 1
allele count: 1
allele frequency: 8.295863682367972e-6
allele num: 120542
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3020T>C
  hgvsp: ENSP00000451099.1:p.Met1007Thr
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2824T>C
  hgvsp: ENSP00000359299.1:p.Met942Thr
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2666T>C
  hgvsp: ENSP00000383808.3:p.Met889Thr
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1931T>C
  hgvsp: ENSP00000344380.4:p.Met644Thr
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1691T>C
  hgvsp: ENSP00000391151.1:p.Met564Thr
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.551T>C
  hgvsp: ENSP00000334084.5:p.Met184Thr
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2663T>C
  hgvsp: ENSP00000343377.7:p.Met888Thr
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.505T>C
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1540
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28353
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Met942Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

1-93704940-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704940
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704940
    reference: chr 1
allele count: 1
allele frequency: 8.295588406085643e-6
allele num: 120546
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2835C>T
  hgvsp: ENSP00000359299.1:p.Arg946Ter
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3031C>T
  hgvsp: ENSP00000451099.1:p.Arg1011Ter
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2677C>T
  hgvsp: ENSP00000383808.3:p.Arg893Ter
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.562C>T
  hgvsp: ENSP00000334084.5:p.Arg188Ter
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1702C>T
  hgvsp: ENSP00000391151.1:p.Arg568Ter
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.516C>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2674C>T
  hgvsp: ENSP00000343377.7:p.Arg892Ter
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1942C>T
  hgvsp: ENSP00000344380.4:p.Arg648Ter
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4793
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10384
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3335
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7575
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg946Ter
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum

1-93704941-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704941
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704941
    reference: chr 1
allele count: 36
allele frequency: 2.986362278926237e-4
allele num: 120548
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2836G>A
  hgvsp: ENSP00000359299.1:p.Arg946Gln
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.563G>A
  hgvsp: ENSP00000334084.5:p.Arg188Gln
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2675G>A
  hgvsp: ENSP00000343377.7:p.Arg892Gln
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1703G>A
  hgvsp: ENSP00000391151.1:p.Arg568Gln
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3032G>A
  hgvsp: ENSP00000451099.1:p.Arg1011Gln
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2678G>A
  hgvsp: ENSP00000383808.3:p.Arg893Gln
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1943G>A
  hgvsp: ENSP00000344380.4:p.Arg648Gln
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.517G>A
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2154
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7572
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg946Gln
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

1-93704946-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704946
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704946
    reference: chr 1
allele count: 1
allele frequency: 8.29531314807134e-6
allele num: 120550
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.522G>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2841G>A
  hgvsp: ENSP00000359299.1:p.Gly948Arg
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1708G>A
  hgvsp: ENSP00000391151.1:p.Gly570Arg
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2683G>A
  hgvsp: ENSP00000383808.3:p.Gly895Arg
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2680G>A
  hgvsp: ENSP00000343377.7:p.Gly894Arg
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3037G>A
  hgvsp: ENSP00000451099.1:p.Gly1013Arg
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1948G>A
  hgvsp: ENSP00000344380.4:p.Gly650Arg
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.568G>A
  hgvsp: ENSP00000334084.5:p.Gly190Arg
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19193
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly948Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

1-93704952-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704952
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704952
    reference: chr 1
allele count: 1774
allele frequency: 1.471490900645333e-2
allele num: 120558
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.528A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2847A>G
  hgvsp: ENSP00000359299.1:p.Asn950Asp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3043A>G
  hgvsp: ENSP00000451099.1:p.Asn1015Asp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2689A>G
  hgvsp: ENSP00000383808.3:p.Asn897Asp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.574A>G
  hgvsp: ENSP00000334084.5:p.Asn192Asp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1954A>G
  hgvsp: ENSP00000344380.4:p.Asn652Asp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1714A>G
  hgvsp: ENSP00000391151.1:p.Asn572Asp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2686A>G
  hgvsp: ENSP00000343377.7:p.Asn896Asp
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10091
  bin: 3.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.75e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.75e1
  variant carriers: 127
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 5.25e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 18738
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 16769
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 9.25e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 4.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 3.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 9.75e1
  variant carriers: 521
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 4.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.25e1
  variant carriers: 137
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 137
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 6.25e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 5.75e1
  variant carriers: 88
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3203
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7410
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn950Asp
num of homozygotes: 21
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

1-93704953-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704953
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704953
    reference: chr 1
allele count: 2
allele frequency: 1.659310390601666e-5
allele num: 120532
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2687A>G
  hgvsp: ENSP00000343377.7:p.Asn896Ser
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.575A>G
  hgvsp: ENSP00000334084.5:p.Asn192Ser
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1955A>G
  hgvsp: ENSP00000344380.4:p.Asn652Ser
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2848A>G
  hgvsp: ENSP00000359299.1:p.Asn950Ser
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2690A>G
  hgvsp: ENSP00000383808.3:p.Asn897Ser
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1715A>G
  hgvsp: ENSP00000391151.1:p.Asn572Ser
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.529A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3044A>G
  hgvsp: ENSP00000451099.1:p.Asn1015Ser
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28391
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2158
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn950Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD

1-93704954-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704954
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704953
    reference: chr 1
allele count: 1
allele frequency: 8.296138976920141e-6
allele num: 120538
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2694delA
  hgvsp: ENSP00000383808.3:p.Ala899GlnfsTer7
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1959delA
  hgvsp: ENSP00000344380.4:p.Ala654GlnfsTer7
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2852delA
  hgvsp: ENSP00000359299.1:p.Ala952GlnfsTer7
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.579delA
  hgvsp: ENSP00000334084.5:p.Ala194GlnfsTer7
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1719delA
  hgvsp: ENSP00000391151.1:p.Ala574GlnfsTer7
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.533delA
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3048delA
  hgvsp: ENSP00000451099.1:p.Ala1017GlnfsTer7
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2691delA
  hgvsp: ENSP00000343377.7:p.Ala898GlnfsTer7
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3322
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala952GlnfsTer7
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: TA
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

1-93704961-A-ACTAACT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704961
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704967
    reference: chr 1
allele count: 1
allele frequency: 8.295726041943191e-6
allele num: 120544
alternate allele: ACTAACT
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1963_1964insCTAACT
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2698_2699insCTAACT
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: protein_altering_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2856_2857insCTAACT
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.537_538insCTAACT
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3052_3053insCTAACT
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1723_1724insCTAACT
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.583_584insCTAACT
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: protein_altering_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2695_2696insCTAACT
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: protein altering
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18821
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10459
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28382
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4418
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1517
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Met953delinsThrAsnLeu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD

1-93704966-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704966
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704966
    reference: chr 1
allele count: 1
allele frequency: 8.299581701082266e-6
allele num: 120488
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3057C>T
  hgvsp: ENST00000557479.1:c.3057C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.542C>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2703C>T
  hgvsp: ENST00000401026.3:c.2703C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2700C>T
  hgvsp: ENST00000343253.7:c.2700C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1728C>T
  hgvsp: ENST00000455267.1:c.1728C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.588C>T
  hgvsp: ENST00000334652.5:c.588C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1968C>T
  hgvsp: ENST00000338949.4:c.1968C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2861C>T
  hgvsp: ENST00000370276.1:c.2861C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28319
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9466
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
hgvs: p.His954His
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

1-93704967-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704967
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704967
    reference: chr 1
allele count: 7
allele frequency: 5.812215616593045e-5
allele num: 120436
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.543C>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2862C>T
  hgvsp: ENSP00000359299.1:p.Leu955Phe
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1729C>T
  hgvsp: ENSP00000391151.1:p.Leu577Phe
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2704C>T
  hgvsp: ENSP00000383808.3:p.Leu902Phe
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.589C>T
  hgvsp: ENSP00000334084.5:p.Leu197Phe
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1969C>T
  hgvsp: ENSP00000344380.4:p.Leu657Phe
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2701C>T
  hgvsp: ENSP00000343377.7:p.Leu901Phe
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3058C>T
  hgvsp: ENSP00000451099.1:p.Leu1020Phe
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7591
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4407
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu955Phe
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD

1-93704967-CTCTCTCAAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704967
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704958
    reference: chr 1
allele count: 31
allele frequency: 2.573981201634063e-4
allele num: 120436
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsp: ENSP00000344380.4:p.Ser658_Leu660del
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsp: ENSP00000383808.3:p.Ser903_Leu905del
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsp: ENSP00000391151.1:p.Ser578_Leu580del
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsp: ENSP00000451099.1:p.Ser1021_Leu1023del
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.591_599delCTCTCAATT
  hgvsp: ENSP00000334084.5:p.Ser198_Leu200del
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.545_553delCTCTCAATT
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsp: ENSP00000343377.7:p.Ser902_Leu904del
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsp: ENSP00000359299.1:p.Ser956_Leu958del
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 18747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17257
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4407
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9479
  bin: 9.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 7591
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3157
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser956_Leu958del
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: CTCTCTCAAT
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

1-93704979-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704979
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704979
    reference: chr 1
allele count: 1
allele frequency: 8.309650828472188e-6
allele num: 120342
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2874G>C
  hgvsp: ENSP00000359299.1:p.Asp959His
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3070G>C
  hgvsp: ENSP00000451099.1:p.Asp1024His
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.555G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2713G>C
  hgvsp: ENSP00000343377.7:p.Asp905His
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.601G>C
  hgvsp: ENSP00000334084.5:p.Asp201His
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1981G>C
  hgvsp: ENSP00000344380.4:p.Asp661His
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2716G>C
  hgvsp: ENSP00000383808.3:p.Asp906His
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1741G>C
  hgvsp: ENSP00000391151.1:p.Asp581His
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18640
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28236
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7575
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2155
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp959His
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

1-93704993-TCAGA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704993
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704989
    reference: chr 1
allele count: 1
allele frequency: 8.32251406504877e-6
allele num: 120156
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1758_1761delGACA
  hgvsp: ENSP00000391151.1:p.Thr587ArgfsTer4
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2891_2894delGACA
  hgvsp: ENSP00000359299.1:p.Thr965ArgfsTer4
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2733_2736delGACA
  hgvsp: ENSP00000383808.3:p.Thr912ArgfsTer4
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2730_2733delGACA
  hgvsp: ENSP00000343377.7:p.Thr911ArgfsTer4
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1998_2001delGACA
  hgvsp: ENSP00000344380.4:p.Thr667ArgfsTer4
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3087_3090delGACA
  hgvsp: ENSP00000451099.1:p.Thr1030ArgfsTer4
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.572_575delGACA
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.618_621delGACA
  hgvsp: ENSP00000334084.5:p.Thr207ArgfsTer4
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2552
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2153
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3305
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr965ArgfsTer4
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: TCAGA
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS

1-93704996-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704996
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704996
    reference: chr 1
allele count: 1
allele frequency: 8.335973058135075e-6
allele num: 119962
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1998G>T
  hgvsp: ENSP00000344380.4:p.Gln666His
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2730G>T
  hgvsp: ENSP00000343377.7:p.Gln910His
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2733G>T
  hgvsp: ENSP00000383808.3:p.Gln911His
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1758G>T
  hgvsp: ENSP00000391151.1:p.Gln586His
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2891G>T
  hgvsp: ENSP00000359299.1:p.Gln964His
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.618G>T
  hgvsp: ENSP00000334084.5:p.Gln206His
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3087G>T
  hgvsp: ENSP00000451099.1:p.Gln1029His
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.572G>T
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4854
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18108
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10444
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9451
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4395
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln964His
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

1-93704997-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704997
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704997
    reference: chr 1
allele count: 1
allele frequency: 8.335695113615524e-6
allele num: 119966
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.1999A>T
  hgvsp: ENSP00000344380.4:p.Thr667Ser
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.619A>T
  hgvsp: ENSP00000334084.5:p.Thr207Ser
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2892A>T
  hgvsp: ENSP00000359299.1:p.Thr965Ser
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1759A>T
  hgvsp: ENSP00000391151.1:p.Thr587Ser
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3088A>T
  hgvsp: ENSP00000451099.1:p.Thr1030Ser
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2731A>T
  hgvsp: ENSP00000343377.7:p.Thr911Ser
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2734A>T
  hgvsp: ENSP00000383808.3:p.Thr912Ser
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.573A>T
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10436
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4855
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3299
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4399
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr965Ser
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

1-93704998-CAAAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93704998
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93704994
    reference: chr 1
allele count: 1
allele frequency: 8.337224037884346e-6
allele num: 119944
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3091_3094delAAGA
  hgvsp: ENSP00000451099.1:p.Lys1031GlnfsTer3
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2895_2898delAAGA
  hgvsp: ENSP00000359299.1:p.Lys966GlnfsTer3
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2734_2737delAAGA
  hgvsp: ENSP00000343377.7:p.Lys912GlnfsTer3
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.622_625delAAGA
  hgvsp: ENSP00000334084.5:p.Lys208GlnfsTer3
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000122483
  ensembl transcript: ENST00000421014
  gene symbol: CCDC18
  hgvsc: ENST00000421014.2:n.576_579delAAGA
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1762_1765delAAGA
  hgvsp: ENSP00000391151.1:p.Lys588GlnfsTer3
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2737_2740delAAGA
  hgvsp: ENSP00000383808.3:p.Lys913GlnfsTer3
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2002_2005delAAGA
  hgvsp: ENSP00000344380.4:p.Lys668GlnfsTer3
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10463
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2153
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4392
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys966GlnfsTer3
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: CAAAG
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

1-93705031-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705031
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705031
    reference: chr 1
allele count: 1
allele frequency: 8.468260957929679e-6
allele num: 118088
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1792+1G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2767+1G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2925+1G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3121+1G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.652+1G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2764+1G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2032+1G>C
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15696
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7253
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3267
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24387
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2495
  bin: 2.25e1
  variant carriers: 0
hgvs: c.2925+1G>C
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-93705035-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705035
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705035
    reference: chr 1
allele count: 1
allele frequency: 8.478456242687331e-6
allele num: 117946
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2764+5G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1792+5G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.652+5G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2032+5G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3121+5G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2767+5G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2925+5G>C
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16470
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4823
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9445
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24137
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2648
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4347
  bin: 7.75e1
  variant carriers: 0
hgvs: c.2925+5G>C
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

1-93705049-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705049
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705049
    reference: chr 1
allele count: 1
allele frequency: 8.539272112445135e-6
allele num: 117106
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1792+19G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2032+19G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.652+19G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2767+19G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2764+19G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2925+19G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3121+19G>C
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3250
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22079
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1245
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6939
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4287
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS

1-93705062-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705062
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705062
    reference: chr 1
allele count: 1
allele frequency: 8.597565169543985e-6
allele num: 116312
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.652+32T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2767+32T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2032+32T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2764+32T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3121+32T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1792+32T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2925+32T>C
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4777
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9721
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3702
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12481
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2142
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1638
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1980
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3461
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18829
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

1-93705064-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705064
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705064
    reference: chr 1
allele count: 1
allele frequency: 8.595348197555483e-6
allele num: 116342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2032+34T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1792+34T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3121+34T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2767+34T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2764+34T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.652+34T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2925+34T>C
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9687
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2907
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9423
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6511
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1289
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

1-93705066-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705066
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705066
    reference: chr 1
allele count: 3
allele frequency: 2.584825351967052e-5
allele num: 116062
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2925+36T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.652+36T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1792+36T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2764+36T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2767+36T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3121+36T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2032+36T>A
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4729
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9577
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6305
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9424
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1091
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17555
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2179
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD

1-93705079-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705079
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705079
    reference: chr 1
allele count: 6
allele frequency: 5.221477678182926e-5
allele num: 114910
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.652+49C>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1792+49C>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2925+49C>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2764+49C>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2767+49C>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3121+49C>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2032+49C>T
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4728
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5516
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12461
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9036
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13245
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1498
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2637
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 733
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4155
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1434
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2406
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12693
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2397
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5878
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

1-93705080-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705080
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705080
    reference: chr 1
allele count: 2
allele frequency: 1.743466359816587e-5
allele num: 114714
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2764+50G>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3121+50G>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2767+50G>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2925+50G>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.652+50G>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2032+50G>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1792+50G>A
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5485
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8987
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13254
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12095
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2678
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5777
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4149
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2802
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3063
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD

1-93705189-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705189
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705189
    reference: chr 1
allele count: 1
allele frequency: 8.834858818956073e-6
allele num: 113188
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2926-51T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3122-51T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.653-51T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2768-51T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2033-51T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1793-51T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2765-51T>C
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12232
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6823
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21756
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7194
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2583
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2774
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2463
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1237
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2132
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff

1-93705198-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705198
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705198
    reference: chr 1
allele count: 3
allele frequency: 2.643218382702779e-5
allele num: 113498
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2926-42T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3122-42T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2765-42T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.653-42T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2033-42T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1793-42T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2768-42T>A
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22277
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1369
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37040
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6469
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

1-93705198-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705198
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705198
    reference: chr 1
allele count: 10
allele frequency: 8.810727942342597e-5
allele num: 113498
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3122-42T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2768-42T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.653-42T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2926-42T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2765-42T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1793-42T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2033-42T>C
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22277
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7181
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17241
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37040
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2231
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2923
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

1-93705199-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705199
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705199
    reference: chr 1
allele count: 4
allele frequency: 3.524912317806095e-5
allele num: 113478
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3122-41G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2768-41G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2926-41G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1793-41G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.653-41G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2765-41G>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2033-41G>C
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22375
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4530
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7238
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2938
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1295
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6458
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-93705199-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705199
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705199
    reference: chr 1
allele count: 1
allele frequency: 8.812280794515236e-6
allele num: 113478
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3122-41G>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1793-41G>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2926-41G>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2768-41G>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2765-41G>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.653-41G>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2033-41G>T
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2085
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22375
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2938
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6458
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1647
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

1-93705200-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705200
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705200
    reference: chr 1
allele count: 1
allele frequency: 8.792754770069463e-6
allele num: 113730
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3122-40G>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2033-40G>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2765-40G>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2926-40G>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.653-40G>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2768-40G>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1793-40G>A
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2954
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6523
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38363
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

1-93705200-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705200
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705200
    reference: chr 1
allele count: 2
allele frequency: 1.758550954013893e-5
allele num: 113730
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2765-40G>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2926-40G>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2768-40G>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3122-40G>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2033-40G>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.653-40G>T
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1793-40G>T
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22492
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2954
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1973
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6523
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

1-93705209-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705209
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705209
    reference: chr 1
allele count: 4
allele frequency: 3.450298450815996e-5
allele num: 115932
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2768-31T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2765-31T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.653-31T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2926-31T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1793-31T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2033-31T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3122-31T>A
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23113
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7297
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43112
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: DP

1-93705214-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705214
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705214
    reference: chr 1
allele count: 9
allele frequency: 7.666098807495741e-5
allele num: 117400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2768-26A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1793-26A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2033-26A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3122-26A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2765-26A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.653-26A>G
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2926-26A>G
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1581
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44649
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6830
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

1-93705215-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705215
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705215
    reference: chr 1
allele count: 1
allele frequency: 8.501666326600013e-6
allele num: 117624
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.653-25T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3122-25T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2768-25T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1793-25T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2033-25T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2926-25T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2765-25T>C
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1326
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1450
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: T
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

1-93705223-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705223
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705223
    reference: chr 1
allele count: 1
allele frequency: 8.40463263350759e-6
allele num: 118982
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1793-17T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2765-17T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3122-17T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.653-17T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2768-17T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2033-17T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2926-17T>C
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23691
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1635
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

1-93705224-TCTCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705224
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705219
    reference: chr 1
allele count: 2
allele frequency: 1.67993817827504e-5
allele num: 119052
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3122-11_3122-7delCCTCT
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2768-11_2768-7delCCTCT
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2765-11_2765-7delCCTCT
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2926-11_2926-7delCCTCT
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1793-11_1793-7delCCTCT
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2033-11_2033-7delCCTCT
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.653-11_653-7delCCTCT
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6914
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: TCTCTC
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/1-93705225-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705225
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705225
    reference: chr 1
allele count: 2
allele frequency: 1.679148335963999e-5
allele num: 119108
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2765-15C>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1793-15C>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.653-15C>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2768-15C>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3122-15C>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2926-15C>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2033-15C>A
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7407
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46319
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

1-93705237-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705237
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705237
    reference: chr 1
allele count: 9
allele frequency: 7.508133811629265e-5
allele num: 119870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1793-3T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2033-3T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2926-3T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2768-3T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2765-3T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.653-3T>A
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3122-3T>A
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25307
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
hgvs: c.2926-3T>A
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

1-93705237-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705237
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705237
    reference: chr 1
allele count: 1
allele frequency: 8.342370901810295e-6
allele num: 119870
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2765-3T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2768-3T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.653-3T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1793-3T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3122-3T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2033-3T>C
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2926-3T>C
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25307
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46982
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
hgvs: c.2926-3T>C
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

1-93705245-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705245
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705245
    reference: chr 1
allele count: 6
allele frequency: 4.993508439029262e-5
allele num: 120156
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2931G>A
  hgvsp: ENSP00000359299.1:p.Glu978Lys
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.658G>A
  hgvsp: ENSP00000334084.5:p.Glu220Lys
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2770G>A
  hgvsp: ENSP00000343377.7:p.Glu924Lys
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2773G>A
  hgvsp: ENSP00000383808.3:p.Glu925Lys
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1798G>A
  hgvsp: ENSP00000391151.1:p.Glu600Lys
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3127G>A
  hgvsp: ENSP00000451099.1:p.Glu1043Lys
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2038G>A
  hgvsp: ENSP00000344380.4:p.Glu680Lys
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23991
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7005
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu978Lys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

1-93705270-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705270
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705270
    reference: chr 1
allele count: 2
allele frequency: 1.660109235187675e-5
allele num: 120474
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1823C>T
  hgvsp: ENSP00000391151.1:p.Thr608Ile
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2798C>T
  hgvsp: ENSP00000383808.3:p.Thr933Ile
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.683C>T
  hgvsp: ENSP00000334084.5:p.Thr228Ile
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3152C>T
  hgvsp: ENSP00000451099.1:p.Thr1051Ile
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2956C>T
  hgvsp: ENSP00000359299.1:p.Thr986Ile
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2795C>T
  hgvsp: ENSP00000343377.7:p.Thr932Ile
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2063C>T
  hgvsp: ENSP00000344380.4:p.Thr688Ile
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25582
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1625
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7015
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr986Ile
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

1-93705291-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705291
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705291
    reference: chr 1
allele count: 3
allele frequency: 2.488717812582957e-5
allele num: 120544
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2084C>T
  hgvsp: ENSP00000344380.4:p.Ala695Val
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2816C>T
  hgvsp: ENSP00000343377.7:p.Ala939Val
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1844C>T
  hgvsp: ENSP00000391151.1:p.Ala615Val
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2977C>T
  hgvsp: ENSP00000359299.1:p.Ala993Val
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2819C>T
  hgvsp: ENSP00000383808.3:p.Ala940Val
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3173C>T
  hgvsp: ENSP00000451099.1:p.Ala1058Val
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.704C>T
  hgvsp: ENSP00000334084.5:p.Ala235Val
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7451
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7012
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1624
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala993Val
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

1-93705301-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705301
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705301
    reference: chr 1
allele count: 1
allele frequency: 8.29462508294625e-6
allele num: 120560
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2987A>G
  hgvsp: ENST00000370276.1:c.2987A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1854A>G
  hgvsp: ENST00000455267.1:c.1854A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3183A>G
  hgvsp: ENST00000557479.1:c.3183A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.710A>G
  hgvsp: ENSP00000334084.5:p.Asn237Ser
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2829A>G
  hgvsp: ENST00000401026.3:c.2829A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2826A>G
  hgvsp: ENST00000343253.7:c.2826A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2094A>G
  hgvsp: ENST00000338949.4:c.2094A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25609
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7013
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1622
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn237Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

1-93705302-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705302
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705302
    reference: chr 1
allele count: 4
allele frequency: 3.317905074735812e-5
allele num: 120558
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2988C>T
  hgvsp: ENSP00000359299.1:p.Arg997Trp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1855C>T
  hgvsp: ENSP00000391151.1:p.Arg619Trp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.711C>T
  hgvsp: ENST00000334652.5:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3184C>T
  hgvsp: ENSP00000451099.1:p.Arg1062Trp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2830C>T
  hgvsp: ENSP00000383808.3:p.Arg944Trp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2827C>T
  hgvsp: ENSP00000343377.7:p.Arg943Trp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2095C>T
  hgvsp: ENSP00000344380.4:p.Arg699Trp
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24032
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47427
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg997Trp
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

1-93705303-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705303
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705303
    reference: chr 1
allele count: 2
allele frequency: 1.658952537367906e-5
allele num: 120558
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.712G>A
  hgvsp: ENSP00000334084.5:p.Gly238Arg
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3185G>A
  hgvsp: ENSP00000451099.1:p.Arg1062Gln
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2831G>A
  hgvsp: ENSP00000383808.3:p.Arg944Gln
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2989G>A
  hgvsp: ENSP00000359299.1:p.Arg997Gln
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2828G>A
  hgvsp: ENSP00000343377.7:p.Arg943Gln
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2096G>A
  hgvsp: ENSP00000344380.4:p.Arg699Gln
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1856G>A
  hgvsp: ENSP00000391151.1:p.Arg619Gln
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1619
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg997Gln
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

1-93705304-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705304
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705304
    reference: chr 1
allele count: 6
allele frequency: 4.976857612103718e-5
allele num: 120558
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2829G>C
  hgvsp: ENST00000343253.7:c.2829G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.713G>C
  hgvsp: ENSP00000334084.5:p.Gly238Ala
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.2990G>C
  hgvsp: ENST00000370276.1:c.2990G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2097G>C
  hgvsp: ENST00000338949.4:c.2097G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2832G>C
  hgvsp: ENST00000401026.3:c.2832G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1857G>C
  hgvsp: ENST00000455267.1:c.1857G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3186G>C
  hgvsp: ENST00000557479.1:c.3186G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1622
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47403
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly238Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

1-93705325-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705325
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705325
    reference: chr 1
allele count: 6
allele frequency: 4.977022744993944e-5
allele num: 120554
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2850A>G
  hgvsp: ENST00000343253.7:c.2850A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.730A>G
  hgvsp: ENSP00000334084.5:p.Thr244Ala
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3207A>G
  hgvsp: ENST00000557479.1:c.3207A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1878A>G
  hgvsp: ENST00000455267.1:c.1878A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.3011A>G
  hgvsp: ENST00000370276.1:c.3011A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2118A>G
  hgvsp: ENST00000338949.4:c.2118A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2853A>G
  hgvsp: ENST00000401026.3:c.2853A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24039
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47427
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr244Ala
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

1-93705333-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705333
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705333
    reference: chr 1
allele count: 1
allele frequency: 8.295726041943191e-6
allele num: 120544
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2861C>T
  hgvsp: ENSP00000383808.3:p.Ala954Val
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2858C>T
  hgvsp: ENSP00000343377.7:p.Ala953Val
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2126C>T
  hgvsp: ENSP00000344380.4:p.Ala709Val
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3215C>T
  hgvsp: ENSP00000451099.1:p.Ala1072Val
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1886C>T
  hgvsp: ENSP00000391151.1:p.Ala629Val
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.3019C>T
  hgvsp: ENSP00000359299.1:p.Ala1007Val
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.738C>T
  hgvsp: ENST00000334652.5:c.738C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25578
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24048
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7013
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala1007Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-93705338-GGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705338
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705336
    reference: chr 1
allele count: 1
allele frequency: 8.296276631047985e-6
allele num: 120536
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.746_747delGA
  hgvsp: ENSP00000334084.5:p.Arg249AsnfsTer2
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2869_2870delGA
  hgvsp: ENSP00000383808.3:p.Glu957IlefsTer35
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3223_3224delGA
  hgvsp: ENSP00000451099.1:p.Glu1075IlefsTer35
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2866_2867delGA
  hgvsp: ENSP00000343377.7:p.Glu956IlefsTer35
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.3027_3028delGA
  hgvsp: ENSP00000359299.1:p.Glu1010IlefsTer35
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1894_1895delGA
  hgvsp: ENSP00000391151.1:p.Glu632IlefsTer35
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2134_2135delGA
  hgvsp: ENSP00000344380.4:p.Glu712IlefsTer35
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7005
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47394
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu1010IlefsTer35
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: GGA
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

1-93705340-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705340
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705340
    reference: chr 1
allele count: 1
allele frequency: 8.29655195300833e-6
allele num: 120532
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2865A>G
  hgvsp: ENST00000343253.7:c.2865A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1893A>G
  hgvsp: ENST00000455267.1:c.1893A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2868A>G
  hgvsp: ENST00000401026.3:c.2868A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2133A>G
  hgvsp: ENST00000338949.4:c.2133A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3222A>G
  hgvsp: ENST00000557479.1:c.3222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.745A>G
  hgvsp: ENSP00000334084.5:p.Arg249Gly
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.3026A>G
  hgvsp: ENST00000370276.1:c.3026A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7009
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg249Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

1-93705343-A-ATT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705343
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705345
    reference: chr 1
allele count: 3
allele frequency: 2.488841693076042e-5
allele num: 120538
alternate allele: ATT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3226_3227dupTT
  hgvsp: ENSP00000451099.1:p.Leu1076PhefsTer2
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2137_2138dupTT
  hgvsp: ENSP00000344380.4:p.Leu713PhefsTer2
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2872_2873dupTT
  hgvsp: ENSP00000383808.3:p.Leu958PhefsTer2
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.749_750dupTT
  hgvsp: ENSP00000334084.5:p.Lys251LeufsTer343
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.3030_3031dupTT
  hgvsp: ENSP00000359299.1:p.Leu1011PhefsTer2
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2869_2870dupTT
  hgvsp: ENSP00000343377.7:p.Leu957PhefsTer2
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1897_1898dupTT
  hgvsp: ENSP00000391151.1:p.Leu633PhefsTer2
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7456
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25577
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7012
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu1011PhefsTer2
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

1-93705346-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705346
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705346
    reference: chr 1
allele count: 1
allele frequency: 8.296276631047985e-6
allele num: 120536
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2139A>G
  hgvsp: ENST00000338949.4:c.2139A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1899A>G
  hgvsp: ENST00000455267.1:c.1899A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.751A>G
  hgvsp: ENSP00000334084.5:p.Lys251Glu
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3228A>G
  hgvsp: ENST00000557479.1:c.3228A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.3032A>G
  hgvsp: ENST00000370276.1:c.3032A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2874A>G
  hgvsp: ENST00000401026.3:c.2874A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2871A>G
  hgvsp: ENST00000343253.7:c.2871A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24052
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7011
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys251Glu
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum

1-93705375-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705375
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705375
    reference: chr 1
allele count: 1
allele frequency: 8.299306178003518e-6
allele num: 120492
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2903T>G
  hgvsp: ENSP00000383808.3:p.Leu968Trp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3257T>G
  hgvsp: ENSP00000451099.1:p.Leu1086Trp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1928T>G
  hgvsp: ENSP00000391151.1:p.Leu643Trp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2900T>G
  hgvsp: ENSP00000343377.7:p.Leu967Trp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2168T>G
  hgvsp: ENSP00000344380.4:p.Leu723Trp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.3061T>G
  hgvsp: ENSP00000359299.1:p.Leu1021Trp
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.780T>G
  hgvsp: ENSP00000334084.5:p.Ile260Met
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24090
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7013
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu1021Trp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-93705392-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705392
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705392
    reference: chr 1
allele count: 1
allele frequency: 8.303440945927993e-6
allele num: 120432
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2920A>G
  hgvsp: ENSP00000383808.3:p.Lys974Glu
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.3078A>G
  hgvsp: ENSP00000359299.1:p.Lys1027Glu
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2917A>G
  hgvsp: ENSP00000343377.7:p.Lys973Glu
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2185A>G
  hgvsp: ENSP00000344380.4:p.Lys729Glu
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1945A>G
  hgvsp: ENSP00000391151.1:p.Lys649Glu
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.797A>G
  hgvsp: ENSP00000334084.5:p.Glu266Gly
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3274A>G
  hgvsp: ENSP00000451099.1:p.Lys1092Glu
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24102
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7458
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1338
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1612
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys1027Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

1-93705401-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705401
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705401
    reference: chr 1
allele count: 11
allele frequency: 9.140008309098463e-5
allele num: 120350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2194T>C
  hgvsp: ENST00000338949.4:c.2194T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3283T>C
  hgvsp: ENST00000557479.1:c.3283T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1954T>C
  hgvsp: ENST00000455267.1:c.1954T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.3087T>C
  hgvsp: ENST00000370276.1:c.3087T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2926T>C
  hgvsp: ENST00000343253.7:c.2926T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2929T>C
  hgvsp: ENST00000401026.3:c.2929T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.806T>C
  hgvsp: ENSP00000334084.5:p.Ile269Thr
  variant of: http://identifiers.org/hgnc/30370
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25486
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24095
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1618
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7009
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile269Thr
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

1-93705406-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705406
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705406
    reference: chr 1
allele count: 6
allele frequency: 4.987862867023576e-5
allele num: 120292
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.811A>G
  hgvsp: ENSP00000334084.5:p.Ile271Val
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2931A>G
  hgvsp: ENST00000343253.7:c.2931A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.3092A>G
  hgvsp: ENST00000370276.1:c.3092A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2199A>G
  hgvsp: ENST00000338949.4:c.2199A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2934A>G
  hgvsp: ENST00000401026.3:c.2934A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3288A>G
  hgvsp: ENST00000557479.1:c.3288A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1959A>G
  hgvsp: ENST00000455267.1:c.1959A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30370
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25466
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24094
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47339
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1344
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile271Val
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

1-93705408-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705408
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705408
    reference: chr 1
allele count: 1
allele frequency: 8.313519445321983e-6
allele num: 120286
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1961T>G
  hgvsp: ENSP00000391151.1:p.Leu654Ter
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2936T>G
  hgvsp: ENSP00000383808.3:p.Leu979Ter
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2933T>G
  hgvsp: ENSP00000343377.7:p.Leu978Ter
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.813T>G
  hgvsp: ENSP00000334084.5:p.Ile271Met
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3290T>G
  hgvsp: ENSP00000451099.1:p.Leu1097Ter
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2201T>G
  hgvsp: ENSP00000344380.4:p.Leu734Ter
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.3094T>G
  hgvsp: ENSP00000359299.1:p.Leu1032Ter
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7453
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1331
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7007
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu1032Ter
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

1-93705410-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705410
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705410
    reference: chr 1
allele count: 3
allele frequency: 2.494346148729547e-5
allele num: 120272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2203G>A
  hgvsp: ENSP00000344380.4:p.Glu735Lys
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2935G>A
  hgvsp: ENSP00000343377.7:p.Glu979Lys
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3292G>A
  hgvsp: ENSP00000451099.1:p.Glu1098Lys
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.815G>A
  hgvsp: ENSP00000334084.5:p.Arg272Lys
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2938G>A
  hgvsp: ENSP00000383808.3:p.Glu980Lys
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.3096G>A
  hgvsp: ENSP00000359299.1:p.Glu1033Lys
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1963G>A
  hgvsp: ENSP00000391151.1:p.Glu655Lys
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7454
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24096
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu1033Lys
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS

1-93705414-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93705414
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 93705415
    reference: chr 1
allele count: 2
allele frequency: 1.664281196951037e-5
allele num: 120172
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000391151
  ensembl transcript: ENST00000455267
  gene symbol: CCDC18
  hgvsc: ENST00000455267.1:c.1967_1968insG
  hgvsp: ENSP00000391151.1:p.Tyr658IlefsTer10
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000383808
  ensembl transcript: ENST00000401026
  gene symbol: CCDC18
  hgvsc: ENST00000401026.3:c.2942_2943insG
  hgvsp: ENSP00000383808.3:p.Tyr983IlefsTer10
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000344380
  ensembl transcript: ENST00000338949
  gene symbol: CCDC18
  hgvsc: ENST00000338949.4:c.2207_2208insG
  hgvsp: ENSP00000344380.4:p.Tyr738IlefsTer10
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000343377
  ensembl transcript: ENST00000343253
  gene symbol: CCDC18
  hgvsc: ENST00000343253.7:c.2939_2940insG
  hgvsp: ENSP00000343377.7:p.Tyr982IlefsTer10
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000451099
  ensembl transcript: ENST00000557479
  gene symbol: CCDC18
  hgvsc: ENST00000557479.1:c.3296_3297insG
  hgvsp: ENSP00000451099.1:p.Tyr1101IlefsTer10
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000334084
  ensembl transcript: ENST00000334652
  gene symbol: CCDC18
  hgvsc: ENST00000334652.5:c.819_820insG
  hgvsp: ENSP00000334084.5:p.Lys274GlufsTer6
  variant of: http://identifiers.org/hgnc/30370
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000122483
  ensembl protein: ENSP00000359299
  ensembl transcript: ENST00000370276
  gene symbol: CCDC18
  hgvsc: ENST00000370276.1:c.3100_3101insG
  hgvsp: ENSP00000359299.1:p.Tyr1036IlefsTer10
  variant of: http://identifiers.org/hgnc/30370
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25358
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24102
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6991
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Tyr1036IlefsTer10
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP

1-93705414-A-AGAG
type: Variant
location: Region
allele count: 0
allele frequency: 0.0e0
allele num: 120172
alternate allele: AGAG
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.50to99.90
hgvs: p.Glu1034_Lys1035insArg
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 179
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1283
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2165
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33914
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1540
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2230
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1239
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.558023640949285e-5
allele num: 65818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.595435958316844e-5
allele num: 15162
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9666
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.6e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.755e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

DP
type: SiteQuality
SIO_000300: 1.48839e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.02e-1

GenotypeQuality
all individuals: 142
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21197
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7071
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3466
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3295
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9595
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 810
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2145
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3021
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11192
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.042752867570386e-4
allele num: 9590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.560987793075458e-5
allele num: 64062
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.839816e6

QD
type: SiteQuality
SIO_000300: 1.782e1

MQ
type: SiteQuality
SIO_000300: 5.946e1

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

FS
type: SiteQuality
SIO_000300: 1.009e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

VQSLOD
type: SiteQuality
SIO_000300: 6.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.879e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.01e0

GenotypeQuality
all individuals: 69
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2133
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7196
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3286
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3049
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 23448
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9788
bin: 9.75e1
variant carriers: 231

South Asian
type: Population
allele count: 13
allele frequency: 1.104127739086122e-3
allele num: 11774
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 7.262917617763021e-4
allele num: 9638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.726542217826678e-5
allele num: 64712
num of homozygotes: 0

Latino
type: Population
allele count: 207
allele frequency: 1.818022132443351e-2
allele num: 11386
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.180080245456691e-4
allele num: 8474
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.563e1

VQSLOD
type: SiteQuality
SIO_000300: 5.22e0

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

DP
type: SiteQuality
SIO_000300: 1.875554e6

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4395
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3106
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1547
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2160
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26856
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9608
bin: 9.75e1
variant carriers: 4

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9760
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66072
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.646840148698885e-4
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.231e1

MQ
type: SiteQuality
SIO_000300: 5.975e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.08e0

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.45e-1

DP
type: SiteQuality
SIO_000300: 1.922832e6

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4397
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7471
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3111
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9659
bin: 9.75e1
variant carriers: 98

GenotypeQuality
all individuals: 3332
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1541
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2153
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.207875347264162e-4
allele num: 66232
num of homozygotes: 0

African
type: Population
allele count: 85
allele frequency: 8.696541845713116e-3
allele num: 9774
num of homozygotes: 2

Latino
type: Population
allele count: 4
allele frequency: 3.476447071093343e-4
allele num: 11506
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.272727272727273e-3
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513317191283293e-4
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15256
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.49e0

FS
type: SiteQuality
SIO_000300: 1.216e0

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.41e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.17e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

DP
type: SiteQuality
SIO_000300: 1.933735e6

QD
type: SiteQuality
SIO_000300: 1.378e1

GenotypeQuality
all individuals: 129
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9593
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2155
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27290
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3121
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4395
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7477
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509661835748792e-5
allele num: 66240
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.99e-1

FS
type: SiteQuality
SIO_000300: 3.797e0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.24e0

QD
type: SiteQuality
SIO_000300: 1.05e1

DP
type: SiteQuality
SIO_000300: 1.929187e6

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4415
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2156
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3340
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3139
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1540
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.519023128515143e-5
allele num: 66498
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.71e-1

MQ
type: SiteQuality
SIO_000300: 5.909e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.311e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.66e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.84e0

FS
type: SiteQuality
SIO_000300: 5.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

DP
type: SiteQuality
SIO_000300: 1.941799e6

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2156
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9598
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3139
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28044
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3340
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16124
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.59920291110726e-4
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.909e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

FS
type: SiteQuality
SIO_000300: 5.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.84e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.66e-1

QD
type: SiteQuality
SIO_000300: 1.311e1

DP
type: SiteQuality
SIO_000300: 1.941799e6

GenotypeQuality
all individuals: 39
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4416
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3336
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7542
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28155
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3138
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1541
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66534
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.107252298263534e-4
allele num: 9790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16236
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.275e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

DP
type: SiteQuality
SIO_000300: 1.943349e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

FS
type: SiteQuality
SIO_000300: 1.122e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.6e-2

GenotypeQuality
all individuals: 28201
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2158
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4413
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9593
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1542
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3138
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.659508139937652e-5
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004897983713453e-5
allele num: 66558
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16282
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.22e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.917e0

DP
type: SiteQuality
SIO_000300: 1.943902e6

VQSLOD
type: SiteQuality
SIO_000300: 8.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.92e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

QD
type: SiteQuality
SIO_000300: 2.037e1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4415
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3337
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9593
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2157
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28296
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1542
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3144
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502133028901039e-5
allele num: 66572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

DP
type: SiteQuality
SIO_000300: 1.945303e6

FS
type: SiteQuality
SIO_000300: 1.591e0

MQRankSum
type: SiteQuality
SIO_000300: 1.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

QD
type: SiteQuality
SIO_000300: 1.068e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

VQSLOD
type: SiteQuality
SIO_000300: 2.65e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e-1

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3144
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9593
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1542
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28296
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2157
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502133028901039e-5
allele num: 66572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.57e0

VQSLOD
type: SiteQuality
SIO_000300: 2.65e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.46e-1

QD
type: SiteQuality
SIO_000300: 1.068e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

FS
type: SiteQuality
SIO_000300: 1.591e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

DP
type: SiteQuality
SIO_000300: 1.945303e6

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2156
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3148
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3334
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7578
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9592
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4414
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.946728e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.068e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 1.34e1

VQSLOD
type: SiteQuality
SIO_000300: -9.039999999999999e-2

FS
type: SiteQuality
SIO_000300: 2.752e0

MQRankSum
type: SiteQuality
SIO_000300: -2.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28328
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3149
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4413
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9591
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1541
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2156
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.021450459652707e-4
allele num: 9790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 1.51e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

VQSLOD
type: SiteQuality
SIO_000300: 6.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.947042e6

QD
type: SiteQuality
SIO_000300: 1.071e1

MQRankSum
type: SiteQuality
SIO_000300: -7.75e-1

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3145
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9612
bin: 9.75e1
variant carriers: 36

GenotypeQuality
all individuals: 25
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1539
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4409
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28318
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3335
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 34
allele frequency: 5.101887698448426e-4
allele num: 66642
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.39e0

MQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 1.119e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.9e-1

DP
type: SiteQuality
SIO_000300: 1.94899e6

QD
type: SiteQuality
SIO_000300: 1.327e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-1

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1545
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9588
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 113
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7579
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28304
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3150
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3336
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4413
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2156
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500375093773443e-5
allele num: 66650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.74e0

DP
type: SiteQuality
SIO_000300: 1.947088e6

QD
type: SiteQuality
SIO_000300: 1.031e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e-1

FS
type: SiteQuality
SIO_000300: 1.8456e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.03e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.244e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3070
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10767
bin: 9.75e1
variant carriers: 1749

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27825
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4269
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1464
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2053
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 50
allele frequency: 4.333506673600277e-3
allele num: 11538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 179
allele frequency: 2.708837772397095e-2
allele num: 6608
num of homozygotes: 2

African
type: Population
allele count: 38
allele frequency: 3.881511746680286e-3
allele num: 9790
num of homozygotes: 0

Other
type: Population
allele count: 14
allele frequency: 1.5625e-2
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 61
allele frequency: 3.70685464268352e-3
allele num: 16456
num of homozygotes: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1432
allele frequency: 2.148537134283571e-2
allele num: 66650
num of homozygotes: 17

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.19e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.22e0

DP
type: SiteQuality
SIO_000300: 2.03672e6

MQRankSum
type: SiteQuality
SIO_000300: 1.81e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 6.59e0

QD
type: SiteQuality
SIO_000300: 1.575e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3322
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4412
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9464
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3175
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7608
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.734003814808393e-4
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.444e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.125e0

DP
type: SiteQuality
SIO_000300: 1.948119e6

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

FS
type: SiteQuality
SIO_000300: 3.195e0

MQ
type: SiteQuality
SIO_000300: 3.996e1

VQSLOD
type: SiteQuality
SIO_000300: -3.414e0

GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7607
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4414
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3177
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1515
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28380
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2158
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9463
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.079766536964981e-5
allele num: 16448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.068e0

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

MQRankSum
type: SiteQuality
SIO_000300: 6.47e-1

QD
type: SiteQuality
SIO_000300: 1.543e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.684e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 1.948113e6

MQ
type: SiteQuality
SIO_000300: 6.033e1

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2155
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3322
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9464
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3177
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 7609
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.671522719389525e-5
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.371e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.34e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.203e0

MQ
type: SiteQuality
SIO_000300: 4.403e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 1.948111e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.64e-1

FS
type: SiteQuality
SIO_000300: 1.854e1

QD
type: SiteQuality
SIO_000300: 1.0e0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7601
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4412
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3167
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3320
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2161
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1517
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.385e0

VQSLOD
type: SiteQuality
SIO_000300: -1.841e0

MQ
type: SiteQuality
SIO_000300: 5.892e1

FS
type: SiteQuality
SIO_000300: 7.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.66e0

QD
type: SiteQuality
SIO_000300: 1.062e1

DP
type: SiteQuality
SIO_000300: 1.948701e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.428e0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3157
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28299
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2154
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3313
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9479
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.026634382566586e-4
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.507282063601693e-5
allele num: 66602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e-1

FS
type: SiteQuality
SIO_000300: 1.127e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.68e-1

DP
type: SiteQuality
SIO_000300: 1.950489e6

MQ
type: SiteQuality
SIO_000300: 5.147e1

QD
type: SiteQuality
SIO_000300: 6.57e0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2154
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28299
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3313
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.683570684265369e-5
allele num: 11516
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.084205402774397e-5
allele num: 16436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 29
allele frequency: 4.354223596888982e-4
allele num: 66602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

MQ
type: SiteQuality
SIO_000300: 5.147e1

FS
type: SiteQuality
SIO_000300: 1.127e0

DP
type: SiteQuality
SIO_000300: 1.950489e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: -5.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.68e-1

QD
type: SiteQuality
SIO_000300: 6.57e0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4413
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3151
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1515
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3304
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9453
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.021867974657674e-4
allele num: 9786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.279e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.2e-1

FS
type: SiteQuality
SIO_000300: 6.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.168e0

DP
type: SiteQuality
SIO_000300: 1.946639e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

QD
type: SiteQuality
SIO_000300: 1.289e1

GenotypeQuality
all individuals: 78
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27955
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3145
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7587
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4402
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9452
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163602513381429e-4
allele num: 8594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.521e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

MQ
type: SiteQuality
SIO_000300: 5.542e1

MQRankSum
type: SiteQuality
SIO_000300: -1.521e0

VQSLOD
type: SiteQuality
SIO_000300: 2.9e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.179999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.942803e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.634e1

FS
type: SiteQuality
SIO_000300: 1.092e0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2153
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27592
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3298
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7525
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1518
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3141
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.202704379109291e-5
allele num: 16122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.088e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.037e0

DP
type: SiteQuality
SIO_000300: 1.940339e6

QD
type: SiteQuality
SIO_000300: 1.049e1

MQRankSum
type: SiteQuality
SIO_000300: 1.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.956e1

VQSLOD
type: SiteQuality
SIO_000300: -3.615e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.73e0

GenotypeQuality
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9450
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 117
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7529
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27648
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2153
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3138
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1516
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16116
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504709741490866e-5
allele num: 66458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e0

QD
type: SiteQuality
SIO_000300: 1.048e1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.940254e6

MQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.041e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.464e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27632
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7516
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3132
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3297
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9450
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66450
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.210408644888833e-5
allele num: 16102
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.940731e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.48e0

MQ
type: SiteQuality
SIO_000300: 5.873e1

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.376e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.185e0

GenotypeQuality
all individuals: 2151
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4352
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3077
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9446
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 208
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65882
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.694336591243807e-5
allele num: 14938
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9750
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.022e1

MQRankSum
type: SiteQuality
SIO_000300: -8.59e-1

DP
type: SiteQuality
SIO_000300: 1.900314e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.524e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7232
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3266
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2152
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3067
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519018106695832e-5
allele num: 65832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9748
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.029e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.870000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.13e-1

DP
type: SiteQuality
SIO_000300: 1.895411e6

QD
type: SiteQuality
SIO_000300: 1.329e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.45e-1

MQ
type: SiteQuality
SIO_000300: 5.905e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.09e-1

GenotypeQuality
all individuals: 3261
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9439
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 276
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 960
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2995
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1505
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.029442042413012e-4
allele num: 9714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.72e-1

QD
type: SiteQuality
SIO_000300: 9.99e0

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.868439e6

VQSLOD
type: SiteQuality
SIO_000300: 7.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

FS
type: SiteQuality
SIO_000300: 4.999e0

GenotypeQuality
all individuals: 2907
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1279
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6513
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1504
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4201
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3221
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9424
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 673
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.169486664754803e-5
allele num: 13948
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.59e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.22e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.68e0

MQRankSum
type: SiteQuality
SIO_000300: 3.78e-1

DP
type: SiteQuality
SIO_000300: 1.835389e6

GenotypeQuality
all individuals: 1617
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3523
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2144
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3221
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1976
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4195
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1504
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19345
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.177024482109228e-4
allele num: 8496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13958
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65298
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.834689e6

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.185e0

MQ
type: SiteQuality
SIO_000300: 5.899e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

VQSLOD
type: SiteQuality
SIO_000300: -1.977e-1

QD
type: SiteQuality
SIO_000300: 1.113e1

GenotypeQuality
all individuals: 70
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1501
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4174
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3345
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2144
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2875
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.244277021153289e-5
allele num: 13804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.067484662576687e-5
allele num: 65200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.8e-1

DP
type: SiteQuality
SIO_000300: 1.823923e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.194000000000001e0

QD
type: SiteQuality
SIO_000300: 1.068e1

GenotypeQuality
all individuals: 2894
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3007
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9424
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2832
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3197
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2139
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13222
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.921364282330649e-4
allele num: 8444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544163063619518e-5
allele num: 64760
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.803568e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.02e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

FS
type: SiteQuality
SIO_000300: 6.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.435e1

GenotypeQuality
all individuals: 2141
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9428
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1440
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 715
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1554
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3206
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2840
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2388
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2712
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.578053955744165e-5
allele num: 13196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546742560168286e-5
allele num: 64652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.957e0

FS
type: SiteQuality
SIO_000300: 2.103e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

DP
type: SiteQuality
SIO_000300: 1.803171e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.720000000000001e0

GenotypeQuality
all individuals: 2739
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1332
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29724
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1660
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1496
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1388
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6368
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8002
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.607096940087426e-5
allele num: 62224
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.689e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.439e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.99e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.51e0

DP
type: SiteQuality
SIO_000300: 1.469525e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

GenotypeQuality
all individuals: 944
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2923
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2231
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1656
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1307
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8910
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15540
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.743448964312453e-4
allele num: 8014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.42e-1

FS
type: SiteQuality
SIO_000300: 3.847e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.24e-2

DP
type: SiteQuality
SIO_000300: 1.502644e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e0

QD
type: SiteQuality
SIO_000300: 1.665e1

GenotypeQuality
all individuals: 6469
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1369
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1930
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1656
bin: 9.75e1
variant carriers: 10

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.281435207432324e-4
allele num: 62430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8910
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.287001287001287e-4
allele num: 15540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.24e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e0

FS
type: SiteQuality
SIO_000300: 3.847e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e-1

QD
type: SiteQuality
SIO_000300: 1.665e1

DP
type: SiteQuality
SIO_000300: 1.502644e6

GenotypeQuality
all individuals: 37643
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2124
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1256
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1647
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1765
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.92975685063682e-4
allele num: 15546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.602615468444501e-5
allele num: 62398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8024
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.364e0

VQSLOD
type: SiteQuality
SIO_000300: 7.76e-1

FS
type: SiteQuality
SIO_000300: 3.783e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

DP
type: SiteQuality
SIO_000300: 1.508977e6

QD
type: SiteQuality
SIO_000300: 1.29e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.27e-1

GenotypeQuality
all individuals: 2124
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1295
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1765
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37643
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8024
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.432522835456066e-5
allele num: 15546
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.508977e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.364e0

VQSLOD
type: SiteQuality
SIO_000300: 7.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e-1

FS
type: SiteQuality
SIO_000300: 3.783e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.27e-1

QD
type: SiteQuality
SIO_000300: 1.29e1

GenotypeQuality
all individuals: 609
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1644
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 684
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1307
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1973
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8934
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62552
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.241002730206007e-4
allele num: 8058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.789999999999999e0

DP
type: SiteQuality
SIO_000300: 1.514444e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.854e0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.8e0

GenotypeQuality
all individuals: 1307
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38363
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1644
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 263
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8934
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.197339813275355e-5
allele num: 62552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.514444e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.8e0

QD
type: SiteQuality
SIO_000300: 9.789999999999999e0

FS
type: SiteQuality
SIO_000300: 1.854e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2238
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1643
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 197
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1321
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6732
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15840
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.269789021599424e-5
allele num: 63798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

MQRankSum
type: SiteQuality
SIO_000300: 6.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

FS
type: SiteQuality
SIO_000300: 4.495e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.722e1

DP
type: SiteQuality
SIO_000300: 1.562277e6

GenotypeQuality
all individuals: 354
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1326
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 84
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544687818591863e-5
allele num: 64738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16016
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 7.03358537014243e-4
allele num: 11374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9432
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.45e0

MQRankSum
type: SiteQuality
SIO_000300: 6.44e-1

DP
type: SiteQuality
SIO_000300: 1.582313e6

QD
type: SiteQuality
SIO_000300: 1.611e1

MQ
type: SiteQuality
SIO_000300: 5.965e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.32e-1

GenotypeQuality
all individuals: 1348
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6842
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44866
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1633
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16042
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.541022005794243e-5
allele num: 64892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8408
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.88e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.129e0

MQRankSum
type: SiteQuality
SIO_000300: -7.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

DP
type: SiteQuality
SIO_000300: 1.585133e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.25e0

QD
type: SiteQuality
SIO_000300: 9.619999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.22e-1

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6918
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1345
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46122
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.154603643525357e-5
allele num: 16248
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65726
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

DP
type: SiteQuality
SIO_000300: 1.600704e6

VQSLOD
type: SiteQuality
SIO_000300: 8.01e-1

QD
type: SiteQuality
SIO_000300: 1.377e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e0

MQ
type: SiteQuality
SIO_000300: 5.901e1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

GenotypeQuality
all individuals: 127
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46225
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1631
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16254
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.357934449422306e-4
allele num: 8482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65780
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.99e0

MQ
type: SiteQuality
SIO_000300: 5.416e1

DP
type: SiteQuality
SIO_000300: 1.602132e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

FS
type: SiteQuality
SIO_000300: 4.659e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-2

QD
type: SiteQuality
SIO_000300: 6.9e0

GenotypeQuality
all individuals: 148
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1630
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1352
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1329
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6908
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65814
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.747640685075148e-4
allele num: 11444
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.662e0

QD
type: SiteQuality
SIO_000300: 1.238e1

DP
type: SiteQuality
SIO_000300: 1.603559e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.78e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.49e-1

GenotypeQuality
all individuals: 7001
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1355
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1636
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1343
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46982
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9704
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.359434475258292e-4
allele num: 66204
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.612567e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 2.958e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-2

QD
type: SiteQuality
SIO_000300: 1.359e1

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7001
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 675
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1636
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 446
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169317118802619e-4
allele num: 8552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66204
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.359e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

DP
type: SiteQuality
SIO_000300: 1.612567e6

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-2

FS
type: SiteQuality
SIO_000300: 2.958e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.6e0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1354
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1347
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1632
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 47169
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.027000964320154e-5
allele num: 66368
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.026904908605463e-4
allele num: 9738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.078288353999514e-5
allele num: 16452
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.606e0

DP
type: SiteQuality
SIO_000300: 1.615348e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-1

QD
type: SiteQuality
SIO_000300: 1.083e1

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47363
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004988280545706e-5
allele num: 66556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.61e-1

QD
type: SiteQuality
SIO_000300: 1.146e1

FS
type: SiteQuality
SIO_000300: 2.547e0

DP
type: SiteQuality
SIO_000300: 1.617876e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.537e0

VQSLOD
type: SiteQuality
SIO_000300: 2.69e-1

GenotypeQuality
all individuals: 667
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47421
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.00228173411793e-5
allele num: 66616
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.837e0

FS
type: SiteQuality
SIO_000300: 1.753e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.47e-1

QD
type: SiteQuality
SIO_000300: 1.118e1

VQSLOD
type: SiteQuality
SIO_000300: 2.97e0

MQRankSum
type: SiteQuality
SIO_000300: 4.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.618254e6

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1342
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47414
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500960614793468e-5
allele num: 66624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0665e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.16e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.066e0

MQRankSum
type: SiteQuality
SIO_000300: 7.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

DP
type: SiteQuality
SIO_000300: 1.618283e6

QD
type: SiteQuality
SIO_000300: 1.337e1

GenotypeQuality
all individuals: 1341
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1623
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7009
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.502746675472038e-5
allele num: 66626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.618522e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.25e-1

QD
type: SiteQuality
SIO_000300: 1.225e1

VQSLOD
type: SiteQuality
SIO_000300: 2.43e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.594e0

MQRankSum
type: SiteQuality
SIO_000300: -2.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.7e-2

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeQuality
all individuals: 47430
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7011
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1350
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1342
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500960614793468e-5
allele num: 66624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.618472e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.43e0

FS
type: SiteQuality
SIO_000300: 1.102e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

QD
type: SiteQuality
SIO_000300: 1.273e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

GenotypeQuality
all individuals: 7013
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1344
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1350
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.971880083662561e-4
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.269e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.03e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

DP
type: SiteQuality
SIO_000300: 1.618653e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.319e0

FS
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1620
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 666
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1347
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7007
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.973500697350069e-4
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

VQSLOD
type: SiteQuality
SIO_000300: 9.13e-1

FS
type: SiteQuality
SIO_000300: 1.779e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.89e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.93e-1

DP
type: SiteQuality
SIO_000300: 1.618656e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.76e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.1e-2

QD
type: SiteQuality
SIO_000300: 1.587e1

GenotypeQuality
all individuals: 138
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47401
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1346
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1614
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5008254539997e-5
allele num: 66630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.618291e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.525e0

MQRankSum
type: SiteQuality
SIO_000300: -1.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.05e-1

FS
type: SiteQuality
SIO_000300: 8.36e-1

QD
type: SiteQuality
SIO_000300: 1.479e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.11e-1

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1614
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1346
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66626
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.915e0

MQ
type: SiteQuality
SIO_000300: 6.012e1

MQRankSum
type: SiteQuality
SIO_000300: 2.53e-1

FS
type: SiteQuality
SIO_000300: 1.927e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.184e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.006e0

VQSLOD
type: SiteQuality
SIO_000300: -7.11e-2

DP
type: SiteQuality
SIO_000300: 1.618492e6

QD
type: SiteQuality
SIO_000300: 1.759e1

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1344
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1342
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47379
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1614
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500915558490679e-5
allele num: 66626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.47e-1

FS
type: SiteQuality
SIO_000300: 5.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

QD
type: SiteQuality
SIO_000300: 1.277e1

DP
type: SiteQuality
SIO_000300: 1.618367e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.06e-1

GenotypeQuality
all individuals: 146
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47409
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1345
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1615
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.818402230573403e-4
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.27e-1

FS
type: SiteQuality
SIO_000300: 1.0624e1

DP
type: SiteQuality
SIO_000300: 1.618527e6

QD
type: SiteQuality
SIO_000300: 1.621e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.669e0

MQRankSum
type: SiteQuality
SIO_000300: 3.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.024e1

GenotypeQuality
all individuals: 47423
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1342
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 4.708e0

DP
type: SiteQuality
SIO_000300: 1.618411e6

QD
type: SiteQuality
SIO_000300: 1.335e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.79e-1

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47471
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501817198810561e-5
allele num: 66586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9780
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.981e0

QD
type: SiteQuality
SIO_000300: 1.727e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.718e0

DP
type: SiteQuality
SIO_000300: 1.618568e6

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.225e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47443
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7018
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1346
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502765087761481e-5
allele num: 66544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9770
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.34e-1

QD
type: SiteQuality
SIO_000300: 1.452e1

MQRankSum
type: SiteQuality
SIO_000300: 7.14e-1

FS
type: SiteQuality
SIO_000300: 8.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.72e0

DP
type: SiteQuality
SIO_000300: 1.618049e6

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47371
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1347
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.512363877023043e-5
allele num: 66484
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.244482173174873e-4
allele num: 16492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513317191283293e-4
allele num: 6608
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.39e-2

FS
type: SiteQuality
SIO_000300: 1.206e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.29e-1

QD
type: SiteQuality
SIO_000300: 1.425e1

DP
type: SiteQuality
SIO_000300: 1.617652e6

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1330
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7006
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1612
bin: 9.75e1
variant carriers: 6

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9758
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.639893229798593e-4
allele num: 16484
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.616894e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e0

QD
type: SiteQuality
SIO_000300: 1.434e1

FS
type: SiteQuality
SIO_000300: 2.259e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47339
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1606
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505026789476853e-5
allele num: 66444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.413e1

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 1.952e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.616597e6

MQ
type: SiteQuality
SIO_000300: 5.979e1

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e0

GenotypeQuality
all individuals: 1608
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1341
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47324
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7006
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.515624059244988e-5
allele num: 66436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.616577e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.653e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.72e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.244e1

VQSLOD
type: SiteQuality
SIO_000300: 1.4e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

FS
type: SiteQuality
SIO_000300: 1.251e0

GenotypeQuality
all individuals: 49
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 317
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1322
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47248
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1602
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9748
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.012864933265042e-5
allele num: 66382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.283e0

VQSLOD
type: SiteQuality
SIO_000300: -5.224e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 5.0633e1

MQ
type: SiteQuality
SIO_000300: 4.294e1

DP
type: SiteQuality
SIO_000300: 1.616163e6