11-10823342-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823342
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823342
    reference: chr 11
allele count: 4
allele frequency: 3.3309461552554e-5
allele num: 120086
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1300-21C>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+254C>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+254C>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1300-21C>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4229C>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1300-21C>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+499C>A
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8088
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4479
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18065
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4906
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2551
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1757
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

11-10823343-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823343
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823343
    reference: chr 11
allele count: 17
allele frequency: 1.41548709408826e-4
allele num: 120100
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1300-22T>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+253T>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4228T>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+253T>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+498T>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1300-22T>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1300-22T>A
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8086
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4477
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 18078
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 721
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2550
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8450
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23270
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

11-10823359-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823359
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823359
    reference: chr 11
allele count: 1
allele frequency: 8.400678774845007e-6
allele num: 119038
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+482C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1300-38C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+237C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4212C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+237C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1300-38C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1300-38C>T
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4481
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3079
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4329
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7270
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3201
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1831
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4717
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2352
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP

11-10823362-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823362
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823362
    reference: chr 11
allele count: 3
allele frequency: 2.526103065005052e-5
allele num: 118760
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1300-41C>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+234C>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4209C>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1300-41C>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+234C>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1300-41C>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+479C>G
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5376
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4306
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3040
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14624
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16773
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2111
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2301
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3143
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2507
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1722
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

11-10823363-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823363
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823363
    reference: chr 11
allele count: 1
allele frequency: 8.432414200185513e-6
allele num: 118590
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4208A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+233A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1300-42A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+478A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1300-42A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1300-42A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+233A>C
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 14170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3024
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6870
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5602
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1695
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2395
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2254
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2175
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3827
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3120
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

11-10823368-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823368
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823368
    reference: chr 11
allele count: 3
allele frequency: 2.542071279678682e-5
allele num: 118014
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1300-47T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1300-47T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+228T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1300-47T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+473T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4203T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+228T>C
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12270
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7172
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5567
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10927
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11384
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3772
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1202
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2871
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6248
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2835
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4517
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

11-10823550-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823550
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823550
    reference: chr 11
allele count: 22
allele frequency: 4.845814977973568e-2
allele num: 454
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+46C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+46C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+46C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+46C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+46C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4021C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+291C>T
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52534
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

11-10823551-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823551
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823551
    reference: chr 11
allele count: 4
allele frequency: 3.379405900442702e-5
allele num: 118364
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+45A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+290A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+45A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+45A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+45A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+45A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4020A>G
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24380
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3778
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3769
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3625
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52595
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: T
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

11-10823554-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823554
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823552
    reference: chr 11
allele count: 8
allele frequency: 2.45398773006135e-2
allele num: 326
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+40_1299+41delCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+285_53+286delCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4015_4016delCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+40_1299+41delCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+40_1299+41delCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+40_1299+41delCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+40_1299+41delCT
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24425
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3685
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3539
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: CAG
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

11-10823556-GAT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823556
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823554
    reference: chr 11
allele count: 1
allele frequency: 3.731343283582089e-3
allele num: 268
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+38_1299+39delAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+38_1299+39delAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4013_4014delAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+38_1299+39delAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+38_1299+39delAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+283_53+284delAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+38_1299+39delAT
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3540
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24426
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51568
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: GAT
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

11-10823557-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823557
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823556
    reference: chr 11
allele count: 29
allele frequency: 2.418601547904991e-4
allele num: 119904
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+38delA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+283delA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+38delA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4013delA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+38delA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+38delA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+38delA
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2578
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: AT
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/11-10823557-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823557
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823557
    reference: chr 11
allele count: 8
allele frequency: 6.672004270082733e-5
allele num: 119904
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+39T>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+39T>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+39T>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+39T>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4014T>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+284T>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+39T>G
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2578
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 947
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

11-10823557-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823557
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823557
    reference: chr 11
allele count: 1
allele frequency: 8.340005337603416e-6
allele num: 119904
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+39T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+284T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+39T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+39T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+39T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4014T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+39T>C
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2578
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29331
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3418
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-10823559-AAGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823559
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823556
    reference: chr 11
allele count: 29
allele frequency: 1.16e-1
allele num: 250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4009_4011delCCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+34_1299+36delCCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+279_53+281delCCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+34_1299+36delCCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+34_1299+36delCCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+34_1299+36delCCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+34_1299+36delCCT
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3116
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2962
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28624
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47592
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: AAGG
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

11-10823560-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823560
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823560
    reference: chr 11
allele count: 1
allele frequency: 5.319148936170213e-3
allele num: 188
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+36T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4011T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+36T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+281T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+36T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+36T>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+36T>C
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3099
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3116
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47595
  bin: 2.5e0
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

11-10823560-AGGTTTAGAAAACATGC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823560
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823544
    reference: chr 11
allele count: 8
allele frequency: 4.25531914893617e-2
allele num: 188
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3116
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3099
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28622
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47595
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: AGGTTTAGAAAACATGC
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

11-10823561-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823561
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823561
    reference: chr 11
allele count: 2
allele frequency: 9.009009009009009e-3
allele num: 222
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+35C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+35C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+35C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+280C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4010C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+35C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+35C>T
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3116
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28617
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2962
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47590
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

11-10823561-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823561
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823561
    reference: chr 11
allele count: 1
allele frequency: 4.504504504504504e-3
allele num: 222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+35C>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4010C>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+35C>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+280C>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+35C>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+35C>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+35C>A
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3116
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2962
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28617
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47590
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

11-10823563-TTTAGAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823563
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823557
    reference: chr 11
allele count: 1
allele frequency: 9.803921568627451e-3
allele num: 102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+27_1299+32delTTCTAA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+27_1299+32delTTCTAA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+272_53+277delTTCTAA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+27_1299+32delTTCTAA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+27_1299+32delTTCTAA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4002_4007delTTCTAA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+27_1299+32delTTCTAA
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1797
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3100
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47660
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: TTTAGAA
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD

11-10823565-TAGAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823565
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823561
    reference: chr 11
allele count: 29
allele frequency: 2.400821246440162e-4
allele num: 120792
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4002_4005delTTCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+27_1299+30delTTCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+27_1299+30delTTCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+27_1299+30delTTCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+27_1299+30delTTCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+27_1299+30delTTCT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+272_53+275delTTCT
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 35682
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1435
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3040
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3172
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: TAGAA
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

11-10823567-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823567
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823567
    reference: chr 11
allele count: 127
allele frequency: 1.673695308381655e-2
allele num: 7588
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+29C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.4004C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+29C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+29C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+29C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+29C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+274C>T
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23252
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 7.5e0
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 1801
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 8.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 30181
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 8.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 4
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-10823573-A-ATTTGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823573
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823578
    reference: chr 11
allele count: 29
allele frequency: 2.301587301587301e-1
allele num: 126
alternate allele: ATTTGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+22_1299+23insACAAA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+22_1299+23insACAAA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+22_1299+23insACAAA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3997_3998insACAAA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+22_1299+23insACAAA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+267_53+268insACAAA
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+22_1299+23insACAAA
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20228
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 9.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26805
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

11-10823574-T-TGTGTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823574
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823579
    reference: chr 11
allele count: 1
allele frequency: 8.264462809917356e-6
allele num: 121000
alternate allele: TGTGTG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+21_1299+22insCACAC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+21_1299+22insCACAC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+21_1299+22insCACAC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+21_1299+22insCACAC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3996_3997insCACAC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+21_1299+22insCACAC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+266_53+267insCACAC
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39740
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2079
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54726
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD

11-10823575-G-GAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823575
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823577
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 88
alternate allele: GAA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3995_3996insTT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+20_1299+21insTT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+265_53+266insTT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+20_1299+21insTT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+20_1299+21insTT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+20_1299+21insTT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+20_1299+21insTT
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5816
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7178
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

11-10823581-T-TCCTAAAATAGTTTCATGTTTTAATAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823581
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823607
    reference: chr 11
allele count: 47
allele frequency: 1.451961692925548e-3
allele num: 32370
alternate allele: TCCTAAAATAGTTTCATGTTTTAATAG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14102
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7328
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14597
  bin: 9.75e1
  variant carriers: 51
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-10823581-T-TCCTAAAATAGTTTCATGTTTTAATAGCAAATGAAATCACATATATTGCATAATTTAACATTTGTTGCCTAAACACG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823581
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823657
    reference: chr 11
allele count: 1
allele frequency: 3.089280197713933e-5
allele num: 32370
alternate allele: TCCTAAAATAGTTTCATGTTTTAATAGCAAATGAAATCACATATATTGCATAATTTAACATTTGTTGCCTAAACACG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7328
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

11-10823582-C-CCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823582
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823584
    reference: chr 11
allele count: 1252
allele frequency: 5.537862703467799e-2
allele num: 22608
alternate allele: CCT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+13_1299+14insAG
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+13_1299+14insAG
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+13_1299+14insAG
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+258_53+259insAG
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3988_3989insAG
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+13_1299+14insAG
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+13_1299+14insAG
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 4.75e1
  variant carriers: 127
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 3.75e1
  variant carriers: 188
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 5.75e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 1.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 2.75e1
  variant carriers: 138
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 3.25e1
  variant carriers: 179
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.5e0
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 11901
  bin: 9.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 2.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.25e1
  variant carriers: 175
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 5.25e1
  variant carriers: 94
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 7.5e0
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 17277
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 6.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.25e1
  variant carriers: 3
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

11-10823582-C-CCTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823582
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823585
    reference: chr 11
allele count: 6616
allele frequency: 2.926397735314933e-1
allele num: 22608
alternate allele: CCTA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3988_3989insTAG
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+13_1299+14insTAG
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+13_1299+14insTAG
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+13_1299+14insTAG
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+258_53+259insTAG
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+13_1299+14insTAG
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+13_1299+14insTAG
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.5e0
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 11901
  bin: 9.75e1
  variant carriers: 233
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 2.25e1
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 4.75e1
  variant carriers: 837
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 5.25e1
  variant carriers: 777
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 3.25e1
  variant carriers: 517
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 177
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 1.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.25e1
  variant carriers: 435
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 5.75e1
  variant carriers: 639
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.25e1
  variant carriers: 838
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 8.75e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 3.75e1
  variant carriers: 764
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.25e1
  variant carriers: 243
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.75e1
  variant carriers: 371
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 2.75e1
  variant carriers: 289
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.25e1
  variant carriers: 119
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 9.25e1
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 6.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 7
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD

11-10823582-C-CCTAAAATAGTTTCATGTTTTAACAGCAAATG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823582
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823613
    reference: chr 11
allele count: 1
allele frequency: 4.423213021939137e-5
allele num: 22608
alternate allele: CCTAAAATAGTTTCATGTTTTAACAGCAAATG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11901
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9746
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17277
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-10823582-C-CCTAAAATAGTTTCATGTTTTAATAGCAAATG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823582
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823613
    reference: chr 11
allele count: 82
allele frequency: 3.627034677990092e-3
allele num: 22608
alternate allele: CCTAAAATAGTTTCATGTTTTAATAGCAAATG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11901
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9746
  bin: 9.75e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

11-10823584-A-AAATAGTTTCATGTTTTAATAGCAAATGAAATCACAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823584
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823620
    reference: chr 11
allele count: 940
allele frequency: 2.493104179927859e-2
allele num: 37704
alternate allele: AAATAGTTTCATGTTTTAATAGCAAATGAAATCACAT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 1.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 2.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 2.75e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 3.25e1
  variant carriers: 132
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 6.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 3.75e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 4.25e1
  variant carriers: 150
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 4.75e1
  variant carriers: 122
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 6.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 5.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 12027
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11157
  bin: 9.75e1
  variant carriers: 935
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 6.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

11-10823584-A-AAATAGTTTCATGTTTTAACAGCAAATGAAATCACAT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823584
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823620
    reference: chr 11
allele count: 2
allele frequency: 5.304476978569913e-5
allele num: 37704
alternate allele: AAATAGTTTCATGTTTTAACAGCAAATGAAATCACAT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12027
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9803
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

11-10823584-A-AAATAGTTTCATGTTTTAATAGCAAATGAAATCAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823584
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823618
    reference: chr 11
allele count: 292
allele frequency: 7.744536388712073e-3
allele num: 37704
alternate allele: AAATAGTTTCATGTTTTAATAGCAAATGAAATCAC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 1.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 4.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 2.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 5.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 12027
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 3.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 4.25e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 3.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9803
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
reference allele: A
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-10823586-TATTA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823586
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823582
    reference: chr 11
allele count: 1
allele frequency: 8.684777322309456e-6
allele num: 115144
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+6_1299+9delTAAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+6_1299+9delTAAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3981_3984delTAAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+6_1299+9delTAAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+6_1299+9delTAAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+6_1299+9delTAAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+251_53+254delTAAT
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2548
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34858
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45499
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2800
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1446
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1299+6_1299+9delTAAT
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: TATTA
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-10823587-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823587
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823588
    reference: chr 11
allele count: 1
allele frequency: 2.27396761870111e-5
allele num: 43976
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+8_1299+9insC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3983_3984insC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+8_1299+9insC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+253_53+254insC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+8_1299+9insC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+8_1299+9insC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+8_1299+9insC
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36627
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37950
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD

11-10823587-A-AGTTTCATGTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823587
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823597
    reference: chr 11
allele count: 6549
allele frequency: 1.489221393487357e-1
allele num: 43976
alternate allele: AGTTTCATGTT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 2.75e1
  variant carriers: 156
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.75e1
  variant carriers: 762
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 7.25e1
  variant carriers: 284
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 2.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 3.75e1
  variant carriers: 574
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 9.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 5.25e1
  variant carriers: 813
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 6.75e1
  variant carriers: 411
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 3.25e1
  variant carriers: 367
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 8.25e1
  variant carriers: 136
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 4.25e1
  variant carriers: 851
genotype depth: GenotypeDepth
  all individuals: 36627
  bin: 9.75e1
  variant carriers: 269
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 8.75e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 7.75e1
  variant carriers: 209
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.75e1
  variant carriers: 880
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 6.25e1
  variant carriers: 552
genotype quality: GenotypeQuality
  all individuals: 37950
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-10823587-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823587
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823587
    reference: chr 11
allele count: 1
allele frequency: 2.27396761870111e-5
allele num: 43976
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3984T>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+254T>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+9T>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+9T>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+9T>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+9T>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+9T>G
  variant of: http://identifiers.org/hgnc/3297
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36627
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1837
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37950
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-10823588-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823588
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823588
    reference: chr 11
allele count: 68
allele frequency: 8.251626055722746e-4
allele num: 82408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3983A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+8A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+8A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+8A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+8A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+8A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+253A>C
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35154
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 35694
  bin: 9.75e1
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14491
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 4.75e1
  variant carriers: 2
hgvs: c.1299+8A>C
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

11-10823589-T-TTCATGTTTTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823589
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823599
    reference: chr 11
allele count: 1
allele frequency: 2.236936292054402e-5
allele num: 44704
alternate allele: TTCATGTTTTA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37164
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14315
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37519
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1299+6_1299+7insTAAAACATGA
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

11-10823589-TAC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823589
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823587
    reference: chr 11
allele count: 62
allele frequency: 1.386900501073729e-3
allele num: 44704
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+5_1299+6delGT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+250_53+251delGT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+5_1299+6delGT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+5_1299+6delGT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+5_1299+6delGT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+5_1299+6delGT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3980_3981delGT
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 37164
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1923
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1289
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14315
  bin: 9.75e1
  variant carriers: 52
hgvs: c.1299+5_1299+6delGT
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: TAC
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

11-10823590-A-AATAGCAAATGAAATCACATATATTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823590
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823615
    reference: chr 11
allele count: 4976
allele frequency: 4.950652658389048e-2
allele num: 100512
alternate allele: AATAGCAAATGAAATCACATATATTG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 2.75e1
  variant carriers: 124
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 3.25e1
  variant carriers: 295
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 3.75e1
  variant carriers: 431
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 5.25e1
  variant carriers: 655
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 6.25e1
  variant carriers: 445
genotype depth: GenotypeDepth
  all individuals: 36782
  bin: 9.75e1
  variant carriers: 192
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 2.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 9.25e1
  variant carriers: 53
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 7.75e1
  variant carriers: 157
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 5.75e1
  variant carriers: 569
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 4.75e1
  variant carriers: 685
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 6.75e1
  variant carriers: 296
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 7.25e1
  variant carriers: 200
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 8.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 4.25e1
  variant carriers: 652
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 8.25e1
  variant carriers: 100
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 45016
  bin: 9.75e1
  variant carriers: 4922
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 9
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

11-10823590-A-AATAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823590
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823594
    reference: chr 11
allele count: 1513
allele frequency: 1.505292900350207e-2
allele num: 100512
alternate allele: AATAG
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3980_3981insCTAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+5_1299+6insCTAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+5_1299+6insCTAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+5_1299+6insCTAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+5_1299+6insCTAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+5_1299+6insCTAT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+250_53+251insCTAT
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 8.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 3.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 8.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 2394
  bin: 9.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 3.75e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 1471
  bin: 2.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 4.75e1
  variant carriers: 182
genotype depth: GenotypeDepth
  all individuals: 36782
  bin: 9.75e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 7.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 6.75e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 4.25e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 6.25e1
  variant carriers: 130
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 7.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 5.25e1
  variant carriers: 206
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 5.75e1
  variant carriers: 193
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 6
hgvs: c.1299+5_1299+6insCTAT
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

11-10823591-C-CAAATGAAATCACATATA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823591
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823608
    reference: chr 11
allele count: 1470
allele frequency: 1.368205510052122e-1
allele num: 10744
alternate allele: CAAATGAAATCACATATA
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 7.75e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 6.25e1
  variant carriers: 149
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 8.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 4.25e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 9.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 6.75e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 3.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 3.75e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35306
  bin: 9.75e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 8.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 5.75e1
  variant carriers: 189
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 4.75e1
  variant carriers: 177
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.25e1
  variant carriers: 198
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 7.25e1
  variant carriers: 104
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54236
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 7.5e0
  variant carriers: 1
hgvs: c.1299+4_1299+5insTATATGTGATTTCATTT
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-10823591-C-CAGCAAATGAAATCACATATA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823591
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823611
    reference: chr 11
allele count: 1
allele frequency: 9.307520476545048e-5
allele num: 10744
alternate allele: CAGCAAATGAAATCACATATA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35306
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 2.25e1
  variant carriers: 0
hgvs: c.1299+4_1299+5insTATATGTGATTTCATTTGCT
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD

11-10823592-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823592
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823592
    reference: chr 11
allele count: 3782
allele frequency: 1.762184325785109e-1
allele num: 21462
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+4A>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3979A>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+4A>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+4A>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+249A>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+4A>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+4A>T
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: splice region
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 2.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 35451
  bin: 9.75e1
  variant carriers: 192
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 6.75e1
  variant carriers: 299
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 4.25e1
  variant carriers: 360
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 3.25e1
  variant carriers: 111
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 7.25e1
  variant carriers: 203
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 6.25e1
  variant carriers: 439
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 8.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 3.75e1
  variant carriers: 234
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.75e1
  variant carriers: 488
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 4.75e1
  variant carriers: 478
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 5.25e1
  variant carriers: 530
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 9.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 1906
  bin: 7.75e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 8.25e1
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7171
  bin: 9.75e1
  variant carriers: 3777
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
hgvs: c.1299+4A>T
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-10823593-T-TGCAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823593
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823597
    reference: chr 11
allele count: 1471
allele frequency: 8.570263341878349e-2
allele num: 17164
alternate allele: TGCAG
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+2_1299+3insCTGC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+2_1299+3insCTGC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3977_3978insCTGC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+2_1299+3insCTGC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+247_53+248insCTGC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+2_1299+3insCTGC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+2_1299+3insCTGC
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 3.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 7.25e1
  variant carriers: 105
genotype depth: GenotypeDepth
  all individuals: 38073
  bin: 9.75e1
  variant carriers: 119
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.75e1
  variant carriers: 198
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 6.75e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 4.25e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 7.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.75e1
  variant carriers: 180
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.25e1
  variant carriers: 181
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 3.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 6.25e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 2753
  bin: 8.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 8.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 9.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51400
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
hgvs: c.1299+2_1299+3insCTGC
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-10823593-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823593
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823592
    reference: chr 11
allele count: 62
allele frequency: 3.61221160568632e-3
allele num: 17164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3977delT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299+2delT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+247delT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299+2delT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299+2delT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299+2delT
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299+2delT
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: splice donor
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2753
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2911
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38073
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51400
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 3.25e1
  variant carriers: 2
hgvs: c.1299+2delT
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: TA
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ

http://identifiers.org/exac.variant/11-10823596-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823596
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823596
    reference: chr 11
allele count: 62
allele frequency: 6.195043964828137e-3
allele num: 10008
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1299G>T
  hgvsp: ENSP00000379778.2:p.Gln433His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1299G>T
  hgvsp: ENSP00000431583.1:p.Gln433His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1299G>T
  hgvsp: ENSP00000433664.1:p.Gln433His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1299G>T
  hgvsp: ENSP00000340281.5:p.Gln433His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1299G>T
  hgvsp: ENSP00000433371.1:p.Gln433His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3975G>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+245G>T
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: missense
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2785
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 39047
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54913
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.25e1
  variant carriers: 1
hgvs: p.Gln433His
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

11-10823598-GGC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823598
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823596
    reference: chr 11
allele count: 57
allele frequency: 3.149867374005305e-3
allele num: 18096
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1295_1296delGC
  hgvsp: ENSP00000433371.1:p.Ser432ThrfsTer9
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+241_53+242delGC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1295_1296delGC
  hgvsp: ENSP00000379778.2:p.Ser432ThrfsTer3
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3971_3972delGC
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1295_1296delGC
  hgvsp: ENSP00000431583.1:p.Ser432ThrfsTer3
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1295_1296delGC
  hgvsp: ENSP00000433664.1:p.Ser432ThrfsTer9
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1295_1296delGC
  hgvsp: ENSP00000340281.5:p.Ser432ThrfsTer9
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39389
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50809
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 1.25e1
  variant carriers: 2
hgvs: p.Ser432ThrfsTer9
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: GGC
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum

11-10823599-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823599
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823599
    reference: chr 11
allele count: 1
allele frequency: 1.086318899776218e-5
allele num: 92054
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1296C>T
  hgvsp: ENST00000339995.5:c.1296C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+242C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1296C>T
  hgvsp: ENST00000396525.2:c.1296C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1296C>T
  hgvsp: ENST00000525681.1:c.1296C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1296C>T
  hgvsp: ENST00000526148.1:c.1296C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1296C>T
  hgvsp: ENST00000531416.1:c.1296C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3972C>T
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42170
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1760
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser432Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/11-10823605-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823605
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823605
    reference: chr 11
allele count: 57
allele frequency: 1.397058823529412e-3
allele num: 40800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1290G>T
  hgvsp: ENSP00000431583.1:p.Met430Ile
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3966G>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1290G>T
  hgvsp: ENSP00000433664.1:p.Met430Ile
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1290G>T
  hgvsp: ENSP00000379778.2:p.Met430Ile
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1290G>T
  hgvsp: ENSP00000340281.5:p.Met430Ile
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1290G>T
  hgvsp: ENSP00000433371.1:p.Met430Ile
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+236G>T
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40436
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2305
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 39266
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 4.75e1
  variant carriers: 1
hgvs: p.Met430Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP

11-10823616-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823616
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823616
    reference: chr 11
allele count: 1
allele frequency: 1.432213342499499e-5
allele num: 69822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1279G>A
  hgvsp: ENSP00000340281.5:p.Gly427Ser
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1279G>A
  hgvsp: ENSP00000431583.1:p.Gly427Ser
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1279G>A
  hgvsp: ENSP00000379778.2:p.Gly427Ser
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3955G>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+225G>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1279G>A
  hgvsp: ENSP00000433371.1:p.Gly427Ser
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*276G>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1279G>A
  hgvsp: ENSP00000433664.1:p.Gly427Ser
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34366
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2501
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3796
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3048
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2140
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1686
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly427Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-10823623-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823623
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823623
    reference: chr 11
allele count: 15
allele frequency: 1.441919483216057e-4
allele num: 104028
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1272G>A
  hgvsp: ENST00000531416.1:c.1272G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1272G>A
  hgvsp: ENST00000339995.5:c.1272G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*269G>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3948G>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1272G>A
  hgvsp: ENST00000525681.1:c.1272G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1272G>A
  hgvsp: ENST00000396525.2:c.1272G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1272G>A
  hgvsp: ENST00000526148.1:c.1272G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+218G>A
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4258
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27771
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2929
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2814
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu424Glu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum

11-10823635-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823635
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823635
    reference: chr 11
allele count: 580
allele frequency: 4.800370787260809e-3
allele num: 120824
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1260G>A
  hgvsp: ENST00000396525.2:c.1260G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+206G>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1260G>A
  hgvsp: ENST00000526148.1:c.1260G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1260G>A
  hgvsp: ENST00000525681.1:c.1260G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3936G>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1260G>A
  hgvsp: ENST00000339995.5:c.1260G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*257G>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1260G>A
  hgvsp: ENST00000531416.1:c.1260G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 8.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2890
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 8.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 7.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 2880
  bin: 6.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24003
  bin: 9.75e1
  variant carriers: 388
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4467
  bin: 9.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 3888
  bin: 7.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8700
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4696
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3511
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser420Ser
num of homozygotes: 4
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD

11-10823636-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823636
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823636
    reference: chr 11
allele count: 3
allele frequency: 2.499208583948416e-5
allele num: 120038
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3935C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1259C>T
  hgvsp: ENSP00000433371.1:p.Ser420Leu
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1259C>T
  hgvsp: ENSP00000379778.2:p.Ser420Leu
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1259C>T
  hgvsp: ENSP00000431583.1:p.Ser420Leu
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1259C>T
  hgvsp: ENSP00000433664.1:p.Ser420Leu
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+205C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*256C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1259C>T
  hgvsp: ENSP00000340281.5:p.Ser420Leu
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2894
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4469
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23837
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4465
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4380
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8692
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser420Leu
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP

http://identifiers.org/exac.variant/11-10823637-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823637
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823637
    reference: chr 11
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1258T>G
  hgvsp: ENSP00000340281.5:p.Ser420Ala
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+204T>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*255T>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1258T>G
  hgvsp: ENSP00000431583.1:p.Ser420Ala
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1258T>G
  hgvsp: ENSP00000433371.1:p.Ser420Ala
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1258T>G
  hgvsp: ENSP00000433664.1:p.Ser420Ala
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1258T>G
  hgvsp: ENSP00000379778.2:p.Ser420Ala
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3934T>G
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3909
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2897
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4460
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4466
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3461
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23803
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8719
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4704
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3167
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser420Ala
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

11-10823638-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823638
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823638
    reference: chr 11
allele count: 4
allele frequency: 3.311203456896409e-5
allele num: 120802
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1257A>G
  hgvsp: ENST00000525681.1:c.1257A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1257A>G
  hgvsp: ENST00000531416.1:c.1257A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1257A>G
  hgvsp: ENST00000339995.5:c.1257A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*254A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1257A>G
  hgvsp: ENST00000526148.1:c.1257A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1257A>G
  hgvsp: ENST00000396525.2:c.1257A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+203A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3933A>G
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4376
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23802
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3837
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6026
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25863
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Gln419Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD

11-10823648-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823648
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823648
    reference: chr 11
allele count: 1
allele frequency: 8.267332462507647e-6
allele num: 120958
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1247C>T
  hgvsp: ENSP00000433664.1:p.Pro416Leu
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1247C>T
  hgvsp: ENSP00000431583.1:p.Pro416Leu
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3923C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+193C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*244C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1247C>T
  hgvsp: ENSP00000340281.5:p.Pro416Leu
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1247C>T
  hgvsp: ENSP00000433371.1:p.Pro416Leu
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1247C>T
  hgvsp: ENSP00000379778.2:p.Pro416Leu
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3455
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23794
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4378
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3561
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4733
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4448
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro416Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

11-10823655-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823655
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823655
    reference: chr 11
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1240A>T
  hgvsp: ENSP00000340281.5:p.Ile414Phe
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3916A>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1240A>T
  hgvsp: ENSP00000431583.1:p.Ile414Phe
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1240A>T
  hgvsp: ENSP00000433371.1:p.Ile414Phe
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+186A>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1240A>T
  hgvsp: ENSP00000379778.2:p.Ile414Phe
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1240A>T
  hgvsp: ENSP00000433664.1:p.Ile414Phe
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*237A>T
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3455
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23793
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25929
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3573
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile414Phe
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

11-10823656-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823656
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823656
    reference: chr 11
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+185C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*236C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1239C>T
  hgvsp: ENST00000339995.5:c.1239C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1239C>T
  hgvsp: ENST00000531416.1:c.1239C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1239C>T
  hgvsp: ENST00000525681.1:c.1239C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1239C>T
  hgvsp: ENST00000396525.2:c.1239C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3915C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1239C>T
  hgvsp: ENST00000526148.1:c.1239C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23792
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4749
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4466
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6089
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His413His
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

http://identifiers.org/exac.variant/11-10823664-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823664
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823664
    reference: chr 11
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+177G>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1231G>T
  hgvsp: ENSP00000433664.1:p.Gly411Trp
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1231G>T
  hgvsp: ENSP00000433371.1:p.Gly411Trp
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1231G>T
  hgvsp: ENSP00000340281.5:p.Gly411Trp
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3907G>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1231G>T
  hgvsp: ENSP00000431583.1:p.Gly411Trp
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1231G>T
  hgvsp: ENSP00000379778.2:p.Gly411Trp
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*228G>T
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3456
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23792
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4463
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4380
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3190
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6090
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly411Trp
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

11-10823672-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823672
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823672
    reference: chr 11
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1223A>G
  hgvsp: ENSP00000379778.2:p.Asn408Ser
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3899A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1223A>G
  hgvsp: ENSP00000340281.5:p.Asn408Ser
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1223A>G
  hgvsp: ENSP00000431583.1:p.Asn408Ser
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+169A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1223A>G
  hgvsp: ENSP00000433371.1:p.Asn408Ser
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*220A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1223A>G
  hgvsp: ENSP00000433664.1:p.Asn408Ser
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23793
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4747
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25950
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6091
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3898
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn408Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

11-10823680-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823680
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823680
    reference: chr 11
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1215A>C
  hgvsp: ENSP00000379778.2:p.Gln405His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3891A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1215A>C
  hgvsp: ENSP00000433371.1:p.Gln405His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*212A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+161A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1215A>C
  hgvsp: ENSP00000431583.1:p.Gln405His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1215A>C
  hgvsp: ENSP00000340281.5:p.Gln405His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1215A>C
  hgvsp: ENSP00000433664.1:p.Gln405His
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23792
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6089
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3190
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gln405His
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

11-10823685-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823685
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823685
    reference: chr 11
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1210A>G
  hgvsp: ENSP00000431583.1:p.Asn404Asp
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3886A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1210A>G
  hgvsp: ENSP00000433371.1:p.Asn404Asp
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1210A>G
  hgvsp: ENSP00000433664.1:p.Asn404Asp
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1210A>G
  hgvsp: ENSP00000340281.5:p.Asn404Asp
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+156A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*207A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1210A>G
  hgvsp: ENSP00000379778.2:p.Asn404Asp
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4380
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23794
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3190
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3574
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn404Asp
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

11-10823685-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823685
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823685
    reference: chr 11
allele count: 8
allele frequency: 6.589460158476517e-5
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3886A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1210A>C
  hgvsp: ENSP00000433371.1:p.Asn404His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*207A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1210A>C
  hgvsp: ENSP00000433664.1:p.Asn404His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+156A>C
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1210A>C
  hgvsp: ENSP00000379778.2:p.Asn404His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1210A>C
  hgvsp: ENSP00000340281.5:p.Asn404His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1210A>C
  hgvsp: ENSP00000431583.1:p.Asn404His
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4380
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3459
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23794
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3574
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asn404His
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-10823690-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823690
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823690
    reference: chr 11
allele count: 3
allele frequency: 2.471128976458378e-5
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1205G>A
  hgvsp: ENSP00000433664.1:p.Arg402His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+151G>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1205G>A
  hgvsp: ENSP00000340281.5:p.Arg402His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1205G>A
  hgvsp: ENSP00000431583.1:p.Arg402His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*202G>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1205G>A
  hgvsp: ENSP00000433371.1:p.Arg402His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3881G>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1205G>A
  hgvsp: ENSP00000379778.2:p.Arg402His
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23793
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6087
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3574
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4467
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg402His
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

11-10823696-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823696
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823696
    reference: chr 11
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1199G>A
  hgvsp: ENSP00000431583.1:p.Arg400His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3875G>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1199G>A
  hgvsp: ENSP00000379778.2:p.Arg400His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1199G>A
  hgvsp: ENSP00000340281.5:p.Arg400His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*196G>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1199G>A
  hgvsp: ENSP00000433371.1:p.Arg400His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1199G>A
  hgvsp: ENSP00000433664.1:p.Arg400His
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+145G>A
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23793
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6086
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8765
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg400His
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD

11-10823701-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823701
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823701
    reference: chr 11
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1194G>A
  hgvsp: ENSP00000340281.5:p.Met398Ile
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1194G>A
  hgvsp: ENSP00000431583.1:p.Met398Ile
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3870G>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1194G>A
  hgvsp: ENSP00000433371.1:p.Met398Ile
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*191G>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1194G>A
  hgvsp: ENSP00000433664.1:p.Met398Ile
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1194G>A
  hgvsp: ENSP00000379778.2:p.Met398Ile
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+140G>A
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23793
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3190
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25956
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met398Ile
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: QD

11-10823707-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823707
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823707
    reference: chr 11
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1188C>A
  hgvsp: ENST00000396525.2:c.1188C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*185C>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1188C>A
  hgvsp: ENST00000531416.1:c.1188C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1188C>A
  hgvsp: ENST00000525681.1:c.1188C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1188C>A
  hgvsp: ENST00000526148.1:c.1188C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3864C>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+134C>A
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1188C>A
  hgvsp: ENST00000339995.5:c.1188C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4469
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23793
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3190
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8766
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4467
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro396Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD

http://identifiers.org/exac.variant/11-10823712-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823712
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823712
    reference: chr 11
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+129T>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1183T>G
  hgvsp: ENSP00000379778.2:p.Ser395Ala
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1183T>G
  hgvsp: ENSP00000433371.1:p.Ser395Ala
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1183T>G
  hgvsp: ENSP00000340281.5:p.Ser395Ala
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1183T>G
  hgvsp: ENSP00000431583.1:p.Ser395Ala
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1183T>G
  hgvsp: ENSP00000433664.1:p.Ser395Ala
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3859T>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*180T>G
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4380
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4467
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2900
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23792
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser395Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: A
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

11-10823752-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823752
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823752
    reference: chr 11
allele count: 2
allele frequency: 1.647935137272997e-5
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1143C>T
  hgvsp: ENST00000531416.1:c.1143C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1143C>T
  hgvsp: ENST00000396525.2:c.1143C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1143C>T
  hgvsp: ENST00000525681.1:c.1143C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+89C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3819C>T
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1143C>T
  hgvsp: ENST00000339995.5:c.1143C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1143C>T
  hgvsp: ENST00000526148.1:c.1143C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*140C>T
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3458
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4467
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23793
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6057
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3187
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser381Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

11-10823764-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 10823764
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 10823764
    reference: chr 11
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532383
  gene symbol: EIF4G2
  hgvsc: ENST00000532383.1:n.3815-8A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433664
  ensembl transcript: ENST00000526148
  gene symbol: EIF4G2
  hgvsc: ENST00000526148.1:c.1139-8A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000431583
  ensembl transcript: ENST00000531416
  gene symbol: EIF4G2
  hgvsc: ENST00000531416.1:c.1139-8A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000379778
  ensembl transcript: ENST00000396525
  gene symbol: EIF4G2
  hgvsc: ENST00000396525.2:c.1139-8A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433217
  ensembl transcript: ENST00000531647
  gene symbol: EIF4G2
  hgvsc: ENST00000531647.1:c.*136-8A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000433371
  ensembl transcript: ENST00000525681
  gene symbol: EIF4G2
  hgvsc: ENST00000525681.1:c.1139-8A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl protein: ENSP00000340281
  ensembl transcript: ENST00000339995
  gene symbol: EIF4G2
  hgvsc: ENST00000339995.5:c.1139-8A>G
  variant of: http://identifiers.org/hgnc/3297
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000110321
  ensembl transcript: ENST00000532120
  gene symbol: EIF4G2
  hgvsc: ENST00000532120.1:n.53+77A>G
  variant of: http://identifiers.org/hgnc/3297
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4461
  bin: 9.25e1
  variant carriers: 0
hgvs: c.1139-8A>G
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 59
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8938
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3947
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3404
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23139
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8450
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.057302077654612e-5
allele num: 66036
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.105e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 8.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.04e-1

DP
type: SiteQuality
SIO_000300: 2.005458e6

MQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

QD
type: SiteQuality
SIO_000300: 1.315e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.03e-1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 8936
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.215953307392996e-4
allele num: 16448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.056935190793458e-5
allele num: 66040
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.518833535844471e-4
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.744316194473592e-5
allele num: 11436
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 8.828722778104767e-4
allele num: 10194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 8.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e-1

MQ
type: SiteQuality
SIO_000300: 5.865e1

DP
type: SiteQuality
SIO_000300: 2.005061e6

VQSLOD
type: SiteQuality
SIO_000300: 9.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.434e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-2

QD
type: SiteQuality
SIO_000300: 1.341e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1903
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variant carriers: 0

GenotypeQuality
all individuals: 8900
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8256
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.804366966015144e-5
allele num: 11358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.833e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.664e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.59e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.159999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.004e0

QD
type: SiteQuality
SIO_000300: 4.03e0

MQ
type: SiteQuality
SIO_000300: 5.414e1

DP
type: SiteQuality
SIO_000300: 1.915727e6

GenotypeQuality
all individuals: 3844
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2230
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8896
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variant carriers: 3

GenotypeQuality
all individuals: 1131
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.062224399804018e-5
allele num: 65312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8214
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.837044892188053e-5
allele num: 11316
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10084
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.718e0

DP
type: SiteQuality
SIO_000300: 1.89799e6

FS
type: SiteQuality
SIO_000300: 2.267e0

MQRankSum
type: SiteQuality
SIO_000300: -6.3e-2

MQ
type: SiteQuality
SIO_000300: 5.889e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-1

QD
type: SiteQuality
SIO_000300: 3.498e1

GenotypeQuality
all individuals: 2504
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1307
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6973
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variant carriers: 0

GenotypeQuality
all individuals: 199
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variant carriers: 0

GenotypeQuality
all individuals: 815
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variant carriers: 0

GenotypeQuality
all individuals: 8885
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4628
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variant carriers: 0

GenotypeQuality
all individuals: 1724
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533366045142296e-5
allele num: 65216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10066
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8194
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16382
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.68e-1

DP
type: SiteQuality
SIO_000300: 1.890862e6

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.829e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.003e0

VQSLOD
type: SiteQuality
SIO_000300: -2.864e0

QD
type: SiteQuality
SIO_000300: 1.407e1

GenotypeQuality
all individuals: 1994
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2496
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8870
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3607
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GenotypeQuality
all individuals: 1879
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.624206177939454e-5
allele num: 64876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11256
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8094
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.41e-1

DP
type: SiteQuality
SIO_000300: 1.862956e6

MQ
type: SiteQuality
SIO_000300: 5.874e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.165e0

MQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

FS
type: SiteQuality
SIO_000300: 5.872e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.058e1

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 75
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variant carriers: 22

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 5.0e-1
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.333333333333333e-1
allele num: 6
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 9.615384615384616e-3
allele num: 312
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 1.176470588235294e-1
allele num: 34
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.25e-1
allele num: 96
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.764e1

VQSLOD
type: SiteQuality
SIO_000300: 2.735e1

DP
type: SiteQuality
SIO_000300: 5.094318e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.399e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.278e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.039e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.668e0

MQ
type: SiteQuality
SIO_000300: 4.363e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 510
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10032
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65808
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14858
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.463803255975061e-4
allele num: 11548
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.299411e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.87e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e0

QD
type: SiteQuality
SIO_000300: 1.293e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.29e-2

MQ
type: SiteQuality
SIO_000300: 4.326e1

VQSLOD
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SIO_000300: -1.589e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 5.0e-1
allele num: 4
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.571428571428572e-2
allele num: 70
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.299e-1

DP
type: SiteQuality
SIO_000300: 5.356917e6

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.56e-1

BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 2.22e0

MQ
type: SiteQuality
SIO_000300: 4.732e1

VQSLOD
type: SiteQuality
SIO_000300: 5.36e-1

QD
type: SiteQuality
SIO_000300: 3.102e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.0e-2
allele num: 50
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.088e1

MQ
type: SiteQuality
SIO_000300: 4.148e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.49e-1

DP
type: SiteQuality
SIO_000300: 5.357333e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.003e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 553
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variant carriers: 0

GenotypeQuality
all individuals: 126
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GenotypeQuality
all individuals: 233
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 505
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variant carriers: 0

GenotypeQuality
all individuals: 53161
bin: 9.75e1
variant carriers: 29

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.114484216885667e-4
allele num: 66210
num of homozygotes: 0

African
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allele count: 3
allele frequency: 2.94233032561789e-4
allele num: 10196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.313208420078649e-4
allele num: 8646
num of homozygotes: 0

Latino
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allele count: 7
allele frequency: 6.052222030088189e-4
allele num: 11566
num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 1.900177349885989e-4
allele num: 15788
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.376e0

ClippingRankSum
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SIO_000300: -4.92e-1

ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 8.555999999999999e0

MQ
type: SiteQuality
SIO_000300: 4.313e1

BaseQRankSum
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SIO_000300: -2.03e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.316e0

DP
type: SiteQuality
SIO_000300: 5.71536e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

QD
type: SiteQuality
SIO_000300: 2.943e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

European (Finnish)
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allele count: 2
allele frequency: 3.024803387779795e-4
allele num: 6612
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15788
num of homozygotes: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 9.062075215224287e-5
allele num: 66210
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

VQSLOD
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

MQRankSum
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DP
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SIO_000300: 5.71536e6

FS
type: SiteQuality
SIO_000300: 8.555999999999999e0

ReadPosRankSum
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SIO_000300: -3.21e0

MQ
type: SiteQuality
SIO_000300: 4.313e1

QD
type: SiteQuality
SIO_000300: 2.943e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66210
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.333924499619965e-5
allele num: 15788
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.71536e6

QD
type: SiteQuality
SIO_000300: 2.943e1

FS
type: SiteQuality
SIO_000300: 8.555999999999999e0

MQRankSum
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SIO_000300: -3.316e0

MQ
type: SiteQuality
SIO_000300: 4.313e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.92e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.376e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.21e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 7
allele frequency: 2.1875e-1
allele num: 32
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

African
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allele count: 3
allele frequency: 2.542372881355932e-2
allele num: 118
num of homozygotes: 0

European (Non-Finnish)
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allele count: 14
allele frequency: 1.666666666666667e-1
allele num: 84
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.333333333333333e-1
allele num: 6
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 5.0e-1
allele num: 6
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.69e-1

FS
type: SiteQuality
SIO_000300: 1.4146e1

MQRankSum
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SIO_000300: -3.685e0

DP
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ReadPosRankSum
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SIO_000300: -3.102e0

InbreedingCoeff
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SIO_000300: -3.297e-1

MQ
type: SiteQuality
SIO_000300: 4.043e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.2e-2

QD
type: SiteQuality
SIO_000300: 3.166e1

VQSLOD
type: SiteQuality
SIO_000300: -3.017e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.083333333333333e-2
allele num: 48
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.127e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.802e-1

DP
type: SiteQuality
SIO_000300: 5.854985e6

MQ
type: SiteQuality
SIO_000300: 4.279e1

MQRankSum
type: SiteQuality
SIO_000300: -3.582e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.276e0

FS
type: SiteQuality
SIO_000300: 1.372e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.878e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.99e-1

QD
type: SiteQuality
SIO_000300: 4.24e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 5.0e-1
allele num: 4
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.25e-1
allele num: 48
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.372e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.127e-1

QD
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MQRankSum
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DP
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SIO_000300: 5.854985e6

BaseQRankSum
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ReadPosRankSum
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 4.279e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.99e-1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

Other
type: Population
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allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.941176470588235e-2
allele num: 68
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

VQSLOD
type: SiteQuality
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QD
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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FS
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MQ
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DP
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
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South Asian
type: Population
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allele frequency: 0.0e0
allele num: 4
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Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
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European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.470588235294118e-2
allele num: 68
num of homozygotes: 0

MQ
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SIO_000300: 4.406e1

InbreedingCoeff
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BaseQRankSum
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MQRankSum
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VQSLOD
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FS
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ClippingRankSum
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DP
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.941176470588235e-2
allele num: 34
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African
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East Asian
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allele frequency: NaN
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele num: 8
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South Asian
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QD
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SIO_000300: 1.283e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.301e-1

MQ
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FS
type: SiteQuality
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 3
allele frequency: 1.841394549472134e-4
allele num: 16292
num of homozygotes: 0

African
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allele count: 3
allele frequency: 2.911490683229814e-4
allele num: 10304
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
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Other
type: Population
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Latino
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allele frequency: 6.048038707447727e-4
allele num: 11574
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European (Non-Finnish)
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allele count: 14
allele frequency: 2.106213329321498e-4
allele num: 66470
num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 2.313743637204998e-4
allele num: 8644
num of homozygotes: 0

DP
type: SiteQuality
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ClippingRankSum
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FS
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InbreedingCoeff
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MQRankSum
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VQSLOD
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BaseQRankSum
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QD
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MQ
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 60
allele frequency: 7.407407407407407e-2
allele num: 810
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 532
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

African
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allele frequency: 2.857142857142857e-3
allele num: 700
num of homozygotes: 0

Other
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allele frequency: 3.03030303030303e-2
allele num: 66
num of homozygotes: 0

European (Non-Finnish)
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allele count: 63
allele frequency: 1.548672566371681e-2
allele num: 4068
num of homozygotes: 0

VQSLOD
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SIO_000300: 3.25e0

InbreedingCoeff
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SIO_000300: 4.22e-1

MQRankSum
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ClippingRankSum
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MQ
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QD
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FS
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DP
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: 3.22e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 14
allele frequency: 3.043478260869565e-1
allele num: 46
num of homozygotes: 0

Other
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allele frequency: NaN
allele num: 0
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East Asian
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allele count: 2
allele frequency: 5.0e-1
allele num: 4
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 5.0e-1
allele num: 6
num of homozygotes: 0

Latino
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allele frequency: 1.521739130434783e-1
allele num: 46
num of homozygotes: 0

African
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allele count: 3
allele frequency: 1.25e-1
allele num: 24
num of homozygotes: 0

DP
type: SiteQuality
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MQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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SIO_000300: 1.174e-1

BaseQRankSum
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ReadPosRankSum
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FS
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QD
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ClippingRankSum
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SIO_000300: -1.15e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
allele num: 10348
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Latino
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allele frequency: 0.0e0
allele num: 11556
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European (Non-Finnish)
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allele frequency: 1.503985561738607e-5
allele num: 66490
num of homozygotes: 0

ReadPosRankSum
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SIO_000300: -1.202e0

BaseQRankSum
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MQRankSum
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InbreedingCoeff
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SIO_000300: -1.0e-4

FS
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SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: 1.45e0

MQ
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SIO_000300: 4.501e1

QD
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DP
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VQSLOD
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SIO_000300: 1.49e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: NaN
allele num: 0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 20
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East Asian
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 24
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European (Finnish)
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allele frequency: NaN
allele num: 0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4
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Latino
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allele num: 38
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DP
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VQSLOD
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SIO_000300: 1.69e0

QD
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FS
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MQ
type: SiteQuality
SIO_000300: 2.996e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.194e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 12
allele frequency: 3.218884120171674e-3
allele num: 3728
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 32
allele frequency: 1.816942993413582e-3
allele num: 17612
num of homozygotes: 0

European (Finnish)
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allele frequency: 2.977963073257892e-4
allele num: 3358
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Latino
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

East Asian
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allele count: 2
allele frequency: 5.506607929515419e-4
allele num: 3632
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e0

BaseQRankSum
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SIO_000300: 1.93e0

MQRankSum
type: SiteQuality
SIO_000300: -1.683e0

QD
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SIO_000300: 2.24e0

FS
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SIO_000300: 0.0e0

VQSLOD
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SIO_000300: -1.875e0

MQ
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SIO_000300: 4.811e1

DP
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SIO_000300: 6.601771e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-2

ClippingRankSum
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SIO_000300: -6.899999999999999e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3358
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 2.75330396475771e-4
allele num: 3632
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 17612
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3488
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.74e0

MQ
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SIO_000300: 4.811e1

BaseQRankSum
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SIO_000300: 1.93e0

MQRankSum
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SIO_000300: -1.683e0

FS
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SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: 5.3e-2

DP
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SIO_000300: 6.601771e6

VQSLOD
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SIO_000300: -1.875e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

QD
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SIO_000300: 2.24e0

GenotypeQuality
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variant carriers: 5

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 116
allele frequency: 4.769736842105263e-2
allele num: 2432
num of homozygotes: 0

Latino
type: Population
allele count: 134
allele frequency: 6.673306772908366e-2
allele num: 2008
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 60
allele frequency: 6.976744186046512e-2
allele num: 860
num of homozygotes: 0

Other
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allele count: 6
allele frequency: 4.838709677419355e-2
allele num: 124
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South Asian
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allele frequency: 2.868217054263566e-2
allele num: 2580
num of homozygotes: 0

East Asian
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allele count: 100
allele frequency: 6.793478260869565e-2
allele num: 1472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 762
allele frequency: 5.802619555284801e-2
allele num: 13132
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.399e1

VQSLOD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: 1.736e-1

FS
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SIO_000300: 1.1642e1

DP
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SIO_000300: 6.103023e6

BaseQRankSum
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SIO_000300: 3.66e-1

ReadPosRankSum
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QD
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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variant carriers: 6606

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 5

European (Non-Finnish)
type: Population
allele count: 3931
allele frequency: 2.993451111787999e-1
allele num: 13132
num of homozygotes: 0

African
type: Population
allele count: 451
allele frequency: 1.854440789473684e-1
allele num: 2432
num of homozygotes: 0

East Asian
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allele count: 585
allele frequency: 3.974184782608696e-1
allele num: 1472
num of homozygotes: 0

European (Finnish)
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allele count: 312
allele frequency: 3.627906976744186e-1
allele num: 860
num of homozygotes: 0

Latino
type: Population
allele count: 780
allele frequency: 3.884462151394422e-1
allele num: 2008
num of homozygotes: 0

South Asian
type: Population
allele count: 519
allele frequency: 2.011627906976744e-1
allele num: 2580
num of homozygotes: 0

Other
type: Population
allele count: 38
allele frequency: 3.064516129032258e-1
allele num: 124
num of homozygotes: 0

VQSLOD
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SIO_000300: -3.879e0

ReadPosRankSum
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SIO_000300: 4.17e0

MQRankSum
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FS
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SIO_000300: 1.1642e1

MQ
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SIO_000300: 4.399e1

ClippingRankSum
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SIO_000300: -1.456e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.736e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

DP
type: SiteQuality
SIO_000300: 6.103023e6

QD
type: SiteQuality
SIO_000300: 2.844e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 2008
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European (Non-Finnish)
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allele count: 1
allele frequency: 7.614986293024673e-5
allele num: 13132
num of homozygotes: 0

Other
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allele num: 124
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African
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allele frequency: 0.0e0
allele num: 2432
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 860
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VQSLOD
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MQ
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InbreedingCoeff
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FS
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DP
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MQRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 124
num of homozygotes: 0

African
type: Population
allele count: 15
allele frequency: 6.167763157894737e-3
allele num: 2432
num of homozygotes: 0

Latino
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allele count: 5
allele frequency: 2.49003984063745e-3
allele num: 2008
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East Asian
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allele count: 4
allele frequency: 2.717391304347826e-3
allele num: 1472
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European (Finnish)
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allele count: 1
allele frequency: 1.162790697674419e-3
allele num: 860
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European (Non-Finnish)
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allele count: 57
allele frequency: 4.340542187024063e-3
allele num: 13132
num of homozygotes: 0

South Asian
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MQ
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
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DP
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VQSLOD
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InbreedingCoeff
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 269
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European (Finnish)
type: Population
allele count: 46
allele frequency: 1.435705368289638e-2
allele num: 3204
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 550
allele frequency: 2.746978323843772e-2
allele num: 20022
num of homozygotes: 0

South Asian
type: Population
allele count: 66
allele frequency: 1.489841986455982e-2
allele num: 4430
num of homozygotes: 0

Latino
type: Population
allele count: 100
allele frequency: 5.370569280343716e-2
allele num: 1862
num of homozygotes: 0

African
type: Population
allele count: 88
allele frequency: 2.440377149195785e-2
allele num: 3606
num of homozygotes: 0

East Asian
type: Population
allele count: 86
allele frequency: 1.977920883164673e-2
allele num: 4348
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 1.724137931034483e-2
allele num: 232
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e0

MQRankSum
type: SiteQuality
SIO_000300: -3.166e0

FS
type: SiteQuality
SIO_000300: 1.827e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.219e-1

QD
type: SiteQuality
SIO_000300: 2.21e0

DP
type: SiteQuality
SIO_000300: 6.128206e6

MQ
type: SiteQuality
SIO_000300: 4.512e1

VQSLOD
type: SiteQuality
SIO_000300: -2.076e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.267e0

GenotypeQuality
all individuals: 171
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 968
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11157
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 963
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 5.370569280343716e-4
allele num: 1862
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3204
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.994506043352313e-5
allele num: 20022
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4348
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3606
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e0

QD
type: SiteQuality
SIO_000300: 2.21e0

MQRankSum
type: SiteQuality
SIO_000300: -3.166e0

FS
type: SiteQuality
SIO_000300: 1.827e1

VQSLOD
type: SiteQuality
SIO_000300: -2.076e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.219e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.267e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

DP
type: SiteQuality
SIO_000300: 6.128206e6

MQ
type: SiteQuality
SIO_000300: 4.512e1

GenotypeQuality
all individuals: 171
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11157
bin: 9.75e1
variant carriers: 295

GenotypeQuality
all individuals: 762
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 8
allele frequency: 1.805869074492099e-3
allele num: 4430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 197
allele frequency: 9.839176905404055e-3
allele num: 20022
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 8.620689655172414e-3
allele num: 232
num of homozygotes: 0

Latino
type: Population
allele count: 32
allele frequency: 1.718582169709989e-2
allele num: 1862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 14
allele frequency: 4.369538077403246e-3
allele num: 3204
num of homozygotes: 0

East Asian
type: Population
allele count: 15
allele frequency: 3.449862005519779e-3
allele num: 4348
num of homozygotes: 0

African
type: Population
allele count: 24
allele frequency: 6.655574043261231e-3
allele num: 3606
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.512e1

QD
type: SiteQuality
SIO_000300: 2.21e0

VQSLOD
type: SiteQuality
SIO_000300: -2.076e0

DP
type: SiteQuality
SIO_000300: 6.128206e6

FS
type: SiteQuality
SIO_000300: 1.827e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e0

MQRankSum
type: SiteQuality
SIO_000300: -3.166e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.219e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.267e0

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2615
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 735
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1072
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 993
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.603489192482843e-5
allele num: 62364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5964
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.479e1

QD
type: SiteQuality
SIO_000300: 2.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.36e-2

FS
type: SiteQuality
SIO_000300: 1.209e0

MQRankSum
type: SiteQuality
SIO_000300: -2.13e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.37e0

DP
type: SiteQuality
SIO_000300: 6.337457e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.35e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

GenotypeQuality
all individuals: 186
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19373
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 227
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5072
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4676
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.155930512841825e-5
allele num: 24062
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4362
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.583e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.393e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.75e0

FS
type: SiteQuality
SIO_000300: 1.0765e1

MQRankSum
type: SiteQuality
SIO_000300: -3.618e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e0

DP
type: SiteQuality
SIO_000300: 6.54655e6

MQ
type: SiteQuality
SIO_000300: 4.52e1

QD
type: SiteQuality
SIO_000300: 9.02e0

GenotypeQuality
all individuals: 199
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19373
bin: 9.75e1
variant carriers: 6543

GenotypeQuality
all individuals: 115
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 87
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 76
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 110
bin: 9.25e1
variant carriers: 5

European (Finnish)
type: Population
allele count: 311
allele frequency: 8.529895776193089e-2
allele num: 3646
num of homozygotes: 0

South Asian
type: Population
allele count: 517
allele frequency: 1.019321766561514e-1
allele num: 5072
num of homozygotes: 0

African
type: Population
allele count: 436
allele frequency: 9.32420872540633e-2
allele num: 4676
num of homozygotes: 0

East Asian
type: Population
allele count: 581
allele frequency: 1.331957817514901e-1
allele num: 4362
num of homozygotes: 0

Other
type: Population
allele count: 38
allele frequency: 1.357142857142857e-1
allele num: 280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3885
allele frequency: 1.614579004239049e-1
allele num: 24062
num of homozygotes: 0

Latino
type: Population
allele count: 781
allele frequency: 4.158679446219382e-1
allele num: 1878
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.618e0

DP
type: SiteQuality
SIO_000300: 6.54655e6

MQ
type: SiteQuality
SIO_000300: 4.52e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.583e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e0

VQSLOD
type: SiteQuality
SIO_000300: -2.393e0

QD
type: SiteQuality
SIO_000300: 9.02e0

FS
type: SiteQuality
SIO_000300: 1.0765e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e0

GenotypeQuality
all individuals: 468
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19373
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24062
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3646
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4362
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4676
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 5.324813631522897e-4
allele num: 1878
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0765e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.583e-1

MQ
type: SiteQuality
SIO_000300: 4.52e1

DP
type: SiteQuality
SIO_000300: 6.54655e6

MQRankSum
type: SiteQuality
SIO_000300: -3.618e0

QD
type: SiteQuality
SIO_000300: 9.02e0

VQSLOD
type: SiteQuality
SIO_000300: -2.393e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.75e0

GenotypeQuality
all individuals: 146
bin: 2.25e1
variant carriers: 3

GenotypeQuality
all individuals: 704
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 177
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 457
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 954
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 105
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 686
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2840
num of homozygotes: 0

African
type: Population
allele count: 18
allele frequency: 2.587694077055779e-3
allele num: 6956
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.229157378510923e-4
allele num: 13458
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 9.144947416552355e-4
allele num: 4374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 43
allele frequency: 9.70216606498195e-4
allele num: 44320
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.31e1

FS
type: SiteQuality
SIO_000300: 1.6573e1

DP
type: SiteQuality
SIO_000300: 6.342218e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.105e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.34e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.863e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.49e-1

QD
type: SiteQuality
SIO_000300: 1.04e1

GenotypeQuality
all individuals: 312
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.112856790326561e-5
allele num: 24314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5446
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.372e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.83e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.137e0

FS
type: SiteQuality
SIO_000300: 1.2009e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.423e0

DP
type: SiteQuality
SIO_000300: 6.617538e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.32e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.064000000000001e-1

QD
type: SiteQuality
SIO_000300: 8.289999999999999e0

GenotypeQuality
all individuals: 339
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 37519
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 221
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 946
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 269
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 802
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 16
allele frequency: 3.282724661469019e-3
allele num: 4874
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 6.893382352941177e-4
allele num: 4352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 42
allele frequency: 1.727399851937155e-3
allele num: 24314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.836210062431142e-4
allele num: 5446
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.289999999999999e0

DP
type: SiteQuality
SIO_000300: 6.617538e6

FS
type: SiteQuality
SIO_000300: 1.2009e1

MQRankSum
type: SiteQuality
SIO_000300: -2.137e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.83e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.423e0

VQSLOD
type: SiteQuality
SIO_000300: -6.064000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.372e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.32e-1

GenotypeQuality
all individuals: 63
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 126
bin: 5.75e1
variant carriers: 5

GenotypeQuality
all individuals: 691
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 10212
bin: 2.5e0
variant carriers: 9

GenotypeQuality
all individuals: 411
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 360
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 700
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 145
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 11

South Asian
type: Population
allele count: 418
allele frequency: 2.872062663185379e-2
allele num: 14554
num of homozygotes: 0

East Asian
type: Population
allele count: 439
allele frequency: 7.864564672160516e-2
allele num: 5582
num of homozygotes: 0

Other
type: Population
allele count: 27
allele frequency: 3.479381443298969e-2
allele num: 776
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 219
allele frequency: 5.65599173553719e-2
allele num: 3872
num of homozygotes: 0

Latino
type: Population
allele count: 634
allele frequency: 5.530355896720168e-2
allele num: 11464
num of homozygotes: 0

African
type: Population
allele count: 270
allele frequency: 3.179463024022609e-2
allele num: 8492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2969
allele frequency: 5.323459800616797e-2
allele num: 55772
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.32e0

MQRankSum
type: SiteQuality
SIO_000300: -3.451e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.473e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

MQ
type: SiteQuality
SIO_000300: 4.645e1

DP
type: SiteQuality
SIO_000300: 6.545643e6

FS
type: SiteQuality
SIO_000300: 8.167e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e0

VQSLOD
type: SiteQuality
SIO_000300: -1.246e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e0

GenotypeQuality
all individuals: 136
bin: 2.25e1
variant carriers: 6

GenotypeQuality
all individuals: 10212
bin: 2.5e0
variant carriers: 7

GenotypeQuality
all individuals: 700
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.25e1
variant carriers: 7

GenotypeQuality
all individuals: 126
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 676
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 168
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 691
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 999
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 64
bin: 2.75e1
variant carriers: 6

GenotypeQuality
all individuals: 45016
bin: 9.75e1
variant carriers: 1473

African
type: Population
allele count: 163
allele frequency: 1.919453603391427e-2
allele num: 8492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 90
allele frequency: 2.324380165289256e-2
allele num: 3872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 880
allele frequency: 1.577852685935595e-2
allele num: 55772
num of homozygotes: 0

Latino
type: Population
allele count: 137
allele frequency: 1.195045359385904e-2
allele num: 11464
num of homozygotes: 0

South Asian
type: Population
allele count: 96
allele frequency: 6.596124776693692e-3
allele num: 14554
num of homozygotes: 0

East Asian
type: Population
allele count: 136
allele frequency: 2.436402723038338e-2
allele num: 5582
num of homozygotes: 0

Other
type: Population
allele count: 11
allele frequency: 1.417525773195876e-2
allele num: 776
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

MQ
type: SiteQuality
SIO_000300: 4.645e1

VQSLOD
type: SiteQuality
SIO_000300: -1.246e0

QD
type: SiteQuality
SIO_000300: 4.32e0

FS
type: SiteQuality
SIO_000300: 8.167e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.473e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e0

DP
type: SiteQuality
SIO_000300: 6.545643e6

MQRankSum
type: SiteQuality
SIO_000300: -3.451e0

GenotypeQuality
all individuals: 2031
bin: 9.75e1
variant carriers: 1469

GenotypeQuality
all individuals: 84
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 11
allele frequency: 1.341463414634146e-1
allele num: 82
num of homozygotes: 0

South Asian
type: Population
allele count: 94
allele frequency: 3.369175627240143e-2
allele num: 2790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 87
allele frequency: 4.065420560747663e-1
allele num: 214
num of homozygotes: 0

African
type: Population
allele count: 161
allele frequency: 8.214285714285714e-2
allele num: 1960
num of homozygotes: 0

Latino
type: Population
allele count: 128
allele frequency: 2.857142857142857e-1
allele num: 448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 857
allele frequency: 1.787651230705048e-1
allele num: 4794
num of homozygotes: 0

East Asian
type: Population
allele count: 132
allele frequency: 2.894736842105263e-1
allele num: 456
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.09e0

MQ
type: SiteQuality
SIO_000300: 4.652e1

FS
type: SiteQuality
SIO_000300: 7.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.394e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.039999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.391e0

DP
type: SiteQuality
SIO_000300: 6.281172e6

VQSLOD
type: SiteQuality
SIO_000300: -2.139e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.297e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.09e0

GenotypeQuality
all individuals: 380
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 54236
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.085940759282436e-4
allele num: 4794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 82
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.139e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.297e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.394e0

FS
type: SiteQuality
SIO_000300: 7.02e0

MQ
type: SiteQuality
SIO_000300: 4.652e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.039999999999999e-2

DP
type: SiteQuality
SIO_000300: 6.281172e6

MQRankSum
type: SiteQuality
SIO_000300: -3.391e0

QD
type: SiteQuality
SIO_000300: 5.09e0

GenotypeQuality
all individuals: 339
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49182
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 182
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 108
bin: 9.25e1
variant carriers: 1

Latino
type: Population
allele count: 487
allele frequency: 3.786936236391913e-1
allele num: 1286
num of homozygotes: 0

Other
type: Population
allele count: 19
allele frequency: 1.43939393939394e-1
allele num: 132
num of homozygotes: 0

African
type: Population
allele count: 181
allele frequency: 6.211393273850378e-2
allele num: 2914
num of homozygotes: 0

South Asian
type: Population
allele count: 342
allele frequency: 9.308655416439847e-2
allele num: 3674
num of homozygotes: 0

East Asian
type: Population
allele count: 340
allele frequency: 3.578947368421053e-1
allele num: 950
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 187
allele frequency: 2.718023255813953e-1
allele num: 688
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2226
allele frequency: 1.883567439499069e-1
allele num: 11818
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.906e1

MQRankSum
type: SiteQuality
SIO_000300: -3.372e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.87e0

VQSLOD
type: SiteQuality
SIO_000300: 2.331e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.986e-1

MQ
type: SiteQuality
SIO_000300: 4.685e1

DP
type: SiteQuality
SIO_000300: 6.376168e6

FS
type: SiteQuality
SIO_000300: 5.953e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.75e0

GenotypeQuality
all individuals: 252
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5215
bin: 9.75e1
variant carriers: 1470

GenotypeQuality
all individuals: 190
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 11
allele frequency: 9.166666666666666e-2
allele num: 120
num of homozygotes: 0

Latino
type: Population
allele count: 128
allele frequency: 2.245614035087719e-1
allele num: 570
num of homozygotes: 0

African
type: Population
allele count: 161
allele frequency: 5.476190476190476e-2
allele num: 2940
num of homozygotes: 0

East Asian
type: Population
allele count: 132
allele frequency: 2.462686567164179e-1
allele num: 536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 87
allele frequency: 1.653992395437262e-1
allele num: 526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 858
allele frequency: 9.094763620945516e-2
allele num: 9434
num of homozygotes: 0

South Asian
type: Population
allele count: 94
allele frequency: 3.094140882159315e-2
allele num: 3038
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.182e1

MQRankSum
type: SiteQuality
SIO_000300: -3.195e0

MQ
type: SiteQuality
SIO_000300: 4.744e1

DP
type: SiteQuality
SIO_000300: 6.62394e6

VQSLOD
type: SiteQuality
SIO_000300: -1.978e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.547e0

FS
type: SiteQuality
SIO_000300: 5.038e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e0

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 376
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 259
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 771
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 118
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 181
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 201
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5215
bin: 9.75e1
variant carriers: 52

GenotypeQuality
all individuals: 177
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 6.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 42
allele frequency: 4.451982192071231e-3
allele num: 9434
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 5.597014925373134e-3
allele num: 536
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 5.442176870748299e-3
allele num: 2940
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 3.291639236339697e-4
allele num: 3038
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.547e0

MQRankSum
type: SiteQuality
SIO_000300: -3.195e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.978e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e0

QD
type: SiteQuality
SIO_000300: 2.182e1

FS
type: SiteQuality
SIO_000300: 5.038e0

DP
type: SiteQuality
SIO_000300: 6.62394e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e0

MQ
type: SiteQuality
SIO_000300: 4.744e1

GenotypeQuality
all individuals: 334
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 383
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 826
bin: 9.75e1
variant carriers: 52

GenotypeQuality
all individuals: 638
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 125
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 133
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 190
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 1.19047619047619e-2
allele num: 252
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 7.936507936507936e-3
allele num: 2016
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 42
allele frequency: 1.073619631901841e-2
allele num: 3912
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.804262478968031e-4
allele num: 3566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.827e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

DP
type: SiteQuality
SIO_000300: 6.690275e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.908e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.38e-1

MQ
type: SiteQuality
SIO_000300: 5.516e1

MQRankSum
type: SiteQuality
SIO_000300: -1.733e0

QD
type: SiteQuality
SIO_000300: 1.172e1

VQSLOD
type: SiteQuality
SIO_000300: 1.01e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.63e-1

GenotypeQuality
all individuals: 107
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 145
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3991
bin: 9.75e1
variant carriers: 50

GenotypeQuality
all individuals: 395
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1402
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 172
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 578
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 2.39463601532567e-4
allele num: 4176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 5.3475935828877e-3
allele num: 2992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 38
allele frequency: 4.007593334739506e-3
allele num: 9482
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 4.149377593360996e-3
allele num: 482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.739037e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.026e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

VQSLOD
type: SiteQuality
SIO_000300: 2.51e-1

MQ
type: SiteQuality
SIO_000300: 5.512e1

FS
type: SiteQuality
SIO_000300: 1.362e0

QD
type: SiteQuality
SIO_000300: 1.248e1

MQRankSum
type: SiteQuality
SIO_000300: -1.732e0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14520
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 551
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40403
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 486
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49966
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7492
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.947339169098236e-5
allele num: 14394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3118
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5058
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11306
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.98413e6

VQSLOD
type: SiteQuality
SIO_000300: -7.383999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.9e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.888e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

QD
type: SiteQuality
SIO_000300: 2.761e1

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

MQ
type: SiteQuality
SIO_000300: 4.753e1

GenotypeQuality
all individuals: 12385
bin: 9.75e1
variant carriers: 50

GenotypeQuality
all individuals: 129
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 629
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 572
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 191
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1014
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 475
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 38
allele frequency: 1.879699248120301e-3
allele num: 20216
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 3.54295837023915e-3
allele num: 4516
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.323101349563376e-4
allele num: 7558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2934
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 266
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1030
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 4.672897196261682e-4
allele num: 4280
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.675e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.964e-1

QD
type: SiteQuality
SIO_000300: 3.126e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.687e0

MQRankSum
type: SiteQuality
SIO_000300: -1.559e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.519e1

DP
type: SiteQuality
SIO_000300: 6.78565e6

GenotypeQuality
all individuals: 700
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5295
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1937
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23708
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3105
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1225
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11606
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1391
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5788
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11120
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4318
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.231223836493475e-4
allele num: 8122
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.802e0

MQ
type: SiteQuality
SIO_000300: 4.731e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.059e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.51e-1

QD
type: SiteQuality
SIO_000300: 2.92e1

VQSLOD
type: SiteQuality
SIO_000300: 2.56e0

DP
type: SiteQuality
SIO_000300: 6.255265e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.061e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.59e-1

GenotypeQuality
all individuals: 448
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3888
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2516
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20237
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 305
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7782
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3112
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7788
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5143
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3619
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.052853232259423e-4
allele num: 56988
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8668
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 8.048649615453407e-4
allele num: 11182
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.884e0

DP
type: SiteQuality
SIO_000300: 5.739759e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.34e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.407e0

QD
type: SiteQuality
SIO_000300: 1.153e1

FS
type: SiteQuality
SIO_000300: 5.27e-1

MQ
type: SiteQuality
SIO_000300: 4.673e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.99e-1

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4405
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5998
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3834
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3150
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26007
bin: 9.75e1
variant carriers: 576

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.444444444444444e-3
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 33
allele frequency: 2.853190385613004e-3
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 223
allele frequency: 2.15126374686475e-2
allele num: 10366
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 282
allele frequency: 4.257246376811594e-3
allele num: 66240
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 38
allele frequency: 5.755831566192063e-3
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.872e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.668e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

DP
type: SiteQuality
SIO_000300: 5.430669e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.224e1

GenotypeQuality
all individuals: 3151
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4691
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6009
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3830
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25489
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3511
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4403
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.935995302407516e-4
allele num: 10218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65810
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.679e-1

MQ
type: SiteQuality
SIO_000300: 4.813e1

MQRankSum
type: SiteQuality
SIO_000300: -7.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

QD
type: SiteQuality
SIO_000300: 2.316e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.59e-1

DP
type: SiteQuality
SIO_000300: 5.412685e6

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26264
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3531
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6028
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4415
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3846
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.6e0

DP
type: SiteQuality
SIO_000300: 5.414949e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

FS
type: SiteQuality
SIO_000300: 2.128e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

QD
type: SiteQuality
SIO_000300: 2.17e0

VQSLOD
type: SiteQuality
SIO_000300: -1.608e0

MQ
type: SiteQuality
SIO_000300: 5.089e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.17e-1

GenotypeQuality
all individuals: 3161
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8719
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4702
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3526
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4414
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10300
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.425418384671356e-4
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.224e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e-1

MQ
type: SiteQuality
SIO_000300: 4.998e1

MQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.46e0

DP
type: SiteQuality
SIO_000300: 5.409359e6

FS
type: SiteQuality
SIO_000300: 1.102e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.59e-1

QD
type: SiteQuality
SIO_000300: 1.412e1

GenotypeQuality
all individuals: 3183
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3869
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25815
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8750
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6073
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66340
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.394746e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 5.794e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.52e0

VQSLOD
type: SiteQuality
SIO_000300: -2.665e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.866e0

MQ
type: SiteQuality
SIO_000300: 5.08e1

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

QD
type: SiteQuality
SIO_000300: 1.758e1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6088
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8768
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4749
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3897
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3192
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4466
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.174e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
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SIO_000300: 1.412e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.18e0

MQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

DP
type: SiteQuality
SIO_000300: 5.392897e6

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.993e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.1e-2

ClippingRankSum
type: SiteQuality
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DP
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QD
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InbreedingCoeff
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SIO_000300: -1.0e-4

MQRankSum
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SIO_000300: 1.77e0

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.049e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

MQ
type: SiteQuality
SIO_000300: 4.935e1

DP
type: SiteQuality
SIO_000300: 5.392571e6

MQRankSum
type: SiteQuality
SIO_000300: 2.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.264e0

FS
type: SiteQuality
SIO_000300: 4.485e0

VQSLOD
type: SiteQuality
SIO_000300: -2.147e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

Latino
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allele count: 2
allele frequency: 1.728011059270779e-4
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.037e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-1

FS
type: SiteQuality
SIO_000300: 4.031e0

DP
type: SiteQuality
SIO_000300: 5.39256e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.97e-1

MQ
type: SiteQuality
SIO_000300: 5.166e1

QD
type: SiteQuality
SIO_000300: 1.488e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.65e0

MQ
type: SiteQuality
SIO_000300: 5.146e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 5.392538e6

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 8.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.29e-1

FS
type: SiteQuality
SIO_000300: 1.4405e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Other
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allele count: 0
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allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.87e-1

FS
type: SiteQuality
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MQ
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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QD
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 6
allele frequency: 8.990380293086398e-5
allele num: 66738
num of homozygotes: 0

InbreedingCoeff
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MQ
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FS
type: SiteQuality
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QD
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MQRankSum
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ClippingRankSum
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VQSLOD
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DP
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.495324862143371e-5
allele num: 66736
num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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MQ
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DP
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 9.609840476648087e-5
allele num: 10406
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Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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VQSLOD
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BaseQRankSum
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MQRankSum
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DP
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MQ
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.679e0

FS
type: SiteQuality
SIO_000300: 6.54e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.3e0

DP
type: SiteQuality
SIO_000300: 5.392432e6

MQRankSum
type: SiteQuality
SIO_000300: 1.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.251e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.68e-1

QD
type: SiteQuality
SIO_000300: 1.446e1

GenotypeQuality
all individuals: 3897
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6088
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25955
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3573
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.79e-1

QD
type: SiteQuality
SIO_000300: 1.487e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

DP
type: SiteQuality
SIO_000300: 5.392453e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.211e0

MQ
type: SiteQuality
SIO_000300: 5.594e1

MQRankSum
type: SiteQuality
SIO_000300: -1.203e0

FS
type: SiteQuality
SIO_000300: 2.197e0

VQSLOD
type: SiteQuality
SIO_000300: -5.092e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8764
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.417e1

DP
type: SiteQuality
SIO_000300: 5.392292e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

FS
type: SiteQuality
SIO_000300: 8.397e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.78e0

VQSLOD
type: SiteQuality
SIO_000300: -2.041e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.93e-1

MQ
type: SiteQuality
SIO_000300: 5.524e1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4747
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.389781e6

MQ
type: SiteQuality
SIO_000300: 5.707e1

FS
type: SiteQuality
SIO_000300: 4.521e0

MQRankSum
type: SiteQuality
SIO_000300: 9.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.2e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.870000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.263e1