9-124083642-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124083642
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124083642
    reference: chr 9
allele count: 322
allele frequency: 2.654094063731228e-3
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1312C>T
  hgvsp: ENSP00000445823.1:p.Arg438Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1288C>T
  hgvsp: ENSP00000409358.1:p.Arg430Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1288C>T
  hgvsp: ENSP00000362929.2:p.Arg430Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1288C>T
  hgvsp: ENSP00000362914.2:p.Arg430Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1288C>T
  hgvsp: ENSP00000340888.2:p.Arg430Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.634C>T
  hgvsp: ENSP00000362913.1:p.Arg212Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1288C>T
  hgvsp: ENSP00000416586.1:p.Arg430Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1321C>T
  hgvsp: ENSP00000377882.2:p.Arg441Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1441C>T
  hgvsp: ENSP00000362924.4:p.Arg481Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1321C>T
  hgvsp: ENSP00000411293.1:p.Arg441Cys
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 6.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 12476
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 8.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 9129
  bin: 3.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 5.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 4780
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7009
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5054
  bin: 4.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 5.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 13171
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 9.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4514
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg481Cys
num of homozygotes: 2
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

9-124083643-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124083643
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124083643
    reference: chr 9
allele count: 3
allele frequency: 2.472839974282464e-5
allele num: 121318
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1442G>A
  hgvsp: ENSP00000362924.4:p.Arg481His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1289G>A
  hgvsp: ENSP00000340888.2:p.Arg430His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1289G>A
  hgvsp: ENSP00000409358.1:p.Arg430His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.635G>A
  hgvsp: ENSP00000362913.1:p.Arg212His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1313G>A
  hgvsp: ENSP00000445823.1:p.Arg438His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1289G>A
  hgvsp: ENSP00000362914.2:p.Arg430His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1322G>A
  hgvsp: ENSP00000411293.1:p.Arg441His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1289G>A
  hgvsp: ENSP00000362929.2:p.Arg430His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1289G>A
  hgvsp: ENSP00000416586.1:p.Arg430His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1322G>A
  hgvsp: ENSP00000377882.2:p.Arg441His
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7028
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg481His
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

9-124083649-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124083649
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124083649
    reference: chr 9
allele count: 2
allele frequency: 1.648858989579211e-5
allele num: 121296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1295G>A
  hgvsp: ENSP00000362914.2:p.Gly432Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1448G>A
  hgvsp: ENSP00000362924.4:p.Gly483Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1295G>A
  hgvsp: ENSP00000362929.2:p.Gly432Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1295G>A
  hgvsp: ENSP00000409358.1:p.Gly432Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1319G>A
  hgvsp: ENSP00000445823.1:p.Gly440Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1295G>A
  hgvsp: ENSP00000340888.2:p.Gly432Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1328G>A
  hgvsp: ENSP00000411293.1:p.Gly443Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1328G>A
  hgvsp: ENSP00000377882.2:p.Gly443Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.641G>A
  hgvsp: ENSP00000362913.1:p.Gly214Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1295G>A
  hgvsp: ENSP00000416586.1:p.Gly432Asp
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9151
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4539
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly483Asp
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

9-124083656-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124083656
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124083656
    reference: chr 9
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1302C>G
  hgvsp: ENST00000449733.1:c.1302C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1326C>G
  hgvsp: ENST00000545652.1:c.1326C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1335C>G
  hgvsp: ENST00000394353.2:c.1335C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1302C>G
  hgvsp: ENST00000412819.1:c.1302C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1335C>G
  hgvsp: ENST00000436847.1:c.1335C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1302C>G
  hgvsp: ENST00000373808.2:c.1302C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1455C>G
  hgvsp: ENST00000373818.4:c.1455C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1302C>G
  hgvsp: ENST00000373823.3:c.1302C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.648C>G
  hgvsp: ENST00000373807.1:c.648C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1302C>G
  hgvsp: ENST00000341272.2:c.1302C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7017
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5042
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg485Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum

9-124083686-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124083686
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124083686
    reference: chr 9
allele count: 1
allele frequency: 8.278831029058698e-6
allele num: 120790
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1325+7T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1358+7T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1325+7T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1358+7T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1325+7T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1349+7T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.671+7T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1325+7T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1325+7T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1478+7T>C
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4703
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9048
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: c.1478+7T>C
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

9-124083693-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124083693
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124083693
    reference: chr 9
allele count: 4
allele frequency: 3.315484972564362e-5
allele num: 120646
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1358+14G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1349+14G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1325+14G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1358+14G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1325+14G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1478+14G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1325+14G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1325+14G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1325+14G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.671+14G>A
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6965
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9004
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD

9-124083700-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124083700
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124083700
    reference: chr 9
allele count: 3
allele frequency: 2.490494612229989e-5
allele num: 120458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1358+21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1325+21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.671+21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1325+21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1349+21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1325+21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1478+21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1358+21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1325+21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1325+21G>A
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6953
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5029
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8979
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

9-124083700-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124083700
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124083700
    reference: chr 9
allele count: 2
allele frequency: 1.660329741486659e-5
allele num: 120458
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1325+21G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1478+21G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.671+21G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1349+21G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1325+21G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1358+21G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1325+21G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1325+21G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1358+21G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1325+21G>T
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5029
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11372
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8979
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11484
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6953
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3438
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP

9-124083707-T-TCACA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124083707
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124083711
    reference: chr 9
allele count: 1
allele frequency: 8.311861025683651e-6
allele num: 120310
alternate allele: TCACA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1325+29_1325+30insACAC
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1325+29_1325+30insACAC
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.671+29_671+30insACAC
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1349+29_1349+30insACAC
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1478+29_1478+30insACAC
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1325+29_1325+30insACAC
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1325+29_1325+30insACAC
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1325+29_1325+30insACAC
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1358+29_1358+30insACAC
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1358+29_1358+30insACAC
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6937
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1935
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11198
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2117
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

9-124083708-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124083708
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124083708
    reference: chr 9
allele count: 3
allele frequency: 2.496629550107355e-5
allele num: 120162
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1358+29C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1358+29C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1325+29C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1325+29C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1325+29C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1325+29C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1349+29C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.671+29C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1478+29C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1325+29C>T
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6932
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8924
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5023
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4138
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10554
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7416
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2097
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

9-124083709-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124083709
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124083709
    reference: chr 9
allele count: 2
allele frequency: 1.664170411050091e-5
allele num: 120180
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1478+30G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1325+30G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1358+30G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1325+30G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1349+30G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1325+30G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1325+30G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1325+30G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1358+30G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.671+30G>A
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11054
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5022
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6927
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10568
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14049
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3442
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum

9-124083716-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124083716
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124083716
    reference: chr 9
allele count: 1
allele frequency: 8.337085021593051e-6
allele num: 119946
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1325+37T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1349+37T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1358+37T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.671+37T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1325+37T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1325+37T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1325+37T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1358+37T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1325+37T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1478+37T>C
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3988
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10679
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5016
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8857
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4360
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2093
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
reference allele: T
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

9-124083717-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124083717
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124083717
    reference: chr 9
allele count: 1
allele frequency: 8.344459279038718e-6
allele num: 119840
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1325+38A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1478+38A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1358+38A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1325+38A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1325+38A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1325+38A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1349+38A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1325+38A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1358+38A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.671+38A>G
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10621
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5015
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9417
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8845
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2316
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12991
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1654
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

9-124083723-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124083723
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124083723
    reference: chr 9
allele count: 1
allele frequency: 8.363022061652199e-6
allele num: 119574
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1325+44T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1358+44T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1325+44T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1349+44T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1478+44T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1325+44T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.671+44T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1325+44T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1325+44T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1358+44T>C
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8772
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6878
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5008
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2769
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3191
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6736
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

9-124086781-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124086781
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124086781
    reference: chr 9
allele count: 1
allele frequency: 4.903402961655389e-5
allele num: 20394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1359-51G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1350-51G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1326-51G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1326-51G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1326-51G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.672-51G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1326-51G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1326-51G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1359-51G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1479-51G>A
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28560
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

9-124086804-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124086804
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124086804
    reference: chr 9
allele count: 1
allele frequency: 4.899559039686429e-5
allele num: 20410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1326-28T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1326-28T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1326-28T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1359-28T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1479-28T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1326-28T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1326-28T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1350-28T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.672-28T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1359-28T>C
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30637
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4713
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff

9-124086820-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124086820
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124086820
    reference: chr 9
allele count: 1
allele frequency: 4.881859011911736e-5
allele num: 20484
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1326-12T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1326-12T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1326-12T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1479-12T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1326-12T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1359-12T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1359-12T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1326-12T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1350-12T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.672-12T>A
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5366
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

9-124086820-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124086820
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124086820
    reference: chr 9
allele count: 1
allele frequency: 4.881859011911736e-5
allele num: 20484
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1326-12T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1359-12T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1326-12T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1479-12T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1326-12T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.672-12T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1350-12T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1326-12T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1326-12T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1359-12T>C
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3972
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2409
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

9-124086844-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124086844
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124086844
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 20638
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1491G>A
  hgvsp: ENST00000373818.4:c.1491G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1371G>A
  hgvsp: ENST00000394353.2:c.1371G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1338G>A
  hgvsp: ENST00000373808.2:c.1338G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1338G>A
  hgvsp: ENST00000341272.2:c.1338G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1338G>A
  hgvsp: ENST00000373823.3:c.1338G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.684G>A
  hgvsp: ENST00000373807.1:c.684G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1362G>A
  hgvsp: ENST00000545652.1:c.1362G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1338G>A
  hgvsp: ENST00000449733.1:c.1338G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1338G>A
  hgvsp: ENST00000412819.1:c.1338G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1371G>A
  hgvsp: ENST00000436847.1:c.1371G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6566
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33519
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gln497Gln
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD

9-124086848-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124086848
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124086848
    reference: chr 9
allele count: 1
allele frequency: 4.840739665020815e-5
allele num: 20658
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1375A>G
  hgvsp: ENSP00000411293.1:p.Thr459Ala
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1342A>G
  hgvsp: ENSP00000362914.2:p.Thr448Ala
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1375A>G
  hgvsp: ENSP00000377882.2:p.Thr459Ala
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1342A>G
  hgvsp: ENSP00000416586.1:p.Thr448Ala
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1342A>G
  hgvsp: ENSP00000409358.1:p.Thr448Ala
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1342A>G
  hgvsp: ENSP00000340888.2:p.Thr448Ala
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1342A>G
  hgvsp: ENSP00000362929.2:p.Thr448Ala
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1495A>G
  hgvsp: ENSP00000362924.4:p.Thr499Ala
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.688A>G
  hgvsp: ENSP00000362913.1:p.Thr230Ala
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1366A>G
  hgvsp: ENSP00000445823.1:p.Thr456Ala
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6730
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33391
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr499Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

9-124086856-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124086856
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124086856
    reference: chr 9
allele count: 1
allele frequency: 4.844491812808837e-5
allele num: 20642
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1383T>A
  hgvsp: ENSP00000377882.2:p.Asp461Glu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1350T>A
  hgvsp: ENSP00000362914.2:p.Asp450Glu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1383T>A
  hgvsp: ENSP00000411293.1:p.Asp461Glu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1374T>A
  hgvsp: ENSP00000445823.1:p.Asp458Glu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1350T>A
  hgvsp: ENSP00000416586.1:p.Asp450Glu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1350T>A
  hgvsp: ENSP00000362929.2:p.Asp450Glu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1503T>A
  hgvsp: ENSP00000362924.4:p.Asp501Glu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.696T>A
  hgvsp: ENSP00000362913.1:p.Asp232Glu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1350T>A
  hgvsp: ENSP00000409358.1:p.Asp450Glu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1350T>A
  hgvsp: ENSP00000340888.2:p.Asp450Glu
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1555
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6781
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp501Glu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP

9-124086863-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124086863
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124086863
    reference: chr 9
allele count: 1
allele frequency: 4.851072086931212e-5
allele num: 20614
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1510G>A
  hgvsp: ENSP00000362924.4:p.Ala504Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1381G>A
  hgvsp: ENSP00000445823.1:p.Ala461Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1357G>A
  hgvsp: ENSP00000340888.2:p.Ala453Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1357G>A
  hgvsp: ENSP00000362914.2:p.Ala453Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1357G>A
  hgvsp: ENSP00000416586.1:p.Ala453Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1390G>A
  hgvsp: ENSP00000377882.2:p.Ala464Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1390G>A
  hgvsp: ENSP00000411293.1:p.Ala464Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1357G>A
  hgvsp: ENSP00000362929.2:p.Ala453Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1357G>A
  hgvsp: ENSP00000409358.1:p.Ala453Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.703G>A
  hgvsp: ENSP00000362913.1:p.Ala235Thr
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33043
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala504Thr
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD

9-124086871-T-TGCCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124086871
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124086875
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 20592
alternate allele: TGCCA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1366_1369dupGCCA
  hgvsp: ENSP00000362914.2:p.Ile457SerfsTer9
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1366_1369dupGCCA
  hgvsp: ENSP00000362929.2:p.Ile457SerfsTer9
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1519_1522dupGCCA
  hgvsp: ENSP00000362924.4:p.Ile508SerfsTer9
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.712_715dupGCCA
  hgvsp: ENSP00000362913.1:p.Ile239SerfsTer9
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1366_1369dupGCCA
  hgvsp: ENSP00000340888.2:p.Ile457SerfsTer9
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1390_1393dupGCCA
  hgvsp: ENSP00000445823.1:p.Ile465SerfsTer9
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1366_1369dupGCCA
  hgvsp: ENSP00000416586.1:p.Ile457SerfsTer9
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1366_1369dupGCCA
  hgvsp: ENSP00000409358.1:p.Ile457SerfsTer9
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1399_1402dupGCCA
  hgvsp: ENSP00000377882.2:p.Ile468SerfsTer9
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1399_1402dupGCCA
  hgvsp: ENSP00000411293.1:p.Ile468SerfsTer9
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: frameshift
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5750
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32932
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1727
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile508SerfsTer9
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

9-124086933-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124086933
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124086933
    reference: chr 9
allele count: 1
allele frequency: 5.231219920485457e-5
allele num: 19116
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1416+11C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1416+11C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1416+11C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1449+11C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1569+11C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1416+11C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.762+11C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1440+11C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1416+11C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1449+11C>G
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20385
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3174
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1383
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

9-124086936-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124086936
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124086936
    reference: chr 9
allele count: 1
allele frequency: 5.274818018778352e-5
allele num: 18958
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.762+14A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1416+14A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1449+14A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1416+14A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1440+14A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1416+14A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1416+14A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1569+14A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1449+14A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1416+14A>G
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20087
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5334
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

9-124086938-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124086938
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124086938
    reference: chr 9
allele count: 22
allele frequency: 1.142738416787866e-3
allele num: 19252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.762+16C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1416+16C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1416+16C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1416+16C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1416+16C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1440+16C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1416+16C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1449+16C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1569+16C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1449+16C>T
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20158
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2648
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

9-124086939-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124086939
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124086939
    reference: chr 9
allele count: 1
allele frequency: 5.203455094182537e-5
allele num: 19218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1416+17G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1440+17G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1449+17G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1416+17G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1449+17G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.762+17G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1416+17G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1416+17G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1416+17G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1569+17G>A
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19578
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ

9-124086964-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124086964
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124086964
    reference: chr 9
allele count: 1
allele frequency: 5.279831045406547e-5
allele num: 18940
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.762+42T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1416+42T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1569+42T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1416+42T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1416+42T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1440+42T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1416+42T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1449+42T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1449+42T>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1416+42T>A
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16646
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5356
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6099
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

9-124086964-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124086964
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124086964
    reference: chr 9
allele count: 3
allele frequency: 1.583949313621964e-4
allele num: 18940
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1449+42T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1416+42T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1416+42T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1449+42T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1416+42T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1569+42T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1440+42T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1416+42T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.762+42T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1416+42T>C
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16646
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6099
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1197
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

9-124086966-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124086966
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124086966
    reference: chr 9
allele count: 1
allele frequency: 5.287088928835783e-5
allele num: 18914
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.762+44G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1440+44G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1416+44G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1449+44G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1449+44G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1416+44G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1416+44G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1416+44G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1569+44G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1416+44G>A
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16598
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/9-124088740-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088740
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088740
    reference: chr 9
allele count: 1637
allele frequency: 1.410525952988213e-2
allele num: 116056
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.763-50C>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1417-50C>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1441-50C>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1417-50C>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1417-50C>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1450-50C>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1417-50C>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1417-50C>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1570-50C>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1450-50C>A
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 7.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 7284
  bin: 1.25e1
  variant carriers: 161
genotype depth: GenotypeDepth
  all individuals: 13730
  bin: 2.25e1
  variant carriers: 309
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 7.5e0
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 3.75e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 9438
  bin: 2.75e1
  variant carriers: 203
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 8.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 8.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 1121
  bin: 4.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 12768
  bin: 1.75e1
  variant carriers: 322
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 6.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 9.75e1
  variant carriers: 162
genotype depth: GenotypeDepth
  all individuals: 5039
  bin: 3.25e1
  variant carriers: 123
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 9.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 8.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.5e0
  variant carriers: 2
num of homozygotes: 17
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

9-124088745-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088745
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088745
    reference: chr 9
allele count: 6
allele frequency: 5.161023947151115e-5
allele num: 116256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1450-45G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1441-45G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1417-45G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1417-45G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.763-45G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1417-45G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1417-45G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1450-45G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1417-45G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1570-45G>T
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9197
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9745
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2217
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1125
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13296
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

9-124088753-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088753
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088753
    reference: chr 9
allele count: 4
allele frequency: 3.426065506372482e-5
allele num: 116752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1417-37C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1570-37C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1450-37C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1450-37C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1417-37C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1417-37C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1441-37C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1417-37C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1417-37C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.763-37C>T
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3845
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5699
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10770
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21996
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19368
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1372
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

9-124088756-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088756
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088756
    reference: chr 9
allele count: 1
allele frequency: 8.550516451193652e-6
allele num: 116952
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1441-34A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1570-34A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1417-34A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1417-34A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.763-34A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1417-34A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1450-34A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1417-34A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1450-34A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1417-34A>G
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4942
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11071
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1802
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2261
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20696
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

9-124088757-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088757
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088757
    reference: chr 9
allele count: 1
allele frequency: 8.545693824881643e-6
allele num: 117018
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1441-33G>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1570-33G>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.763-33G>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1450-33G>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1417-33G>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1417-33G>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1417-33G>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1417-33G>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1417-33G>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1450-33G>C
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4756
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6246
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11159
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2254
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

9-124088758-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088758
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088758
    reference: chr 9
allele count: 1
allele frequency: 8.542335816305611e-6
allele num: 117064
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1417-32G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.763-32G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1417-32G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1450-32G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1417-32G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1417-32G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1417-32G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1441-32G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1450-32G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1570-32G>T
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11229
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2974
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21051
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2213
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

9-124088760-CCCTGACTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088760
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088752
    reference: chr 9
allele count: 1
allele frequency: 8.536502082906508e-6
allele num: 117144
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2086
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1960
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: CCCTGACTT
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum

9-124088766-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088766
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088766
    reference: chr 9
allele count: 1
allele frequency: 8.504124500382685e-6
allele num: 117590
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1417-24C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.763-24C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1417-24C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1417-24C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1417-24C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1450-24C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1441-24C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1450-24C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1417-24C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1570-24C>T
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6772
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4399
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1931
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

9-124088768-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088768
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088768
    reference: chr 9
allele count: 104280
allele frequency: 8.689420705286314e-1
allele num: 120008
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1417-22T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1570-22T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1441-22T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1417-22T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1450-22T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1417-22T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1417-22T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1450-22T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1417-22T>C
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.763-22T>C
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 6.25e1
  variant carriers: 927
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.75e1
  variant carriers: 247
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 4.75e1
  variant carriers: 4406
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 5.75e1
  variant carriers: 1621
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 1.75e1
  variant carriers: 3331
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 5.25e1
  variant carriers: 2754
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 8577
  bin: 2.75e1
  variant carriers: 8166
genotype depth: GenotypeDepth
  all individuals: 6449
  bin: 4.25e1
  variant carriers: 6418
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 7.5e0
  variant carriers: 448
genotype depth: GenotypeDepth
  all individuals: 9300
  bin: 3.25e1
  variant carriers: 9136
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 9.25e1
  variant carriers: 159
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.25e1
  variant carriers: 353
genotype depth: GenotypeDepth
  all individuals: 8266
  bin: 3.75e1
  variant carriers: 8223
genotype depth: GenotypeDepth
  all individuals: 6229
  bin: 2.25e1
  variant carriers: 5796
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 1.25e1
  variant carriers: 1503
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 183
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.75e1
  variant carriers: 548
genotype depth: GenotypeDepth
  all individuals: 5044
  bin: 9.75e1
  variant carriers: 5044
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.75e1
  variant carriers: 103
genotype quality: GenotypeQuality
  all individuals: 1418
  bin: 8.75e1
  variant carriers: 1415
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 2.25e1
  variant carriers: 219
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.25e1
  variant carriers: 63
num of homozygotes: 45442
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum

9-124088769-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088769
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088769
    reference: chr 9
allele count: 6
allele frequency: 5.016974095690419e-5
allele num: 119594
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1417-21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1450-21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1441-21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1417-21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1417-21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1417-21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1450-21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1570-21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.763-21G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1417-21G>A
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12037
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10824
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25056
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1850
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4655
  bin: 9.75e1
  variant carriers: 6
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

9-124088774-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088774
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088774
    reference: chr 9
allele count: 1
allele frequency: 8.357011532675915e-6
allele num: 119660
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1570-16C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1450-16C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.763-16C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1417-16C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1417-16C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1417-16C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1417-16C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1417-16C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1441-16C>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1450-16C>G
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25144
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11191
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1768
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1824
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

9-124088790-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088790
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088790
    reference: chr 9
allele count: 4
allele frequency: 3.344537534072476e-5
allele num: 119598
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1417A>G
  hgvsp: ENSP00000340888.2:p.Ser473Gly
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.763A>G
  hgvsp: ENSP00000362913.1:p.Ser255Gly
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1417A>G
  hgvsp: ENSP00000409358.1:p.Ser473Gly
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1417A>G
  hgvsp: ENSP00000362914.2:p.Ser473Gly
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1450A>G
  hgvsp: ENSP00000377882.2:p.Ser484Gly
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1570A>G
  hgvsp: ENSP00000362924.4:p.Ser524Gly
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1441A>G
  hgvsp: ENSP00000445823.1:p.Ser481Gly
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1450A>G
  hgvsp: ENSP00000411293.1:p.Ser484Gly
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1417A>G
  hgvsp: ENSP00000362929.2:p.Ser473Gly
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1417A>G
  hgvsp: ENSP00000416586.1:p.Ser473Gly
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12412
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25542
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11752
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser524Gly
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

9-124088793-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088793
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088793
    reference: chr 9
allele count: 6
allele frequency: 5.018148972115819e-5
allele num: 119566
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.766C>T
  hgvsp: ENSP00000362913.1:p.Arg256Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1453C>T
  hgvsp: ENSP00000377882.2:p.Arg485Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1453C>T
  hgvsp: ENSP00000411293.1:p.Arg485Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1444C>T
  hgvsp: ENSP00000445823.1:p.Arg482Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1573C>T
  hgvsp: ENSP00000362924.4:p.Arg525Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1420C>T
  hgvsp: ENSP00000362914.2:p.Arg474Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1420C>T
  hgvsp: ENSP00000362929.2:p.Arg474Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1420C>T
  hgvsp: ENSP00000340888.2:p.Arg474Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1420C>T
  hgvsp: ENSP00000416586.1:p.Arg474Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1420C>T
  hgvsp: ENSP00000409358.1:p.Arg474Cys
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25604
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11785
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg525Cys
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

9-124088794-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088794
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088794
    reference: chr 9
allele count: 25
allele frequency: 2.090720545928949e-4
allele num: 119576
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1421G>A
  hgvsp: ENSP00000416586.1:p.Arg474His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1421G>A
  hgvsp: ENSP00000362929.2:p.Arg474His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1574G>A
  hgvsp: ENSP00000362924.4:p.Arg525His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1421G>A
  hgvsp: ENSP00000362914.2:p.Arg474His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1421G>A
  hgvsp: ENSP00000409358.1:p.Arg474His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1421G>A
  hgvsp: ENSP00000340888.2:p.Arg474His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1445G>A
  hgvsp: ENSP00000445823.1:p.Arg482His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.767G>A
  hgvsp: ENSP00000362913.1:p.Arg256His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1454G>A
  hgvsp: ENSP00000377882.2:p.Arg485His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1454G>A
  hgvsp: ENSP00000411293.1:p.Arg485His
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11812
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25615
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12602
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1677
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg525His
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

9-124088796-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088796
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088796
    reference: chr 9
allele count: 8
allele frequency: 6.691201070592172e-5
allele num: 119560
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1423G>T
  hgvsp: ENSP00000362929.2:p.Val475Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1423G>T
  hgvsp: ENSP00000409358.1:p.Val475Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1576G>T
  hgvsp: ENSP00000362924.4:p.Val526Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1423G>T
  hgvsp: ENSP00000340888.2:p.Val475Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1423G>T
  hgvsp: ENSP00000362914.2:p.Val475Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1447G>T
  hgvsp: ENSP00000445823.1:p.Val483Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1456G>T
  hgvsp: ENSP00000377882.2:p.Val486Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1456G>T
  hgvsp: ENSP00000411293.1:p.Val486Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1423G>T
  hgvsp: ENSP00000416586.1:p.Val475Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.769G>T
  hgvsp: ENSP00000362913.1:p.Val257Leu
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12648
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11785
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val526Leu
num of homozygotes: 1
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

9-124088806-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088806
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088806
    reference: chr 9
allele count: 3
allele frequency: 2.510754398004787e-5
allele num: 119486
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1433G>A
  hgvsp: ENSP00000416586.1:p.Gly478Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1433G>A
  hgvsp: ENSP00000362929.2:p.Gly478Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1466G>A
  hgvsp: ENSP00000411293.1:p.Gly489Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1457G>A
  hgvsp: ENSP00000445823.1:p.Gly486Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1433G>A
  hgvsp: ENSP00000362914.2:p.Gly478Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1433G>A
  hgvsp: ENSP00000340888.2:p.Gly478Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1466G>A
  hgvsp: ENSP00000377882.2:p.Gly489Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1433G>A
  hgvsp: ENSP00000409358.1:p.Gly478Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.779G>A
  hgvsp: ENSP00000362913.1:p.Gly260Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1586G>A
  hgvsp: ENSP00000362924.4:p.Gly529Asp
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11773
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7686
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly529Asp
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

9-124088806-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088806
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088806
    reference: chr 9
allele count: 1
allele frequency: 8.369181326682624e-6
allele num: 119486
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1433G>T
  hgvsp: ENSP00000416586.1:p.Gly478Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1466G>T
  hgvsp: ENSP00000377882.2:p.Gly489Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1433G>T
  hgvsp: ENSP00000362914.2:p.Gly478Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1586G>T
  hgvsp: ENSP00000362924.4:p.Gly529Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1433G>T
  hgvsp: ENSP00000362929.2:p.Gly478Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1433G>T
  hgvsp: ENSP00000340888.2:p.Gly478Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.779G>T
  hgvsp: ENSP00000362913.1:p.Gly260Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1433G>T
  hgvsp: ENSP00000409358.1:p.Gly478Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1466G>T
  hgvsp: ENSP00000411293.1:p.Gly489Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1457G>T
  hgvsp: ENSP00000445823.1:p.Gly486Val
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly529Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

9-124088816-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088816
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088816
    reference: chr 9
allele count: 1
allele frequency: 8.384338056510439e-6
allele num: 119270
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1443C>G
  hgvsp: ENST00000373808.2:c.1443C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1476C>G
  hgvsp: ENST00000394353.2:c.1476C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1443C>G
  hgvsp: ENST00000449733.1:c.1443C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1443C>G
  hgvsp: ENST00000341272.2:c.1443C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1467C>G
  hgvsp: ENST00000545652.1:c.1467C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1443C>G
  hgvsp: ENST00000373823.3:c.1443C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1443C>G
  hgvsp: ENST00000412819.1:c.1443C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1596C>G
  hgvsp: ENST00000373818.4:c.1596C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.789C>G
  hgvsp: ENST00000373807.1:c.789C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1476C>G
  hgvsp: ENST00000436847.1:c.1476C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12609
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11750
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro532Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum

9-124088816-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088816
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088816
    reference: chr 9
allele count: 13
allele frequency: 1.089963947346357e-4
allele num: 119270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1443C>T
  hgvsp: ENST00000412819.1:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1443C>T
  hgvsp: ENST00000373808.2:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1443C>T
  hgvsp: ENST00000373823.3:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1467C>T
  hgvsp: ENST00000545652.1:c.1467C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1443C>T
  hgvsp: ENST00000449733.1:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1596C>T
  hgvsp: ENST00000373818.4:c.1596C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1443C>T
  hgvsp: ENST00000341272.2:c.1443C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1476C>T
  hgvsp: ENST00000394353.2:c.1476C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1476C>T
  hgvsp: ENST00000436847.1:c.1476C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.789C>T
  hgvsp: ENST00000373807.1:c.789C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12609
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11750
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25900
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro532Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP

9-124088817-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088817
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088817
    reference: chr 9
allele count: 9
allele frequency: 7.547676154375137e-5
allele num: 119242
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1444G>A
  hgvsp: ENSP00000340888.2:p.Ala482Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1468G>A
  hgvsp: ENSP00000445823.1:p.Ala490Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.790G>A
  hgvsp: ENSP00000362913.1:p.Ala264Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1444G>A
  hgvsp: ENSP00000409358.1:p.Ala482Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1444G>A
  hgvsp: ENSP00000362914.2:p.Ala482Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1477G>A
  hgvsp: ENSP00000411293.1:p.Ala493Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1597G>A
  hgvsp: ENSP00000362924.4:p.Ala533Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1444G>A
  hgvsp: ENSP00000362929.2:p.Ala482Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1444G>A
  hgvsp: ENSP00000416586.1:p.Ala482Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1477G>A
  hgvsp: ENSP00000377882.2:p.Ala493Thr
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11772
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25881
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala533Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

9-124088828-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088828
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088828
    reference: chr 9
allele count: 2
allele frequency: 1.683785149014986e-5
allele num: 118780
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1455G>A
  hgvsp: ENSP00000362929.2:p.Met485Ile
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1455G>A
  hgvsp: ENSP00000409358.1:p.Met485Ile
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1455G>A
  hgvsp: ENSP00000416586.1:p.Met485Ile
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1455G>A
  hgvsp: ENSP00000362914.2:p.Met485Ile
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1479G>A
  hgvsp: ENSP00000445823.1:p.Met493Ile
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1455G>A
  hgvsp: ENSP00000340888.2:p.Met485Ile
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1488G>A
  hgvsp: ENSP00000377882.2:p.Met496Ile
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1488G>A
  hgvsp: ENSP00000411293.1:p.Met496Ile
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.801G>A
  hgvsp: ENSP00000362913.1:p.Met267Ile
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1608G>A
  hgvsp: ENSP00000362924.4:p.Met536Ile
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Met536Ile
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

9-124088839-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088839
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088839
    reference: chr 9
allele count: 2
allele frequency: 1.693652191585936e-5
allele num: 118088
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1466G>A
  hgvsp: ENSP00000416586.1:p.Gly489Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1466G>A
  hgvsp: ENSP00000340888.2:p.Gly489Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1499G>A
  hgvsp: ENSP00000411293.1:p.Gly500Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1466G>A
  hgvsp: ENSP00000362929.2:p.Gly489Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1490G>A
  hgvsp: ENSP00000445823.1:p.Gly497Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.812G>A
  hgvsp: ENSP00000362913.1:p.Gly271Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1466G>A
  hgvsp: ENSP00000409358.1:p.Gly489Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1466G>A
  hgvsp: ENSP00000362914.2:p.Gly489Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1499G>A
  hgvsp: ENSP00000377882.2:p.Gly500Asp
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1619G>A
  hgvsp: ENSP00000362924.4:p.Gly540Asp
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2559
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25319
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gly540Asp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

9-124088840-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088840
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088839
    reference: chr 9
allele count: 1
allele frequency: 8.479175145841813e-6
allele num: 117936
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1503delG
  hgvsp: ENSP00000377882.2:p.Lys502SerfsTer3
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1470delG
  hgvsp: ENSP00000362929.2:p.Lys491SerfsTer3
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1470delG
  hgvsp: ENSP00000362914.2:p.Lys491SerfsTer3
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1470delG
  hgvsp: ENSP00000409358.1:p.Lys491SerfsTer3
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1623delG
  hgvsp: ENSP00000362924.4:p.Lys542SerfsTer3
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1494delG
  hgvsp: ENSP00000445823.1:p.Lys499SerfsTer3
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.816delG
  hgvsp: ENSP00000362913.1:p.Lys273SerfsTer3
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1470delG
  hgvsp: ENSP00000340888.2:p.Lys491SerfsTer3
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1503delG
  hgvsp: ENSP00000411293.1:p.Lys502SerfsTer3
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1470delG
  hgvsp: ENSP00000416586.1:p.Lys491SerfsTer3
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11481
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7207
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys542SerfsTer3
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: TG
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

9-124088847-CCCATGATCATCTA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088847
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088834
    reference: chr 9
allele count: 1
allele frequency: 8.537230863797019e-6
allele num: 117134
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsp: ENSP00000416586.1:p.Met493ArgfsTer41
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsp: ENSP00000362924.4:p.Met544ArgfsTer41
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsp: ENSP00000362913.1:p.Met275ArgfsTer41
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsp: ENSP00000340888.2:p.Met493ArgfsTer41
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsp: ENSP00000411293.1:p.Met504ArgfsTer41
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsp: ENSP00000409358.1:p.Met493ArgfsTer41
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsp: ENSP00000362914.2:p.Met493ArgfsTer41
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsp: ENSP00000377882.2:p.Met504ArgfsTer41
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsp: ENSP00000445823.1:p.Met501ArgfsTer41
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362912
  ensembl transcript: ENST00000373806
  gene symbol: GSN
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsp: ENSP00000362929.2:p.Met493ArgfsTer41
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 24682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11282
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10610
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3738
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4693
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4488
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Met544ArgfsTer41
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: CCCATGATCATCTA
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

9-124088850-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088850
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088850
    reference: chr 9
allele count: 4
allele frequency: 3.433181701141533e-5
allele num: 116510
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1477A>T
  hgvsp: ENSP00000340888.2:p.Met493Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1630A>T
  hgvsp: ENSP00000362924.4:p.Met544Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1477A>T
  hgvsp: ENSP00000362914.2:p.Met493Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1477A>T
  hgvsp: ENSP00000409358.1:p.Met493Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1477A>T
  hgvsp: ENSP00000416586.1:p.Met493Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1477A>T
  hgvsp: ENSP00000362929.2:p.Met493Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1510A>T
  hgvsp: ENSP00000411293.1:p.Met504Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1510A>T
  hgvsp: ENSP00000377882.2:p.Met504Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1501A>T
  hgvsp: ENSP00000445823.1:p.Met501Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.823A>T
  hgvsp: ENSP00000362913.1:p.Met275Leu
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11122
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24226
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9747
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Met544Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

9-124088857-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088857
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088857
    reference: chr 9
allele count: 1
allele frequency: 8.74018913769294e-6
allele num: 114414
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1508T>C
  hgvsp: ENSP00000445823.1:p.Ile503Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1484T>C
  hgvsp: ENSP00000362914.2:p.Ile495Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1637T>C
  hgvsp: ENSP00000362924.4:p.Ile546Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.830T>C
  hgvsp: ENSP00000362913.1:p.Ile277Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1517T>C
  hgvsp: ENSP00000377882.2:p.Ile506Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1484T>C
  hgvsp: ENSP00000409358.1:p.Ile495Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1484T>C
  hgvsp: ENSP00000362929.2:p.Ile495Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1484T>C
  hgvsp: ENSP00000416586.1:p.Ile495Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1517T>C
  hgvsp: ENSP00000411293.1:p.Ile506Thr
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1484T>C
  hgvsp: ENSP00000340888.2:p.Ile495Thr
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21712
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7297
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile546Thr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP

9-124088858-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088858
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088858
    reference: chr 9
allele count: 22
allele frequency: 1.934542129051547e-4
allele num: 113722
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1638C>T
  hgvsp: ENST00000373818.4:c.1638C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1485C>T
  hgvsp: ENST00000341272.2:c.1485C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1485C>T
  hgvsp: ENST00000373808.2:c.1485C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1485C>T
  hgvsp: ENST00000449733.1:c.1485C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1518C>T
  hgvsp: ENST00000394353.2:c.1518C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1518C>T
  hgvsp: ENST00000436847.1:c.1518C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1509C>T
  hgvsp: ENST00000545652.1:c.1509C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1485C>T
  hgvsp: ENST00000373823.3:c.1485C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.831C>T
  hgvsp: ENST00000373807.1:c.831C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1485C>T
  hgvsp: ENST00000412819.1:c.1485C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10314
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6828
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20781
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1711
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile546Ile
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP

9-124088860-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088860
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088860
    reference: chr 9
allele count: 48
allele frequency: 4.25607377194538e-4
allele num: 112780
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1487A>G
  hgvsp: ENSP00000416586.1:p.Tyr496Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1487A>G
  hgvsp: ENSP00000362929.2:p.Tyr496Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1520A>G
  hgvsp: ENSP00000411293.1:p.Tyr507Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362912
  ensembl transcript: ENST00000373806
  gene symbol: GSN
  hgvsc: ENST00000373806.1:c.-196A>G
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1640A>G
  hgvsp: ENSP00000362924.4:p.Tyr547Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1511A>G
  hgvsp: ENSP00000445823.1:p.Tyr504Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.833A>G
  hgvsp: ENSP00000362913.1:p.Tyr278Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1487A>G
  hgvsp: ENSP00000340888.2:p.Tyr496Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1487A>G
  hgvsp: ENSP00000409358.1:p.Tyr496Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1520A>G
  hgvsp: ENSP00000377882.2:p.Tyr507Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1487A>G
  hgvsp: ENSP00000362914.2:p.Tyr496Cys
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10764
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9682
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6373
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2129
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr547Cys
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

9-124088865-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088865
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088865
    reference: chr 9
allele count: 1
allele frequency: 9.026248330144059e-6
allele num: 110788
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1492G>T
  hgvsp: ENSP00000416586.1:p.Gly498Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362912
  ensembl transcript: ENST00000373806
  gene symbol: GSN
  hgvsc: ENST00000373806.1:c.-191G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1492G>T
  hgvsp: ENSP00000362914.2:p.Gly498Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.838G>T
  hgvsp: ENSP00000362913.1:p.Gly280Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1492G>T
  hgvsp: ENSP00000409358.1:p.Gly498Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1492G>T
  hgvsp: ENSP00000340888.2:p.Gly498Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1525G>T
  hgvsp: ENSP00000377882.2:p.Gly509Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1492G>T
  hgvsp: ENSP00000362929.2:p.Gly498Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1645G>T
  hgvsp: ENSP00000362924.4:p.Gly549Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1516G>T
  hgvsp: ENSP00000445823.1:p.Gly506Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1525G>T
  hgvsp: ENSP00000411293.1:p.Gly509Cys
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8098
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4871
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16367
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13957
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly549Cys
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

9-124088867-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088867
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088867
    reference: chr 9
allele count: 5
allele frequency: 4.627572930549385e-5
allele num: 108048
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1647C>T
  hgvsp: ENST00000373818.4:c.1647C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1518C>T
  hgvsp: ENST00000545652.1:c.1518C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1494C>T
  hgvsp: ENST00000373808.2:c.1494C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1494C>T
  hgvsp: ENST00000373823.3:c.1494C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.840C>T
  hgvsp: ENST00000373807.1:c.840C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1494C>T
  hgvsp: ENST00000449733.1:c.1494C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1494C>T
  hgvsp: ENST00000412819.1:c.1494C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362912
  ensembl transcript: ENST00000373806
  gene symbol: GSN
  hgvsc: ENST00000373806.1:c.-189C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1494C>T
  hgvsp: ENST00000341272.2:c.1494C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1527C>T
  hgvsp: ENST00000436847.1:c.1527C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1527C>T
  hgvsp: ENST00000394353.2:c.1527C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5119
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5979
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6081
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18093
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5836
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly549Gly
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

9-124088868-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088868
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088868
    reference: chr 9
allele count: 1
allele frequency: 9.259430730198708e-6
allele num: 107998
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1495G>A
  hgvsp: ENSP00000362914.2:p.Gly499Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362912
  ensembl transcript: ENST00000373806
  gene symbol: GSN
  hgvsc: ENST00000373806.1:c.-188G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1495G>A
  hgvsp: ENSP00000362929.2:p.Gly499Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1519G>A
  hgvsp: ENSP00000445823.1:p.Gly507Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1495G>A
  hgvsp: ENSP00000409358.1:p.Gly499Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1528G>A
  hgvsp: ENSP00000377882.2:p.Gly510Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.841G>A
  hgvsp: ENSP00000362913.1:p.Gly281Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1495G>A
  hgvsp: ENSP00000340888.2:p.Gly499Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1495G>A
  hgvsp: ENSP00000416586.1:p.Gly499Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1648G>A
  hgvsp: ENSP00000362924.4:p.Gly550Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1528G>A
  hgvsp: ENSP00000411293.1:p.Gly510Ser
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12593
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly550Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

9-124088869-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088869
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088869
    reference: chr 9
allele count: 1
allele frequency: 9.378575581940615e-6
allele num: 106626
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1496G>T
  hgvsp: ENSP00000409358.1:p.Gly499Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1496G>T
  hgvsp: ENSP00000340888.2:p.Gly499Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1520G>T
  hgvsp: ENSP00000445823.1:p.Gly507Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1496G>T
  hgvsp: ENSP00000362914.2:p.Gly499Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1529G>T
  hgvsp: ENSP00000377882.2:p.Gly510Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.842G>T
  hgvsp: ENSP00000362913.1:p.Gly281Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1496G>T
  hgvsp: ENSP00000362929.2:p.Gly499Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1496G>T
  hgvsp: ENSP00000416586.1:p.Gly499Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1649G>T
  hgvsp: ENSP00000362924.4:p.Gly550Val
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362912
  ensembl transcript: ENST00000373806
  gene symbol: GSN
  hgvsc: ENST00000373806.1:c.-187G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1529G>T
  hgvsp: ENSP00000411293.1:p.Gly510Val
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1391
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19428
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly550Val
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

9-124088874-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088874
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088875
    reference: chr 9
allele count: 2
allele frequency: 1.913179896305649e-5
allele num: 104538
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1504dupC
  hgvsp: ENSP00000362929.2:p.Arg502ProfsTer28
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1657dupC
  hgvsp: ENSP00000362924.4:p.Arg553ProfsTer28
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1537dupC
  hgvsp: ENSP00000411293.1:p.Arg513ProfsTer28
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1504dupC
  hgvsp: ENSP00000340888.2:p.Arg502ProfsTer28
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1537dupC
  hgvsp: ENSP00000377882.2:p.Arg513ProfsTer28
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1504dupC
  hgvsp: ENSP00000362914.2:p.Arg502ProfsTer28
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1504dupC
  hgvsp: ENSP00000416586.1:p.Arg502ProfsTer28
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.850dupC
  hgvsp: ENSP00000362913.1:p.Arg284ProfsTer28
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1528dupC
  hgvsp: ENSP00000445823.1:p.Arg510ProfsTer28
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1504dupC
  hgvsp: ENSP00000409358.1:p.Arg502ProfsTer28
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362912
  ensembl transcript: ENST00000373806
  gene symbol: GSN
  hgvsc: ENST00000373806.1:c.-179dupC
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21787
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4618
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7095
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7550
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg553ProfsTer28
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

9-124088877-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088877
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088877
    reference: chr 9
allele count: 3
allele frequency: 2.937547735150696e-5
allele num: 102126
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1657C>T
  hgvsp: ENSP00000362924.4:p.Arg553Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1504C>T
  hgvsp: ENSP00000340888.2:p.Arg502Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.850C>T
  hgvsp: ENSP00000362913.1:p.Arg284Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1504C>T
  hgvsp: ENSP00000362929.2:p.Arg502Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1537C>T
  hgvsp: ENSP00000411293.1:p.Arg513Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1504C>T
  hgvsp: ENSP00000362914.2:p.Arg502Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1537C>T
  hgvsp: ENSP00000377882.2:p.Arg513Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1504C>T
  hgvsp: ENSP00000416586.1:p.Arg502Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1528C>T
  hgvsp: ENSP00000445823.1:p.Arg510Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1504C>T
  hgvsp: ENSP00000409358.1:p.Arg502Cys
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362912
  ensembl transcript: ENST00000373806
  gene symbol: GSN
  hgvsc: ENST00000373806.1:c.-179C>T
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8377
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7822
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23067
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4324
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7140
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg553Cys
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP

9-124088878-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088878
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088878
    reference: chr 9
allele count: 1
allele frequency: 1.000560313775714e-5
allele num: 99944
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.851G>A
  hgvsp: ENSP00000362913.1:p.Arg284His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1538G>A
  hgvsp: ENSP00000377882.2:p.Arg513His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1505G>A
  hgvsp: ENSP00000362914.2:p.Arg502His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1505G>A
  hgvsp: ENSP00000362929.2:p.Arg502His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1538G>A
  hgvsp: ENSP00000411293.1:p.Arg513His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1505G>A
  hgvsp: ENSP00000340888.2:p.Arg502His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362912
  ensembl transcript: ENST00000373806
  gene symbol: GSN
  hgvsc: ENST00000373806.1:c.-178G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1658G>A
  hgvsp: ENSP00000362924.4:p.Arg553His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1529G>A
  hgvsp: ENSP00000445823.1:p.Arg510His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1505G>A
  hgvsp: ENSP00000409358.1:p.Arg502His
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1505G>A
  hgvsp: ENSP00000416586.1:p.Arg502His
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8737
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg553His
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum

9-124088878-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088878
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088878
    reference: chr 9
allele count: 1
allele frequency: 1.000560313775714e-5
allele num: 99944
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1538G>T
  hgvsp: ENSP00000411293.1:p.Arg513Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1505G>T
  hgvsp: ENSP00000362929.2:p.Arg502Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362912
  ensembl transcript: ENST00000373806
  gene symbol: GSN
  hgvsc: ENST00000373806.1:c.-178G>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1529G>T
  hgvsp: ENSP00000445823.1:p.Arg510Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1505G>T
  hgvsp: ENSP00000409358.1:p.Arg502Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1658G>T
  hgvsp: ENSP00000362924.4:p.Arg553Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1505G>T
  hgvsp: ENSP00000340888.2:p.Arg502Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1505G>T
  hgvsp: ENSP00000362914.2:p.Arg502Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1505G>T
  hgvsp: ENSP00000416586.1:p.Arg502Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.851G>T
  hgvsp: ENSP00000362913.1:p.Arg284Leu
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1538G>T
  hgvsp: ENSP00000377882.2:p.Arg513Leu
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23514
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8737
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg553Leu
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP

9-124088879-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088879
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088879
    reference: chr 9
allele count: 1
allele frequency: 1.000440193685222e-5
allele num: 99956
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362912
  ensembl transcript: ENST00000373806
  gene symbol: GSN
  hgvsc: ENST00000373806.1:c.-177C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1539C>T
  hgvsp: ENST00000394353.2:c.1539C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1506C>T
  hgvsp: ENST00000449733.1:c.1506C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1539C>T
  hgvsp: ENST00000436847.1:c.1539C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1506C>T
  hgvsp: ENST00000412819.1:c.1506C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1506C>T
  hgvsp: ENST00000341272.2:c.1506C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1659C>T
  hgvsp: ENST00000373818.4:c.1659C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.852C>T
  hgvsp: ENST00000373807.1:c.852C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1506C>T
  hgvsp: ENST00000373808.2:c.1506C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1506C>T
  hgvsp: ENST00000373823.3:c.1506C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1530C>T
  hgvsp: ENST00000545652.1:c.1530C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8606
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23540
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6309
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg553Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD

9-124088883-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088883
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088883
    reference: chr 9
allele count: 3
allele frequency: 3.040314571214301e-5
allele num: 98674
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1510G>A
  hgvsp: ENSP00000362929.2:p.Gly504Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1543G>A
  hgvsp: ENSP00000377882.2:p.Gly515Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1534G>A
  hgvsp: ENSP00000445823.1:p.Gly512Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1510G>A
  hgvsp: ENSP00000409358.1:p.Gly504Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.856G>A
  hgvsp: ENSP00000362913.1:p.Gly286Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1510G>A
  hgvsp: ENSP00000416586.1:p.Gly504Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1510G>A
  hgvsp: ENSP00000362914.2:p.Gly504Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1510G>A
  hgvsp: ENSP00000340888.2:p.Gly504Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1543G>A
  hgvsp: ENSP00000411293.1:p.Gly515Ser
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362912
  ensembl transcript: ENST00000373806
  gene symbol: GSN
  hgvsc: ENST00000373806.1:c.-173G>A
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1663G>A
  hgvsp: ENSP00000362924.4:p.Gly555Ser
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1451
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8799
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23633
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Gly555Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

9-124088885-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 124088885
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 124088885
    reference: chr 9
allele count: 2
allele frequency: 2.080948912704193e-5
allele num: 96110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000411293
  ensembl transcript: ENST00000436847
  gene symbol: GSN
  hgvsc: ENST00000436847.1:c.1545C>T
  hgvsp: ENST00000436847.1:c.1545C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000340888
  ensembl transcript: ENST00000341272
  gene symbol: GSN
  hgvsc: ENST00000341272.2:c.1512C>T
  hgvsp: ENST00000341272.2:c.1512C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362924
  ensembl transcript: ENST00000373818
  gene symbol: GSN
  hgvsc: ENST00000373818.4:c.1665C>T
  hgvsp: ENST00000373818.4:c.1665C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362912
  ensembl transcript: ENST00000373806
  gene symbol: GSN
  hgvsc: ENST00000373806.1:c.-171C>T
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000445823
  ensembl transcript: ENST00000545652
  gene symbol: GSN
  hgvsc: ENST00000545652.1:c.1536C>T
  hgvsp: ENST00000545652.1:c.1536C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362913
  ensembl transcript: ENST00000373807
  gene symbol: GSN
  hgvsc: ENST00000373807.1:c.858C>T
  hgvsp: ENST00000373807.1:c.858C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362929
  ensembl transcript: ENST00000373823
  gene symbol: GSN
  hgvsc: ENST00000373823.3:c.1512C>T
  hgvsp: ENST00000373823.3:c.1512C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000409358
  ensembl transcript: ENST00000449733
  gene symbol: GSN
  hgvsc: ENST00000449733.1:c.1512C>T
  hgvsp: ENST00000449733.1:c.1512C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000362914
  ensembl transcript: ENST00000373808
  gene symbol: GSN
  hgvsc: ENST00000373808.2:c.1512C>T
  hgvsp: ENST00000373808.2:c.1512C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000416586
  ensembl transcript: ENST00000412819
  gene symbol: GSN
  hgvsc: ENST00000412819.1:c.1512C>T
  hgvsp: ENST00000412819.1:c.1512C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148180
  ensembl protein: ENSP00000377882
  ensembl transcript: ENST00000394353
  gene symbol: GSN
  hgvsc: ENST00000394353.2:c.1545C>T
  hgvsp: ENST00000394353.2:c.1545C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4620
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23579
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4657
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly555Gly
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8406
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2141
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18569
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5370
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14410
bin: 9.75e1
variant carriers: 319

GenotypeQuality
all individuals: 3579
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3462
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 1

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.732063858434314e-4
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.058770069675856e-4
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 25
allele frequency: 2.161507867888639e-3
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 9.086503513448025e-4
allele num: 16508
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 269
allele frequency: 4.033709213051823e-3
allele num: 66688
num of homozygotes: 1

QD
type: SiteQuality
SIO_000300: 3.082e1

DP
type: SiteQuality
SIO_000300: 2.266248e6

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.89e0

VQSLOD
type: SiteQuality
SIO_000300: 9.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

FS
type: SiteQuality
SIO_000300: 1.104e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.09e-1

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14132
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3606
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18630
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2155
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5405
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3487
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4537
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8441
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499610101373643e-5
allele num: 66684
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.981e1

FS
type: SiteQuality
SIO_000300: 4.73e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.255606e6

VQSLOD
type: SiteQuality
SIO_000300: 7.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.11e-1

QD
type: SiteQuality
SIO_000300: 1.369e1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3488
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5404
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3603
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18659
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14124
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8450
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923446816695518e-4
allele num: 10398
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.941e1

FS
type: SiteQuality
SIO_000300: 1.989e0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 1.588e1

DP
type: SiteQuality
SIO_000300: 2.254843e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.818e0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2155
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3599
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18660
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14115
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4531
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3486
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8403
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5402
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.04e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.668e0

QD
type: SiteQuality
SIO_000300: 8.9e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.29e0

VQSLOD
type: SiteQuality
SIO_000300: -1.267e0

DP
type: SiteQuality
SIO_000300: 2.253453e6

FS
type: SiteQuality
SIO_000300: 2.628e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.56e0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8163
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3539
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17704
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.503262078710802e-5
allele num: 66522
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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ReadPosRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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MQ
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MQRankSum
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QD
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InbreedingCoeff
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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allele frequency: 3.854307188282906e-4
allele num: 10378
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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FS
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DP
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MQ
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.517391959042313e-5
allele num: 66410
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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VQSLOD
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InbreedingCoeff
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MQRankSum
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FS
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ClippingRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 2.312138728323699e-4
allele num: 8650
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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ClippingRankSum
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BaseQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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MQ
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InbreedingCoeff
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FS
type: SiteQuality
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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allele count: 1
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allele num: 66348
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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Other
type: Population
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num of homozygotes: 0

Latino
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MQRankSum
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DP
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MQ
type: SiteQuality
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QD
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FS
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Latino
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South Asian
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Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66322
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MQ
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BaseQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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African
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Other
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South Asian
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European (Non-Finnish)
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Latino
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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FS
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MQRankSum
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DP
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QD
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MQ
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Latino
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Other
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African
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East Asian
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DP
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QD
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BaseQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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VQSLOD
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MQ
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66234
num of homozygotes: 0

South Asian
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allele frequency: 6.393044367727913e-5
allele num: 15642
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 3.08e0

QD
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InbreedingCoeff
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SIO_000300: 3.0e-4

DP
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FS
type: SiteQuality
SIO_000300: 1.71e0

ClippingRankSum
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SIO_000300: -8.120000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.824e0

VQSLOD
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SIO_000300: -1.059e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
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allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.693679720822024e-5
allele num: 10316
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66168
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.137512e6

MQRankSum
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BaseQRankSum
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SIO_000300: -2.825e0

QD
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MQ
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ClippingRankSum
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FS
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SIO_000300: 1.47e0

VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.17e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

African
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allele frequency: 3.668378576669112e-4
allele num: 2726
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7902
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 396
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
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MQRankSum
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SIO_000300: -3.58e-1

MQ
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SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: -8.740000000000001e-2

FS
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SIO_000300: 0.0e0

ClippingRankSum
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DP
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2714
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.265822784810127e-4
allele num: 7900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.45e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: -2.286e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.19e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.32e-1

QD
type: SiteQuality
SIO_000300: 1.45e1

DP
type: SiteQuality
SIO_000300: 5.73479e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.573e0

FS
type: SiteQuality
SIO_000300: 1.276e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.66e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.676470588235294e-4
allele num: 2720
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.006e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.46e-2

MQ
type: SiteQuality
SIO_000300: 5.893e1

VQSLOD
type: SiteQuality
SIO_000300: -1.173e0

FS
type: SiteQuality
SIO_000300: 1.931e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

DP
type: SiteQuality
SIO_000300: 5.95386e5

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7898
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.676470588235294e-4
allele num: 2720
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

East Asian
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MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 5.95386e5

QD
type: SiteQuality
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BaseQRankSum
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VQSLOD
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.46e-2

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.810000000000001e-2

ReadPosRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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DP
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MQ
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 8776
num of homozygotes: 0

South Asian
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African
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Latino
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Other
type: Population
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East Asian
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ClippingRankSum
type: SiteQuality
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MQ
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BaseQRankSum
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DP
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MQRankSum
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VQSLOD
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FS
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InbreedingCoeff
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2537
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.141031492469192e-4
allele num: 8764
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2726
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.215e0

QD
type: SiteQuality
SIO_000300: 4.99e0

VQSLOD
type: SiteQuality
SIO_000300: -1.782e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.950000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.8e-2

DP
type: SiteQuality
SIO_000300: 6.17531e5

GenotypeQuality
all individuals: 726
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.266143327424664e-4
allele num: 7898
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8752
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2716
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.16561e5

BaseQRankSum
type: SiteQuality
SIO_000300: 7.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.826e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.04e-2

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.67e-1

FS
type: SiteQuality
SIO_000300: 2.267e0

QD
type: SiteQuality
SIO_000300: 1.266e1

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2714
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.12e-2

MQ
type: SiteQuality
SIO_000300: 5.13e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.22e-1

DP
type: SiteQuality
SIO_000300: 6.10439e5

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

QD
type: SiteQuality
SIO_000300: 1.479e1

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 366
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variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7754
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.273885350318471e-4
allele num: 7850
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.766e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.42e-1

DP
type: SiteQuality
SIO_000300: 5.22228e5

MQRankSum
type: SiteQuality
SIO_000300: -5.19e-1

FS
type: SiteQuality
SIO_000300: 9.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.23e-2

QD
type: SiteQuality
SIO_000300: 1.263e1

GenotypeQuality
all individuals: 225
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
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variant carriers: 0

GenotypeQuality
all individuals: 159
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GenotypeQuality
all individuals: 335
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.304801670146138e-4
allele num: 7664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 532
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.37e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-2

FS
type: SiteQuality
SIO_000300: 9.525e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.462e0

MQ
type: SiteQuality
SIO_000300: 5.896e1

DP
type: SiteQuality
SIO_000300: 5.21246e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.38e-1

QD
type: SiteQuality
SIO_000300: 1.894e1

GenotypeQuality
all individuals: 5370
bin: 9.75e1
variant carriers: 21

GenotypeQuality
all individuals: 1263
bin: 6.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7850
num of homozygotes: 0

African
type: Population
allele count: 22
allele frequency: 8.842443729903537e-3
allele num: 2488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7846
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.84e0

VQSLOD
type: SiteQuality
SIO_000300: -1.421e0

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.294e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.140000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-2

DP
type: SiteQuality
SIO_000300: 5.23474e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.277139208173691e-4
allele num: 7830
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 36
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7850
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.97e-1

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.721e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 5.20593e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 1.277465508431272e-4
allele num: 7828
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2448
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 7668
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
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allele frequency: 0.0e0
allele num: 498
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Other
type: Population
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.27e0

InbreedingCoeff
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SIO_000300: 5.99e-2

MQ
type: SiteQuality
SIO_000300: 5.922e1

QD
type: SiteQuality
SIO_000300: 1.516e1

MQRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: 4.26e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 427
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7668
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 1.225490196078431e-3
allele num: 2448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.63e-1

FS
type: SiteQuality
SIO_000300: 8.27e0

DP
type: SiteQuality
SIO_000300: 5.08016e5

VQSLOD
type: SiteQuality
SIO_000300: -1.679e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.99e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.18e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.26e0

QD
type: SiteQuality
SIO_000300: 1.516e1

GenotypeQuality
all individuals: 1112
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 7.75e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5355
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6473
bin: 2.5e0
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2438
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.277139208173691e-4
allele num: 7830
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7660
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.199e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.51e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.33e-1

DP
type: SiteQuality
SIO_000300: 5.07964e5

FS
type: SiteQuality
SIO_000300: 1.536e1

QD
type: SiteQuality
SIO_000300: 1.455e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.159e0

GenotypeQuality
all individuals: 3006
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2288
bin: 2.25e1
variant carriers: 4

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 2

GenotypeQuality
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bin: 5.75e1
variant carriers: 5

GenotypeQuality
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bin: 9.25e1
variant carriers: 9

GenotypeQuality
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bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4800
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2472
bin: 7.25e1
variant carriers: 3

GenotypeQuality
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bin: 6.25e1
variant carriers: 3

GenotypeQuality
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bin: 8.25e1
variant carriers: 4

GenotypeQuality
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variant carriers: 4

GenotypeQuality
all individuals: 3369
bin: 7.75e1
variant carriers: 12

GenotypeQuality
all individuals: 537
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3806
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10708
bin: 9.75e1
variant carriers: 1591

Other
type: Population
allele count: 17
allele frequency: 2.014218009478673e-2
allele num: 844
num of homozygotes: 0

African
type: Population
allele count: 28
allele frequency: 2.828854314002829e-3
allele num: 9898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 868
allele frequency: 1.353922944938387e-2
allele num: 64110
num of homozygotes: 4

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8410
num of homozygotes: 0

Latino
type: Population
allele count: 66
allele frequency: 5.905511811023622e-3
allele num: 11176
num of homozygotes: 0

South Asian
type: Population
allele count: 637
allele frequency: 4.006793307334256e-2
allele num: 15898
num of homozygotes: 13

European (Finnish)
type: Population
allele count: 21
allele frequency: 3.671328671328671e-3
allele num: 5720
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.340000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

QD
type: SiteQuality
SIO_000300: 1.438e1

DP
type: SiteQuality
SIO_000300: 1.724437e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

VQSLOD
type: SiteQuality
SIO_000300: 4.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-2

GenotypeQuality
all individuals: 1648
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9649
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2480
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5759
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variant carriers: 0

GenotypeQuality
all individuals: 78
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GenotypeQuality
all individuals: 3016
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variant carriers: 0

GenotypeQuality
all individuals: 203
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variant carriers: 0

GenotypeQuality
all individuals: 2451
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4005
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variant carriers: 0

GenotypeQuality
all individuals: 194
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variant carriers: 0

GenotypeQuality
all individuals: 3481
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variant carriers: 0

GenotypeQuality
all individuals: 2619
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1558
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11180
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15926
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.047445992327882e-4
allele num: 9906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.556371786092262e-5
allele num: 64252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5732
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.846e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.606e0

VQSLOD
type: SiteQuality
SIO_000300: 3.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

DP
type: SiteQuality
SIO_000300: 1.744733e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.31e-1

QD
type: SiteQuality
SIO_000300: 1.385e1

GenotypeQuality
all individuals: 9755
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2629
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variant carriers: 0

GenotypeQuality
all individuals: 1192
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2567
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variant carriers: 0

GenotypeQuality
all individuals: 1438
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variant carriers: 0

GenotypeQuality
all individuals: 2802
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variant carriers: 0

GenotypeQuality
all individuals: 127
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variant carriers: 0

GenotypeQuality
all individuals: 189
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GenotypeQuality
all individuals: 3825
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GenotypeQuality
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GenotypeQuality
all individuals: 1741
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GenotypeQuality
all individuals: 2827
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variant carriers: 0

GenotypeQuality
all individuals: 1269
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variant carriers: 0

GenotypeQuality
all individuals: 2401
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6398
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.264879087833605e-5
allele num: 15962
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11234
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9954
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.647992067426872e-5
allele num: 64544
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-1

QD
type: SiteQuality
SIO_000300: 2.259e1

FS
type: SiteQuality
SIO_000300: 5.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.268e-1

DP
type: SiteQuality
SIO_000300: 1.799119e6

MQRankSum
type: SiteQuality
SIO_000300: 5.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.75e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2092
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2908
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
all individuals: 2907
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variant carriers: 0

GenotypeQuality
all individuals: 106
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variant carriers: 0

GenotypeQuality
all individuals: 428
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GenotypeQuality
all individuals: 6582
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variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
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variant carriers: 0

GenotypeQuality
all individuals: 3967
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variant carriers: 0

GenotypeQuality
all individuals: 269
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variant carriers: 0

GenotypeQuality
all individuals: 1249
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variant carriers: 0

GenotypeQuality
all individuals: 2280
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variant carriers: 0

GenotypeQuality
all individuals: 9772
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variant carriers: 1

GenotypeQuality
all individuals: 1306
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9986
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.547173314354674e-5
allele num: 64634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15990
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

FS
type: SiteQuality
SIO_000300: 1.285e0

MQRankSum
type: SiteQuality
SIO_000300: -5.3e-2

DP
type: SiteQuality
SIO_000300: 1.816641e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.913e1

QD
type: SiteQuality
SIO_000300: 1.09e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.67e-1

GenotypeQuality
all individuals: 118
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
all individuals: 21
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GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 9786
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variant carriers: 1

GenotypeQuality
all individuals: 268
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GenotypeQuality
all individuals: 2935
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GenotypeQuality
all individuals: 20933
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GenotypeQuality
all individuals: 1222
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GenotypeQuality
all individuals: 1818
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GenotypeQuality
all individuals: 3992
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GenotypeQuality
all individuals: 1995
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variant carriers: 0

GenotypeQuality
all individuals: 950
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variant carriers: 0

GenotypeQuality
all individuals: 6620
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variant carriers: 0

GenotypeQuality
all individuals: 2920
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1318
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.545881770962157e-5
allele num: 64688
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5784
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16000
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.879e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

DP
type: SiteQuality
SIO_000300: 1.820753e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.117e0

QD
type: SiteQuality
SIO_000300: 2.244e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.379999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.173e-1

GenotypeQuality
all individuals: 326
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2088
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6661
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GenotypeQuality
all individuals: 1191
bin: 2.75e1
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GenotypeQuality
all individuals: 1872
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GenotypeQuality
all individuals: 712
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GenotypeQuality
all individuals: 106
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variant carriers: 0

GenotypeQuality
all individuals: 114
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GenotypeQuality
all individuals: 76
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GenotypeQuality
all individuals: 882
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 504
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GenotypeQuality
all individuals: 9791
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.179801793298726e-4
allele num: 8476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5778
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11252
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16010
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.418e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

MQRankSum
type: SiteQuality
SIO_000300: 7.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.53e-1

QD
type: SiteQuality
SIO_000300: 9.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

DP
type: SiteQuality
SIO_000300: 1.824868e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.76e0

GenotypeQuality
all individuals: 1361
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 4.25e1
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GenotypeQuality
all individuals: 6801
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variant carriers: 0

GenotypeQuality
all individuals: 1686
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1151
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2117
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GenotypeQuality
all individuals: 20711
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variant carriers: 0

GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 3028
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GenotypeQuality
all individuals: 9804
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variant carriers: 1

GenotypeQuality
all individuals: 80
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GenotypeQuality
all individuals: 4121
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GenotypeQuality
all individuals: 1857
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variant carriers: 0

GenotypeQuality
all individuals: 3008
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11262
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9994
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16006
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.544306143249838e-5
allele num: 64754
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.09e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.146e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

QD
type: SiteQuality
SIO_000300: 3.02e0

DP
type: SiteQuality
SIO_000300: 1.83337e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e-1

GenotypeQuality
all individuals: 518
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1943
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21979
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 3117
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7025
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variant carriers: 0

GenotypeQuality
all individuals: 9865
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variant carriers: 1

GenotypeQuality
all individuals: 445
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16052
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10046
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538603563405853e-5
allele num: 64994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5842
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.198e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
SIO_000300: 1.008e1

DP
type: SiteQuality
SIO_000300: 1.857362e6

MQRankSum
type: SiteQuality
SIO_000300: 9.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 1.713e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e0

VQSLOD
type: SiteQuality
SIO_000300: 8.93e-1

GenotypeQuality
all individuals: 1302
bin: 5.25e1
variant carriers: 1287

GenotypeQuality
all individuals: 2150
bin: 6.75e1
variant carriers: 2032

GenotypeQuality
all individuals: 245
bin: 2.75e1
variant carriers: 231

GenotypeQuality
all individuals: 644
bin: 3.75e1
variant carriers: 621

GenotypeQuality
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bin: 2.5e0
variant carriers: 27

GenotypeQuality
all individuals: 802
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variant carriers: 788

GenotypeQuality
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variant carriers: 36

GenotypeQuality
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variant carriers: 409

GenotypeQuality
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variant carriers: 454

GenotypeQuality
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variant carriers: 1622

GenotypeQuality
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variant carriers: 1228

GenotypeQuality
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variant carriers: 40101

GenotypeQuality
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variant carriers: 2748

GenotypeQuality
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variant carriers: 2374

GenotypeQuality
all individuals: 2732
bin: 9.25e1
variant carriers: 2724

GenotypeQuality
all individuals: 964
bin: 4.75e1
variant carriers: 953

European (Non-Finnish)
type: Population
allele count: 54552
allele frequency: 8.264202393576731e-1
allele num: 66010
num of homozygotes: 22485

African
type: Population
allele count: 9047
allele frequency: 8.781789943700252e-1
allele num: 10302
num of homozygotes: 3977

Other
type: Population
allele count: 772
allele frequency: 8.772727272727273e-1
allele num: 880
num of homozygotes: 337

East Asian
type: Population
allele count: 8544
allele frequency: 9.914133209561383e-1
allele num: 8618
num of homozygotes: 4236

European (Finnish)
type: Population
allele count: 5601
allele frequency: 8.913112667091024e-1
allele num: 6284
num of homozygotes: 2493

South Asian
type: Population
allele count: 15186
allele frequency: 9.255241345685031e-1
allele num: 16408
num of homozygotes: 7045

Latino
type: Population
allele count: 10578
allele frequency: 9.193464279506345e-1
allele num: 11506
num of homozygotes: 4869

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

FS
type: SiteQuality
SIO_000300: 1.329e0

QD
type: SiteQuality
SIO_000300: 2.988e1

DP
type: SiteQuality
SIO_000300: 2.681667e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

VQSLOD
type: SiteQuality
SIO_000300: 4.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-2

GenotypeQuality
all individuals: 516
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
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variant carriers: 0

GenotypeQuality
all individuals: 465
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 26
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GenotypeQuality
all individuals: 1860
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GenotypeQuality
all individuals: 977
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variant carriers: 0

GenotypeQuality
all individuals: 602
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variant carriers: 0

GenotypeQuality
all individuals: 54
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variant carriers: 0

GenotypeQuality
all individuals: 1261
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variant carriers: 0

GenotypeQuality
all individuals: 7912
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GenotypeQuality
all individuals: 1169
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517266492686776e-5
allele num: 65908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.894283476898982e-4
allele num: 10216
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16336
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6192
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.775353e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.99e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.62e-1

QD
type: SiteQuality
SIO_000300: 1.443e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 3.642e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.25e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

GenotypeQuality
all individuals: 499
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36739
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variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 40
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GenotypeQuality
all individuals: 408
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GenotypeQuality
all individuals: 88
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variant carriers: 0

GenotypeQuality
all individuals: 666
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GenotypeQuality
all individuals: 926
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GenotypeQuality
all individuals: 603
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variant carriers: 0

GenotypeQuality
all individuals: 444
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variant carriers: 0

GenotypeQuality
all individuals: 501
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GenotypeQuality
all individuals: 4640
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variant carriers: 1

GenotypeQuality
all individuals: 7871
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variant carriers: 0

GenotypeQuality
all individuals: 1294
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variant carriers: 0

GenotypeQuality
all individuals: 985
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variant carriers: 0

GenotypeQuality
all individuals: 959
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.120700208103807e-5
allele num: 16338
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65956
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6194
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.580000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.057e0

DP
type: SiteQuality
SIO_000300: 1.774904e6

FS
type: SiteQuality
SIO_000300: 5.924e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.079e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 2.341e1

GenotypeDepth
all individuals: 212
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
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variant carriers: 0

GenotypeQuality
all individuals: 400
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variant carriers: 0

GenotypeQuality
all individuals: 7761
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variant carriers: 0

GenotypeQuality
all individuals: 45
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GenotypeQuality
all individuals: 4592
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 39497
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 399
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GenotypeQuality
all individuals: 472
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GenotypeQuality
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GenotypeQuality
all individuals: 315
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GenotypeQuality
all individuals: 30
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variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 781
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GenotypeQuality
all individuals: 121
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GenotypeQuality
all individuals: 1722
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variant carriers: 0

GenotypeQuality
all individuals: 1572
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variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16326
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.746114894360049e-4
allele num: 11454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.033704456511847e-5
allele num: 65926
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

QD
type: SiteQuality
SIO_000300: 9.67e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.52e0

VQSLOD
type: SiteQuality
SIO_000300: 8.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.7e-2

FS
type: SiteQuality
SIO_000300: 6.87e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.33e-1

DP
type: SiteQuality
SIO_000300: 1.780752e6

GenotypeQuality
all individuals: 1550
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 334
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variant carriers: 0

GenotypeQuality
all individuals: 414
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variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6182
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.367575122292103e-4
allele num: 11448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.12369871402327e-5
allele num: 16330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.27e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

QD
type: SiteQuality
SIO_000300: 1.279e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

FS
type: SiteQuality
SIO_000300: 3.428e0

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.33e-1

DP
type: SiteQuality
SIO_000300: 1.783154e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 12
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 39921
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.786651008025054e-5
allele num: 10218
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 3.337884994689729e-4
allele num: 65910
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.617599482368166e-4
allele num: 6182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.733624454148471e-5
allele num: 11450
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16332
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.131e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.945e1

FS
type: SiteQuality
SIO_000300: 5.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.55e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e-1

DP
type: SiteQuality
SIO_000300: 1.784185e6

GenotypeQuality
all individuals: 1435
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 28
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 294
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GenotypeQuality
all individuals: 4562
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GenotypeQuality
all individuals: 26
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 44
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GenotypeQuality
all individuals: 221
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7726
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10208
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.298000929800093e-4
allele num: 8604
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.37e-1

FS
type: SiteQuality
SIO_000300: 6.599e0

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.15e-2

MQ
type: SiteQuality
SIO_000300: 5.933e1

QD
type: SiteQuality
SIO_000300: 9.52e0

DP
type: SiteQuality
SIO_000300: 1.783572e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.366e0

VQSLOD
type: SiteQuality
SIO_000300: -4.889e-1

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 40438
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.625590757920532e-4
allele num: 11426
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65862
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.785309e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 1.236e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.15e-1

QD
type: SiteQuality
SIO_000300: 1.002e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65862
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.614465611882467e-4
allele num: 6194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.236e0

QD
type: SiteQuality
SIO_000300: 1.002e1

DP
type: SiteQuality
SIO_000300: 1.785309e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

VQSLOD
type: SiteQuality
SIO_000300: 3.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.56e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1599
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GenotypeQuality
all individuals: 4544
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521005080156968e-5
allele num: 65746
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

DP
type: SiteQuality
SIO_000300: 1.784269e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.28e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

QD
type: SiteQuality
SIO_000300: 1.061e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.34e-1

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
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variant carriers: 0

GenotypeQuality
all individuals: 7569
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variant carriers: 0

GenotypeQuality
all individuals: 160
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GenotypeQuality
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GenotypeQuality
all individuals: 143
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GenotypeQuality
all individuals: 30
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 349
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variant carriers: 0

GenotypeQuality
all individuals: 4544
bin: 9.75e1
variant carriers: 13

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.084020320627871e-5
allele num: 65746
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.149010477299185e-4
allele num: 8590
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.228048630725777e-4
allele num: 16286
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.99e0

MQRankSum
type: SiteQuality
SIO_000300: 1.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.34e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.28e-1

QD
type: SiteQuality
SIO_000300: 1.061e1

DP
type: SiteQuality
SIO_000300: 1.784269e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6182
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.315323707498836e-4
allele num: 8588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520958812435359e-5
allele num: 65748
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.951e1

VQSLOD
type: SiteQuality
SIO_000300: 9.6e-1

MQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.74e-1

QD
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SIO_000300: 1.11e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.7e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 700
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6170
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.807468733485996e-5
allele num: 11354
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16200
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.527277170260859e-5
allele num: 65476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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FS
type: SiteQuality
SIO_000300: 2.664e0

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.77349e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6162
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10030
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.073518564052127e-5
allele num: 65072
num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.009e1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: 6.04e-1

FS
type: SiteQuality
SIO_000300: 5.262e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 1.755245e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.21e-1

GenotypeQuality
all individuals: 491
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 9.25e1
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GenotypeQuality
all individuals: 3428
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1290
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4502
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 187
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 649
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39359
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53888769197624e-5
allele num: 64982
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10014
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16092
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.57e-1

QD
type: SiteQuality
SIO_000300: 2.71e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.752493e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.16e0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.15e-1

GenotypeQuality
all individuals: 115
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.25e1
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GenotypeQuality
all individuals: 217
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GenotypeQuality
all individuals: 38142
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variant carriers: 0

GenotypeQuality
all individuals: 295
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GenotypeQuality
all individuals: 584
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GenotypeQuality
all individuals: 6967
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variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1318
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9926
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.93016610108948e-5
allele num: 11198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6112
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16012
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.1e-2

DP
type: SiteQuality
SIO_000300: 1.729099e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.193e1

QD
type: SiteQuality
SIO_000300: 2.91e0

MQRankSum
type: SiteQuality
SIO_000300: -3.072e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
all individuals: 51
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6748
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 999
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5731
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variant carriers: 0

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 36953
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 562
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variant carriers: 0

GenotypeQuality
all individuals: 285
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variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1254
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4485
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 405
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15958
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.235969069593415e-5
allele num: 64144
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6078
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11134
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 4.467e0

VQSLOD
type: SiteQuality
SIO_000300: 6.870000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.620000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.43e-1

DP
type: SiteQuality
SIO_000300: 1.708729e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

QD
type: SiteQuality
SIO_000300: 1.018e1

GenotypeQuality
all individuals: 193
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6111
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
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variant carriers: 0

GenotypeQuality
all individuals: 265
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variant carriers: 0

GenotypeQuality
all individuals: 1505
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1118
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1715
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32371
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 925
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variant carriers: 0

GenotypeQuality
all individuals: 515
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variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4476
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9382
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5980
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9704
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591241805104704e-5
allele num: 62844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10946
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQRankSum
type: SiteQuality
SIO_000300: -1.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.63e-1

QD
type: SiteQuality
SIO_000300: 1.722e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.633918e6

GenotypeQuality
all individuals: 240
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 237
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variant carriers: 0

GenotypeQuality
all individuals: 30742
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1939
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variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 275
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variant carriers: 0

GenotypeQuality
all individuals: 351
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GenotypeQuality
all individuals: 805
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5893
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10459
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 889
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1097
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4493
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 390
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 21
allele frequency: 2.547925260859015e-3
allele num: 8242
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5958
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.176470588235294e-3
allele num: 850
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62400
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.44e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.17e-1

QD
type: SiteQuality
SIO_000300: 1.269e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.009e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.609621e6

GenotypeDepth
all individuals: 19265
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 267
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2326
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variant carriers: 0

GenotypeQuality
all individuals: 28179
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
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GenotypeQuality
all individuals: 251
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variant carriers: 0

GenotypeQuality
all individuals: 497
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GenotypeQuality
all individuals: 2040
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 2.5e0
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GenotypeQuality
all individuals: 5660
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1070
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 961
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12152
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4495
bin: 9.75e1
variant carriers: 48

GenotypeQuality
all individuals: 270
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 48
allele frequency: 7.758202683045095e-4
allele num: 61870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.46e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e0

MQRankSum
type: SiteQuality
SIO_000300: 3.07e-1

DP
type: SiteQuality
SIO_000300: 1.567858e6

QD
type: SiteQuality
SIO_000300: 1.297e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

GenotypeDepth
all individuals: 344
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 996
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2813
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3140
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5119
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variant carriers: 0

GenotypeQuality
all individuals: 267
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GenotypeQuality
all individuals: 364
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variant carriers: 0

GenotypeQuality
all individuals: 811
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GenotypeQuality
all individuals: 476
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variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.5e0
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GenotypeQuality
all individuals: 15368
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1242
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23762
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4469
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.648804616652927e-5
allele num: 60650
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7990
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15518
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.113e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.121e0

QD
type: SiteQuality
SIO_000300: 1.257e1

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

DP
type: SiteQuality
SIO_000300: 1.47894e6

VQSLOD
type: SiteQuality
SIO_000300: 2.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeDepth
all individuals: 119
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 534
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GenotypeQuality
all individuals: 1794
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variant carriers: 0

GenotypeQuality
all individuals: 409
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variant carriers: 0

GenotypeQuality
all individuals: 18920
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variant carriers: 0

GenotypeQuality
all individuals: 621
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GenotypeQuality
all individuals: 700
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GenotypeQuality
all individuals: 3816
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variant carriers: 0

GenotypeQuality
all individuals: 4353
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3377
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4469
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 434
bin: 8.25e1
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GenotypeQuality
all individuals: 812
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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European (Finnish)
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Latino
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African
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South Asian
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allele num: 15328
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European (Non-Finnish)
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allele frequency: 1.694111269228163e-5
allele num: 59028
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MQ
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DP
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QD
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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SIO_000300: 7.25e-1

FS
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ClippingRankSum
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SIO_000300: 9.96e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Latino
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European (Non-Finnish)
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Other
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East Asian
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DP
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MQ
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BaseQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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East Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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African
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BaseQRankSum
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FS
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MQ
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQRankSum
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DP
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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African
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Other
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MQRankSum
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FS
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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DP
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MQ
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VQSLOD
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Finnish)
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Latino
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South Asian
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East Asian
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European (Non-Finnish)
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ReadPosRankSum
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FS
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ClippingRankSum
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MQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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BaseQRankSum
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MQ
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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South Asian
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African
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European (Non-Finnish)
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East Asian
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Other
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MQ
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ClippingRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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FS
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MQRankSum
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DP
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VQSLOD
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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European (Finnish)
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Other
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Latino
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European (Non-Finnish)
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East Asian
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ReadPosRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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MQ
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14884
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.53e-1

DP
type: SiteQuality
SIO_000300: 1.160942e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.46e-1

QD
type: SiteQuality
SIO_000300: 1.048e1

GenotypeDepth
all individuals: 1857
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6314
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2744
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8149
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5775
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23556
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4454
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1417
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2200
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52982
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.022653721682848e-4
allele num: 14832
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7164
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5248
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.25e-1

DP
type: SiteQuality
SIO_000300: 1.133158e6

QD
type: SiteQuality
SIO_000300: 1.218e1

FS
type: SiteQuality
SIO_000300: 1.9067e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.565e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.038e0