7-114066635-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066635
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066635
    reference: chr 7
allele count: 1
allele frequency: 8.2917364554485e-6
allele num: 120602
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.69A>G
  hgvsp: ENST00000403559.4:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.69A>G
  hgvsp: ENST00000378237.3:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.69A>G
  hgvsp: ENST00000350908.4:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.69A>G
  hgvsp: ENST00000360232.4:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.220A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.69A>G
  hgvsp: ENST00000393495.3:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-266A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-266A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.69A>G
  hgvsp: ENST00000440349.1:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.69A>G
  hgvsp: ENST00000393498.2:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.69A>G
  hgvsp: ENST00000412402.1:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.69A>G
  hgvsp: ENST00000441290.2:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.69A>G
  hgvsp: ENST00000393494.2:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.69A>G
  hgvsp: ENST00000408937.3:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.69A>G
  hgvsp: ENST00000462331.1:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.69A>G
  hgvsp: ENST00000452963.2:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.66A>G
  hgvsp: ENST00000390668.3:c.66A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu23Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP

7-114066636-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066636
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066636
    reference: chr 7
allele count: 10
allele frequency: 8.291873963515754e-5
allele num: 120600
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.70A>G
  hgvsp: ENSP00000377132.2:p.Ser24Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.70A>G
  hgvsp: ENSP00000386200.3:p.Ser24Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.70A>G
  hgvsp: ENSP00000265436.7:p.Ser24Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.70A>G
  hgvsp: ENSP00000377135.2:p.Ser24Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.67A>G
  hgvsp: ENSP00000375084.3:p.Ser23Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.221A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-265A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.70A>G
  hgvsp: ENSP00000377133.3:p.Ser24Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.70A>G
  hgvsp: ENSP00000416825.1:p.Ser24Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.70A>G
  hgvsp: ENSP00000353367.4:p.Ser24Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.70A>G
  hgvsp: ENSP00000385069.4:p.Ser24Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.70A>G
  hgvsp: ENSP00000395552.1:p.Ser24Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.70A>G
  hgvsp: ENSP00000409826.2:p.Ser24Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.70A>G
  hgvsp: ENSP00000405470.1:p.Ser24Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-265A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.70A>G
  hgvsp: ENSP00000367482.3:p.Ser24Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.70A>G
  hgvsp: ENSP00000418100.1:p.Ser24Gly
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser24Gly
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/7-114066649-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066649
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066649
    reference: chr 7
allele count: 1
allele frequency: 8.29242404139578e-6
allele num: 120592
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-252A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.83A>C
  hgvsp: ENSP00000265436.7:p.Asp28Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.80A>C
  hgvsp: ENSP00000375084.3:p.Asp27Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.83A>C
  hgvsp: ENSP00000418100.1:p.Asp28Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.83A>C
  hgvsp: ENSP00000353367.4:p.Asp28Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.83A>C
  hgvsp: ENSP00000367482.3:p.Asp28Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.83A>C
  hgvsp: ENSP00000395552.1:p.Asp28Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.83A>C
  hgvsp: ENSP00000386200.3:p.Asp28Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.83A>C
  hgvsp: ENSP00000416825.1:p.Asp28Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.234A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.83A>C
  hgvsp: ENSP00000377132.2:p.Asp28Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.83A>C
  hgvsp: ENSP00000385069.4:p.Asp28Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.83A>C
  hgvsp: ENSP00000377133.3:p.Asp28Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.83A>C
  hgvsp: ENSP00000409826.2:p.Asp28Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.83A>C
  hgvsp: ENSP00000405470.1:p.Asp28Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.83A>C
  hgvsp: ENSP00000377135.2:p.Asp28Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-252A>C
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6403
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp28Ala
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

7-114066650-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066650
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066650
    reference: chr 7
allele count: 1
allele frequency: 8.292699107705576e-6
allele num: 120588
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.84T>C
  hgvsp: ENST00000403559.4:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.84T>C
  hgvsp: ENST00000393494.2:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.84T>C
  hgvsp: ENST00000441290.2:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.84T>C
  hgvsp: ENST00000412402.1:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.84T>C
  hgvsp: ENST00000452963.2:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.84T>C
  hgvsp: ENST00000440349.1:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.84T>C
  hgvsp: ENST00000360232.4:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.84T>C
  hgvsp: ENST00000408937.3:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-251T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.84T>C
  hgvsp: ENST00000393498.2:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.84T>C
  hgvsp: ENST00000393495.3:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-251T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.84T>C
  hgvsp: ENST00000350908.4:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.84T>C
  hgvsp: ENST00000462331.1:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.81T>C
  hgvsp: ENST00000390668.3:c.81T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.235T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.84T>C
  hgvsp: ENST00000378237.3:c.84T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6404
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp28Asp
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP

7-114066657-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066657
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066657
    reference: chr 7
allele count: 1
allele frequency: 8.29242404139578e-6
allele num: 120592
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.91A>G
  hgvsp: ENSP00000377132.2:p.Ser31Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.91A>G
  hgvsp: ENSP00000377133.3:p.Ser31Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.91A>G
  hgvsp: ENSP00000353367.4:p.Ser31Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.91A>G
  hgvsp: ENSP00000405470.1:p.Ser31Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.91A>G
  hgvsp: ENSP00000386200.3:p.Ser31Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.242A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.91A>G
  hgvsp: ENSP00000385069.4:p.Ser31Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.91A>G
  hgvsp: ENSP00000265436.7:p.Ser31Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.91A>G
  hgvsp: ENSP00000377135.2:p.Ser31Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-244A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.91A>G
  hgvsp: ENSP00000416825.1:p.Ser31Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.91A>G
  hgvsp: ENSP00000418100.1:p.Ser31Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.91A>G
  hgvsp: ENSP00000409826.2:p.Ser31Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.91A>G
  hgvsp: ENSP00000367482.3:p.Ser31Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.91A>G
  hgvsp: ENSP00000395552.1:p.Ser31Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.88A>G
  hgvsp: ENSP00000375084.3:p.Ser30Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-244A>G
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24436
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser31Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS

7-114066658-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066658
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066658
    reference: chr 7
allele count: 1
allele frequency: 8.294349888855711e-6
allele num: 120564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.92G>A
  hgvsp: ENSP00000416825.1:p.Ser31Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.92G>A
  hgvsp: ENSP00000385069.4:p.Ser31Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-243G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.92G>A
  hgvsp: ENSP00000265436.7:p.Ser31Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.92G>A
  hgvsp: ENSP00000405470.1:p.Ser31Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.92G>A
  hgvsp: ENSP00000409826.2:p.Ser31Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.92G>A
  hgvsp: ENSP00000377132.2:p.Ser31Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.92G>A
  hgvsp: ENSP00000367482.3:p.Ser31Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.92G>A
  hgvsp: ENSP00000353367.4:p.Ser31Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.92G>A
  hgvsp: ENSP00000377133.3:p.Ser31Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.92G>A
  hgvsp: ENSP00000418100.1:p.Ser31Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-243G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.92G>A
  hgvsp: ENSP00000386200.3:p.Ser31Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.92G>A
  hgvsp: ENSP00000377135.2:p.Ser31Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.89G>A
  hgvsp: ENSP00000375084.3:p.Ser30Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.92G>A
  hgvsp: ENSP00000395552.1:p.Ser31Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.243G>A
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser31Asn
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

7-114066662-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066662
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066662
    reference: chr 7
allele count: 1
allele frequency: 8.2936619835122e-6
allele num: 120574
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.96A>G
  hgvsp: ENST00000393498.2:c.96A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.96A>G
  hgvsp: ENST00000452963.2:c.96A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.96A>G
  hgvsp: ENST00000462331.1:c.96A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.96A>G
  hgvsp: ENST00000378237.3:c.96A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-239A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.247A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.93A>G
  hgvsp: ENST00000390668.3:c.93A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.96A>G
  hgvsp: ENST00000393494.2:c.96A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.96A>G
  hgvsp: ENST00000441290.2:c.96A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.96A>G
  hgvsp: ENST00000408937.3:c.96A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.96A>G
  hgvsp: ENST00000403559.4:c.96A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.96A>G
  hgvsp: ENST00000360232.4:c.96A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.96A>G
  hgvsp: ENST00000393495.3:c.96A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.96A>G
  hgvsp: ENST00000350908.4:c.96A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.96A>G
  hgvsp: ENST00000440349.1:c.96A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.96A>G
  hgvsp: ENST00000412402.1:c.96A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-239A>G
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg32Arg
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

7-114066672-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066672
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066672
    reference: chr 7
allele count: 1
allele frequency: 8.298341991270144e-6
allele num: 120506
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.106T>C
  hgvsp: ENSP00000377133.3:p.Ser36Pro
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.106T>C
  hgvsp: ENSP00000395552.1:p.Ser36Pro
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.106T>C
  hgvsp: ENSP00000353367.4:p.Ser36Pro
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.103T>C
  hgvsp: ENSP00000375084.3:p.Ser35Pro
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-229T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-229T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.106T>C
  hgvsp: ENSP00000386200.3:p.Ser36Pro
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.106T>C
  hgvsp: ENSP00000377132.2:p.Ser36Pro
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.106T>C
  hgvsp: ENSP00000416825.1:p.Ser36Pro
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.257T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.106T>C
  hgvsp: ENSP00000367482.3:p.Ser36Pro
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.106T>C
  hgvsp: ENSP00000418100.1:p.Ser36Pro
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.106T>C
  hgvsp: ENSP00000265436.7:p.Ser36Pro
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.106T>C
  hgvsp: ENSP00000385069.4:p.Ser36Pro
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.106T>C
  hgvsp: ENSP00000409826.2:p.Ser36Pro
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.106T>C
  hgvsp: ENSP00000377135.2:p.Ser36Pro
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.106T>C
  hgvsp: ENSP00000405470.1:p.Ser36Pro
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser36Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

7-114066679-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066679
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066679
    reference: chr 7
allele count: 1
allele frequency: 8.302200083022e-6
allele num: 120450
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-222G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.113G>A
  hgvsp: ENSP00000377133.3:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.113G>A
  hgvsp: ENSP00000385069.4:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.110G>A
  hgvsp: ENSP00000375084.3:p.Gly37Asp
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.113G>A
  hgvsp: ENSP00000395552.1:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.113G>A
  hgvsp: ENSP00000409826.2:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.113G>A
  hgvsp: ENSP00000377132.2:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.113G>A
  hgvsp: ENSP00000386200.3:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.113G>A
  hgvsp: ENSP00000377135.2:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.113G>A
  hgvsp: ENSP00000353367.4:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-222G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.113G>A
  hgvsp: ENSP00000418100.1:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.113G>A
  hgvsp: ENSP00000367482.3:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.113G>A
  hgvsp: ENSP00000265436.7:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.264G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.113G>A
  hgvsp: ENSP00000416825.1:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.113G>A
  hgvsp: ENSP00000405470.1:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly38Asp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

7-114066687-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066687
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066687
    reference: chr 7
allele count: 1
allele frequency: 8.305509875251242e-6
allele num: 120402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.121A>G
  hgvsp: ENSP00000395552.1:p.Ser41Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-214A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.121A>G
  hgvsp: ENSP00000353367.4:p.Ser41Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.121A>G
  hgvsp: ENSP00000377133.3:p.Ser41Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.121A>G
  hgvsp: ENSP00000377132.2:p.Ser41Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.121A>G
  hgvsp: ENSP00000367482.3:p.Ser41Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.118A>G
  hgvsp: ENSP00000375084.3:p.Ser40Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.121A>G
  hgvsp: ENSP00000416825.1:p.Ser41Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.121A>G
  hgvsp: ENSP00000265436.7:p.Ser41Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.121A>G
  hgvsp: ENSP00000418100.1:p.Ser41Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.121A>G
  hgvsp: ENSP00000409826.2:p.Ser41Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.121A>G
  hgvsp: ENSP00000385069.4:p.Ser41Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.121A>G
  hgvsp: ENSP00000386200.3:p.Ser41Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.121A>G
  hgvsp: ENSP00000405470.1:p.Ser41Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.272A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-214A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.121A>G
  hgvsp: ENSP00000377135.2:p.Ser41Gly
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser41Gly
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP

7-114066691-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066691
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066691
    reference: chr 7
allele count: 1
allele frequency: 8.30813199960121e-6
allele num: 120364
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.125C>G
  hgvsp: ENSP00000405470.1:p.Ser42Cys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.125C>G
  hgvsp: ENSP00000418100.1:p.Ser42Cys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.125C>G
  hgvsp: ENSP00000377135.2:p.Ser42Cys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.125C>G
  hgvsp: ENSP00000353367.4:p.Ser42Cys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.125C>G
  hgvsp: ENSP00000386200.3:p.Ser42Cys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.125C>G
  hgvsp: ENSP00000395552.1:p.Ser42Cys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.125C>G
  hgvsp: ENSP00000409826.2:p.Ser42Cys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-210C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.125C>G
  hgvsp: ENSP00000377133.3:p.Ser42Cys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.276C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.125C>G
  hgvsp: ENSP00000377132.2:p.Ser42Cys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.125C>G
  hgvsp: ENSP00000416825.1:p.Ser42Cys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.125C>G
  hgvsp: ENSP00000265436.7:p.Ser42Cys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.125C>G
  hgvsp: ENSP00000385069.4:p.Ser42Cys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.122C>G
  hgvsp: ENSP00000375084.3:p.Ser41Cys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-210C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.125C>G
  hgvsp: ENSP00000367482.3:p.Ser42Cys
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser42Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

7-114066700-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066700
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066700
    reference: chr 7
allele count: 1
allele frequency: 8.312275568559649e-6
allele num: 120304
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.134G>C
  hgvsp: ENSP00000265436.7:p.Ser45Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.134G>C
  hgvsp: ENSP00000416825.1:p.Ser45Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-201G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.134G>C
  hgvsp: ENSP00000409826.2:p.Ser45Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.134G>C
  hgvsp: ENSP00000377133.3:p.Ser45Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.134G>C
  hgvsp: ENSP00000353367.4:p.Ser45Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.134G>C
  hgvsp: ENSP00000386200.3:p.Ser45Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.134G>C
  hgvsp: ENSP00000418100.1:p.Ser45Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.131G>C
  hgvsp: ENSP00000375084.3:p.Ser44Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.134G>C
  hgvsp: ENSP00000377135.2:p.Ser45Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.285G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.134G>C
  hgvsp: ENSP00000395552.1:p.Ser45Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.134G>C
  hgvsp: ENSP00000367482.3:p.Ser45Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.134G>C
  hgvsp: ENSP00000377132.2:p.Ser45Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.134G>C
  hgvsp: ENSP00000385069.4:p.Ser45Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-201G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.134G>C
  hgvsp: ENSP00000405470.1:p.Ser45Thr
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser45Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

7-114066708-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066708
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066708
    reference: chr 7
allele count: 2
allele frequency: 1.664059639897494e-5
allele num: 120188
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.142G>A
  hgvsp: ENSP00000418100.1:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-193G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.142G>A
  hgvsp: ENSP00000385069.4:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.142G>A
  hgvsp: ENSP00000409826.2:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.142G>A
  hgvsp: ENSP00000386200.3:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.142G>A
  hgvsp: ENSP00000265436.7:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.142G>A
  hgvsp: ENSP00000395552.1:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.142G>A
  hgvsp: ENSP00000416825.1:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.142G>A
  hgvsp: ENSP00000377133.3:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.142G>A
  hgvsp: ENSP00000367482.3:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.142G>A
  hgvsp: ENSP00000405470.1:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.142G>A
  hgvsp: ENSP00000377132.2:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.142G>A
  hgvsp: ENSP00000377135.2:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.142G>A
  hgvsp: ENSP00000353367.4:p.Glu48Lys
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.293G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-193G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.139G>A
  hgvsp: ENSP00000375084.3:p.Glu47Lys
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu48Lys
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

7-114066744-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066744
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066744
    reference: chr 7
allele count: 1
allele frequency: 8.641996646905302e-6
allele num: 115714
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-167+10G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.168+10G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.168+10G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.168+10G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.319+10G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.168+10G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.168+10G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.168+10G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.168+10G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.168+10G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.165+10G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-167+10G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.168+10G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.168+10G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.168+10G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.168+10G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.168+10G>C
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff

7-114066751-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066751
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066751
    reference: chr 7
allele count: 1
allele frequency: 8.763934656103204e-6
allele num: 114104
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.168+17T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.319+17T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.168+17T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-167+17T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.168+17T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.165+17T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.168+17T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.168+17T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.168+17T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.168+17T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-167+17T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.168+17T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.168+17T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.168+17T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.168+17T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.168+17T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.168+17T>G
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

7-114066753-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066753
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066753
    reference: chr 7
allele count: 1
allele frequency: 8.808865241979528e-6
allele num: 113522
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.168+19A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.168+19A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.319+19A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-167+19A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.168+19A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.168+19A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-167+19A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.168+19A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.168+19A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.168+19A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.168+19A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.168+19A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.165+19A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.168+19A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.168+19A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.168+19A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.168+19A>G
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5636
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16690
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

7-114066755-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066755
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066755
    reference: chr 7
allele count: 1
allele frequency: 8.856768342367236e-6
allele num: 112908
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.168+21T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.168+21T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.319+21T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.168+21T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-167+21T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.168+21T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.168+21T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.168+21T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.168+21T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.168+21T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.168+21T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-167+21T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.168+21T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.165+21T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.168+21T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.168+21T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.168+21T>C
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15695
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5405
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD

7-114066764-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066764
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066764
    reference: chr 7
allele count: 1
allele frequency: 9.055018291136948e-6
allele num: 110436
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.319+30A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-167+30A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.168+30A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.168+30A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.168+30A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.168+30A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.168+30A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.168+30A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.168+30A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.165+30A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.168+30A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-167+30A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.168+30A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.168+30A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.168+30A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.168+30A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.168+30A>G
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17400
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4341
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

7-114066773-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066773
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066773
    reference: chr 7
allele count: 6
allele frequency: 5.564830272676683e-5
allele num: 107820
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.168+39A>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.168+39A>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.168+39A>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.168+39A>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.319+39A>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.168+39A>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.168+39A>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.168+39A>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-167+39A>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.168+39A>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.168+39A>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.168+39A>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.168+39A>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.168+39A>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-167+39A>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.165+39A>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.168+39A>T
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7210
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5372
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

7-114066775-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114066775
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114066775
    reference: chr 7
allele count: 2
allele frequency: 1.877546422335292e-5
allele num: 106522
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.168+41G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.168+41G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-167+41G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.168+41G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.168+41G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.168+41G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.168+41G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.168+41G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.319+41G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.168+41G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.168+41G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.168+41G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.168+41G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-167+41G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.168+41G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.165+41G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.168+41G>A
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3186
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

7-114103120-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114103120
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114103120
    reference: chr 7
allele count: 1
allele frequency: 1.972386587771203e-4
allele num: 5070
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.168+36386G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-167+36386G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.168+36386G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-167+36386G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.168+36386G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.169-9G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.168+36386G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.168+36386G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.169-35818G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.168+36386G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.165+36386G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.168+36386G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.168+36386G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.168+36386G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.319+36386G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.168+36386G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.168+36386G>T
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

7-114103151-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114103151
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114103151
    reference: chr 7
allele count: 1
allele frequency: 2.733734281027884e-4
allele num: 3658
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.168+36417A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.168+36417A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.168+36417A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.168+36417A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-167+36417A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.319+36417A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.168+36417A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.168+36417A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-167+36417A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.191A>G
  hgvsp: ENSP00000395552.1:p.His64Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.168+36417A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.168+36417A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.168+36417A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.168+36417A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.168+36417A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.169-35787A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.165+36417A>G
  variant of: http://identifiers.org/hgnc/13875
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His64Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

7-114103177-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114103177
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114103177
    reference: chr 7
allele count: 1
allele frequency: 3.469812630117973e-4
allele num: 2882
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.169-35761G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.168+36443G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.168+36443G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-167+36443G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.168+36443G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.168+36443G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.168+36443G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.217G>A
  hgvsp: ENSP00000395552.1:p.Gly73Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.168+36443G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.168+36443G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.319+36443G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.168+36443G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.168+36443G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-167+36443G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.165+36443G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.168+36443G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.168+36443G>A
  variant of: http://identifiers.org/hgnc/13875
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2943
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly73Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum

7-114103208-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114103208
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114103208
    reference: chr 7
allele count: 33
allele frequency: 3.36734693877551e-2
allele num: 980
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-167+36474G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.168+36474G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.168+36474G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.168+36474G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.165+36474G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.168+36474G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.319+36474G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: stop_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.248G>C
  hgvsp: ENSP00000395552.1:p.Ter83SerextTer3
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.168+36474G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.168+36474G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.168+36474G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.168+36474G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.168+36474G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.169-35730G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.168+36474G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.168+36474G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-167+36474G>C
  variant of: http://identifiers.org/hgnc/13875
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ter83SerextTer3
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

7-114103215-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114103215
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114103215
    reference: chr 7
allele count: 2
allele frequency: 2.808988764044944e-3
allele num: 712
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.168+36481C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-167+36481C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.168+36481C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.168+36481C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.168+36481C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*6C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.168+36481C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.168+36481C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.169-35723C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.168+36481C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.319+36481C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.168+36481C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.168+36481C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-167+36481C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.168+36481C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.168+36481C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.165+36481C>G
  variant of: http://identifiers.org/hgnc/13875
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

7-114138911-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114138911
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114138911
    reference: chr 7
allele count: 1
allele frequency: 5.55926173004225e-5
allele num: 17988
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169-35761C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169-35761C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169-35761C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169-35761C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320-35761C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166-35761C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.168+72177C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169-35761C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169-35761C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169-35761C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166-35761C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169-35761C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*18-27C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166-35761C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169-35761C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.169-27C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169-35761C>T
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

7-114138996-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114138996
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114138996
    reference: chr 7
allele count: 1
allele frequency: 5.486065393899495e-5
allele num: 18228
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169-35676T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169-35676T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169-35676T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.168+72262T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169-35676T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320-35676T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169-35676T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169-35676T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169-35676T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166-35676T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169-35676T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*76T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169-35676T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166-35676T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169-35676T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166-35676T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.*23T>A
  variant of: http://identifiers.org/hgnc/13875
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

7-114139003-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114139003
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114139004
    reference: chr 7
allele count: 1
allele frequency: 5.489076737292787e-5
allele num: 18218
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*84dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169-35668dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169-35668dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169-35668dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169-35668dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000418100
  ensembl transcript: ENST00000462331
  gene symbol: FOXP2
  hgvsc: ENST00000462331.1:c.*31dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169-35668dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166-35668dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169-35668dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169-35668dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169-35668dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169-35668dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166-35668dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169-35668dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320-35668dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.168+72270dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166-35668dupT
  variant of: http://identifiers.org/hgnc/13875
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

7-114174621-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174621
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174621
    reference: chr 7
allele count: 1
allele frequency: 8.306337735692333e-6
allele num: 120390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166-51T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169-51T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*229-51T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169-51T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96971T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169-51T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320-51T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169-51T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169-51T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169-51T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169-51T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169-51T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166-51T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169-51T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166-51T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169-51T>G
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4939
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8909
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD

7-114174624-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174624
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174625
    reference: chr 7
allele count: 1
allele frequency: 8.307441806370146e-6
allele num: 120374
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166-46dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169-46dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166-46dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169-46dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*229-46dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169-46dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169-46dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166-46dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320-46dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169-46dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169-46dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169-46dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96966dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169-46dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169-46dupT
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169-46dupT
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10611
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4932
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

7-114174624-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174624
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174624
    reference: chr 7
allele count: 666
allele frequency: 5.532756243042517e-3
allele num: 120374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166-48C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169-48C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169-48C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169-48C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169-48C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169-48C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169-48C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169-48C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169-48C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169-48C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166-48C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96968C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166-48C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320-48C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*229-48C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169-48C>T
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 7.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 4932
  bin: 4.75e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 5.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 9.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 5.75e1
  variant carriers: 56
genotype quality: GenotypeQuality
num of homozygotes: 5
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ

7-114174633-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174633
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174633
    reference: chr 7
allele count: 11
allele frequency: 9.133330012122419e-5
allele num: 120438
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169-39C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169-39C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*229-39C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169-39C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320-39C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169-39C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96959C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169-39C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169-39C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166-39C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169-39C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166-39C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169-39C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166-39C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169-39C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169-39C>G
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11873
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6896
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/7-114174636-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174636
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174636
    reference: chr 7
allele count: 3
allele frequency: 2.490866821653935e-5
allele num: 120440
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166-36C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*229-36C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320-36C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96956C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169-36C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169-36C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169-36C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169-36C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169-36C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169-36C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166-36C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169-36C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166-36C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169-36C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169-36C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169-36C>A
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11875
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/7-114174638-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174638
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174638
    reference: chr 7
allele count: 1
allele frequency: 8.301510874979247e-6
allele num: 120460
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169-34A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169-34A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320-34A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169-34A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169-34A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166-34A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169-34A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169-34A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166-34A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96954A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*229-34A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169-34A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169-34A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166-34A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169-34A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169-34A>C
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

7-114174640-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174640
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174640
    reference: chr 7
allele count: 2
allele frequency: 1.659751037344398e-5
allele num: 120500
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169-32A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96952A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169-32A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169-32A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169-32A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166-32A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169-32A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320-32A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169-32A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169-32A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166-32A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*229-32A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166-32A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169-32A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169-32A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169-32A>G
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10814
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum

7-114174652-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174652
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174652
    reference: chr 7
allele count: 2
allele frequency: 1.657577616071872e-5
allele num: 120658
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169-20G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166-20G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169-20G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169-20G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320-20G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169-20G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169-20G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96940G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166-20G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169-20G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169-20G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169-20G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169-20G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169-20G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*229-20G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166-20G>A
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8956
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

7-114174653-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174653
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174653
    reference: chr 7
allele count: 1
allele frequency: 8.285278716776033e-6
allele num: 120696
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169-19G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166-19G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169-19G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320-19G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96939G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169-19G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169-19G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169-19G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166-19G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169-19G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*229-19G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169-19G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166-19G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169-19G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169-19G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169-19G>C
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8956
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

7-114174657-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174657
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174657
    reference: chr 7
allele count: 1
allele frequency: 8.28239659427852e-6
allele num: 120738
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169-15C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169-15C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169-15C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169-15C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169-15C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169-15C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169-15C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320-15C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169-15C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169-15C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96935C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*229-15C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166-15C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166-15C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166-15C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169-15C>T
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10947
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8958
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3242
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/7-114174658-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174658
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174658
    reference: chr 7
allele count: 90
allele frequency: 7.453663061302237e-4
allele num: 120746
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169-14A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169-14A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166-14A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166-14A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169-14A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*229-14A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169-14A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96934A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169-14A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169-14A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169-14A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169-14A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166-14A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169-14A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169-14A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320-14A>C
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 9.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6891
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 1
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

7-114174663-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174663
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174663
    reference: chr 7
allele count: 1
allele frequency: 8.276090374906894e-6
allele num: 120830
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169-9T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169-9T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169-9T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320-9T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169-9T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166-9T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169-9T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169-9T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96929T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166-9T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166-9T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*229-9T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169-9T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169-9T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169-9T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169-9T>C
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8958
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4911
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

7-114174669-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174669
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174669
    reference: chr 7
allele count: 1
allele frequency: 8.269109913008963e-6
allele num: 120932
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169-3T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320-3T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169-3T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169-3T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169-3T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169-3T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*229-3T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169-3T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169-3T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166-3T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166-3T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169-3T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166-3T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169-3T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169-3T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96923T>C
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8957
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3622
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.169-3T>C
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

7-114174672-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174672
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174672
    reference: chr 7
allele count: 1
allele frequency: 8.26296045347127e-6
allele num: 121022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.169G>A
  hgvsp: ENSP00000377132.2:p.Ala57Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.169G>A
  hgvsp: ENSP00000386200.3:p.Ala57Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.169G>A
  hgvsp: ENSP00000367482.3:p.Ala57Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96920G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.169G>A
  hgvsp: ENSP00000265436.7:p.Ala57Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.320G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.169G>A
  hgvsp: ENSP00000409826.2:p.Ala57Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*229G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.169G>A
  hgvsp: ENSP00000353367.4:p.Ala57Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.169G>A
  hgvsp: ENSP00000405470.1:p.Ala57Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.166G>A
  hgvsp: ENSP00000375084.3:p.Ala56Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.169G>A
  hgvsp: ENSP00000377135.2:p.Ala57Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-166G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-166G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.169G>A
  hgvsp: ENSP00000416825.1:p.Ala57Thr
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.169G>A
  hgvsp: ENSP00000385069.4:p.Ala57Thr
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala57Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

7-114174677-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174677
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174677
    reference: chr 7
allele count: 1
allele frequency: 8.260503229856763e-6
allele num: 121058
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-161C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.171C>G
  hgvsp: ENST00000390668.3:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.325C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.174C>G
  hgvsp: ENST00000412402.1:c.174C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.174C>G
  hgvsp: ENST00000408937.3:c.174C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.174C>G
  hgvsp: ENST00000452963.2:c.174C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96915C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.174C>G
  hgvsp: ENST00000378237.3:c.174C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.174C>G
  hgvsp: ENST00000403559.4:c.174C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.174C>G
  hgvsp: ENST00000360232.4:c.174C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.174C>G
  hgvsp: ENST00000441290.2:c.174C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.174C>G
  hgvsp: ENST00000350908.4:c.174C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.174C>G
  hgvsp: ENST00000393498.2:c.174C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*234C>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.174C>G
  hgvsp: ENST00000393494.2:c.174C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-161C>G
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu58Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

7-114174677-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174677
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174677
    reference: chr 7
allele count: 2
allele frequency: 1.652100645971353e-5
allele num: 121058
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.325C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-161C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*234C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.174C>T
  hgvsp: ENST00000393494.2:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.174C>T
  hgvsp: ENST00000378237.3:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.174C>T
  hgvsp: ENST00000452963.2:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.174C>T
  hgvsp: ENST00000360232.4:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.174C>T
  hgvsp: ENST00000441290.2:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.174C>T
  hgvsp: ENST00000393498.2:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.174C>T
  hgvsp: ENST00000403559.4:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.174C>T
  hgvsp: ENST00000350908.4:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.174C>T
  hgvsp: ENST00000412402.1:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.171C>T
  hgvsp: ENST00000390668.3:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-161C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.174C>T
  hgvsp: ENST00000408937.3:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96915C>T
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8961
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6895
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu58Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/7-114174686-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174686
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174686
    reference: chr 7
allele count: 1
allele frequency: 8.255729476256522e-6
allele num: 121128
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*243A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.183A>C
  hgvsp: ENST00000408937.3:c.183A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.183A>C
  hgvsp: ENST00000360232.4:c.183A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.183A>C
  hgvsp: ENST00000378237.3:c.183A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.183A>C
  hgvsp: ENST00000441290.2:c.183A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.183A>C
  hgvsp: ENST00000403559.4:c.183A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.180A>C
  hgvsp: ENST00000390668.3:c.180A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-152A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96906A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.334A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-152A>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.183A>C
  hgvsp: ENST00000452963.2:c.183A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.183A>C
  hgvsp: ENST00000412402.1:c.183A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.183A>C
  hgvsp: ENST00000350908.4:c.183A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.183A>C
  hgvsp: ENST00000393498.2:c.183A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.183A>C
  hgvsp: ENST00000393494.2:c.183A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala61Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

7-114174689-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174689
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174689
    reference: chr 7
allele count: 2
allele frequency: 1.651036851142517e-5
allele num: 121136
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.186A>G
  hgvsp: ENST00000452963.2:c.186A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-149A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.186A>G
  hgvsp: ENST00000408937.3:c.186A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.186A>G
  hgvsp: ENST00000412402.1:c.186A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.186A>G
  hgvsp: ENST00000393498.2:c.186A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.337A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*246A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.186A>G
  hgvsp: ENST00000350908.4:c.186A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.186A>G
  hgvsp: ENST00000403559.4:c.186A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.186A>G
  hgvsp: ENST00000393494.2:c.186A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.186A>G
  hgvsp: ENST00000378237.3:c.186A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-149A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.183A>G
  hgvsp: ENST00000390668.3:c.183A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.186A>G
  hgvsp: ENST00000441290.2:c.186A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96903A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.186A>G
  hgvsp: ENST00000360232.4:c.186A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11044
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg62Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/7-114174696-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174696
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174696
    reference: chr 7
allele count: 2
allele frequency: 1.651009592365732e-5
allele num: 121138
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.193C>A
  hgvsp: ENSP00000353367.4:p.Leu65Ile
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96896C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.193C>A
  hgvsp: ENSP00000377132.2:p.Leu65Ile
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.193C>A
  hgvsp: ENSP00000386200.3:p.Leu65Ile
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.193C>A
  hgvsp: ENSP00000416825.1:p.Leu65Ile
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-142C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.193C>A
  hgvsp: ENSP00000377135.2:p.Leu65Ile
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.193C>A
  hgvsp: ENSP00000265436.7:p.Leu65Ile
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.193C>A
  hgvsp: ENSP00000405470.1:p.Leu65Ile
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.193C>A
  hgvsp: ENSP00000367482.3:p.Leu65Ile
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.190C>A
  hgvsp: ENSP00000375084.3:p.Leu64Ile
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.193C>A
  hgvsp: ENSP00000385069.4:p.Leu65Ile
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.193C>A
  hgvsp: ENSP00000409826.2:p.Leu65Ile
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.344C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-142C>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*253C>A
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3699
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu65Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum

7-114174702-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174702
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174702
    reference: chr 7
allele count: 1
allele frequency: 8.254094030639197e-6
allele num: 121152
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-136C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.199C>T
  hgvsp: ENSP00000377135.2:p.Gln67Ter
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.199C>T
  hgvsp: ENSP00000265436.7:p.Gln67Ter
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.199C>T
  hgvsp: ENSP00000405470.1:p.Gln67Ter
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.199C>T
  hgvsp: ENSP00000385069.4:p.Gln67Ter
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.199C>T
  hgvsp: ENSP00000377132.2:p.Gln67Ter
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.350C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.199C>T
  hgvsp: ENSP00000367482.3:p.Gln67Ter
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96890C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.196C>T
  hgvsp: ENSP00000375084.3:p.Gln66Ter
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.199C>T
  hgvsp: ENSP00000409826.2:p.Gln67Ter
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*259C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.199C>T
  hgvsp: ENSP00000416825.1:p.Gln67Ter
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.199C>T
  hgvsp: ENSP00000353367.4:p.Gln67Ter
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-136C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.199C>T
  hgvsp: ENSP00000386200.3:p.Gln67Ter
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln67Ter
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

7-114174703-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174703
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174703
    reference: chr 7
allele count: 1
allele frequency: 8.254775387561705e-6
allele num: 121142
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.200A>G
  hgvsp: ENSP00000386200.3:p.Gln67Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.200A>G
  hgvsp: ENSP00000367482.3:p.Gln67Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.351A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.200A>G
  hgvsp: ENSP00000377135.2:p.Gln67Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.200A>G
  hgvsp: ENSP00000353367.4:p.Gln67Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-135A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.197A>G
  hgvsp: ENSP00000375084.3:p.Gln66Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-135A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.200A>G
  hgvsp: ENSP00000409826.2:p.Gln67Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.200A>G
  hgvsp: ENSP00000377132.2:p.Gln67Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.200A>G
  hgvsp: ENSP00000385069.4:p.Gln67Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*260A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.200A>G
  hgvsp: ENSP00000405470.1:p.Gln67Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96889A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.200A>G
  hgvsp: ENSP00000265436.7:p.Gln67Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.200A>G
  hgvsp: ENSP00000416825.1:p.Gln67Arg
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4907
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11042
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln67Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

7-114174711-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174711
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174711
    reference: chr 7
allele count: 6
allele frequency: 4.953028777097195e-5
allele num: 121138
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-127A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*268A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.208A>G
  hgvsp: ENSP00000409826.2:p.Thr70Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.359A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.208A>G
  hgvsp: ENSP00000386200.3:p.Thr70Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.208A>G
  hgvsp: ENSP00000416825.1:p.Thr70Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-127A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.205A>G
  hgvsp: ENSP00000375084.3:p.Thr69Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96881A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.208A>G
  hgvsp: ENSP00000367482.3:p.Thr70Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.208A>G
  hgvsp: ENSP00000385069.4:p.Thr70Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.208A>G
  hgvsp: ENSP00000377135.2:p.Thr70Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.208A>G
  hgvsp: ENSP00000353367.4:p.Thr70Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.208A>G
  hgvsp: ENSP00000265436.7:p.Thr70Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.208A>G
  hgvsp: ENSP00000405470.1:p.Thr70Ala
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.208A>G
  hgvsp: ENSP00000377132.2:p.Thr70Ala
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11927
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr70Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

7-114174727-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174727
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174727
    reference: chr 7
allele count: 1
allele frequency: 8.258183860205463e-6
allele num: 121092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.224C>T
  hgvsp: ENSP00000367482.3:p.Ser75Phe
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-111C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.224C>T
  hgvsp: ENSP00000377135.2:p.Ser75Phe
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.224C>T
  hgvsp: ENSP00000409826.2:p.Ser75Phe
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.224C>T
  hgvsp: ENSP00000416825.1:p.Ser75Phe
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.224C>T
  hgvsp: ENSP00000353367.4:p.Ser75Phe
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96865C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.224C>T
  hgvsp: ENSP00000385069.4:p.Ser75Phe
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*284C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.224C>T
  hgvsp: ENSP00000265436.7:p.Ser75Phe
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.224C>T
  hgvsp: ENSP00000386200.3:p.Ser75Phe
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.221C>T
  hgvsp: ENSP00000375084.3:p.Ser74Phe
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.224C>T
  hgvsp: ENSP00000377132.2:p.Ser75Phe
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.224C>T
  hgvsp: ENSP00000405470.1:p.Ser75Phe
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.375C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-111C>T
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8959
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser75Phe
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

7-114174736-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174736
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174736
    reference: chr 7
allele count: 1
allele frequency: 8.260912665631299e-6
allele num: 121052
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.233G>A
  hgvsp: ENSP00000377135.2:p.Ser78Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-102G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.233G>A
  hgvsp: ENSP00000377132.2:p.Ser78Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96856G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.233G>A
  hgvsp: ENSP00000265436.7:p.Ser78Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.233G>A
  hgvsp: ENSP00000416825.1:p.Ser78Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.230G>A
  hgvsp: ENSP00000375084.3:p.Ser77Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.233G>A
  hgvsp: ENSP00000405470.1:p.Ser78Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.233G>A
  hgvsp: ENSP00000385069.4:p.Ser78Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.384G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.233G>A
  hgvsp: ENSP00000409826.2:p.Ser78Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.233G>A
  hgvsp: ENSP00000386200.3:p.Ser78Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*293G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.233G>A
  hgvsp: ENSP00000367482.3:p.Ser78Asn
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-102G>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.233G>A
  hgvsp: ENSP00000353367.4:p.Ser78Asn
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser78Asn
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

7-114174740-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174740
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174740
    reference: chr 7
allele count: 8
allele frequency: 6.609712973214139e-5
allele num: 121034
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-98T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.237T>G
  hgvsp: ENSP00000416825.1:p.Ser79Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.237T>G
  hgvsp: ENSP00000367482.3:p.Ser79Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-98T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.237T>G
  hgvsp: ENSP00000353367.4:p.Ser79Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*297T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.237T>G
  hgvsp: ENSP00000377132.2:p.Ser79Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.237T>G
  hgvsp: ENSP00000386200.3:p.Ser79Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.234T>G
  hgvsp: ENSP00000375084.3:p.Ser78Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.237T>G
  hgvsp: ENSP00000377135.2:p.Ser79Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.237T>G
  hgvsp: ENSP00000265436.7:p.Ser79Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.237T>G
  hgvsp: ENSP00000409826.2:p.Ser79Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.237T>G
  hgvsp: ENSP00000385069.4:p.Ser79Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96852T>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.237T>G
  hgvsp: ENSP00000405470.1:p.Ser79Arg
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.388T>G
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4907
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11925
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser79Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD

7-114174749-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174749
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174749
    reference: chr 7
allele count: 1
allele frequency: 8.266512358435975e-6
allele num: 120970
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-89G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.243G>C
  hgvsp: ENSP00000375084.3:p.Gln81His
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.246G>C
  hgvsp: ENSP00000377135.2:p.Gln82His
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.246G>C
  hgvsp: ENSP00000377132.2:p.Gln82His
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.246G>C
  hgvsp: ENSP00000405470.1:p.Gln82His
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.246G>C
  hgvsp: ENSP00000416825.1:p.Gln82His
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.246G>C
  hgvsp: ENSP00000386200.3:p.Gln82His
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.246G>C
  hgvsp: ENSP00000409826.2:p.Gln82His
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.246G>C
  hgvsp: ENSP00000385069.4:p.Gln82His
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.246G>C
  hgvsp: ENSP00000367482.3:p.Gln82His
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.246G>C
  hgvsp: ENSP00000353367.4:p.Gln82His
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.246G>C
  hgvsp: ENSP00000265436.7:p.Gln82His
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*306G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.397G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-89G>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96843G>C
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3512
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln82His
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

7-114174750-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174750
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174750
    reference: chr 7
allele count: 1
allele frequency: 8.267059076404159e-6
allele num: 120962
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*307A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-88A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96842A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.247A>G
  hgvsp: ENSP00000377135.2:p.Arg83Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.247A>G
  hgvsp: ENSP00000386200.3:p.Arg83Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.398A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-88A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.247A>G
  hgvsp: ENSP00000377132.2:p.Arg83Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.247A>G
  hgvsp: ENSP00000409826.2:p.Arg83Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.247A>G
  hgvsp: ENSP00000367482.3:p.Arg83Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.247A>G
  hgvsp: ENSP00000265436.7:p.Arg83Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.244A>G
  hgvsp: ENSP00000375084.3:p.Arg82Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.247A>G
  hgvsp: ENSP00000353367.4:p.Arg83Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.247A>G
  hgvsp: ENSP00000385069.4:p.Arg83Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.247A>G
  hgvsp: ENSP00000416825.1:p.Arg83Gly
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.247A>G
  hgvsp: ENSP00000405470.1:p.Arg83Gly
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg83Gly
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ

7-114174762-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174762
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174762
    reference: chr 7
allele count: 2
allele frequency: 1.655190677966102e-5
allele num: 120832
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.258+1G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*318+1G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96830G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-77+1G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.409+1G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.258+1G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.258+1G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.255+1G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.258+1G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-77+1G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.258+1G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.258+1G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.258+1G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.258+1G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.258+1G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.258+1G>T
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8957
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.258+1G>T
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

7-114174781-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174781
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174781
    reference: chr 7
allele count: 1
allele frequency: 8.307303781484682e-6
allele num: 120376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.258+20C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.258+20C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.258+20C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-77+20C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*318+20C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96811C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.258+20C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.258+20C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.258+20C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.409+20C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.258+20C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.258+20C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.255+20C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-77+20C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.258+20C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.258+20C>T
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

7-114174782-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174782
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174782
    reference: chr 7
allele count: 1
allele frequency: 8.310893919750009e-6
allele num: 120324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.258+21C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.258+21C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.258+21C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.258+21C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96810C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.255+21C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.258+21C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.258+21C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.258+21C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*318+21C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.409+21C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-77+21C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.258+21C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.258+21C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-77+21C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.258+21C>T
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8880
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

7-114174784-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174784
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174784
    reference: chr 7
allele count: 2
allele frequency: 1.662648599218555e-5
allele num: 120290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.258+23T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.258+23T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.258+23T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96808T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-77+23T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.255+23T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.258+23T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.258+23T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.258+23T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.258+23T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-77+23T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.258+23T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.258+23T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.409+23T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.258+23T>A
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*318+23T>A
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10539
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

7-114174785-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114174785
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114174785
    reference: chr 7
allele count: 1
allele frequency: 8.314625426124552e-6
allele num: 120270
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.258+24G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.258+24G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*318+24G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.258+24G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-77+24G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.258+24G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.409+24G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.258+24G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-96807G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-77+24G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.258+24G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.258+24G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.258+24G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.258+24G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.255+24G>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.258+24G>T
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6878
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8836
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD

7-114178407-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114178407
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114178407
    reference: chr 7
allele count: 1
allele frequency: 6.869075422448138e-5
allele num: 14558
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.258+3646A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.258+3646A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.258+3646A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-50A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-50A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.258+3646A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.258+3646A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.258+3646A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.*21A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.*21A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*345A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.255+3646A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-93185A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.258+3646A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.258+3646A>G
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.409+3646A>G
  variant of: http://identifiers.org/hgnc/13875
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

7-114178427-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114178427
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114178427
    reference: chr 7
allele count: 1
allele frequency: 6.879471656576775e-5
allele num: 14536
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*365C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.255+3666C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-93165C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.258+3666C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.258+3666C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.258+3666C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-30C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.258+3666C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.258+3666C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.*41C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.258+3666C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-30C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.258+3666C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.409+3666C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.258+3666C>T
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.*41C>T
  variant of: http://identifiers.org/hgnc/13875
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

7-114178474-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 114178474
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 114178474
    reference: chr 7
allele count: 22
allele frequency: 1.544293134915064e-3
allele num: 14246
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000353367
  ensembl transcript: ENST00000360232
  gene symbol: FOXP2
  hgvsc: ENST00000360232.4:c.258+3713T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377133
  ensembl transcript: ENST00000393495
  gene symbol: FOXP2
  hgvsc: ENST00000393495.3:c.169-93118T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000367482
  ensembl transcript: ENST00000378237
  gene symbol: FOXP2
  hgvsc: ENST00000378237.3:c.258+3713T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000265436
  ensembl transcript: ENST00000350908
  gene symbol: FOXP2
  hgvsc: ENST00000350908.4:c.258+3713T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377129
  ensembl transcript: ENST00000393489
  gene symbol: FOXP2
  hgvsc: ENST00000393489.3:c.-19+36T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000375084
  ensembl transcript: ENST00000390668
  gene symbol: FOXP2
  hgvsc: ENST00000390668.3:c.255+3713T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl transcript: ENST00000459666
  gene symbol: FOXP2
  hgvsc: ENST00000459666.1:n.409+3713T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000395552
  ensembl transcript: ENST00000440349
  gene symbol: FOXP2
  hgvsc: ENST00000440349.1:c.*376+36T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000405470
  ensembl transcript: ENST00000412402
  gene symbol: FOXP2
  hgvsc: ENST00000412402.1:c.*52+36T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000409826
  ensembl transcript: ENST00000452963
  gene symbol: FOXP2
  hgvsc: ENST00000452963.2:c.258+3713T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000386200
  ensembl transcript: ENST00000408937
  gene symbol: FOXP2
  hgvsc: ENST00000408937.3:c.258+3713T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377135
  ensembl transcript: ENST00000393498
  gene symbol: FOXP2
  hgvsc: ENST00000393498.2:c.258+3713T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377132
  ensembl transcript: ENST00000393494
  gene symbol: FOXP2
  hgvsc: ENST00000393494.2:c.258+3713T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000377137
  ensembl transcript: ENST00000393500
  gene symbol: FOXP2
  hgvsc: ENST00000393500.3:c.-19+36T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000416825
  ensembl transcript: ENST00000441290
  gene symbol: FOXP2
  hgvsc: ENST00000441290.2:c.*52+36T>C
  variant of: http://identifiers.org/hgnc/13875
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000128573
  ensembl protein: ENSP00000385069
  ensembl transcript: ENST00000403559
  gene symbol: FOXP2
  hgvsc: ENST00000403559.4:c.258+3713T>C
  variant of: http://identifiers.org/hgnc/13875
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum

GenotypeDepth
all individuals: 79
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 68
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 192
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1347
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 311
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 98
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20913
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1672
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 24507
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1027
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 49
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 213
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2218
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6409
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 444
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5114
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44135
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5898
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1347
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1191
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.071645415907711e-5
allele num: 16470
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.21e0

MQ
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FS
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QD
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VQSLOD
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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Latino
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MQ
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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ReadPosRankSum
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DP
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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South Asian
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African
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European (Finnish)
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East Asian
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European (Non-Finnish)
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DP
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MQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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QD
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ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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East Asian
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Other
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European (Finnish)
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Latino
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VQSLOD
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ReadPosRankSum
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QD
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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FS
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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African
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South Asian
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East Asian
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Latino
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European (Finnish)
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Other
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ClippingRankSum
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QD
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ReadPosRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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BaseQRankSum
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MQRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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European (Non-Finnish)
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Other
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Latino
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African
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South Asian
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FS
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MQRankSum
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QD
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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DP
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MQ
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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South Asian
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European (Finnish)
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African
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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DP
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MQ
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InbreedingCoeff
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MQRankSum
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FS
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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Other
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South Asian
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East Asian
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European (Finnish)
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FS
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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MQ
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BaseQRankSum
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QD
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VQSLOD
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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East Asian
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South Asian
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African
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European (Finnish)
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ReadPosRankSum
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FS
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MQRankSum
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DP
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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Latino
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South Asian
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European (Finnish)
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East Asian
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European (Non-Finnish)
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQ
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FS
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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African
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South Asian
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Other
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European (Finnish)
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Latino
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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DP
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QD
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FS
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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East Asian
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Latino
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South Asian
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ReadPosRankSum
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FS
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MQRankSum
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DP
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MQ
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QD
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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South Asian
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FS
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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DP
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BaseQRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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Latino
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East Asian
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African
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Other
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QD
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MQ
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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DP
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FS
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Other
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Latino
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South Asian
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MQRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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BaseQRankSum
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DP
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FS
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ReadPosRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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East Asian
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European (Finnish)
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QD
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MQ
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DP
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MQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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BaseQRankSum
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East Asian
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South Asian
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African
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QD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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FS
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MQ
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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South Asian
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East Asian
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Latino
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Other
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MQ
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DP
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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QD
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MQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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European (Non-Finnish)
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East Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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ClippingRankSum
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MQ
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VQSLOD
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FS
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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QD
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ReadPosRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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European (Non-Finnish)
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European (Finnish)
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African
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Other
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South Asian
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East Asian
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DP
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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QD
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ReadPosRankSum
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FS
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VQSLOD
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MQ
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Latino
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South Asian
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Other
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European (Non-Finnish)
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East Asian
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BaseQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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QD
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FS
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VQSLOD
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MQRankSum
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DP
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Latino
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African
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Other
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InbreedingCoeff
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MQ
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QD
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ReadPosRankSum
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DP
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FS
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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East Asian
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Latino
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South Asian
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African
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European (Finnish)
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Other
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European (Non-Finnish)
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InbreedingCoeff
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MQ
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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SIO_000300: 4.7622e4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 4.94e0

VQSLOD
type: SiteQuality
SIO_000300: -2.459e0

MQRankSum
type: SiteQuality
SIO_000300: -5.97e-1

GenotypeDepth
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variant carriers: 91

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 3

South Asian
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allele count: 29
allele frequency: 4.434250764525994e-2
allele num: 654
num of homozygotes: 0

Latino
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allele frequency: 1.0e-1
allele num: 10
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Other
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 1
allele frequency: 5.0e-2
allele num: 20
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 9.615384615384616e-3
allele num: 208
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 80
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

VQSLOD
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QD
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SIO_000300: 1.526e1

BaseQRankSum
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SIO_000300: 6.840000000000001e-1

MQ
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SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: -5.45e-2

MQRankSum
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SIO_000300: 2.48e-1

FS
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SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: 3.22e-1

DP
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SIO_000300: 3.3916e4

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 2
allele frequency: 4.424778761061947e-3
allele num: 452
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.075e0

DP
type: SiteQuality
SIO_000300: 3.0161e4

ClippingRankSum
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SIO_000300: 6.33e-1

MQ
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SIO_000300: 6.0e1

ReadPosRankSum
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SIO_000300: 1.78e0

QD
type: SiteQuality
SIO_000300: 1.609e1

MQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

InbreedingCoeff
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SIO_000300: -6.89e-2

VQSLOD
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SIO_000300: -2.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 1
allele frequency: 8.665511265164644e-4
allele num: 1154
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1718
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -5.51e-1

DP
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SIO_000300: 5.42819e5

InbreedingCoeff
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VQSLOD
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MQ
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

South Asian
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allele frequency: 1.304801670146138e-4
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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QD
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DP
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VQSLOD
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ClippingRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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Other
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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ClippingRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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QD
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FS
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VQSLOD
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BaseQRankSum
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MQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.506432466632521e-5
allele num: 66382
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

BaseQRankSum
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SIO_000300: 6.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.37e-1

InbreedingCoeff
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SIO_000300: 1.35e-2

VQSLOD
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SIO_000300: 3.1e0

DP
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SIO_000300: 2.507354e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.675e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10094
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506750241080039e-5
allele num: 66368
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.68e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
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SIO_000300: 2.509989e6

ReadPosRankSum
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SIO_000300: 5.33e-1

QD
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SIO_000300: 1.404e1

BaseQRankSum
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SIO_000300: -3.438e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.5e-3

GenotypeDepth
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bin: 9.25e1
variant carriers: 17

GenotypeDepth
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variant carriers: 39

GenotypeDepth
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variant carriers: 60

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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variant carriers: 53

GenotypeDepth
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variant carriers: 16

GenotypeDepth
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variant carriers: 22

GenotypeDepth
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variant carriers: 59

GenotypeDepth
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variant carriers: 18

GenotypeDepth
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variant carriers: 58

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 659

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6424
bin: 6.75e1
variant carriers: 0

Latino
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allele count: 32
allele frequency: 2.820377225453904e-3
allele num: 11346
num of homozygotes: 0

South Asian
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allele count: 59
allele frequency: 3.580097087378641e-3
allele num: 16480
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 70
allele frequency: 1.063506532968703e-2
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 18
allele frequency: 1.783237566871409e-3
allele num: 10094
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 482
allele frequency: 7.262536162005786e-3
allele num: 66368
num of homozygotes: 4

Other
type: Population
allele count: 5
allele frequency: 5.543237250554324e-3
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.5e-3

DP
type: SiteQuality
SIO_000300: 2.509989e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.438e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.68e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.91e0

QD
type: SiteQuality
SIO_000300: 1.404e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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bin: 1.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 9.688215606834595e-4
allele num: 11354
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

MQRankSum
type: SiteQuality
SIO_000300: 1.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

QD
type: SiteQuality
SIO_000300: 1.515e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.75e-1

BaseQRankSum
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SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 2.500053e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.45e-1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.517936206740761e-5
allele num: 66402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11352
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 9.900000000000001e-3

ReadPosRankSum
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VQSLOD
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MQRankSum
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FS
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MQ
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BaseQRankSum
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ClippingRankSum
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SIO_000300: 2.51e-1

DP
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66412
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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Latino
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allele count: 1
allele frequency: 8.81057268722467e-5
allele num: 11350
num of homozygotes: 0

InbreedingCoeff
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VQSLOD
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MQRankSum
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DP
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FS
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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MQ
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QD
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 3.010869237948996e-5
allele num: 66426
num of homozygotes: 0

African
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Other
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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ReadPosRankSum
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FS
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QD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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MQ
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

European (Non-Finnish)
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African
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South Asian
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ReadPosRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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QD
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BaseQRankSum
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FS
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VQSLOD
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66488
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Other
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South Asian
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VQSLOD
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SIO_000300: -1.61e0

MQ
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ClippingRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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DP
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SIO_000300: 2.50722e6

ReadPosRankSum
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QD
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MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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African
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East Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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FS
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DP
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MQ
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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QD
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 9.805844283192783e-5
allele num: 10198
num of homozygotes: 0

South Asian
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allele num: 16498
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European (Finnish)
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Latino
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East Asian
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European (Non-Finnish)
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Other
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InbreedingCoeff
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FS
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ReadPosRankSum
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DP
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QD
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BaseQRankSum
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VQSLOD
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MQRankSum
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ClippingRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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African
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European (Finnish)
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East Asian
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Other
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Latino
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South Asian
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FS
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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FS
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MQRankSum
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DP
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VQSLOD
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QD
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ReadPosRankSum
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InbreedingCoeff
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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African
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European (Finnish)
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FS
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BaseQRankSum
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DP
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QD
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ClippingRankSum
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MQ
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MQRankSum
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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European (Finnish)
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European (Non-Finnish)
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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FS
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DP
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QD
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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South Asian
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East Asian
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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QD
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FS
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ReadPosRankSum
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DP
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GenotypeQuality
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African
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South Asian
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Latino
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East Asian
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QD
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ReadPosRankSum
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ClippingRankSum
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MQ
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DP
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FS
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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East Asian
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European (Finnish)
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African
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South Asian
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InbreedingCoeff
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QD
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BaseQRankSum
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MQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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African
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Latino
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European (Finnish)
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QD
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VQSLOD
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MQ
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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FS
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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European (Non-Finnish)
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Latino
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South Asian
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MQ
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FS
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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MQRankSum
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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East Asian
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European (Non-Finnish)
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Latino
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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FS
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QD
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MQ
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Latino
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African
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South Asian
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MQ
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ReadPosRankSum
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ClippingRankSum
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QD
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FS
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DP
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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Latino
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African
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East Asian
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European (Non-Finnish)
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European (Finnish)
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QD
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FS
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ClippingRankSum
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VQSLOD
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MQRankSum
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DP
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MQ
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501456412720339e-5
allele num: 66602
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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FS
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VQSLOD
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InbreedingCoeff
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SIO_000300: -2.0e-4

QD
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ClippingRankSum
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SIO_000300: -1.453e0

MQRankSum
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SIO_000300: 1.83e0

DP
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SIO_000300: 2.509085e6

ReadPosRankSum
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SIO_000300: 1.82e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 8
allele frequency: 1.201345506967804e-4
allele num: 66592
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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DP
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MQRankSum
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InbreedingCoeff
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SIO_000300: -2.0e-4

MQ
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SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 6.17e-1

ClippingRankSum
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SIO_000300: -3.79e-1

QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66554
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.641342074816814e-5
allele num: 10372
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.507394e6

MQRankSum
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SIO_000300: 1.13e0

FS
type: SiteQuality
SIO_000300: 1.864e0

InbreedingCoeff
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SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.904e1

ReadPosRankSum
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SIO_000300: 2.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.39e-1

VQSLOD
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SIO_000300: 2.17e-1

QD
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SIO_000300: 1.233e1

BaseQRankSum
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SIO_000300: 2.24e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 16484
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
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MQRankSum
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VQSLOD
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FS
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

African
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East Asian
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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MQRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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QD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Latino
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African
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European (Finnish)
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South Asian
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Other
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MQRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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FS
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ReadPosRankSum
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BaseQRankSum
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DP
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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InbreedingCoeff
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QD
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BaseQRankSum
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ReadPosRankSum
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MQ
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DP
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MQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

South Asian
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Latino
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allele frequency: 1.770224818551956e-4
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num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

African
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East Asian
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Other
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ReadPosRankSum
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FS
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VQSLOD
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InbreedingCoeff
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MQRankSum
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MQ
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QD
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ClippingRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
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allele count: 0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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South Asian
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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DP
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VQSLOD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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FS
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Non-Finnish)
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African
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Other
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East Asian
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European (Finnish)
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Latino
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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FS
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QD
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ReadPosRankSum
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ClippingRankSum
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MQ
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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num of homozygotes: 0

Latino
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Other
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East Asian
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European (Finnish)
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African
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South Asian
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ClippingRankSum
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QD
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DP
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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MQ
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MQRankSum
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FS
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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African
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East Asian
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European (Non-Finnish)
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European (Finnish)
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South Asian
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VQSLOD
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DP
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ClippingRankSum
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FS
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MQRankSum
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