5-142513618-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513618
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513618
    reference: chr 5
allele count: 12
allele frequency: 9.897233723174372e-5
allele num: 121246
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.123C>G
  hgvsp: ENST00000419676.1:c.123C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1785C>G
  hgvsp: ENST00000378004.3:c.1785C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.500C>G
  hgvsp: ENST00000418236.1:c.500C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1785C>G
  hgvsp: ENST00000274498.4:c.1785C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.641C>G
  hgvsp: ENST00000443674.1:c.641C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.69C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.120C>G
  hgvsp: ENST00000424007.1:c.120C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24084
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51029
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser595Ser
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

5-142513618-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513618
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513618
    reference: chr 5
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.69C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.120C>T
  hgvsp: ENST00000424007.1:c.120C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1785C>T
  hgvsp: ENST00000378004.3:c.1785C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.641C>T
  hgvsp: ENST00000443674.1:c.641C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.500C>T
  hgvsp: ENST00000418236.1:c.500C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.123C>T
  hgvsp: ENST00000419676.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1785C>T
  hgvsp: ENST00000274498.4:c.1785C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24084
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2361
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51029
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser595Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

5-142513624-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513624
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513624
    reference: chr 5
allele count: 6
allele frequency: 4.950086626515964e-5
allele num: 121210
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1791C>T
  hgvsp: ENST00000378004.3:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.75C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.647C>T
  hgvsp: ENST00000443674.1:c.647C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.126C>T
  hgvsp: ENST00000424007.1:c.126C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.506C>T
  hgvsp: ENST00000418236.1:c.506C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1791C>T
  hgvsp: ENST00000274498.4:c.1791C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.129C>T
  hgvsp: ENST00000419676.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4484
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24082
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6215
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51025
  bin: 9.75e1
  variant carriers: 6
hgvs: p.Ser597Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum

5-142513625-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513625
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513625
    reference: chr 5
allele count: 3
allele frequency: 2.47520667975776e-5
allele num: 121202
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.507G>A
  hgvsp: ENSP00000416889.1:p.Glu170Lys
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1792G>A
  hgvsp: ENSP00000274498.4:p.Glu598Lys
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.76G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.130G>A
  hgvsp: ENSP00000413283.1:p.Glu44Lys
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.127G>A
  hgvsp: ENSP00000400565.1:p.Glu43Lys
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1792G>A
  hgvsp: ENSP00000367243.3:p.Glu598Lys
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.648G>A
  hgvsp: ENSP00000393276.1:p.Glu217Lys
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24077
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51025
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu598Lys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

5-142513636-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513636
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513636
    reference: chr 5
allele count: 1
allele frequency: 8.258729477057249e-6
allele num: 121084
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1803G>A
  hgvsp: ENST00000274498.4:c.1803G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.141G>A
  hgvsp: ENST00000419676.1:c.141G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.659G>A
  hgvsp: ENST00000443674.1:c.659G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.518G>A
  hgvsp: ENST00000418236.1:c.518G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.87G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1803G>A
  hgvsp: ENST00000378004.3:c.1803G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.138G>A
  hgvsp: ENST00000424007.1:c.138G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2887
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24075
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5969
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu601Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

5-142513638-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513638
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513638
    reference: chr 5
allele count: 6
allele frequency: 4.956465709518066e-5
allele num: 121054
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.661C>T
  hgvsp: ENSP00000393276.1:p.Thr221Met
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.143C>T
  hgvsp: ENSP00000413283.1:p.Thr48Met
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1805C>T
  hgvsp: ENSP00000367243.3:p.Thr602Met
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.520C>T
  hgvsp: ENSP00000416889.1:p.Thr174Met
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.89C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1805C>T
  hgvsp: ENSP00000274498.4:p.Thr602Met
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.140C>T
  hgvsp: ENSP00000400565.1:p.Thr47Met
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2887
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3181
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24074
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr602Met
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

5-142513639-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513639
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513639
    reference: chr 5
allele count: 5
allele frequency: 4.131002346409333e-5
allele num: 121036
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.144G>A
  hgvsp: ENST00000419676.1:c.144G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.521G>A
  hgvsp: ENST00000418236.1:c.521G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1806G>A
  hgvsp: ENST00000274498.4:c.1806G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.662G>A
  hgvsp: ENST00000443674.1:c.662G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.90G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.141G>A
  hgvsp: ENST00000424007.1:c.141G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1806G>A
  hgvsp: ENST00000378004.3:c.1806G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24071
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5854
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr602Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP

5-142513639-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513639
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513639
    reference: chr 5
allele count: 3
allele frequency: 2.4786014078456e-5
allele num: 121036
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.521G>T
  hgvsp: ENST00000418236.1:c.521G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.90G>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.141G>T
  hgvsp: ENST00000424007.1:c.141G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.144G>T
  hgvsp: ENST00000419676.1:c.144G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.662G>T
  hgvsp: ENST00000443674.1:c.662G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1806G>T
  hgvsp: ENST00000274498.4:c.1806G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1806G>T
  hgvsp: ENST00000378004.3:c.1806G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24071
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5854
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr602Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/5-142513649-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513649
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513649
    reference: chr 5
allele count: 1
allele frequency: 8.272119647938589e-6
allele num: 120888
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.531A>C
  hgvsp: ENSP00000416889.1:p.Thr178Pro
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.154A>C
  hgvsp: ENSP00000413283.1:p.Thr52Pro
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1816A>C
  hgvsp: ENSP00000274498.4:p.Thr606Pro
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1816A>C
  hgvsp: ENSP00000367243.3:p.Thr606Pro
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.151A>C
  hgvsp: ENSP00000400565.1:p.Thr51Pro
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.672A>C
  hgvsp: ENSP00000393276.1:p.Thr225Pro
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.100A>C
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3164
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24067
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5363
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr606Pro
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

5-142513651-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513651
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513651
    reference: chr 5
allele count: 3
allele frequency: 2.482539472377611e-5
allele num: 120844
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.533C>T
  hgvsp: ENST00000418236.1:c.533C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1818C>T
  hgvsp: ENST00000274498.4:c.1818C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.674C>T
  hgvsp: ENST00000443674.1:c.674C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1818C>T
  hgvsp: ENST00000378004.3:c.1818C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.156C>T
  hgvsp: ENST00000419676.1:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.153C>T
  hgvsp: ENST00000424007.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.102C>T
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24066
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3165
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr606Thr
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

5-142513652-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513652
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513652
    reference: chr 5
allele count: 33
allele frequency: 2.731200238359293e-4
allele num: 120826
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.154G>A
  hgvsp: ENSP00000400565.1:p.Val52Ile
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.534G>A
  hgvsp: ENSP00000416889.1:p.Val179Ile
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.675G>A
  hgvsp: ENSP00000393276.1:p.Val226Ile
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1819G>A
  hgvsp: ENSP00000274498.4:p.Val607Ile
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1819G>A
  hgvsp: ENSP00000367243.3:p.Val607Ile
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.103G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.157G>A
  hgvsp: ENSP00000413283.1:p.Val53Ile
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24064
  bin: 9.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2887
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3165
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51021
  bin: 9.75e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val607Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ

5-142513661-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513661
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513661
    reference: chr 5
allele count: 2
allele frequency: 1.657275439177991e-5
allele num: 120680
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1828A>G
  hgvsp: ENSP00000367243.3:p.Thr610Ala
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.166A>G
  hgvsp: ENSP00000413283.1:p.Thr56Ala
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.543A>G
  hgvsp: ENSP00000416889.1:p.Thr182Ala
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.684A>G
  hgvsp: ENSP00000393276.1:p.Thr229Ala
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1828A>G
  hgvsp: ENSP00000274498.4:p.Thr610Ala
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.163A>G
  hgvsp: ENSP00000400565.1:p.Thr55Ala
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.112A>G
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24054
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2890
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2607
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4426
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr610Ala
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

5-142513662-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513662
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513662
    reference: chr 5
allele count: 4
allele frequency: 3.315704835955503e-5
allele num: 120638
alternate allele: T
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.685C>T
  hgvsp: ENSP00000393276.1:p.Thr229Ile
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.544C>T
  hgvsp: ENSP00000416889.1:p.Thr182Ile
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.113C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1829C>T
  hgvsp: ENSP00000274498.4:p.Thr610Ile
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1829C>T
  hgvsp: ENSP00000367243.3:p.Thr610Ile
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.167C>T
  hgvsp: ENSP00000413283.1:p.Thr56Ile
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.164C>T
  hgvsp: ENSP00000400565.1:p.Thr55Ile
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2607
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2890
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24053
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4282
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51023
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr610Ile
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

5-142513663-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513663
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513663
    reference: chr 5
allele count: 2
allele frequency: 1.657879903179814e-5
allele num: 120636
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1830A>G
  hgvsp: ENST00000274498.4:c.1830A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.114A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.165A>G
  hgvsp: ENST00000424007.1:c.165A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.686A>G
  hgvsp: ENST00000443674.1:c.686A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.168A>G
  hgvsp: ENST00000419676.1:c.168A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1830A>G
  hgvsp: ENST00000378004.3:c.1830A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.545A>G
  hgvsp: ENST00000418236.1:c.545A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2891
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24052
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2607
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4243
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr610Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP

5-142513674-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513674
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513674
    reference: chr 5
allele count: 1
allele frequency: 8.30592378484335e-6
allele num: 120396
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.693+4A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1837+4A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.552+4A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1837+4A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.175+4A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.121+4A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.172+4A>G
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3004
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1790
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2890
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24052
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51019
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3049
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 8.25e1
  variant carriers: 0
hgvs: c.1837+4A>G
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

5-142513686-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513686
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513686
    reference: chr 5
allele count: 65430
allele frequency: 5.453045304530453e-1
allele num: 119988
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.552+16A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.175+16A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.172+16A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1837+16A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.693+16A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.121+16A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1837+16A>G
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 2.25e1
  variant carriers: 1279
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 7.5e0
  variant carriers: 264
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 9.25e1
  variant carriers: 3120
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 1.75e1
  variant carriers: 1535
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 6.25e1
  variant carriers: 1321
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 3.75e1
  variant carriers: 592
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 7.75e1
  variant carriers: 2390
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 1.25e1
  variant carriers: 1213
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 3.25e1
  variant carriers: 620
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 5.25e1
  variant carriers: 792
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 4.75e1
  variant carriers: 731
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 4.25e1
  variant carriers: 610
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 6.75e1
  variant carriers: 1600
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 8.25e1
  variant carriers: 2701
genotype depth: GenotypeDepth
  all individuals: 3334
  bin: 8.75e1
  variant carriers: 2920
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 2.75e1
  variant carriers: 770
genotype depth: GenotypeDepth
  all individuals: 3115
  bin: 7.25e1
  variant carriers: 1980
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 5.75e1
  variant carriers: 1071
genotype depth: GenotypeDepth
  all individuals: 22533
  bin: 9.75e1
  variant carriers: 21614
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.25e1
  variant carriers: 139
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.75e1
  variant carriers: 138
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 2.75e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 6.75e1
  variant carriers: 186
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 8.25e1
  variant carriers: 159
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 2.25e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 3.75e1
  variant carriers: 234
num of homozygotes: 18587
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

5-142513696-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513696
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513696
    reference: chr 5
allele count: 1
allele frequency: 8.547592997811816e-6
allele num: 116992
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.693+26C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1837+26C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.121+26C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1837+26C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.552+26C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.175+26C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.172+26C>T
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5085
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3776
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5734
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2543
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

5-142513697-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513697
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513697
    reference: chr 5
allele count: 7
allele frequency: 5.984440454817474e-5
allele num: 116970
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.693+27G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.175+27G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.552+27G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.172+27G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1837+27G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1837+27G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.121+27G>A
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5085
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5085
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6005
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5734
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1909
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

5-142513700-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513700
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513700
    reference: chr 5
allele count: 1
allele frequency: 8.568539749455898e-6
allele num: 116706
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1837+30G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.121+30G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.693+30G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1837+30G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.175+30G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.172+30G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.552+30G>A
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5084
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3944
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5734
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6004
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5087
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3774
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44597
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3074
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1532
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1906
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

5-142513718-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142513718
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142513718
    reference: chr 5
allele count: 1
allele frequency: 8.66190839165685e-6
allele num: 115448
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.172+48T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.552+48T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.121+48T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.175+48T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1837+48T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1837+48T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.693+48T>C
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5083
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5996
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5732
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1475
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2488
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1514
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

5-142526753-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526753
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526753
    reference: chr 5
allele count: 1
allele frequency: 8.551686392556613e-6
allele num: 116936
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.553-43A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.122-43A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.173-43A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.694-43A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1838-43A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.176-43A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1838-43A>G
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14107
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3809
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4576
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3448
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2176
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS

http://identifiers.org/exac.variant/5-142526760-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526760
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526760
    reference: chr 5
allele count: 35
allele frequency: 2.98782674019566e-4
allele num: 117142
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.122-36A>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.176-36A>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.173-36A>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1838-36A>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1838-36A>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.553-36A>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.694-36A>C
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1904
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16064
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12181
  bin: 9.75e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 4580
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1959
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17266
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ

5-142526761-ATAT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526761
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526758
    reference: chr 5
allele count: 17
allele frequency: 1.451131028595817e-4
allele num: 117150
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1838-32_1838-30delTTA
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.173-32_173-30delTTA
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.694-32_694-30delTTA
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.553-32_553-30delTTA
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.122-32_122-30delTTA
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.176-32_176-30delTTA
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1838-32_1838-30delTTA
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14125
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16076
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 4582
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1961
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12159
  bin: 9.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 17357
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: ATAT
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum

5-142526764-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526764
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526764
    reference: chr 5
allele count: 1
allele frequency: 8.535773426430169e-6
allele num: 117154
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.553-32T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1838-32T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.694-32T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.122-32T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.173-32T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.176-32T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1838-32T>C
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8498
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3454
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4580
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12147
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS

5-142526769-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526769
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526769
    reference: chr 5
allele count: 1
allele frequency: 8.520064752492119e-6
allele num: 117370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.173-27A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.176-27A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.694-27A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1838-27A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.553-27A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1838-27A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.122-27A>G
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4864
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7553
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3456
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17947
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-142526786-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526786
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526786
    reference: chr 5
allele count: 11
allele frequency: 9.254585226316675e-5
allele num: 118860
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1838-10T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.122-10T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1838-10T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.176-10T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.694-10T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.553-10T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.173-10T>C
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16600
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4591
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2181
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3478
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19343
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

5-142526786-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526786
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526787
    reference: chr 5
allele count: 19
allele frequency: 1.598519266363789e-4
allele num: 118860
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.694-3dupC
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.553-3dupC
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.173-3dupC
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.176-3dupC
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1838-3dupC
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1838-3dupC
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.122-3dupC
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16600
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3199
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5366
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1215
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3478
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

5-142526787-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526787
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526787
    reference: chr 5
allele count: 1
allele frequency: 8.414250374434141e-6
allele num: 118846
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.122-9C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1838-9C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1838-9C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.553-9C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.173-9C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.176-9C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.694-9C>T
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3472
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 350
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4585
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff

5-142526789-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526789
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526789
    reference: chr 5
allele count: 1
allele frequency: 8.367780697203488e-6
allele num: 119506
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.553-7C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.176-7C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1838-7C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.173-7C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.122-7C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.694-7C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1838-7C>T
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6343
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16788
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5384
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3202
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1029
  bin: 2.25e1
  variant carriers: 0
hgvs: c.1838-7C>T
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP

5-142526791-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526791
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526791
    reference: chr 5
allele count: 19
allele frequency: 1.586638830897704e-4
allele num: 119750
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.176-5C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.173-5C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1838-5C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.694-5C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1838-5C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.553-5C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.122-5C>G
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14261
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16856
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6457
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19900
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12121
  bin: 9.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 7780
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1838-5C>G
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

5-142526792-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526792
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526792
    reference: chr 5
allele count: 9
allele frequency: 7.511266900350526e-5
allele num: 119820
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.122-4C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.173-4C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.694-4C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1838-4C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.553-4C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.176-4C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1838-4C>G
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8511
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6529
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16901
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14271
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3500
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4602
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5368
  bin: 7.75e1
  variant carriers: 0
hgvs: c.1838-4C>G
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

5-142526793-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526793
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526793
    reference: chr 5
allele count: 2
allele frequency: 1.667000066680003e-5
allele num: 119976
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.173-3C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1838-3C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.694-3C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1838-3C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.176-3C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.122-3C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.553-3C>T
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5105
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8515
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14282
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3198
  bin: 9.25e1
  variant carriers: 0
hgvs: c.1838-3C>T
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

5-142526797-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526797
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526797
    reference: chr 5
allele count: 1
allele frequency: 8.317114959162966e-6
allele num: 120234
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.695G>A
  hgvsp: ENST00000443674.1:c.695G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.174G>A
  hgvsp: ENST00000424007.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1839G>A
  hgvsp: ENST00000274498.4:c.1839G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1839G>A
  hgvsp: ENST00000378004.3:c.1839G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.554G>A
  hgvsp: ENST00000418236.1:c.554G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.177G>A
  hgvsp: ENST00000419676.1:c.177G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.123G>A
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3503
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.75e1
  variant carriers: 0
hgvs: c.1839G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

5-142526813-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526813
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526813
    reference: chr 5
allele count: 1
allele frequency: 8.260776182530111e-6
allele num: 121054
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.711A>G
  hgvsp: ENSP00000393276.1:p.Ile238Val
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1855A>G
  hgvsp: ENSP00000367243.3:p.Ile619Val
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.190A>G
  hgvsp: ENSP00000400565.1:p.Ile64Val
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.570A>G
  hgvsp: ENSP00000416889.1:p.Ile191Val
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1855A>G
  hgvsp: ENSP00000274498.4:p.Ile619Val
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.193A>G
  hgvsp: ENSP00000413283.1:p.Ile65Val
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.139A>G
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5103
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5386
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3513
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ile619Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

5-142526826-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526826
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526826
    reference: chr 5
allele count: 1
allele frequency: 8.248783304462591e-6
allele num: 121230
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.206G>C
  hgvsp: ENSP00000413283.1:p.Ser69Thr
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.203G>C
  hgvsp: ENSP00000400565.1:p.Ser68Thr
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.152G>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1868G>C
  hgvsp: ENSP00000367243.3:p.Ser623Thr
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1868G>C
  hgvsp: ENSP00000274498.4:p.Ser623Thr
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.724G>C
  hgvsp: ENSP00000393276.1:p.Ser242Thr
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.583G>C
  hgvsp: ENSP00000416889.1:p.Ser195Thr
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8519
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17520
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14376
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3509
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12095
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5368
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser623Thr
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

5-142526831-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526831
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526831
    reference: chr 5
allele count: 1
allele frequency: 8.246198502490351e-6
allele num: 121268
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.588G>C
  hgvsp: ENSP00000416889.1:p.Glu197Gln
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.157G>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.729G>C
  hgvsp: ENSP00000393276.1:p.Glu244Gln
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.211G>C
  hgvsp: ENSP00000413283.1:p.Glu71Gln
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1873G>C
  hgvsp: ENSP00000367243.3:p.Glu625Gln
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.208G>C
  hgvsp: ENSP00000400565.1:p.Glu70Gln
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1873G>C
  hgvsp: ENSP00000274498.4:p.Glu625Gln
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17545
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14377
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3508
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7903
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3200
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu625Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

5-142526837-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526837
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526837
    reference: chr 5
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.163G>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.214G>C
  hgvsp: ENSP00000400565.1:p.Val72Leu
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1879G>C
  hgvsp: ENSP00000367243.3:p.Val627Leu
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.735G>C
  hgvsp: ENSP00000393276.1:p.Val246Leu
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.594G>C
  hgvsp: ENSP00000416889.1:p.Val199Leu
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.217G>C
  hgvsp: ENSP00000413283.1:p.Val73Leu
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1879G>C
  hgvsp: ENSP00000274498.4:p.Val627Leu
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17556
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5105
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12093
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7910
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3515
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5361
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val627Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD

5-142526839-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526839
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526839
    reference: chr 5
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.596C>G
  hgvsp: ENST00000418236.1:c.596C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1881C>G
  hgvsp: ENST00000274498.4:c.1881C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.219C>G
  hgvsp: ENST00000419676.1:c.219C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.216C>G
  hgvsp: ENST00000424007.1:c.216C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.165C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.737C>G
  hgvsp: ENST00000443674.1:c.737C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1881C>G
  hgvsp: ENST00000378004.3:c.1881C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17558
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7279
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4590
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val627Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

http://identifiers.org/exac.variant/5-142526846-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526846
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526846
    reference: chr 5
allele count: 3
allele frequency: 2.472636159831201e-5
allele num: 121328
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1888A>C
  hgvsp: ENSP00000274498.4:p.Asn630His
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.223A>C
  hgvsp: ENSP00000400565.1:p.Asn75His
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.744A>C
  hgvsp: ENSP00000393276.1:p.Asn249His
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.603A>C
  hgvsp: ENSP00000416889.1:p.Asn202His
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1888A>C
  hgvsp: ENSP00000367243.3:p.Asn630His
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.172A>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.226A>C
  hgvsp: ENSP00000413283.1:p.Asn76His
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17574
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5105
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8516
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4591
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5360
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn630His
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

5-142526848-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526848
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526848
    reference: chr 5
allele count: 1
allele frequency: 8.241712957621112e-6
allele num: 121334
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.605T>C
  hgvsp: ENST00000418236.1:c.605T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1890T>C
  hgvsp: ENST00000274498.4:c.1890T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.746T>C
  hgvsp: ENST00000443674.1:c.746T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.228T>C
  hgvsp: ENST00000419676.1:c.228T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.225T>C
  hgvsp: ENST00000424007.1:c.225T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.174T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1890T>C
  hgvsp: ENST00000378004.3:c.1890T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17571
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3513
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3199
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4592
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn630Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

5-142526866-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526866
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526866
    reference: chr 5
allele count: 1
allele frequency: 8.241984669908513e-6
allele num: 121330
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.623T>C
  hgvsp: ENST00000418236.1:c.623T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.246T>C
  hgvsp: ENST00000419676.1:c.246T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1908T>C
  hgvsp: ENST00000274498.4:c.1908T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.764T>C
  hgvsp: ENST00000443674.1:c.764T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.243T>C
  hgvsp: ENST00000424007.1:c.243T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.192T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1908T>C
  hgvsp: ENST00000378004.3:c.1908T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8513
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21722
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3512
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3199
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn636Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/5-142526882-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526882
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526883
    reference: chr 5
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.640dupA
  hgvsp: ENSP00000416889.1:p.Pro215AlafsTer7
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.209dupA
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.263dupA
  hgvsp: ENSP00000413283.1:p.Pro89AlafsTer7
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1925dupA
  hgvsp: ENSP00000274498.4:p.Pro643AlafsTer7
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1925dupA
  hgvsp: ENSP00000367243.3:p.Pro643AlafsTer7
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.781dupA
  hgvsp: ENSP00000393276.1:p.Pro262AlafsTer7
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.260dupA
  hgvsp: ENSP00000400565.1:p.Pro88AlafsTer7
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4588
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3511
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12090
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Pro643AlafsTer7
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

5-142526882-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526882
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526882
    reference: chr 5
allele count: 1
allele frequency: 8.244023083264634e-6
allele num: 121300
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.262C>T
  hgvsp: ENSP00000413283.1:p.Gln88Ter
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.259C>T
  hgvsp: ENSP00000400565.1:p.Gln87Ter
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1924C>T
  hgvsp: ENSP00000274498.4:p.Gln642Ter
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.780C>T
  hgvsp: ENSP00000393276.1:p.Gln261Ter
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.208C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.639C>T
  hgvsp: ENSP00000416889.1:p.Gln214Ter
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1924C>T
  hgvsp: ENSP00000367243.3:p.Gln642Ter
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3199
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln642Ter
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/5-142526885-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526885
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526885
    reference: chr 5
allele count: 1
allele frequency: 8.244430886935875e-6
allele num: 121294
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1927C>A
  hgvsp: ENSP00000274498.4:p.Pro643Thr
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.783C>A
  hgvsp: ENSP00000393276.1:p.Pro262Thr
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1927C>A
  hgvsp: ENSP00000367243.3:p.Pro643Thr
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.265C>A
  hgvsp: ENSP00000413283.1:p.Pro89Thr
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.211C>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.642C>A
  hgvsp: ENSP00000416889.1:p.Pro215Thr
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.262C>A
  hgvsp: ENSP00000400565.1:p.Pro88Thr
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7224
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14364
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2177
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12088
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21672
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro643Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

5-142526886-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526886
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526886
    reference: chr 5
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.784C>T
  hgvsp: ENSP00000393276.1:p.Pro262Leu
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.263C>T
  hgvsp: ENSP00000400565.1:p.Pro88Leu
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.212C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1928C>T
  hgvsp: ENSP00000274498.4:p.Pro643Leu
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.266C>T
  hgvsp: ENSP00000413283.1:p.Pro89Leu
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1928C>T
  hgvsp: ENSP00000367243.3:p.Pro643Leu
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.643C>T
  hgvsp: ENSP00000416889.1:p.Pro215Leu
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17570
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7225
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12087
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Pro643Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

5-142526889-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526889
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526889
    reference: chr 5
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.646A>G
  hgvsp: ENSP00000416889.1:p.Asn216Ser
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.787A>G
  hgvsp: ENSP00000393276.1:p.Asn263Ser
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1931A>G
  hgvsp: ENSP00000274498.4:p.Asn644Ser
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.215A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.269A>G
  hgvsp: ENSP00000413283.1:p.Asn90Ser
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.266A>G
  hgvsp: ENSP00000400565.1:p.Asn89Ser
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1931A>G
  hgvsp: ENSP00000367243.3:p.Asn644Ser
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7886
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12085
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn644Ser
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/5-142526891-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526891
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526891
    reference: chr 5
allele count: 4
allele frequency: 3.298044259753966e-5
allele num: 121284
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.789A>C
  hgvsp: ENSP00000393276.1:p.Met264Leu
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1933A>C
  hgvsp: ENSP00000274498.4:p.Met645Leu
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.271A>C
  hgvsp: ENSP00000413283.1:p.Met91Leu
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1933A>C
  hgvsp: ENSP00000367243.3:p.Met645Leu
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.648A>C
  hgvsp: ENSP00000416889.1:p.Met217Leu
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.217A>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.268A>C
  hgvsp: ENSP00000400565.1:p.Met90Leu
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5109
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7880
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21680
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Met645Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

5-142526891-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526891
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526891
    reference: chr 5
allele count: 1
allele frequency: 8.245110649384915e-6
allele num: 121284
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1933A>G
  hgvsp: ENSP00000274498.4:p.Met645Val
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.268A>G
  hgvsp: ENSP00000400565.1:p.Met90Val
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.789A>G
  hgvsp: ENSP00000393276.1:p.Met264Val
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.217A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.648A>G
  hgvsp: ENSP00000416889.1:p.Met217Val
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.271A>G
  hgvsp: ENSP00000413283.1:p.Met91Val
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1933A>G
  hgvsp: ENSP00000367243.3:p.Met645Val
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5109
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8515
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14355
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4588
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3510
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12086
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21680
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Met645Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD

5-142526892-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526892
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526892
    reference: chr 5
allele count: 4
allele frequency: 3.298533801725133e-5
allele num: 121266
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.649T>G
  hgvsp: ENSP00000416889.1:p.Met217Arg
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1934T>G
  hgvsp: ENSP00000274498.4:p.Met645Arg
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.790T>G
  hgvsp: ENSP00000393276.1:p.Met264Arg
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.218T>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.269T>G
  hgvsp: ENSP00000400565.1:p.Met90Arg
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.272T>G
  hgvsp: ENSP00000413283.1:p.Met91Arg
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1934T>G
  hgvsp: ENSP00000367243.3:p.Met645Arg
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1422
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5110
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17562
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met645Arg
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQ

5-142526900-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526900
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526900
    reference: chr 5
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1942A>G
  hgvsp: ENSP00000367243.3:p.Ser648Gly
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.657A>G
  hgvsp: ENSP00000416889.1:p.Ser220Gly
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1942A>G
  hgvsp: ENSP00000274498.4:p.Ser648Gly
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.798A>G
  hgvsp: ENSP00000393276.1:p.Ser267Gly
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.277A>G
  hgvsp: ENSP00000400565.1:p.Ser93Gly
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.280A>G
  hgvsp: ENSP00000413283.1:p.Ser94Gly
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.226A>G
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1419
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14362
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7185
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5108
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7867
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21628
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3510
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ser648Gly
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-142526905-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526905
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526905
    reference: chr 5
allele count: 100
allele frequency: 8.250825082508251e-4
allele num: 121200
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.282C>T
  hgvsp: ENST00000424007.1:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.662C>T
  hgvsp: ENST00000418236.1:c.662C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1947C>T
  hgvsp: ENST00000378004.3:c.1947C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.285C>T
  hgvsp: ENST00000419676.1:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.231C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.803C>T
  hgvsp: ENST00000443674.1:c.803C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1947C>T
  hgvsp: ENST00000274498.4:c.1947C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17536
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5107
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8508
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 9.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 5.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12092
  bin: 9.75e1
  variant carriers: 99
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5352
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp649Asp
num of homozygotes: 1
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

5-142526907-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526907
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526907
    reference: chr 5
allele count: 1
allele frequency: 8.252731654177533e-6
allele num: 121172
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.805C>G
  hgvsp: ENSP00000393276.1:p.Pro269Arg
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1949C>G
  hgvsp: ENSP00000274498.4:p.Pro650Arg
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.287C>G
  hgvsp: ENSP00000413283.1:p.Pro96Arg
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.284C>G
  hgvsp: ENSP00000400565.1:p.Pro95Arg
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.233C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.664C>G
  hgvsp: ENSP00000416889.1:p.Pro222Arg
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1949C>G
  hgvsp: ENSP00000367243.3:p.Pro650Arg
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5112
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14377
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3513
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4585
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21576
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro650Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/5-142526928-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526928
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526928
    reference: chr 5
allele count: 3
allele frequency: 2.492481015602931e-5
allele num: 120362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.254C>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1970C>A
  hgvsp: ENSP00000274498.4:p.Pro657His
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.305C>A
  hgvsp: ENSP00000400565.1:p.Pro102His
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.308C>A
  hgvsp: ENSP00000413283.1:p.Pro103His
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.826C>A
  hgvsp: ENSP00000393276.1:p.Pro276His
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.685C>A
  hgvsp: ENSP00000416889.1:p.Pro229His
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1970C>A
  hgvsp: ENSP00000367243.3:p.Pro657His
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17249
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6033
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5347
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19996
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7710
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro657His
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

5-142526933-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526933
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526933
    reference: chr 5
allele count: 3
allele frequency: 2.498168010125908e-5
allele num: 120088
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.313C>T
  hgvsp: ENSP00000413283.1:p.Arg105Trp
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.831C>T
  hgvsp: ENSP00000393276.1:p.Arg278Trp
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.690C>T
  hgvsp: ENSP00000416889.1:p.Arg231Trp
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.310C>T
  hgvsp: ENSP00000400565.1:p.Arg104Trp
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1975C>T
  hgvsp: ENSP00000274498.4:p.Arg659Trp
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1975C>T
  hgvsp: ENSP00000367243.3:p.Arg659Trp
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.259C>T
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2811
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4569
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19685
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3485
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7659
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg659Trp
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

5-142526934-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526934
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526934
    reference: chr 5
allele count: 20
allele frequency: 1.665584037042589e-4
allele num: 120078
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1976G>A
  hgvsp: ENSP00000274498.4:p.Arg659Gln
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.832G>A
  hgvsp: ENSP00000393276.1:p.Arg278Gln
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1976G>A
  hgvsp: ENSP00000367243.3:p.Arg659Gln
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.691G>A
  hgvsp: ENSP00000416889.1:p.Arg231Gln
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.311G>A
  hgvsp: ENSP00000400565.1:p.Arg104Gln
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.260G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.314G>A
  hgvsp: ENSP00000413283.1:p.Arg105Gln
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17181
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2811
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5095
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5333
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3196
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1287
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7661
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg659Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

5-142526955-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526955
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526955
    reference: chr 5
allele count: 15
allele frequency: 1.262201279030629e-4
allele num: 118840
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+9G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+9G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.281G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.323+9G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+9G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+9G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+9G>A
  variant of: http://identifiers.org/hgnc/17073
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2805
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2463
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16304
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4734
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8438
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17781
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3415
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2483
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3182
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

5-142526957-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526957
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526958
    reference: chr 5
allele count: 1
allele frequency: 8.424599831508003e-6
allele num: 118700
alternate allele: TG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+12dupG
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+12dupG
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+12dupG
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.284dupG
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.323+12dupG
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+12dupG
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+12dupG
  variant of: http://identifiers.org/hgnc/17073
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 8436
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4567
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5078
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2166
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7436
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2611
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17397
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5256
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum

5-142526958-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526958
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526958
    reference: chr 5
allele count: 1
allele frequency: 8.429002511842749e-6
allele num: 118638
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+12G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+12G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+12G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.284G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.323+12G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+12G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+12G>A
  variant of: http://identifiers.org/hgnc/17073
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13893
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3407
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5243
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7419
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3181
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

5-142526962-AGCT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526962
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526959
    reference: chr 5
allele count: 1
allele frequency: 8.445375312478886e-6
allele num: 118408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.291_293delTGC
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+19_844+21delTGC
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+19_1988+21delTGC
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+19_1988+21delTGC
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+19_326+21delTGC
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.323+19_323+21delTGC
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+19_703+21delTGC
  variant of: http://identifiers.org/hgnc/17073
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2896
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13784
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3179
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4522
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2768
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7367
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: AGCT
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

5-142526967-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526967
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526967
    reference: chr 5
allele count: 102
allele frequency: 8.647585458491589e-4
allele num: 117952
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+21C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.323+21C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+21C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+21C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.293C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+21C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+21C>T
  variant of: http://identifiers.org/hgnc/17073
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8373
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 5036
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15615
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 13621
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2791
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 2142
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2951
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5166
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11951
  bin: 9.75e1
  variant carriers: 102
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum

5-142526971-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526971
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526971
    reference: chr 5
allele count: 53
allele frequency: 4.505270316218973e-4
allele num: 117640
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+25C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+25C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+25C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+25C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.297C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+25C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.323+25C>T
  variant of: http://identifiers.org/hgnc/17073
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 13468
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15361
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5016
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4268
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8344
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11888
  bin: 9.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

5-142526971-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526971
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526971
    reference: chr 5
allele count: 3
allele frequency: 2.550153009180551e-5
allele num: 117640
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+25C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+25C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+25C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+25C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+25C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.297C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.323+25C>G
  variant of: http://identifiers.org/hgnc/17073
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3462
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15361
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8344
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3012
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11888
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/5-142526974-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526974
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526974
    reference: chr 5
allele count: 2
allele frequency: 1.703084285641296e-5
allele num: 117434
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+28C>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+28C>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.323+28C>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.300C>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+28C>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+28C>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+28C>A
  variant of: http://identifiers.org/hgnc/17073
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15121
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3134
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4442
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7029
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1224
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

5-142526974-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526974
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526974
    reference: chr 5
allele count: 6
allele frequency: 5.109252856923889e-5
allele num: 117434
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+28C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+28C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+28C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.300C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+28C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.323+28C>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+28C>G
  variant of: http://identifiers.org/hgnc/17073
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8314
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15121
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5078
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1224
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3159
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-142526974-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526974
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526974
    reference: chr 5
allele count: 3
allele frequency: 2.554626428461945e-5
allele num: 117434
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.323+28C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+28C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+28C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+28C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+28C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.300C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+28C>T
  variant of: http://identifiers.org/hgnc/17073
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15121
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5006
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13354
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7029
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3134
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5078
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3159
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4442
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3268
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

5-142526975-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526975
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526975
    reference: chr 5
allele count: 81
allele frequency: 6.899606466890407e-4
allele num: 117398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+29A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+29A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.301A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.323+29A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+29A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+29A>G
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+29A>G
  variant of: http://identifiers.org/hgnc/17073
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13275
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 8290
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15014
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1895
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5003
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 2.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 7008
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3252
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4436
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5068
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

5-142526981-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526981
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526981
    reference: chr 5
allele count: 60
allele frequency: 5.138482092389908e-4
allele num: 116766
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+35G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+35G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+35G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.323+35G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+35G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.307G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+35G>A
  variant of: http://identifiers.org/hgnc/17073
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1388
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3797
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8175
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 13666
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12517
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4989
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3777
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4136
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13237
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6462
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3010
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1181
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1712
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1548
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4970
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

5-142526991-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142526991
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142526991
    reference: chr 5
allele count: 3
allele frequency: 2.585449092507368e-5
allele num: 116034
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+45G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+45G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+45G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.323+45G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+45G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000489924
  gene symbol: ARHGAP26
  hgvsc: ENST00000489924.1:n.317G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+45G>A
  variant of: http://identifiers.org/hgnc/17073
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4695
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11706
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7994
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4942
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2229
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1951
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3126
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4349
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2087
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2833
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2092
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/5-142545554-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142545554
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142545554
    reference: chr 5
allele count: 1
allele frequency: 8.854258898530193e-5
allele num: 11294
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+18608A>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+18608A>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.324-38A>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+18608A>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+18608A>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+18608A>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000486650
  gene symbol: ARHGAP26
  hgvsc: ENST00000486650.1:n.532+545A>C
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1026
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

5-142545575-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142545575
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142545575
    reference: chr 5
allele count: 72
allele frequency: 5.797101449275362e-3
allele num: 12420
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.324-17C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+18629C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000486650
  gene symbol: ARHGAP26
  hgvsc: ENST00000486650.1:n.532+566C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+18629C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+18629C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+18629C>T
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+18629C>T
  variant of: http://identifiers.org/hgnc/17073
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2861
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1741
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 2
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

5-142545596-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142545596
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142545596
    reference: chr 5
allele count: 1
allele frequency: 7.285443683520327e-5
allele num: 13726
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+18650T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+18650T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.328T>C
  hgvsp: ENSP00000400565.1:p.Trp110Arg
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+18650T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+18650T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+18650T>C
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000486650
  gene symbol: ARHGAP26
  hgvsc: ENST00000486650.1:n.532+587T>C
  variant of: http://identifiers.org/hgnc/17073
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1811
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4284
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Trp110Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

5-142545649-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 142545649
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 142545649
    reference: chr 5
allele count: 1
allele frequency: 7.210845111047014e-5
allele num: 13868
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000393276
  ensembl transcript: ENST00000443674
  gene symbol: ARHGAP26
  hgvsc: ENST00000443674.1:c.844+18703G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000413283
  ensembl transcript: ENST00000419676
  gene symbol: ARHGAP26
  hgvsc: ENST00000419676.1:c.326+18703G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000367243
  ensembl transcript: ENST00000378004
  gene symbol: ARHGAP26
  hgvsc: ENST00000378004.3:c.1988+18703G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000274498
  ensembl transcript: ENST00000274498
  gene symbol: ARHGAP26
  hgvsc: ENST00000274498.4:c.1988+18703G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000416889
  ensembl transcript: ENST00000418236
  gene symbol: ARHGAP26
  hgvsc: ENST00000418236.1:c.703+18703G>A
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000145819
  ensembl protein: ENSP00000400565
  ensembl transcript: ENST00000424007
  gene symbol: ARHGAP26
  hgvsc: ENST00000424007.1:c.381G>A
  hgvsp: ENST00000424007.1:c.381G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17073
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000145819
  ensembl transcript: ENST00000486650
  gene symbol: ARHGAP26
  hgvsc: ENST00000486650.1:n.532+640G>A
  variant of: http://identifiers.org/hgnc/17073
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser127Ser
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6290
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 1.057285659361784e-3
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.336e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.44e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.186331e6

MQRankSum
type: SiteQuality
SIO_000300: 2.49e-1

MQ
type: SiteQuality
SIO_000300: 5.988e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.044e0

VQSLOD
type: SiteQuality
SIO_000300: 5.61e0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6290
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.070171178827243e-5
allele num: 16474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.49e-1

QD
type: SiteQuality
SIO_000300: 1.336e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.988e1

VQSLOD
type: SiteQuality
SIO_000300: 5.61e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.186331e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.044e0

GenotypeQuality
all individuals: 353
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.50480307396734e-5
allele num: 66624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159017153453871e-4
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.8e-1

FS
type: SiteQuality
SIO_000300: 1.211e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

QD
type: SiteQuality
SIO_000300: 1.147e1

DP
type: SiteQuality
SIO_000300: 5.18488e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.0e-1

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6227
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501005673801447e-5
allele num: 66622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 5.184571e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.27e-1

QD
type: SiteQuality
SIO_000300: 1.477e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.599e0

GenotypeQuality
all individuals: 89
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51025
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 92
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 905
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.181393e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.09e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 3.343e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.802e0

QD
type: SiteQuality
SIO_000300: 9.300000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 4.69e-1

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 890
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51026
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 5841
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.11545988258317e-5
allele num: 16352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.883506343713956e-4
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66580
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.180365e6

QD
type: SiteQuality
SIO_000300: 1.314e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

FS
type: SiteQuality
SIO_000300: 1.135e0

VQSLOD
type: SiteQuality
SIO_000300: 9.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.37e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-1

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51025
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 544
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 887
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.63821892393321e-4
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502178158329578e-5
allele num: 66570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.181e0

MQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

FS
type: SiteQuality
SIO_000300: 5.53e-1

QD
type: SiteQuality
SIO_000300: 1.072e1

DP
type: SiteQuality
SIO_000300: 5.18011e6

GenotypeQuality
all individuals: 471
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51025
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 544
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502178158329578e-5
allele num: 66570
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728011059270779e-4
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16344
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.181e0

FS
type: SiteQuality
SIO_000300: 5.53e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

DP
type: SiteQuality
SIO_000300: 5.18011e6

QD
type: SiteQuality
SIO_000300: 1.072e1

GenotypeQuality
all individuals: 124
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51022
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 327
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160362032954282e-4
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66540
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16238
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.23e0

DP
type: SiteQuality
SIO_000300: 5.17474e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.74e-1

QD
type: SiteQuality
SIO_000300: 1.461e1

FS
type: SiteQuality
SIO_000300: 7.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.14e-1

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5205
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51022
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 96
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.167509559639817e-5
allele num: 16214
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66522
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.320185614849188e-4
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.296e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

FS
type: SiteQuality
SIO_000300: 5.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.99e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.45e-1

DP
type: SiteQuality
SIO_000300: 5.173734e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.620000000000001e-1

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 324
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variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 22
allele frequency: 1.900812165197857e-3
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.503126503126503e-4
allele num: 66528
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.02e0

FS
type: SiteQuality
SIO_000300: 1.881e0

DP
type: SiteQuality
SIO_000300: 5.17303e6

QD
type: SiteQuality
SIO_000300: 1.347e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.408e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
all individuals: 110
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 442
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variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 14
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 299
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variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66476
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.241927471435668e-4
allele num: 16104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.058e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.975e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 6.55e0

MQRankSum
type: SiteQuality
SIO_000300: -6.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

DP
type: SiteQuality
SIO_000300: 5.162872e6

QD
type: SiteQuality
SIO_000300: 1.612e1

GenotypeQuality
all individuals: 317
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 440
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GenotypeQuality
all individuals: 951
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
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GenotypeQuality
all individuals: 474
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GenotypeQuality
all individuals: 483
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GenotypeQuality
all individuals: 758
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GenotypeQuality
all individuals: 278
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variant carriers: 0

GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
all individuals: 97
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variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.48849073037203e-4
allele num: 16074
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.89e-1

FS
type: SiteQuality
SIO_000300: 1.035e0

QD
type: SiteQuality
SIO_000300: 1.087e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.586e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 5.162112e6

MQ
type: SiteQuality
SIO_000300: 5.961e1

MQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.4e0

GenotypeQuality
all individuals: 376
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 313
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GenotypeQuality
all individuals: 440
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GenotypeQuality
all individuals: 51021
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 545
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 277
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.320724065908564e-4
allele num: 8618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66472
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.9e-2

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.03e-1

FS
type: SiteQuality
SIO_000300: 3.401e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.124e1

DP
type: SiteQuality
SIO_000300: 5.160773e6

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 46
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GenotypeQuality
all individuals: 60
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GenotypeQuality
all individuals: 271
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GenotypeQuality
all individuals: 545
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GenotypeQuality
all individuals: 276
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GenotypeQuality
all individuals: 427
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GenotypeQuality
all individuals: 768
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505434618974498e-5
allele num: 66426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15888
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.150207e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

QD
type: SiteQuality
SIO_000300: 1.196e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

VQSLOD
type: SiteQuality
SIO_000300: 4.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.95e-1

GenotypeQuality
all individuals: 31
bin: 1.25e1
variant carriers: 16

GenotypeQuality
all individuals: 813
bin: 6.25e1
variant carriers: 233

GenotypeQuality
all individuals: 460
bin: 9.25e1
variant carriers: 137

GenotypeQuality
all individuals: 269
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variant carriers: 249

GenotypeQuality
all individuals: 302
bin: 4.75e1
variant carriers: 280

GenotypeQuality
all individuals: 257
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variant carriers: 102

GenotypeQuality
all individuals: 258
bin: 7.25e1
variant carriers: 135

GenotypeQuality
all individuals: 315
bin: 3.25e1
variant carriers: 161

GenotypeQuality
all individuals: 55159
bin: 9.75e1
variant carriers: 44627

GenotypeQuality
all individuals: 366
bin: 7.75e1
variant carriers: 176

European (Non-Finnish)
type: Population
allele count: 40456
allele frequency: 6.097913903291933e-1
allele num: 66344
num of homozygotes: 12328

Other
type: Population
allele count: 498
allele frequency: 5.608108108108109e-1
allele num: 888
num of homozygotes: 140

Latino
type: Population
allele count: 3348
allele frequency: 2.895692786715101e-1
allele num: 11562
num of homozygotes: 570

South Asian
type: Population
allele count: 8890
allele frequency: 5.698717948717948e-1
allele num: 15600
num of homozygotes: 2509

East Asian
type: Population
allele count: 2969
allele frequency: 3.453128634566178e-1
allele num: 8598
num of homozygotes: 502

European (Finnish)
type: Population
allele count: 3907
allele frequency: 5.908953418027828e-1
allele num: 6612
num of homozygotes: 1151

African
type: Population
allele count: 5362
allele frequency: 5.163713405238829e-1
allele num: 10384
num of homozygotes: 1387

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.44e0

FS
type: SiteQuality
SIO_000300: 6.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.06e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e-1

QD
type: SiteQuality
SIO_000300: 2.232e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.38e-1

DP
type: SiteQuality
SIO_000300: 5.073636e6

GenotypeQuality
all individuals: 1245
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1909
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
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GenotypeQuality
all individuals: 85
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GenotypeQuality
all individuals: 161
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variant carriers: 0

GenotypeQuality
all individuals: 62
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GenotypeQuality
all individuals: 1533
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GenotypeQuality
all individuals: 3105
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44601
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 385
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13564
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.17096018735363e-3
allele num: 854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65506
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.316e0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: 1.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

QD
type: SiteQuality
SIO_000300: 9.539999999999999e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e-1

DP
type: SiteQuality
SIO_000300: 3.427875e6

GenotypeQuality
all individuals: 1532
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3128
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 727
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 876
bin: 3.25e1
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GenotypeQuality
all individuals: 44599
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1238
bin: 7.75e1
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GenotypeQuality
all individuals: 892
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GenotypeQuality
all individuals: 2455
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.158508158508159e-4
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.73e-1

QD
type: SiteQuality
SIO_000300: 1.054e1

DP
type: SiteQuality
SIO_000300: 3.425583e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.092e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.43e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

GenotypeQuality
all individuals: 186
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1162
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527510463446675e-5
allele num: 65466
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.362e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.423274e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.212e1

GenotypeQuality
all individuals: 595
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1901
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 45
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GenotypeQuality
all individuals: 603
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536428725071444e-5
allele num: 65086
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12556
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.855e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.04e-1

QD
type: SiteQuality
SIO_000300: 7.33e0

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

DP
type: SiteQuality
SIO_000300: 3.408478e6

GenotypeQuality
all individuals: 1764
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5317
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variant carriers: 0

GenotypeQuality
all individuals: 12174
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.479431563201197e-5
allele num: 13370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
SIO_000300: -9.871e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.116e0

DP
type: SiteQuality
SIO_000300: 2.042812e6

MQRankSum
type: SiteQuality
SIO_000300: -4.37e-1

FS
type: SiteQuality
SIO_000300: 3.942e0

GenotypeQuality
all individuals: 155
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7513
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3195
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 5316
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variant carriers: 0

GenotypeQuality
all individuals: 649
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variant carriers: 0

South Asian
type: Population
allele count: 34
allele frequency: 2.512191517659228e-3
allele num: 13534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166588894073728e-4
allele num: 8572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65672
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.34e-1

QD
type: SiteQuality
SIO_000300: 1.53e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

DP
type: SiteQuality
SIO_000300: 2.046887e6

VQSLOD
type: SiteQuality
SIO_000300: 4.34e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 100
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 148
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GenotypeQuality
all individuals: 92
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variant carriers: 0

GenotypeQuality
all individuals: 5319
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variant carriers: 0

GenotypeQuality
all individuals: 3452
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variant carriers: 0

GenotypeQuality
all individuals: 2178
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 17
allele frequency: 1.641877535252077e-3
allele num: 10354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65670
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.09e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

QD
type: SiteQuality
SIO_000300: 1.79e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.1e-2

DP
type: SiteQuality
SIO_000300: 2.046729e6

MQ
type: SiteQuality
SIO_000300: 5.737e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

GenotypeQuality
all individuals: 1971
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17505
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
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variant carriers: 0

GenotypeQuality
all individuals: 3198
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variant carriers: 0

GenotypeQuality
all individuals: 5318
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variant carriers: 0

GenotypeQuality
all individuals: 79
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variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2177
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variant carriers: 0

GenotypeQuality
all individuals: 7528
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65692
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.671522719389525e-5
allele num: 11532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13546
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.73e0

DP
type: SiteQuality
SIO_000300: 2.047911e6

MQ
type: SiteQuality
SIO_000300: 5.975e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.23e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.92e0

VQSLOD
type: SiteQuality
SIO_000300: -7.894e-1

QD
type: SiteQuality
SIO_000300: 1.781e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 107
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 12144
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variant carriers: 1

GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1970
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variant carriers: 0

GenotypeQuality
all individuals: 4581
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13700
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521653123953863e-5
allele num: 65718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.94e-1

QD
type: SiteQuality
SIO_000300: 1.325e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.053301e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.080000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.739e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 12019
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 3199
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.212378383293426e-4
allele num: 65986
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.89073039121218e-4
allele num: 10378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.54e-1

QD
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

DP
type: SiteQuality
SIO_000300: 2.088746e6

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.29e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2181
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variant carriers: 0

GenotypeQuality
all individuals: 244
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variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 2.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14844
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.89073039121218e-4
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.970114872851817e-4
allele num: 65986
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.488372093023256e-4
allele num: 8600
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.39e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.09e0

DP
type: SiteQuality
SIO_000300: 2.088746e6

GenotypeQuality
all individuals: 143
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variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 2.5e0
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GenotypeQuality
all individuals: 48
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GenotypeQuality
all individuals: 5358
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GenotypeQuality
all individuals: 245
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GenotypeQuality
all individuals: 19333
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11998
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 7689
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GenotypeQuality
all individuals: 2181
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516622179082747e-5
allele num: 65936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.089782e6

VQSLOD
type: SiteQuality
SIO_000300: -2.121e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e0

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.853e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.573e0

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

FS
type: SiteQuality
SIO_000300: 9.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 189
bin: 3.75e1
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GenotypeQuality
all individuals: 3497
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161710037174721e-4
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66214
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.46e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.149999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.62e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

QD
type: SiteQuality
SIO_000300: 1.187e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.707e0

DP
type: SiteQuality
SIO_000300: 2.077681e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729804532087874e-4
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.112251056125528e-4
allele num: 66280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.484320557491289e-4
allele num: 8610
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.72e-1

FS
type: SiteQuality
SIO_000300: 1.188e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.19e-1

QD
type: SiteQuality
SIO_000300: 1.111e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.537e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 2.081175e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
all individuals: 3199
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.822227972570837e-4
allele num: 15458
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.082242e6

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-1

QD
type: SiteQuality
SIO_000300: 1.113e1

FS
type: SiteQuality
SIO_000300: 1.201e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: -2.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.781e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.93e-1

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7795
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2178
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GenotypeQuality
all individuals: 3506
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.284026707755521e-4
allele num: 15576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.88e-1

FS
type: SiteQuality
SIO_000300: 4.363e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.68e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e-1

QD
type: SiteQuality
SIO_000300: 1.027e1

DP
type: SiteQuality
SIO_000300: 2.083261e6

GenotypeQuality
all individuals: 2179
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 618
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variant carriers: 0

GenotypeQuality
all individuals: 126
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GenotypeQuality
all individuals: 12
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 105
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506387081224391e-5
allele num: 66384
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15756
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.859e0

VQSLOD
type: SiteQuality
SIO_000300: 1.26e-1

DP
type: SiteQuality
SIO_000300: 2.087047e6

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.094e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

FS
type: SiteQuality
SIO_000300: 5.405e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e0

QD
type: SiteQuality
SIO_000300: 1.591e1

GenotypeQuality
all individuals: 4593
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 43
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501726986033939e-5
allele num: 66590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.09e-1

QD
type: SiteQuality
SIO_000300: 9.27e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.558e0

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.844e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

DP
type: SiteQuality
SIO_000300: 2.098561e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.072382803011902e-5
allele num: 16468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66642
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.878e1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: -2.419e0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.48e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.102477e6

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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QD
type: SiteQuality
SIO_000300: 1.315e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-1

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 1
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allele num: 8622
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South Asian
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MQRankSum
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ReadPosRankSum
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FS
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ClippingRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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DP
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BaseQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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QD
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele frequency: 2.882952142994427e-4
allele num: 10406
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
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BaseQRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQRankSum
type: SiteQuality
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MQ
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SIO_000300: 5.921e1

FS
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ReadPosRankSum
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VQSLOD
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QD
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DP
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele num: 16506
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: 2.12e0

DP
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QD
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ReadPosRankSum
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 5.49e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.93e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10404
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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Other
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South Asian
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ClippingRankSum
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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SIO_000300: 2.27e0

MQ
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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VQSLOD
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FS
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ClippingRankSum
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MQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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allele num: 16508
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African
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Other
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European (Non-Finnish)
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QD
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MQRankSum
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FS
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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DP
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InbreedingCoeff
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 0.0e0
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Latino
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South Asian
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European (Non-Finnish)
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allele num: 66698
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ClippingRankSum
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DP
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FS
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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VQSLOD
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Latino
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Other
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East Asian
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African
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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FS
type: SiteQuality
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DP
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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South Asian
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BaseQRankSum
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MQ
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ReadPosRankSum
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QD
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SIO_000300: 1.14e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 2.101566e6

FS
type: SiteQuality
SIO_000300: 1.531e0

MQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.120000000000001e-1

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5358
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3510
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.423361201987156e-4
allele num: 16506
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.59e-1

DP
type: SiteQuality
SIO_000300: 2.101582e6

FS
type: SiteQuality
SIO_000300: 1.889e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.69e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

QD
type: SiteQuality
SIO_000300: 1.473e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.212e0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7880
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3199
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.97e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.212e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

DP
type: SiteQuality
SIO_000300: 2.101582e6

FS
type: SiteQuality
SIO_000300: 1.889e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

QD
type: SiteQuality
SIO_000300: 1.473e1

GenotypeQuality
all individuals: 21641
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7877
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12085
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3199
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.424242424242424e-4
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.45e-1

FS
type: SiteQuality
SIO_000300: 3.071e0

QD
type: SiteQuality
SIO_000300: 1.722e1

DP
type: SiteQuality
SIO_000300: 2.10133e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5353
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499790029395885e-5
allele num: 66676
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.004e1

VQSLOD
type: SiteQuality
SIO_000300: 5.79e-1

FS
type: SiteQuality
SIO_000300: 8.43e-1

DP
type: SiteQuality
SIO_000300: 2.100529e6

MQ
type: SiteQuality
SIO_000300: 5.949e1

MQRankSum
type: SiteQuality
SIO_000300: 5.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.106e0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3196
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3503
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7863
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.885170225043277e-4
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.821714840903571e-4
allele num: 16468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 92
allele frequency: 1.379931003449827e-3
allele num: 66670
num of homozygotes: 1

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.306e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.79e-1

FS
type: SiteQuality
SIO_000300: 1.878e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.01e-2

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 3.82e0

DP
type: SiteQuality
SIO_000300: 2.101871e6

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.323e1

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5364
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7866
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 2.096635e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.884e1

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: -9.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.338e0

QD
type: SiteQuality
SIO_000300: 1.556e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923816852635629e-4
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.289308176100629e-5
allele num: 15900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66430
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.64e-1

QD
type: SiteQuality
SIO_000300: 1.266e1

DP
type: SiteQuality
SIO_000300: 2.079484e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

FS
type: SiteQuality
SIO_000300: 4.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.55e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11991
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 132
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GenotypeQuality
all individuals: 3195
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GenotypeQuality
all individuals: 92
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variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.731002250302925e-4
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66346
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.352432981832041e-5
allele num: 15742
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.945e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

DP
type: SiteQuality
SIO_000300: 2.074221e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.08e1

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
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variant carriers: 0

GenotypeQuality
all individuals: 103
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GenotypeQuality
all individuals: 89
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variant carriers: 0

GenotypeQuality
all individuals: 48
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GenotypeQuality
all individuals: 22
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GenotypeQuality
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GenotypeQuality
all individuals: 3480
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GenotypeQuality
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variant carriers: 20

GenotypeQuality
all individuals: 4566
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19797
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.014590618593995e-5
allele num: 66344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.270809505655102e-4
allele num: 15738
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 16
allele frequency: 1.870907390084191e-3
allele num: 8552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

VQSLOD
type: SiteQuality
SIO_000300: 3.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.49e-1

FS
type: SiteQuality
SIO_000300: 1.253e0

MQRankSum
type: SiteQuality
SIO_000300: 1.36e-1

DP
type: SiteQuality
SIO_000300: 2.073675e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.169e1

GenotypeQuality
all individuals: 7447
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5257
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2165
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4539
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11957
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 377
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66022
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14920
num of homozygotes: 0

East Asian
type: Population
allele count: 15
allele frequency: 1.757675181626435e-3
allele num: 8534
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.374e0

QD
type: SiteQuality
SIO_000300: 1.264e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.372e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.95e-1

DP
type: SiteQuality
SIO_000300: 2.039889e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.96e-1

GenotypeQuality
all individuals: 137
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4536
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11945
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 756
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3183
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.685079034219212e-5
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e0

MQRankSum
type: SiteQuality
SIO_000300: 1.96e0

DP
type: SiteQuality
SIO_000300: 2.034249e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.982e0

QD
type: SiteQuality
SIO_000300: 1.074e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.02e-1

GenotypeQuality
all individuals: 2640
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4536
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11943
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2165
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17335
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515840533575868e-5
allele num: 65970
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14788
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.042e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.89e-1

DP
type: SiteQuality
SIO_000300: 2.03293e6

FS
type: SiteQuality
SIO_000300: 2.712e0

MQRankSum
type: SiteQuality
SIO_000300: 1.69e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e-1

QD
type: SiteQuality
SIO_000300: 1.446e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.93e-1

MQ
type: SiteQuality
SIO_000300: 5.921e1

GenotypeQuality
all individuals: 66
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11934
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2161
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3385
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5221
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17130
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517220452131695e-5
allele num: 65910
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.946e0

FS
type: SiteQuality
SIO_000300: 4.107e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

DP
type: SiteQuality
SIO_000300: 2.025839e6

MQ
type: SiteQuality
SIO_000300: 5.677e1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.649e0

QD
type: SiteQuality
SIO_000300: 1.561e1

GenotypeQuality
all individuals: 4490
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3167
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3348
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16712
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7259
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.70170553428472e-5
allele num: 11492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.767208043310132e-4
allele num: 10344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 93
allele frequency: 1.413244992857794e-3
allele num: 65806
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.976419701409237e-5
allele num: 14334
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.292e1

VQSLOD
type: SiteQuality
SIO_000300: 4.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

FS
type: SiteQuality
SIO_000300: 1.504e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

DP
type: SiteQuality
SIO_000300: 2.015295e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

GenotypeQuality
all individuals: 4464
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16231
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 949
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3309
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3012
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5117
bin: 7.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14142
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.612330198537095e-4
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 50
allele frequency: 7.608034083992696e-4
allele num: 65720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.268e1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.003563e6

VQSLOD
type: SiteQuality
SIO_000300: 5.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.618e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-2

GenotypeQuality
all individuals: 5117
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16231
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3309
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2126
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4464
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14142
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.564820450395618e-5
allele num: 65720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 2.003563e6

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.618e0

QD
type: SiteQuality
SIO_000300: 1.268e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 15972
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5078
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11830
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 211
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3268
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2124
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3159
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13996
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522858100082234e-5
allele num: 65666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.17426021606388e-4
allele num: 8516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e-1

QD
type: SiteQuality
SIO_000300: 1.396e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.506e0

DP
type: SiteQuality
SIO_000300: 1.995019e6

VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.5e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3134
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7029
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2124
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11830
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 152
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4442
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15972
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3268
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.045716200164469e-5
allele num: 65666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13996
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.903038513644281e-4
allele num: 10334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.152073732718894e-3
allele num: 868
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e-1

QD
type: SiteQuality
SIO_000300: 1.396e1

DP
type: SiteQuality
SIO_000300: 1.995019e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.506e0

GenotypeQuality
all individuals: 1011
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15972
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1224
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11830
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2124
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.568574300246703e-5
allele num: 65666
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13996
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

QD
type: SiteQuality
SIO_000300: 1.396e1

DP
type: SiteQuality
SIO_000300: 1.995019e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.5e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.506e0

GenotypeQuality
all individuals: 3134
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3153
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15800
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11861
bin: 9.75e1
variant carriers: 79

GenotypeQuality
all individuals: 2121
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1285
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 66
allele frequency: 6.385448916408669e-3
allele num: 10336
num of homozygotes: 1

South Asian
type: Population
allele count: 1
allele frequency: 7.151029748283753e-5
allele num: 13984
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523368472366096e-5
allele num: 65644
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.157407407407407e-3
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
type: Population
allele count: 12
allele frequency: 1.045842774969496e-3
allele num: 11474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

FS
type: SiteQuality
SIO_000300: 7.26e-1

QD
type: SiteQuality
SIO_000300: 1.4e1

MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 4.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

DP
type: SiteQuality
SIO_000300: 1.991864e6

GenotypeQuality
all individuals: 424
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 645
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2108
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4409
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3128
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3139
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11820
bin: 9.75e1
variant carriers: 60

European (Finnish)
type: Population
allele count: 9
allele frequency: 1.369446135118685e-3
allele num: 6572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.876720294630742e-4
allele num: 10318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 47
allele frequency: 7.179737863187804e-4
allele num: 65462
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13602
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

QD
type: SiteQuality
SIO_000300: 1.376e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.848e0

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

DP
type: SiteQuality
SIO_000300: 1.959417e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.28e-1

GenotypeQuality
all individuals: 10642
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1212
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4864
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11758
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5896
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2979
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1484
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65234
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.915451895043732e-4
allele num: 10290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13200
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.233e0

VQSLOD
type: SiteQuality
SIO_000300: 2.7e-1

DP
type: SiteQuality
SIO_000300: 1.921125e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

MQ
type: SiteQuality
SIO_000300: 5.977e1

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

FS
type: SiteQuality
SIO_000300: 6.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

QD
type: SiteQuality
SIO_000300: 1.624e1

GenotypeQuality
all individuals: 27
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1480
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1788
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 941
bin: 3.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.362948960302458e-4
allele num: 4232
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.945e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.323e0

DP
type: SiteQuality
SIO_000300: 2.12811e5

VQSLOD
type: SiteQuality
SIO_000300: -5.773e2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.81e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.71e-1

FS
type: SiteQuality
SIO_000300: 3.54449e2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.75e0

QD
type: SiteQuality
SIO_000300: 2.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.927e0

GenotypeQuality
all individuals: 352
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1846
bin: 9.75e1
variant carriers: 68

GenotypeQuality
all individuals: 34
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 17
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.128668171557562e-3
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 1.08695652173913e-2
allele num: 276
num of homozygotes: 0

East Asian
type: Population
allele count: 36
allele frequency: 7.468879668049792e-2
allele num: 482
num of homozygotes: 1

South Asian
type: Population
allele count: 26
allele frequency: 4.26509186351706e-3
allele num: 6096
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 1.5625e-2
allele num: 128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.845643520566122e-4
allele num: 4522
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.37e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.11e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

QD
type: SiteQuality
SIO_000300: 1.17e1

MQRankSum
type: SiteQuality
SIO_000300: 1.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.74e-1

DP
type: SiteQuality
SIO_000300: 2.42321e5

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.45e0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.055921052631579e-4
allele num: 4864
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7008
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 152
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e0

MQ
type: SiteQuality
SIO_000300: 5.773e1

QD
type: SiteQuality
SIO_000300: 8.710000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.73e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.081e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-2

DP
type: SiteQuality
SIO_000300: 2.58276e5

MQRankSum
type: SiteQuality
SIO_000300: 6.08e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.245e0