9-135975657-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975657
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975657
    reference: chr 9
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2564G>A
  hgvsp: ENSP00000376864.3:p.Arg855Gln
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.3046G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.276G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2780G>A
  hgvsp: ENSP00000437518.1:p.Arg927Gln
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3267G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2531G>A
  hgvsp: ENSP00000361117.3:p.Arg844Gln
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2480G>A
  hgvsp: ENSP00000361132.3:p.Arg827Gln
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2402G>A
  hgvsp: ENSP00000376867.3:p.Arg801Gln
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.176G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3557G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.508G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2567G>A
  hgvsp: ENSP00000361120.3:p.Arg856Gln
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5700
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6755
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg856Gln
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

9-135975658-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975658
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975658
    reference: chr 9
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2401C>T
  hgvsp: ENSP00000376867.3:p.Arg801Trp
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3556C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.507C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2563C>T
  hgvsp: ENSP00000376864.3:p.Arg855Trp
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2779C>T
  hgvsp: ENSP00000437518.1:p.Arg927Trp
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.275C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2479C>T
  hgvsp: ENSP00000361132.3:p.Arg827Trp
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2530C>T
  hgvsp: ENSP00000361117.3:p.Arg844Trp
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3266C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2566C>T
  hgvsp: ENSP00000361120.3:p.Arg856Trp
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.3045C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.175C>T
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4542
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6754
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg856Trp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

9-135975658-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975658
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975658
    reference: chr 9
allele count: 91
allele frequency: 7.495263981550119e-4
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3266C>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2401C>A
  hgvsp: ENST00000393160.3:c.2401C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3556C>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2479C>A
  hgvsp: ENST00000372062.3:c.2479C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.175C>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2779C>A
  hgvsp: ENST00000542690.1:c.2779C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2566C>A
  hgvsp: ENST00000372050.3:c.2566C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.3045C>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2563C>A
  hgvsp: ENST00000393157.3:c.2563C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2530C>A
  hgvsp: ENST00000372047.3:c.2530C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.275C>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.507C>A
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5699
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6754
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 9.75e1
  variant carriers: 91
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2382
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6978
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg856Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum

9-135975665-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975665
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975665
    reference: chr 9
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.268A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2772A>G
  hgvsp: ENST00000542690.1:c.2772A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.500A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.168A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2556A>G
  hgvsp: ENST00000393157.3:c.2556A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2523A>G
  hgvsp: ENST00000372047.3:c.2523A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2472A>G
  hgvsp: ENST00000372062.3:c.2472A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2394A>G
  hgvsp: ENST00000393160.3:c.2394A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2559A>G
  hgvsp: ENST00000372050.3:c.2559A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3549A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.3038A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3259A>G
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5709
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7607
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6983
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser853Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

9-135975666-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975666
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975666
    reference: chr 9
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.167C>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2393C>A
  hgvsp: ENSP00000376867.3:p.Ser798Ter
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2555C>A
  hgvsp: ENSP00000376864.3:p.Ser852Ter
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2558C>A
  hgvsp: ENSP00000361120.3:p.Ser853Ter
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2522C>A
  hgvsp: ENSP00000361117.3:p.Ser841Ter
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2771C>A
  hgvsp: ENSP00000437518.1:p.Ser924Ter
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3258C>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.267C>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3548C>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2471C>A
  hgvsp: ENSP00000361132.3:p.Ser824Ter
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.3037C>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.499C>A
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7607
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6338
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser853Ter
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

9-135975667-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975667
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975667
    reference: chr 9
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2470T>C
  hgvsp: ENSP00000361132.3:p.Ser824Pro
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.266T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.166T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2554T>C
  hgvsp: ENSP00000376864.3:p.Ser852Pro
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3547T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2392T>C
  hgvsp: ENSP00000376867.3:p.Ser798Pro
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2557T>C
  hgvsp: ENSP00000361120.3:p.Ser853Pro
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2521T>C
  hgvsp: ENSP00000361117.3:p.Ser841Pro
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2770T>C
  hgvsp: ENSP00000437518.1:p.Ser924Pro
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.498T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.3036T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3257T>C
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7607
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6984
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser853Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

9-135975680-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975680
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975680
    reference: chr 9
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2457G>A
  hgvsp: ENST00000372062.3:c.2457G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2379G>A
  hgvsp: ENST00000393160.3:c.2379G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2544G>A
  hgvsp: ENST00000372050.3:c.2544G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2508G>A
  hgvsp: ENST00000372047.3:c.2508G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.253G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2541G>A
  hgvsp: ENST00000393157.3:c.2541G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.485G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.153G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2757G>A
  hgvsp: ENST00000542690.1:c.2757G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3534G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3244G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.3023G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6338
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6984
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu848Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

9-135975689-GTCC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975689
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975686
    reference: chr 9
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2445_2447delGGA
  hgvsp: ENSP00000361132.3:p.Glu815del
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2529_2531delGGA
  hgvsp: ENSP00000376864.3:p.Glu843del
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3522_3524delGGA
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3232_3234delGGA
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2496_2498delGGA
  hgvsp: ENSP00000361117.3:p.Glu832del
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2745_2747delGGA
  hgvsp: ENSP00000437518.1:p.Glu915del
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.141_143delGGA
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2532_2534delGGA
  hgvsp: ENSP00000361120.3:p.Glu844del
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.3011_3013delGGA
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2367_2369delGGA
  hgvsp: ENSP00000376867.3:p.Glu789del
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.473_475delGGA
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.241_243delGGA
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6985
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6337
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu844del
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: GTCC
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

9-135975691-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975691
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975691
    reference: chr 9
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3523G>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2746G>C
  hgvsp: ENSP00000437518.1:p.Asp916His
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2530G>C
  hgvsp: ENSP00000376864.3:p.Asp844His
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2533G>C
  hgvsp: ENSP00000361120.3:p.Asp845His
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.474G>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3233G>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2497G>C
  hgvsp: ENSP00000361117.3:p.Asp833His
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.142G>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2368G>C
  hgvsp: ENSP00000376867.3:p.Asp790His
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2446G>C
  hgvsp: ENSP00000361132.3:p.Asp816His
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.3012G>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.242G>C
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6337
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4057
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6985
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp845His
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

9-135975692-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975692
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975692
    reference: chr 9
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2445G>A
  hgvsp: ENST00000372062.3:c.2445G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2745G>A
  hgvsp: ENST00000542690.1:c.2745G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2496G>A
  hgvsp: ENST00000372047.3:c.2496G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2529G>A
  hgvsp: ENST00000393157.3:c.2529G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.141G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3522G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.3011G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2367G>A
  hgvsp: ENST00000393160.3:c.2367G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2532G>A
  hgvsp: ENST00000372050.3:c.2532G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.241G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.473G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3232G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6985
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6338
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu844Glu
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP

9-135975695-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975695
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975695
    reference: chr 9
allele count: 3
allele frequency: 2.471006852925672e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2526G>A
  hgvsp: ENST00000393157.3:c.2526G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3229G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2442G>A
  hgvsp: ENST00000372062.3:c.2442G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3519G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2364G>A
  hgvsp: ENST00000393160.3:c.2364G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2742G>A
  hgvsp: ENST00000542690.1:c.2742G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.238G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.138G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2493G>A
  hgvsp: ENST00000372047.3:c.2493G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.3008G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.470G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2529G>A
  hgvsp: ENST00000372050.3:c.2529G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6338
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6986
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro843Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD

9-135975696-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975696
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975696
    reference: chr 9
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.469C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2525C>T
  hgvsp: ENSP00000376864.3:p.Pro842Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.3007C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2363C>T
  hgvsp: ENSP00000376867.3:p.Pro788Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2492C>T
  hgvsp: ENSP00000361117.3:p.Pro831Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2441C>T
  hgvsp: ENSP00000361132.3:p.Pro814Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3518C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3228C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.137C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2528C>T
  hgvsp: ENSP00000361120.3:p.Pro843Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2741C>T
  hgvsp: ENSP00000437518.1:p.Pro914Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.237C>T
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3310
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6986
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7608
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro843Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS

9-135975697-GCTC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975697
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975694
    reference: chr 9
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2524_2526delGAG
  hgvsp: ENSP00000361120.3:p.Glu842del
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2437_2439delGAG
  hgvsp: ENSP00000361132.3:p.Glu813del
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3224_3226delGAG
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.133_135delGAG
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2359_2361delGAG
  hgvsp: ENSP00000376867.3:p.Glu787del
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.3003_3005delGAG
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2521_2523delGAG
  hgvsp: ENSP00000376864.3:p.Glu841del
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.233_235delGAG
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2488_2490delGAG
  hgvsp: ENSP00000361117.3:p.Glu830del
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2737_2739delGAG
  hgvsp: ENSP00000437518.1:p.Glu913del
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3514_3516delGAG
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.465_467delGAG
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5709
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2385
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6985
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6341
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6765
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu842del
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: GCTC
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

9-135975698-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975698
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975698
    reference: chr 9
allele count: 434
allele frequency: 3.574723247232472e-3
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2739G>A
  hgvsp: ENST00000542690.1:c.2739G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.3005G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2526G>A
  hgvsp: ENST00000372050.3:c.2526G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.135G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2439G>A
  hgvsp: ENST00000372062.3:c.2439G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3226G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.467G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2490G>A
  hgvsp: ENST00000372047.3:c.2490G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2361G>A
  hgvsp: ENST00000393160.3:c.2361G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2523G>A
  hgvsp: ENST00000393157.3:c.2523G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.235G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3516G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4540
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6755
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6337
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7598
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 9.75e1
  variant carriers: 387
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5704
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Glu842Glu
num of homozygotes: 8
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ

9-135975701-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975701
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975701
    reference: chr 9
allele count: 3
allele frequency: 2.471006852925672e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2436G>A
  hgvsp: ENST00000372062.3:c.2436G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3223G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2523G>A
  hgvsp: ENST00000372050.3:c.2523G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2487G>A
  hgvsp: ENST00000372047.3:c.2487G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2520G>A
  hgvsp: ENST00000393157.3:c.2520G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3513G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2736G>A
  hgvsp: ENST00000542690.1:c.2736G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2358G>A
  hgvsp: ENST00000393160.3:c.2358G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.464G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.3002G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.232G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.132G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4091
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu841Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

9-135975714-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975714
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975714
    reference: chr 9
allele count: 2
allele frequency: 1.647310765175851e-5
allele num: 121410
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2989A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.119A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2423A>G
  hgvsp: ENSP00000361132.3:p.Asn808Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2723A>G
  hgvsp: ENSP00000437518.1:p.Asn908Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2510A>G
  hgvsp: ENSP00000361120.3:p.Asn837Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3500A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2474A>G
  hgvsp: ENSP00000361117.3:p.Asn825Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.219A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2507A>G
  hgvsp: ENSP00000376864.3:p.Asn836Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3210A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2345A>G
  hgvsp: ENSP00000376867.3:p.Asn782Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.451A>G
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn837Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

9-135975722-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975722
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975722
    reference: chr 9
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2466C>G
  hgvsp: ENSP00000361117.3:p.Asp822Glu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2415C>G
  hgvsp: ENSP00000361132.3:p.Asp805Glu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2981C>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3202C>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.211C>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2499C>G
  hgvsp: ENSP00000376864.3:p.Asp833Glu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.111C>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2715C>G
  hgvsp: ENSP00000437518.1:p.Asp905Glu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2337C>G
  hgvsp: ENSP00000376867.3:p.Asp779Glu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2502C>G
  hgvsp: ENSP00000361120.3:p.Asp834Glu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3492C>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.443C>G
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp834Glu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

9-135975733-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975733
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975733
    reference: chr 9
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2326A>G
  hgvsp: ENSP00000376867.3:p.Lys776Glu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3191A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3481A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2704A>G
  hgvsp: ENSP00000437518.1:p.Lys902Glu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2455A>G
  hgvsp: ENSP00000361117.3:p.Lys819Glu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2491A>G
  hgvsp: ENSP00000361120.3:p.Lys831Glu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.100A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2488A>G
  hgvsp: ENSP00000376864.3:p.Lys830Glu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2404A>G
  hgvsp: ENSP00000361132.3:p.Lys802Glu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.432A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.200A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2970A>G
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6378
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Lys831Glu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum

9-135975734-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975734
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975734
    reference: chr 9
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2403C>A
  hgvsp: ENST00000372062.3:c.2403C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2454C>A
  hgvsp: ENST00000372047.3:c.2454C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2969C>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2325C>A
  hgvsp: ENST00000393160.3:c.2325C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.431C>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.199C>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2490C>A
  hgvsp: ENST00000372050.3:c.2490C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.99C>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2703C>A
  hgvsp: ENST00000542690.1:c.2703C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3480C>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2487C>A
  hgvsp: ENST00000393157.3:c.2487C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3190C>A
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4088
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg830Arg
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/9-135975735-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975735
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975735
    reference: chr 9
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2486G>T
  hgvsp: ENSP00000376864.3:p.Arg829Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.198G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3479G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2489G>T
  hgvsp: ENSP00000361120.3:p.Arg830Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.98G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2324G>T
  hgvsp: ENSP00000376867.3:p.Arg775Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2453G>T
  hgvsp: ENSP00000361117.3:p.Arg818Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2402G>T
  hgvsp: ENSP00000361132.3:p.Arg801Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2702G>T
  hgvsp: ENSP00000437518.1:p.Arg901Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3189G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2968G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.430G>T
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg830Leu
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff

9-135975735-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975735
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975735
    reference: chr 9
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3479G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.430G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2489G>A
  hgvsp: ENSP00000361120.3:p.Arg830His
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2968G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2702G>A
  hgvsp: ENSP00000437518.1:p.Arg901His
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2486G>A
  hgvsp: ENSP00000376864.3:p.Arg829His
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2402G>A
  hgvsp: ENSP00000361132.3:p.Arg801His
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3189G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2453G>A
  hgvsp: ENSP00000361117.3:p.Arg818His
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2324G>A
  hgvsp: ENSP00000376867.3:p.Arg775His
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.198G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.98G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg830His
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP

9-135975742-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975742
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975742
    reference: chr 9
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2695G>A
  hgvsp: ENSP00000437518.1:p.Val899Ile
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2446G>A
  hgvsp: ENSP00000361117.3:p.Val816Ile
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2395G>A
  hgvsp: ENSP00000361132.3:p.Val799Ile
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2961G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.191G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2317G>A
  hgvsp: ENSP00000376867.3:p.Val773Ile
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2479G>A
  hgvsp: ENSP00000376864.3:p.Val827Ile
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3182G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2482G>A
  hgvsp: ENSP00000361120.3:p.Val828Ile
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3472G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.423G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.91G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6374
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7571
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val828Ile
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum

http://identifiers.org/exac.variant/9-135975745-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975745
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975745
    reference: chr 9
allele count: 3
allele frequency: 2.471454698235381e-5
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.420G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2314G>T
  hgvsp: ENSP00000376867.3:p.Ala772Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2958G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2392G>T
  hgvsp: ENSP00000361132.3:p.Ala798Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2692G>T
  hgvsp: ENSP00000437518.1:p.Ala898Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.188G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2443G>T
  hgvsp: ENSP00000361117.3:p.Ala815Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3179G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3469G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2479G>T
  hgvsp: ENSP00000361120.3:p.Ala827Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.88G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2476G>T
  hgvsp: ENSP00000376864.3:p.Ala826Ser
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6374
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5727
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala827Ser
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

9-135975746-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975746
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975746
    reference: chr 9
allele count: 5
allele frequency: 4.119159032491926e-5
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2478G>A
  hgvsp: ENST00000372050.3:c.2478G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2475G>A
  hgvsp: ENST00000393157.3:c.2475G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2691G>A
  hgvsp: ENST00000542690.1:c.2691G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2442G>A
  hgvsp: ENST00000372047.3:c.2442G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.419G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2313G>A
  hgvsp: ENST00000393160.3:c.2313G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.187G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.87G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2391G>A
  hgvsp: ENST00000372062.3:c.2391G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2957G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3468G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3178G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro826Pro
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD

9-135975747-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975747
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975747
    reference: chr 9
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2477C>T
  hgvsp: ENSP00000361120.3:p.Pro826Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2441C>T
  hgvsp: ENSP00000361117.3:p.Pro814Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2956C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3177C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.86C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3467C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2690C>T
  hgvsp: ENSP00000437518.1:p.Pro897Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2474C>T
  hgvsp: ENSP00000376864.3:p.Pro825Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2312C>T
  hgvsp: ENSP00000376867.3:p.Pro771Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.418C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2390C>T
  hgvsp: ENSP00000361132.3:p.Pro797Leu
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.186C>T
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4575
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro826Leu
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/9-135975751-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975751
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975751
    reference: chr 9
allele count: 3
allele frequency: 2.471699045924168e-5
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3463G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.82G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2386G>T
  hgvsp: ENSP00000361132.3:p.Ala796Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2308G>T
  hgvsp: ENSP00000376867.3:p.Ala770Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2686G>T
  hgvsp: ENSP00000437518.1:p.Ala896Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2473G>T
  hgvsp: ENSP00000361120.3:p.Ala825Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2470G>T
  hgvsp: ENSP00000376864.3:p.Ala824Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2437G>T
  hgvsp: ENSP00000361117.3:p.Ala813Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.182G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2952G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3173G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.414G>T
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4074
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7573
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala825Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: DP

9-135975751-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975751
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975751
    reference: chr 9
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2308G>A
  hgvsp: ENSP00000376867.3:p.Ala770Thr
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.182G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2952G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2473G>A
  hgvsp: ENSP00000361120.3:p.Ala825Thr
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2386G>A
  hgvsp: ENSP00000361132.3:p.Ala796Thr
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.414G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3173G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2686G>A
  hgvsp: ENSP00000437518.1:p.Ala896Thr
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2437G>A
  hgvsp: ENSP00000361117.3:p.Ala813Thr
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3463G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2470G>A
  hgvsp: ENSP00000376864.3:p.Ala824Thr
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.82G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4074
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7573
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala825Thr
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

9-135975766-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975766
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975766
    reference: chr 9
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2671A>T
  hgvsp: ENSP00000437518.1:p.Thr891Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2422A>T
  hgvsp: ENSP00000361117.3:p.Thr808Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.167A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2458A>T
  hgvsp: ENSP00000361120.3:p.Thr820Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2293A>T
  hgvsp: ENSP00000376867.3:p.Thr765Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2455A>T
  hgvsp: ENSP00000376864.3:p.Thr819Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2371A>T
  hgvsp: ENSP00000361132.3:p.Thr791Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.67A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3158A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3448A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2937A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.399A>T
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3327
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7014
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr820Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

9-135975773-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975773
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975773
    reference: chr 9
allele count: 2
allele frequency: 1.648940555692967e-5
allele num: 121290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.160G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3151G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.64-4G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2368-4G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2419-4G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2452-4G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2668-4G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2290-4G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2930G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.396-4G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3445-4G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2455-4G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6997
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2455-4G>A
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

9-135975774-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975774
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975774
    reference: chr 9
allele count: 2
allele frequency: 1.648994937585542e-5
allele num: 121286
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3445-5T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.396-5T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2455-5T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2929T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.64-5T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2419-5T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3150T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2452-5T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2668-5T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2290-5T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2368-5T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.159T>C
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6996
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2455-5T>C
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum

9-135975776-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975776
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975776
    reference: chr 9
allele count: 9
allele frequency: 7.422068283028204e-5
allele num: 121260
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2668-7G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3148G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2368-7G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.157G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2419-7G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2452-7G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2927G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2290-7G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3445-7G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2455-7G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.396-7G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.64-7G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5730
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.2455-7G>A
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD

9-135975777-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975777
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975777
    reference: chr 9
allele count: 2
allele frequency: 1.649484536082474e-5
allele num: 121250
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2455-8C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.64-8C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3445-8C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2926C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2368-8C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.396-8C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2668-8C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3147C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2419-8C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2452-8C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2290-8C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.156C>T
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6986
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5730
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 869
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.2455-8C>T
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

9-135975778-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975778
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975778
    reference: chr 9
allele count: 2
allele frequency: 1.649375711293276e-5
allele num: 121258
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2455-9G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.64-9G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2925G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.396-9G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3445-9G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2290-9G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2368-9G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3146G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.155G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2668-9G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2452-9G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2419-9G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6986
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5731
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

9-135975779-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975779
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975779
    reference: chr 9
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2924C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2419-10C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2455-10C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.396-10C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2290-10C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.154C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2368-10C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.64-10C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2452-10C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3145C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3445-10C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2668-10C>T
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6267
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3331
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5731
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

9-135975781-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975781
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975781
    reference: chr 9
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3143G>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.64-12G>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.396-12G>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2290-12G>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2455-12G>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2368-12G>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2668-12G>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2922G>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2452-12G>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.152G>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3445-12G>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2419-12G>C
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5732
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

9-135975781-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975781
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975781
    reference: chr 9
allele count: 4
allele frequency: 3.299241174529858e-5
allele num: 121240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2452-12G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2419-12G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.64-12G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2368-12G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2922G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2668-12G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.396-12G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2455-12G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3143G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.152G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2290-12G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3445-12G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6263
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

9-135975782-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975782
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975782
    reference: chr 9
allele count: 2
allele frequency: 1.649620587264929e-5
allele num: 121240
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2368-13C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2668-13C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3142C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2921C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2455-13C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2452-13C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2290-13C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.64-13C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2419-13C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.151C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.396-13C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3445-13C>T
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5731
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

9-135975795-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975795
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975795
    reference: chr 9
allele count: 2
allele frequency: 1.650764303872693e-5
allele num: 121156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2290-26A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2419-26A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.396-26A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3129A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2908A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2452-26A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2368-26A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2455-26A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3445-26A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.138A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2668-26A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.64-26A>T
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4573
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7640
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7546
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5732
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3329
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

9-135975799-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975799
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975799
    reference: chr 9
allele count: 425
allele frequency: 3.509206506481711e-3
allele num: 121110
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2368-30C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2452-30C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2290-30C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3445-30C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.396-30C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.134C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2904C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2419-30C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2455-30C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3125C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2668-30C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.64-30C>T
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 6.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 7.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 4581
  bin: 6.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 6905
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 7.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 8.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6067
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 9.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 7539
  bin: 4.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 5.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 7642
  bin: 4.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 5.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 9.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
num of homozygotes: 6
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

9-135975800-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975800
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975800
    reference: chr 9
allele count: 1
allele frequency: 8.257774694875225e-6
allele num: 121098
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.396-31C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3124C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2452-31C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2668-31C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2903C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.64-31C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.133C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3445-31C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2368-31C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2455-31C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2290-31C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2419-31C>T
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6808
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5735
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2381
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7660
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

9-135975812-GAGCGGCTCCCCCAGAGTGC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975812
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975793
    reference: chr 9
allele count: 72
allele frequency: 5.958686440677966e-4
allele num: 120832
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7362
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5351
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6397
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5734
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7606
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3289
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6795
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3023
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: GAGCGGCTCCCCCAGAGTGC
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

9-135975815-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975815
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975815
    reference: chr 9
allele count: 3
allele frequency: 2.488222413907504e-5
allele num: 120568
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.64-46G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.118G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2419-46G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.396-46G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2290-46G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3445-46G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2452-46G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2888G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3109G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2668-46G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2455-46G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2368-46G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 4972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6782
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5724
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD

9-135975815-CGGCTCCCCCAGAGTGCAGTGGCCAAGGACCCTCTGGAGT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975815
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975776
    reference: chr 9
allele count: 1
allele frequency: 8.294074713025015e-6
allele num: 120568
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5724
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6273
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3182
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6782
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7589
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3466
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1391
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: CGGCTCCCCCAGAGTGCAGTGGCCAAGGACCCTCTGGAGT
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

9-135975816-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975816
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975816
    reference: chr 9
allele count: 3
allele frequency: 2.489998506000897e-5
allele num: 120482
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2887C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.396-47C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2290-47C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.117C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3445-47C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2455-47C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2668-47C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2419-47C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2368-47C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.64-47C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2452-47C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3108C>T
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6782
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7311
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7584
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5725
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4746
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

9-135975819-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135975819
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135975818
    reference: chr 9
allele count: 1
allele frequency: 8.305647840531562e-6
allele num: 120400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.3104delG
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.3445-51delG
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2452-51delG
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.64-51delG
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2290-51delG
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2368-51delG
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000495621
  gene symbol: RALGDS
  hgvsc: ENST00000495621.1:n.113delG
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2419-51delG
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.396-51delG
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2883delG
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2455-51delG
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2668-51delG
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6781
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6132
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5724
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7301
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7585
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: TC
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

9-135976638-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976638
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976638
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 1826
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+269T>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+269T>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2689T>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+269T>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+269T>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+269T>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2286T>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+269T>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+269T>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2065T>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+269T>A
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8400
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38840
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum

http://identifiers.org/exac.variant/9-135976654-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976654
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976654
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 1992
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2049G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+253G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+253G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2673G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+253G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+253G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2270G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+253G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+253G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+253G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+253G>T
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 38548
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9646
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

9-135976657-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976657
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976657
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 2104
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+250C>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+250C>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2670C>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+250C>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+250C>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+250C>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2046C>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2267C>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+250C>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+250C>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+250C>G
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38447
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum

9-135976664-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976664
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976664
    reference: chr 9
allele count: 1922
allele frequency: 4.191016136066289e-1
allele num: 4586
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+243G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+243G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2663G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2039G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+243G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2260G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+243G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+243G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+243G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+243G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+243G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 255
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15890
  bin: 7.5e0
  variant carriers: 6688
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 29605
  bin: 2.5e0
  variant carriers: 2945
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 1.25e1
  variant carriers: 1341
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 2.75e1
  variant carriers: 837
num of homozygotes: 270
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/9-135976670-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976670
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976670
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 4700
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2657G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+237G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+237G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2254G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+237G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+237G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+237G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+237G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2033G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+237G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+237G>T
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16789
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33309
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5143
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/9-135976679-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976679
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976679
    reference: chr 9
allele count: 3246
allele frequency: 3.57488986784141e-1
allele num: 9080
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+228G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+228G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+228G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+228G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2245G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+228G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+228G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2024G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+228G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2648G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+228G>T
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22300
  bin: 7.5e0
  variant carriers: 7355
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 2.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 1.75e1
  variant carriers: 439
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24972
  bin: 2.5e0
  variant carriers: 2304
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 1.25e1
  variant carriers: 2327
genotype quality: GenotypeQuality
  all individuals: 18827
  bin: 7.5e0
  variant carriers: 943
num of homozygotes: 398
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
reference allele: C
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

9-135976679-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976679
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976679
    reference: chr 9
allele count: 1
allele frequency: 1.101321585903084e-4
allele num: 9080
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2245G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+228G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+228G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2024G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+228G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+228G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+228G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+228G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2648G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+228G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+228G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24972
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9785
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD

9-135976680-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976680
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976680
    reference: chr 9
allele count: 1
allele frequency: 1.04887770086008e-4
allele num: 9534
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+227C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+227C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+227C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+227C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+227C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+227C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+227C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2244C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2647C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2023C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+227C>T
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27035
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22946
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1541
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/9-135976690-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976690
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976690
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 10834
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+217G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+217G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+217G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2234G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+217G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+217G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+217G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+217G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2013G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2637G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+217G>T
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26964
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24060
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 4.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

9-135976691-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976691
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976691
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 11182
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+216A>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+216A>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+216A>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+216A>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2636A>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+216A>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+216A>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2012A>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+216A>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2233A>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+216A>C
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4542
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23650
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27422
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/9-135976693-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976693
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976693
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 11648
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+214G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+214G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2010G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+214G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2634G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+214G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+214G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2231G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+214G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+214G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+214G>T
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22696
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3607
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

9-135976694-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976694
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976694
    reference: chr 9
allele count: 1
allele frequency: 8.500510030601836e-5
allele num: 11764
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+213A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+213A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+213A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+213A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2009A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+213A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+213A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2633A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2230A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+213A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+213A>G
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22091
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4684
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28996
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

9-135976698-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976698
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976698
    reference: chr 9
allele count: 8853
allele frequency: 3.814632885211996e-1
allele num: 23208
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2629C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2226C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+209C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+209C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+209C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+209C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.2005C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+209C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+209C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+209C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+209C>T
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 1.75e1
  variant carriers: 1687
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 3.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 8944
  bin: 1.25e1
  variant carriers: 5496
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 2.25e1
  variant carriers: 445
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15885
  bin: 2.5e0
  variant carriers: 1320
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 2.75e1
  variant carriers: 134
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28191
  bin: 7.5e0
  variant carriers: 8088
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2423
  bin: 1.25e1
  variant carriers: 537
num of homozygotes: 1138
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

9-135976707-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976707
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976707
    reference: chr 9
allele count: 1
allele frequency: 3.760529482551143e-5
allele num: 26592
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+200G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+200G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+200G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2620G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2217G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+200G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+200G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+200G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.1996G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+200G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+200G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30385
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13974
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2836
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD

9-135976708-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976708
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976708
    reference: chr 9
allele count: 2
allele frequency: 7.273785277858598e-5
allele num: 27496
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+199C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2216C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+199C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.1995C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+199C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2619C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+199C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+199C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+199C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+199C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+199C>T
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30920
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9715
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13286
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27171
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

9-135976710-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976710
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976710
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 28968
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+197G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.1993G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+197G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+197G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2617G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+197G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+197G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2214G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+197G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+197G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+197G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31226
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9874
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12509
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

9-135976711-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976711
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976711
    reference: chr 9
allele count: 1
allele frequency: 3.354804079441761e-5
allele num: 29808
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+196A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+196A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+196A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+196A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+196A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.1992A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2616A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+196A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+196A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+196A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2213A>G
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11864
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31714
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9782
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2022
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ

9-135976716-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976716
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976716
    reference: chr 9
allele count: 20
allele frequency: 6.037189084762135e-4
allele num: 33128
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+191G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+191G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2611G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.1987G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+191G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2208G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+191G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+191G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+191G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+191G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+191G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32364
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4958
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9702
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1915
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9766
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3981
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP

9-135976720-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976720
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976720
    reference: chr 9
allele count: 3
allele frequency: 8.361670104242154e-5
allele num: 35878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+187G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.1983G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+187G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+187G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+187G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2204G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+187G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2607G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+187G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+187G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+187G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9376
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32456
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6676
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3795
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

9-135976721-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976721
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976721
    reference: chr 9
allele count: 2
allele frequency: 5.389673385792821e-5
allele num: 37108
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+186G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+186G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+186G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+186G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2606G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.1982G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+186G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+186G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+186G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+186G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2203G>A
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8057
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7181
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9303
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7654
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

9-135976722-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976722
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976722
    reference: chr 9
allele count: 1
allele frequency: 2.632964718272775e-5
allele num: 37980
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+185A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+185A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2605A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2202A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.1981A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+185A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+185A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+185A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+185A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+185A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+185A>T
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2004
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31988
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7756
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7698
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9180
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/9-135976726-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 135976726
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 135976726
    reference: chr 9
allele count: 5
allele frequency: 1.169590643274854e-4
allele num: 42750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361117
  ensembl transcript: ENST00000372047
  gene symbol: RALGDS
  hgvsc: ENST00000372047.3:c.2418+181G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000477660
  gene symbol: RALGDS
  hgvsc: ENST00000477660.1:n.63+181G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000482648
  gene symbol: RALGDS
  hgvsc: ENST00000482648.1:n.1977G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361132
  ensembl transcript: ENST00000372062
  gene symbol: RALGDS
  hgvsc: ENST00000372062.3:c.2367+181G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000493438
  gene symbol: RALGDS
  hgvsc: ENST00000493438.1:n.2601G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.2667+181G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376864
  ensembl transcript: ENST00000393157
  gene symbol: RALGDS
  hgvsc: ENST00000393157.3:c.2451+181G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000361120
  ensembl transcript: ENST00000372050
  gene symbol: RALGDS
  hgvsc: ENST00000372050.3:c.2454+181G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000376867
  ensembl transcript: ENST00000393160
  gene symbol: RALGDS
  hgvsc: ENST00000393160.3:c.2289+181G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000469972
  gene symbol: RALGDS
  hgvsc: ENST00000469972.1:n.2198G>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl transcript: ENST00000498797
  gene symbol: RALGDS
  hgvsc: ENST00000498797.1:n.395+181G>T
  variant of: http://identifiers.org/hgnc/9842
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6691
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8836
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31036
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

GenotypeDepth
all individuals: 625
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1286
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 7521
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1001
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4543
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1880
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3034
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2750
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1527
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3160
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38228
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6668
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3448
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.144e1

FS
type: SiteQuality
SIO_000300: 1.8e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.05e0

MQRankSum
type: SiteQuality
SIO_000300: 6.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.918e1

DP
type: SiteQuality
SIO_000300: 3.064067e6

VQSLOD
type: SiteQuality
SIO_000300: 6.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-1

GenotypeDepth
all individuals: 1002
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5699
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1882
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3034
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38227
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3448
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2750
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6666
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1527
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

FS
type: SiteQuality
SIO_000300: 5.47e-1

QD
type: SiteQuality
SIO_000300: 1.249e1

VQSLOD
type: SiteQuality
SIO_000300: 2.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.63e-1

DP
type: SiteQuality
SIO_000300: 3.079856e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

GenotypeDepth
all individuals: 4542
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 625
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1882
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3448
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1527
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6666
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38227
bin: 9.75e1
variant carriers: 91

GenotypeQuality
all individuals: 2750
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3034
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 88
allele frequency: 1.318589109652672e-3
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.535833081342606e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 1.249e1

FS
type: SiteQuality
SIO_000300: 5.47e-1

DP
type: SiteQuality
SIO_000300: 3.079856e6

VQSLOD
type: SiteQuality
SIO_000300: 2.01e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: 5.6e-2

GenotypeDepth
all individuals: 625
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2386
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1884
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6679
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3451
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3165
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3038
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38198
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1529
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2752
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

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African
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European (Finnish)
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MQRankSum
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InbreedingCoeff
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DP
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MQ
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BaseQRankSum
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FS
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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Latino
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European (Non-Finnish)
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MQRankSum
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VQSLOD
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FS
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MQ
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QD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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European (Non-Finnish)
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South Asian
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FS
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DP
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MQ
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MQRankSum
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQ
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MQRankSum
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VQSLOD
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DP
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QD
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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ReadPosRankSum
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InbreedingCoeff
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QD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Non-Finnish)
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MQ
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FS
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VQSLOD
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QD
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ReadPosRankSum
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East Asian
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FS
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European (Non-Finnish)
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African
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South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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SIO_000300: 1.76e0

MQRankSum
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BaseQRankSum
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MQ
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SIO_000300: 5.975e1

ReadPosRankSum
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SIO_000300: 1.1e0

InbreedingCoeff
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SIO_000300: 0.0e0

DP
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SIO_000300: 3.053198e6

FS
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SIO_000300: 5.16e-1

ClippingRankSum
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SIO_000300: -6.11e-1

QD
type: SiteQuality
SIO_000300: 1.29e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

African
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num of homozygotes: 0

Other
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num of homozygotes: 0

DP
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SIO_000300: 3.05292e6

QD
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MQ
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -9.6e-1

MQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 5.22e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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DP
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SIO_000300: 3.05263e6

ClippingRankSum
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FS
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SIO_000300: 0.0e0

VQSLOD
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: -1.542e0

InbreedingCoeff
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SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

QD
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SIO_000300: 1.616e1

GenotypeDepth
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variant carriers: 4

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 426

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 288
allele frequency: 2.767634057274649e-2
allele num: 10406
num of homozygotes: 6

European (Non-Finnish)
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allele count: 84
allele frequency: 1.258690961400144e-3
allele num: 66736
num of homozygotes: 2

Other
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allele frequency: 6.607929515418502e-3
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num of homozygotes: 0

East Asian
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allele frequency: 3.466605038132656e-4
allele num: 8654
num of homozygotes: 0

South Asian
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allele frequency: 1.090116279069767e-3
allele num: 16512
num of homozygotes: 0

Latino
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allele frequency: 3.022974607013301e-3
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
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ReadPosRankSum
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DP
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VQSLOD
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ClippingRankSum
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MQRankSum
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QD
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FS
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SIO_000300: 1.751e0

BaseQRankSum
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SIO_000300: -4.328e0

MQ
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SIO_000300: 5.966e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.495324862143371e-5
allele num: 66736
num of homozygotes: 0

East Asian
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European (Finnish)
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African
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Latino
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South Asian
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Other
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FS
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SIO_000300: 1.108e0

VQSLOD
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MQRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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QD
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ClippingRankSum
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InbreedingCoeff
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DP
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.4983967155144e-5
allele num: 66738
num of homozygotes: 0

African
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South Asian
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Latino
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European (Finnish)
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Other
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East Asian
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InbreedingCoeff
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BaseQRankSum
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FS
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ClippingRankSum
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QD
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VQSLOD
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MQ
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MQRankSum
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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African
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European (Finnish)
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Other
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South Asian
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VQSLOD
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MQ
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FS
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DP
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QD
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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Other
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South Asian
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African
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European (Non-Finnish)
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East Asian
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQ
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VQSLOD
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FS
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DP
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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East Asian
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Latino
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South Asian
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European (Finnish)
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European (Non-Finnish)
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MQRankSum
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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QD
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FS
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MQ
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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East Asian
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Other
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ReadPosRankSum
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QD
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ClippingRankSum
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MQRankSum
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FS
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VQSLOD
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DP
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BaseQRankSum
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MQ
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

African
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Other
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Latino
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European (Non-Finnish)
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European (Finnish)
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South Asian
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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QD
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MQ
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MQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Finnish)
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Latino
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South Asian
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Other
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African
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European (Non-Finnish)
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InbreedingCoeff
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ReadPosRankSum
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QD
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ClippingRankSum
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DP
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MQRankSum
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MQ
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VQSLOD
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FS
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Finnish)
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Latino
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European (Non-Finnish)
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South Asian
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Other
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FS
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ReadPosRankSum
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InbreedingCoeff
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QD
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MQ
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MQRankSum
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VQSLOD
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Non-Finnish)
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East Asian
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Latino
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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FS
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VQSLOD
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MQRankSum
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MQ
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BaseQRankSum
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DP
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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European (Finnish)
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African
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 2.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.64e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.893e1

DP
type: SiteQuality
SIO_000300: 3.015954e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.52e-1

VQSLOD
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SIO_000300: 3.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

QD
type: SiteQuality
SIO_000300: 1.389e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 3328
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998231043684226e-5
allele num: 66706
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.54e-1

InbreedingCoeff
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SIO_000300: 2.2e-3

FS
type: SiteQuality
SIO_000300: 3.655e0

MQRankSum
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SIO_000300: -3.2e-2

VQSLOD
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ReadPosRankSum
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SIO_000300: 5.8e-2

MQ
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SIO_000300: 5.963e1

QD
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SIO_000300: 1.257e1

BaseQRankSum
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SIO_000300: -1.473e0

DP
type: SiteQuality
SIO_000300: 3.015651e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.257e1

FS
type: SiteQuality
SIO_000300: 3.655e0

MQRankSum
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SIO_000300: -3.2e-2

ReadPosRankSum
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InbreedingCoeff
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SIO_000300: 2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.54e-1

BaseQRankSum
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SIO_000300: -1.473e0

VQSLOD
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SIO_000300: 1.96e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

DP
type: SiteQuality
SIO_000300: 3.015651e6

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66686
num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.985e1

DP
type: SiteQuality
SIO_000300: 3.014206e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e-1

FS
type: SiteQuality
SIO_000300: 1.0069e1

InbreedingCoeff
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SIO_000300: 5.999999999999999e-4

VQSLOD
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SIO_000300: -1.517e0

MQRankSum
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SIO_000300: -1.712e0

BaseQRankSum
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SIO_000300: -4.067e0

QD
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SIO_000300: 1.588e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.24e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500375093773443e-5
allele num: 66650
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.907e0

MQ
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MQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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DP
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QD
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VQSLOD
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ClippingRankSum
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SIO_000300: 1.84e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.926411096127914e-4
allele num: 10382
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

South Asian
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BaseQRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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DP
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ReadPosRankSum
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FS
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ClippingRankSum
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QD
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MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
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allele num: 11574
num of homozygotes: 0

African
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allele frequency: 9.633911368015414e-5
allele num: 10380
num of homozygotes: 0

South Asian
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allele num: 16512
num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

East Asian
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allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.50480307396734e-5
allele num: 66624
num of homozygotes: 0

Other
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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MQ
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MQRankSum
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ClippingRankSum
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DP
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FS
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
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num of homozygotes: 0

Other
type: Population
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South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501095799933952e-5
allele num: 66618
num of homozygotes: 0

East Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.59e0

QD
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SIO_000300: 1.523e1

InbreedingCoeff
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SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.05e-1

ReadPosRankSum
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SIO_000300: 1.1e0

FS
type: SiteQuality
SIO_000300: 3.948e0

MQ
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SIO_000300: 5.971e1

BaseQRankSum
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SIO_000300: -6.595e0

DP
type: SiteQuality
SIO_000300: 3.010358e6

VQSLOD
type: SiteQuality
SIO_000300: 1.87e-1

GenotypeDepth
all individuals: 867
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 26
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500960614793468e-5
allele num: 66624
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: 4.66e0

VQSLOD
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FS
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MQ
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InbreedingCoeff
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DP
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SIO_000300: 3.009898e6

MQRankSum
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SIO_000300: 1.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e-1

QD
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SIO_000300: 1.419e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66614
num of homozygotes: 0

East Asian
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allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.93e-1

DP
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FS
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SIO_000300: 1.031e0

QD
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: -2.0e-4

MQ
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SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.25e-1

VQSLOD
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SIO_000300: 3.12e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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QD
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SIO_000300: 1.438e1

BaseQRankSum
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SIO_000300: 6.02e0

InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
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SIO_000300: 5.977e1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.008563e6

FS
type: SiteQuality
SIO_000300: 1.157e0

VQSLOD
type: SiteQuality
SIO_000300: 5.570000000000001e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

South Asian
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allele frequency: 1.816860465116279e-4
allele num: 16512
num of homozygotes: 0

East Asian
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

FS
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SIO_000300: 1.157e0

ClippingRankSum
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DP
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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MQ
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ReadPosRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.002552169343942e-5
allele num: 66610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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num of homozygotes: 0

South Asian
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East Asian
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BaseQRankSum
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DP
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InbreedingCoeff
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QD
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FS
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ReadPosRankSum
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MQ
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MQRankSum
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 24
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66548
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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Latino
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QD
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ReadPosRankSum
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FS
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InbreedingCoeff
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MQ
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BaseQRankSum
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VQSLOD
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DP
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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variant carriers: 20

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 419

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2984
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.202790473899447e-4
allele num: 66512
num of homozygotes: 0

African
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allele count: 392
allele frequency: 3.785245268443414e-2
allele num: 10356
num of homozygotes: 6

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 21
allele frequency: 1.815666609026457e-3
allele num: 11566
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East Asian
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Other
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allele frequency: 2.202643171806168e-3
allele num: 908
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European (Finnish)
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ClippingRankSum
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DP
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FS
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MQRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: 4.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.15e-2

QD
type: SiteQuality
SIO_000300: 1.537e1

GenotypeDepth
all individuals: 6117
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variant carriers: 0

GenotypeQuality
all individuals: 124
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66506
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.271e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

QD
type: SiteQuality
SIO_000300: 1.143e1

MQRankSum
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DP
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ClippingRankSum
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VQSLOD
type: SiteQuality
SIO_000300: 1.11e-1

InbreedingCoeff
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SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.534e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele frequency: 1.297129021099965e-3
allele num: 11564
num of homozygotes: 0

African
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allele count: 48
allele frequency: 4.659289458357601e-3
allele num: 10302
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
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allele count: 9
allele frequency: 1.357343226857298e-4
allele num: 66306
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: 9.54e-1

ReadPosRankSum
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FS
type: SiteQuality
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QD
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.34e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.64e0

DP
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SIO_000300: 2.950672e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.825112988799372e-5
allele num: 10178
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.020782986950218e-5
allele num: 66208
num of homozygotes: 0

East Asian
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allele count: 0
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num of homozygotes: 0

Other
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allele count: 0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ClippingRankSum
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SIO_000300: -3.34e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 3.341e0

MQRankSum
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SIO_000300: -1.26e-1

DP
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 9.53e-1

QD
type: SiteQuality
SIO_000300: 4.75e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66208
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 1
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allele num: 904
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

QD
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
type: SiteQuality
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FS
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SIO_000300: 3.341e0

ClippingRankSum
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SIO_000300: -3.34e-1

GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10170
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.023705853894533e-5
allele num: 66144
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
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DP
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.492e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66090
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
allele num: 8604
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South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.053e1

ReadPosRankSum
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DP
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VQSLOD
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MQRankSum
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ClippingRankSum
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FS
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MQ
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 376
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 106
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 964
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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QD
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BaseQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1018
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

QD
type: SiteQuality
SIO_000300: 6.92e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.04e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.768e-1

DP
type: SiteQuality
SIO_000300: 1.73443e5

GenotypeQuality
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6465
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4097
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1076
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 68
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.436e1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.69e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.80044e5

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

GenotypeQuality
all individuals: 526
bin: 3.25e1
variant carriers: 332

GenotypeQuality
all individuals: 147
bin: 4.75e1
variant carriers: 138

GenotypeQuality
all individuals: 259
bin: 5.25e1
variant carriers: 252

GenotypeQuality
all individuals: 9677
bin: 2.5e0
variant carriers: 24

GenotypeQuality
all individuals: 2735
bin: 1.25e1
variant carriers: 940

GenotypeQuality
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bin: 7.5e0
variant carriers: 1274

GenotypeQuality
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bin: 3.75e1
variant carriers: 89

GenotypeQuality
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bin: 6.75e1
variant carriers: 338

GenotypeQuality
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bin: 4.25e1
variant carriers: 48

GenotypeQuality
all individuals: 5288
bin: 2.25e1
variant carriers: 901

GenotypeQuality
all individuals: 2106
bin: 9.75e1
variant carriers: 2106

GenotypeQuality
all individuals: 448
bin: 5.75e1
variant carriers: 448

GenotypeQuality
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bin: 7.75e1
variant carriers: 194

GenotypeQuality
all individuals: 2194
bin: 1.75e1
variant carriers: 1216

GenotypeQuality
all individuals: 606
bin: 8.75e1
variant carriers: 605

GenotypeQuality
all individuals: 539
bin: 9.25e1
variant carriers: 539

GenotypeQuality
all individuals: 367
bin: 8.25e1
variant carriers: 367

GenotypeQuality
all individuals: 159
bin: 7.25e1
variant carriers: 156

GenotypeQuality
all individuals: 550
bin: 6.25e1
variant carriers: 502

European (Non-Finnish)
type: Population
allele count: 1022
allele frequency: 4.261884904086739e-1
allele num: 2398
num of homozygotes: 150

African
type: Population
allele count: 121
allele frequency: 3.218085106382979e-1
allele num: 376
num of homozygotes: 5

Latino
type: Population
allele count: 96
allele frequency: 4.137931034482759e-1
allele num: 232
num of homozygotes: 10

East Asian
type: Population
allele count: 100
allele frequency: 4.0e-1
allele num: 250
num of homozygotes: 17

South Asian
type: Population
allele count: 508
allele frequency: 4.463971880492091e-1
allele num: 1138
num of homozygotes: 77

Other
type: Population
allele count: 22
allele frequency: 4.4e-1
allele num: 50
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 53
allele frequency: 3.732394366197183e-1
allele num: 142
num of homozygotes: 7

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 2.2346e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.415e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.87e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.073e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.982e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
all individuals: 11
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
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variant carriers: 0

GenotypeQuality
all individuals: 9964
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variant carriers: 2

GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 28913
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GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 1988
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variant carriers: 0

GenotypeQuality
all individuals: 4173
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 899
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variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 238
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 160
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1138
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.94e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.02e-1

DP
type: SiteQuality
SIO_000300: 2.32651e5

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

QD
type: SiteQuality
SIO_000300: 7.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

GenotypeQuality
all individuals: 226
bin: 4.75e1
variant carriers: 173

GenotypeQuality
all individuals: 610
bin: 8.75e1
variant carriers: 609

GenotypeQuality
all individuals: 3352
bin: 9.75e1
variant carriers: 3346

GenotypeQuality
all individuals: 361
bin: 5.25e1
variant carriers: 342

GenotypeQuality
all individuals: 601
bin: 6.25e1
variant carriers: 483

GenotypeQuality
all individuals: 3096
bin: 1.75e1
variant carriers: 1187

GenotypeQuality
all individuals: 939
bin: 3.25e1
variant carriers: 393

GenotypeQuality
all individuals: 6803
bin: 2.5e0
variant carriers: 35

GenotypeQuality
all individuals: 491
bin: 5.75e1
variant carriers: 485

GenotypeQuality
all individuals: 155
bin: 4.25e1
variant carriers: 97

GenotypeQuality
all individuals: 9785
bin: 2.25e1
variant carriers: 1086

GenotypeQuality
all individuals: 1293
bin: 2.75e1
variant carriers: 665

GenotypeQuality
all individuals: 3526
bin: 1.25e1
variant carriers: 857

GenotypeQuality
all individuals: 369
bin: 3.75e1
variant carriers: 151

GenotypeQuality
all individuals: 173
bin: 7.75e1
variant carriers: 170

GenotypeQuality
all individuals: 361
bin: 8.25e1
variant carriers: 358

GenotypeQuality
all individuals: 344
bin: 6.75e1
variant carriers: 329

GenotypeQuality
all individuals: 183
bin: 7.25e1
variant carriers: 179

GenotypeQuality
all individuals: 662
bin: 9.25e1
variant carriers: 662

European (Finnish)
type: Population
allele count: 148
allele frequency: 3.794871794871795e-1
allele num: 390
num of homozygotes: 16

Other
type: Population
allele count: 29
allele frequency: 3.815789473684211e-1
allele num: 76
num of homozygotes: 3

East Asian
type: Population
allele count: 299
allele frequency: 4.853896103896104e-1
allele num: 616
num of homozygotes: 56

European (Non-Finnish)
type: Population
allele count: 1603
allele frequency: 3.462203023758099e-1
allele num: 4630
num of homozygotes: 172

Latino
type: Population
allele count: 207
allele frequency: 4.156626506024096e-1
allele num: 498
num of homozygotes: 30

South Asian
type: Population
allele count: 820
allele frequency: 3.602811950790861e-1
allele num: 2276
num of homozygotes: 110

African
type: Population
allele count: 140
allele frequency: 2.356902356902357e-1
allele num: 594
num of homozygotes: 11

QD
type: SiteQuality
SIO_000300: 1.931e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.367e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.74e-1

DP
type: SiteQuality
SIO_000300: 2.90503e5

VQSLOD
type: SiteQuality
SIO_000300: 9.56e0

GenotypeQuality
all individuals: 610
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6803
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 601
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variant carriers: 0

GenotypeQuality
all individuals: 18827
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
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GenotypeQuality
all individuals: 369
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variant carriers: 0

GenotypeQuality
all individuals: 1293
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3096
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3352
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3526
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
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variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.159827213822894e-4
allele num: 4630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 76
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2276
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.367e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

DP
type: SiteQuality
SIO_000300: 2.90503e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.931e1

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
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GenotypeQuality
all individuals: 13694
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GenotypeQuality
all individuals: 5427
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variant carriers: 0

GenotypeQuality
all individuals: 39
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GenotypeQuality
all individuals: 12
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GenotypeQuality
all individuals: 23218
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GenotypeQuality
all individuals: 1700
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GenotypeQuality
all individuals: 695
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GenotypeQuality
all individuals: 1657
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GenotypeQuality
all individuals: 199
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GenotypeQuality
all individuals: 6245
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 13
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variant carriers: 2

GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 181
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 426
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 84
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.054231717337716e-4
allele num: 4868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.95162e5

VQSLOD
type: SiteQuality
SIO_000300: -1.952e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.59e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.32e0

GenotypeQuality
all individuals: 7
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1789
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 49
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GenotypeQuality
all individuals: 59
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GenotypeQuality
all individuals: 732
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GenotypeQuality
all individuals: 443
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GenotypeQuality
all individuals: 1490
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GenotypeQuality
all individuals: 21250
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GenotypeQuality
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GenotypeQuality
all individuals: 26
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GenotypeQuality
all individuals: 1858
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GenotypeQuality
all individuals: 20578
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 3940
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 100
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2666
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.32093e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.38e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.04e-1

QD
type: SiteQuality
SIO_000300: 5.13e0

GenotypeQuality
all individuals: 7
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5696
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.27e-2

QD
type: SiteQuality
SIO_000300: 2.634e1

VQSLOD
type: SiteQuality
SIO_000300: -1.97e0

MQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.36172e5

GenotypeQuality
all individuals: 17
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 6.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 1

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 98
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.08e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.45312e5

QD
type: SiteQuality
SIO_000300: 1.026e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.48e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.955e-1

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 9
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2926
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.138952164009112e-3
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 102
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

DP
type: SiteQuality
SIO_000300: 3.50503e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.13e0

MQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.47e-1

QD
type: SiteQuality
SIO_000300: 1.469e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.04e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

GenotypeQuality
all individuals: 5751
bin: 2.5e0
variant carriers: 60

GenotypeQuality
all individuals: 821
bin: 8.75e1
variant carriers: 820

GenotypeQuality
all individuals: 15027
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variant carriers: 980

GenotypeQuality
all individuals: 373
bin: 6.75e1
variant carriers: 338

GenotypeQuality
all individuals: 871
bin: 6.25e1
variant carriers: 472

GenotypeQuality
all individuals: 7376
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variant carriers: 7373

GenotypeQuality
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bin: 1.75e1
variant carriers: 925

GenotypeQuality
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variant carriers: 352

GenotypeQuality
all individuals: 12061
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GenotypeQuality
all individuals: 1888
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variant carriers: 705

GenotypeQuality
all individuals: 303
bin: 4.25e1
variant carriers: 181

GenotypeQuality
all individuals: 494
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variant carriers: 366

GenotypeQuality
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bin: 3.25e1
variant carriers: 623

GenotypeQuality
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variant carriers: 450

GenotypeQuality
all individuals: 737
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variant carriers: 737

GenotypeQuality
all individuals: 586
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variant carriers: 581

GenotypeQuality
all individuals: 384
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variant carriers: 378

GenotypeQuality
all individuals: 868
bin: 3.75e1
variant carriers: 364

GenotypeQuality
all individuals: 587
bin: 5.75e1
variant carriers: 525

South Asian
type: Population
allele count: 2090
allele frequency: 3.902165795369679e-1
allele num: 5356
num of homozygotes: 321

African
type: Population
allele count: 379
allele frequency: 2.68033946251768e-1
allele num: 1414
num of homozygotes: 25

European (Finnish)
type: Population
allele count: 336
allele frequency: 3.380281690140845e-1
allele num: 994
num of homozygotes: 28

Latino
type: Population
allele count: 470
allele frequency: 3.778135048231511e-1
allele num: 1244
num of homozygotes: 41

East Asian
type: Population
allele count: 435
allele frequency: 3.143063583815029e-1
allele num: 1384
num of homozygotes: 44

European (Non-Finnish)
type: Population
allele count: 5068
allele frequency: 4.013939489941391e-1
allele num: 12626
num of homozygotes: 668

Other
type: Population
allele count: 75
allele frequency: 3.947368421052632e-1
allele num: 190
num of homozygotes: 11

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.63e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

DP
type: SiteQuality
SIO_000300: 4.16683e5

VQSLOD
type: SiteQuality
SIO_000300: 6.0e0

QD
type: SiteQuality
SIO_000300: 1.807e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.159e0

GenotypeQuality
all individuals: 29
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 3483
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variant carriers: 0

GenotypeQuality
all individuals: 1323
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 251
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GenotypeQuality
all individuals: 1796
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variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.910850034554251e-5
allele num: 14470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1170
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5954
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

DP
type: SiteQuality
SIO_000300: 4.60383e5

FS
type: SiteQuality
SIO_000300: 6.785e0

QD
type: SiteQuality
SIO_000300: 1.378e1

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 181
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GenotypeQuality
all individuals: 229
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1572
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.896226415094339e-4
allele num: 1696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6160
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1714
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.70331143584931e-5
allele num: 14918
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

QD
type: SiteQuality
SIO_000300: 1.162e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.83e-2

ClippingRankSum
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SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 5.813e1

DP
type: SiteQuality
SIO_000300: 4.70997e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 40
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2465
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GenotypeQuality
all individuals: 634
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1698
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15724
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1804
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1286
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 5.26e0

VQSLOD
type: SiteQuality
SIO_000300: -1.82e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.61e-2

FS
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 4.84424e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 79
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GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 229
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GenotypeQuality
all individuals: 12
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GenotypeQuality
all individuals: 224
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GenotypeQuality
all individuals: 10815
bin: 7.5e0
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1762
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 6.206554121151936e-5
allele num: 16112
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.46e-2

MQRankSum
type: SiteQuality
SIO_000300: -8.44e-1

QD
type: SiteQuality
SIO_000300: 1.052e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.77e-2

DP
type: SiteQuality
SIO_000300: 4.9425e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.288e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1441
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1923
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 543
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4658
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 56
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 16
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30441
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9071
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 836
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3652
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 7
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 1.469147894221352e-3
allele num: 2042
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.778549597110308e-4
allele num: 7198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1500
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.677268475210477e-4
allele num: 2138
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 3.846153846153846e-3
allele num: 260
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 7.273948075201432e-4
allele num: 17872
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.08e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

QD
type: SiteQuality
SIO_000300: 1.401e1

DP
type: SiteQuality
SIO_000300: 5.34756e5

GenotypeQuality
all individuals: 1140
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1806
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3552
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 274
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30906
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6310
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7921
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 157
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 4.25e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2258
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.552312946289972e-4
allele num: 19326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.342e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.668e0

VQSLOD
type: SiteQuality
SIO_000300: 7.08e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.99e-2

DP
type: SiteQuality
SIO_000300: 5.67264e5

QD
type: SiteQuality
SIO_000300: 1.111e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

GenotypeQuality
all individuals: 3797
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1143
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1806
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1036
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 402
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3561
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6825
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30871
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19934
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 8.058017727639e-4
allele num: 2482
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.536e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.017e0

MQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

DP
type: SiteQuality
SIO_000300: 5.76969e5

MQ
type: SiteQuality
SIO_000300: 5.901e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.839e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.82e-2

GenotypeQuality
all individuals: 1758
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 985
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7336
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30680
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 899
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3536
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3724
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7343
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1104
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1746
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.898599000685804e-5
allele num: 20414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7950
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.257e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.15e0

VQSLOD
type: SiteQuality
SIO_000300: -9.899e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.94e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 5.867e1

DP
type: SiteQuality
SIO_000300: 5.89432e5

GenotypeQuality
all individuals: 3338
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1056
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1806
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9127
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30009
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3584
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6351
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 11
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.461005999077065e-4
allele num: 8668
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 8.685079034219212e-5
allele num: 23028
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2940
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2000
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2884
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

QD
type: SiteQuality
SIO_000300: 1.26e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.17e-1

DP
type: SiteQuality
SIO_000300: 6.29856e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.37e0