9-86585717-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585717
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585717
    reference: chr 9
allele count: 5
allele frequency: 4.12847824291966e-5
allele num: 121110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.56G>A
  hgvsp: ENSP00000473957.1:p.Gly20Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1126G>A
  hgvsp: ENSP00000353552.5:p.Gly376Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1126G>A
  hgvsp: ENSP00000365440.2:p.Gly376Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1126G>A
  hgvsp: ENSP00000317788.4:p.Gly376Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1126G>A
  hgvsp: ENSP00000365458.4:p.Gly376Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1054G>A
  hgvsp: ENSP00000409456.1:p.Gly352Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1126G>A
  hgvsp: ENSP00000365439.3:p.Gly376Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.268G>A
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23345
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4906
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3509
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gly376Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

9-86585725-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585725
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585725
    reference: chr 9
allele count: 1
allele frequency: 8.258047467256841e-6
allele num: 121094
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1118A>G
  hgvsp: ENSP00000365440.2:p.Tyr373Cys
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1118A>G
  hgvsp: ENSP00000365439.3:p.Tyr373Cys
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.48A>G
  hgvsp: ENSP00000473957.1:p.Tyr17Cys
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1118A>G
  hgvsp: ENSP00000365458.4:p.Tyr373Cys
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1118A>G
  hgvsp: ENSP00000317788.4:p.Tyr373Cys
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1118A>G
  hgvsp: ENSP00000353552.5:p.Tyr373Cys
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1046A>G
  hgvsp: ENSP00000409456.1:p.Tyr349Cys
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.260A>G
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16540
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4408
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3510
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1643
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr373Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

9-86585750-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585750
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585750
    reference: chr 9
allele count: 1
allele frequency: 8.264189613566494e-6
allele num: 121004
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1109-16T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1037-16T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1109-16T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.39-16T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1109-16T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.251-16T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1109-16T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1109-16T>C
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4408
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4899
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

9-86585754-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585754
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585754
    reference: chr 9
allele count: 37
allele frequency: 3.058811858269539e-4
allele num: 120962
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1109-20C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1109-20C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1109-20C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1109-20C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1037-20C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.39-20C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1109-20C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.251-20C>T
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7497
  bin: 9.75e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28429
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1641
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD

9-86585758-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585758
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585758
    reference: chr 9
allele count: 1
allele frequency: 8.269520202437855e-6
allele num: 120926
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1109-24C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1037-24C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1109-24C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1109-24C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.39-24C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1109-24C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1109-24C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.251-24C>T
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16534
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2185
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1641
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3505
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28412
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

9-86585767-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585767
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585767
    reference: chr 9
allele count: 1
allele frequency: 8.273625337150233e-6
allele num: 120866
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1109-33T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1109-33T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.39-33T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1109-33T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1037-33T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.251-33T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1109-33T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1109-33T>C
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23158
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

9-86585771-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585771
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585771
    reference: chr 9
allele count: 1
allele frequency: 8.274583788435442e-6
allele num: 120852
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1109-37C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1109-37C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1109-37C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1109-37C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1109-37C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1037-37C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.251-37C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.39-37C>A
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9963
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28390
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4898
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3688
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

9-86585775-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585775
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585775
    reference: chr 9
allele count: 15
allele frequency: 1.241701296336153e-4
allele num: 120802
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1108+37C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.250+37C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1108+37C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1036+37C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1108+37C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1108+37C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1108+37C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.38+37C>A
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3499
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

9-86585776-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585776
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585776
    reference: chr 9
allele count: 1371
allele frequency: 1.134971356667439e-2
allele num: 120796
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1108+36T>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.38+36T>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1036+36T>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1108+36T>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1108+36T>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1108+36T>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1108+36T>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.250+36T>A
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2003
  bin: 4.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.75e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 6.25e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 9.75e1
  variant carriers: 491
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 4.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 16258
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.25e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 22671
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 5.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 8.25e1
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 9732
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4287
  bin: 3.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 8306
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3584
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3432
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1585
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 25
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/9-86585795-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585795
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585795
    reference: chr 9
allele count: 1
allele frequency: 8.291048983517394e-6
allele num: 120612
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1108+17G>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.250+17G>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1108+17G>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1108+17G>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1108+17G>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1108+17G>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1036+17G>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.38+17G>T
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22591
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4909
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3510
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/9-86585796-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585796
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585796
    reference: chr 9
allele count: 1
allele frequency: 8.292011476143882e-6
allele num: 120598
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.38+16T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1108+16T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1108+16T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1108+16T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1108+16T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1036+16T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1108+16T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.250+16T>G
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4500
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22588
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10017
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

9-86585797-AAGGAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585797
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585792
    reference: chr 9
allele count: 1
allele frequency: 8.292011476143882e-6
allele num: 120598
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1108+10_1108+14delCTCCT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1108+10_1108+14delCTCCT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.250+10_250+14delCTCCT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1108+10_1108+14delCTCCT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1108+10_1108+14delCTCCT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1108+10_1108+14delCTCCT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1036+10_1036+14delCTCCT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.38+10_38+14delCTCCT
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28142
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: AAGGAG
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

9-86585799-GGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585799
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585797
    reference: chr 9
allele count: 1
allele frequency: 8.29476268683953e-6
allele num: 120558
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.250+11_250+12delTC
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1036+11_1036+12delTC
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1108+11_1108+12delTC
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1108+11_1108+12delTC
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1108+11_1108+12delTC
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1108+11_1108+12delTC
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.38+11_38+12delTC
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1108+11_1108+12delTC
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4502
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3673
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8443
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: GGA
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

9-86585803-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585803
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585803
    reference: chr 9
allele count: 1
allele frequency: 8.298755186721992e-6
allele num: 120500
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1108+9T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1108+9T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1108+9T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1108+9T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1108+9T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1036+9T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.250+9T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.38+9T>C
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4499
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10013
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22513
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3505
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28057
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8441
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

9-86585819-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585819
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585819
    reference: chr 9
allele count: 5
allele frequency: 4.162296255598289e-5
allele num: 120126
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1101C>T
  hgvsp: ENST00000376281.4:c.1101C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1101C>T
  hgvsp: ENST00000351839.3:c.1101C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1029C>T
  hgvsp: ENST00000457156.1:c.1029C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1101C>T
  hgvsp: ENST00000376264.2:c.1101C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.243C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1101C>T
  hgvsp: ENST00000360384.5:c.1101C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1101C>T
  hgvsp: ENST00000376263.3:c.1101C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.31C>T
  hgvsp: ENST00000481820.2:c.31C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4501
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1628
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser367Ser
num of homozygotes: 1
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

9-86585819-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585819
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585819
    reference: chr 9
allele count: 1
allele frequency: 8.324592511196577e-6
allele num: 120126
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.31C>A
  hgvsp: ENST00000481820.2:c.31C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1101C>A
  hgvsp: ENST00000351839.3:c.1101C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1101C>A
  hgvsp: ENST00000376264.2:c.1101C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1101C>A
  hgvsp: ENST00000360384.5:c.1101C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1101C>A
  hgvsp: ENST00000376263.3:c.1101C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1029C>A
  hgvsp: ENST00000457156.1:c.1029C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.243C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1101C>A
  hgvsp: ENST00000376281.4:c.1101C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9975
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2118
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27825
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8388
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser367Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS

9-86585835-CAGAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585835
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585831
    reference: chr 9
allele count: 1
allele frequency: 8.369601606963508e-6
allele num: 119480
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1093-12_1093-9delTTCT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1093-12_1093-9delTTCT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1021-12_1021-9delTTCT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.23-12_23-9delTTCT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1093-12_1093-9delTTCT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.223_226delTTCT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1093-12_1093-9delTTCT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1093-12_1093-9delTTCT
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9848
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4453
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7534
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4877
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1055
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: CAGAA
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD

9-86585837-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585837
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585837
    reference: chr 9
allele count: 1
allele frequency: 8.376612497905846e-6
allele num: 119380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1093-10C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1093-10C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1021-10C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.225C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1093-10C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1093-10C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.23-10C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1093-10C>T
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9844
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16113
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1101
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

9-86585840-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585840
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585840
    reference: chr 9
allele count: 2
allele frequency: 1.678190239645566e-5
allele num: 119176
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1021-13T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1093-13T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1093-13T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1093-13T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.222T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1093-13T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.23-13T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1093-13T>C
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21509
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1626
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8162
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3452
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

9-86585841-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585841
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585840
    reference: chr 9
allele count: 2
allele frequency: 1.6787255115916e-5
allele num: 119138
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1093-15delT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1021-15delT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.220delT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1093-15delT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1093-15delT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1093-15delT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.23-15delT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1093-15delT
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9791
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4438
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21498
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26435
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8154
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7535
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4861
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1344
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: GA
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

9-86585845-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585845
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585845
    reference: chr 9
allele count: 1
allele frequency: 8.393627557957998e-6
allele num: 119138
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1093-18T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.217T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1093-18T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1021-18T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1093-18T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1093-18T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.23-18T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1093-18T>C
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7536
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3664
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26469
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

9-86585846-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585846
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585846
    reference: chr 9
allele count: 2
allele frequency: 1.678781875870868e-5
allele num: 119134
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1093-19T>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1093-19T>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.23-19T>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1021-19T>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1093-19T>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1093-19T>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.216T>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1093-19T>A
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21473
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9762
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3454
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4861
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

9-86585849-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585849
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585849
    reference: chr 9
allele count: 2
allele frequency: 1.680079299742948e-5
allele num: 119042
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1093-22A>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1093-22A>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1021-22A>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1093-22A>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.23-22A>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.213A>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1093-22A>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1093-22A>T
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8130
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3660
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ

9-86585849-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585849
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585849
    reference: chr 9
allele count: 11
allele frequency: 9.240436148586214e-5
allele num: 119042
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1093-22A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1093-22A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1021-22A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.23-22A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1093-22A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1093-22A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.213A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1093-22A>G
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9749
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3448
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4858
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3660
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1625
  bin: 8.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

9-86585852-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585852
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585852
    reference: chr 9
allele count: 1
allele frequency: 8.405904307185366e-6
allele num: 118964
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1093-25T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1093-25T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.23-25T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1021-25T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1093-25T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.210T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1093-25T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1093-25T>C
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4854
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1599
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

9-86585865-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585865
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585865
    reference: chr 9
allele count: 31
allele frequency: 2.619039572843094e-4
allele num: 118364
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1093-38G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1093-38G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1021-38G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.23-38G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1093-38G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1093-38G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1093-38G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.197G>A
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19133
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4419
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15128
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9512
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1616
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1946
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7555
  bin: 9.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 3647
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD

9-86585866-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585866
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585866
    reference: chr 9
allele count: 5
allele frequency: 4.228329809725158e-5
allele num: 118250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.23-39C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1093-39C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1093-39C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.196C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1021-39C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1093-39C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1093-39C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1093-39C>T
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1912
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4457
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15078
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18911
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2109
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4802
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2189
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3366
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

9-86585867-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585867
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585867
    reference: chr 9
allele count: 1
allele frequency: 8.457088731774973e-6
allele num: 118244
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1093-40A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1021-40A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1093-40A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.195A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1093-40A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1093-40A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1093-40A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.23-40A>G
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9425
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1620
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2190
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1224
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7762
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD

9-86585869-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585869
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585869
    reference: chr 9
allele count: 1
allele frequency: 8.461955050094773e-6
allele num: 118176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1021-42C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1093-42C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.193C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1093-42C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1093-42C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1093-42C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1093-42C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.23-42C>T
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9413
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3636
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1933
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7531
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4794
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ

9-86585869-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585869
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585869
    reference: chr 9
allele count: 1
allele frequency: 8.461955050094773e-6
allele num: 118176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1093-42C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1093-42C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1021-42C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1093-42C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.23-42C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.193C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1093-42C>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1093-42C>A
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18772
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9413
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3357
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7531
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1620
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4794
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21535
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1933
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

9-86585870-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585870
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585870
    reference: chr 9
allele count: 2
allele frequency: 1.693021365929638e-5
allele num: 118132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.23-43A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1093-43A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1093-43A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1093-43A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.192A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1021-43A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1093-43A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1093-43A>G
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4423
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18938
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2091
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3633
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7533
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2188
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1295
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

9-86585879-C-CACAAGTAACTATTCCCAAAGATGTAAGTATCTTTAATACTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585879
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585920
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 116874
alternate allele: CACAAGTAACTATTCCCAAAGATGTAAGTATCTTTAATACTA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17728
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6972
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3264
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1915
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3300
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 749
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7540
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2193
  bin: 9.25e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: C
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

9-86585879-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86585879
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86585879
    reference: chr 9
allele count: 4
allele frequency: 3.42248917637798e-5
allele num: 116874
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.23-52G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1093-52G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1093-52G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1093-52G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165119
  ensembl transcript: ENST00000492865
  gene symbol: HNRNPK
  hgvsc: ENST00000492865.1:n.183G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1021-52G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1093-52G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1093-52G>A
  variant of: http://identifiers.org/hgnc/5044
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15780
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17728
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7540
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4760
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14413
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

9-86586103-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586103
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586103
    reference: chr 9
allele count: 1
allele frequency: 8.337363058811759e-6
allele num: 119942
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+85G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+85G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+85G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+85G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+85G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+85G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+85G>A
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9103
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10941
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6649
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6428
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2856
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

9-86586106-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586106
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586106
    reference: chr 9
allele count: 1
allele frequency: 8.335000333400014e-6
allele num: 119976
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+82T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+82T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+82T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+82T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+82T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+82T>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+82T>C
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6646
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9091
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13923
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4436
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3686
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6407
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4689
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS

9-86586109-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586109
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586109
    reference: chr 9
allele count: 1
allele frequency: 8.330695279828055e-6
allele num: 120038
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+79C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+79C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+79C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+79C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+79C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+79C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+79C>G
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6647
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18024
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 666
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2202
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/9-86586116-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586116
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586116
    reference: chr 9
allele count: 1
allele frequency: 8.32251406504877e-6
allele num: 120156
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+72T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+72T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+72T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+72T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+72T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+72T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+72T>G
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9071
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4180
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12047
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2207
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18021
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6468
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4670
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4409
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2825
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

9-86586124-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586124
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586124
    reference: chr 9
allele count: 1
allele frequency: 8.314901967305805e-6
allele num: 120266
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+64G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+64G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+64G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+64G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+64G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+64G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+64G>A
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12110
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16402
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4672
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3678
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/9-86586133-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586133
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586133
    reference: chr 9
allele count: 1
allele frequency: 8.282808203293245e-6
allele num: 120732
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+55T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+55T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+55T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+55T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+55T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+55T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+55T>G
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4178
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4424
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18026
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum

9-86586135-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586135
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586135
    reference: chr 9
allele count: 3
allele frequency: 2.483155925637757e-5
allele num: 120814
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+53C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+53C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+53C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+53C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+53C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+53C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+53C>T
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11982
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12164
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17325
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18023
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP

9-86586139-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586139
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586139
    reference: chr 9
allele count: 1
allele frequency: 8.26801600687899e-6
allele num: 120948
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+49C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+49C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+49C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+49C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+49C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+49C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+49C>T
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4175
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7171
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1542
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6703
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17485
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

9-86586142-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586142
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586142
    reference: chr 9
allele count: 1
allele frequency: 8.263233568560049e-6
allele num: 121018
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+46A>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+46A>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+46A>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+46A>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+46A>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+46A>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+46A>T
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4175
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17566
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18022
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6710
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3686
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

9-86586143-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586143
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586143
    reference: chr 9
allele count: 1
allele frequency: 8.262687356435807e-6
allele num: 121026
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+45G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+45G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+45G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+45G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+45G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+45G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+45G>A
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12085
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18021
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17595
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6711
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

9-86586157-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586157
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586157
    reference: chr 9
allele count: 1
allele frequency: 8.248647221855616e-6
allele num: 121232
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+31C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+31C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+31C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+31C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+31C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+31C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+31C>T
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12204
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4426
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6737
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2862
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4705
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3685
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD

9-86586161-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586161
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586161
    reference: chr 9
allele count: 2
allele frequency: 1.649049323065253e-5
allele num: 121282
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+27A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+27A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+27A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+27A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+27A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+27A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+27A>G
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7341
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9082
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17841
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6741
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3685
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

9-86586163-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586163
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586163
    reference: chr 9
allele count: 1
allele frequency: 8.24334350012365e-6
allele num: 121310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+25G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+25G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+25G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+25G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+25G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+25G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+25G>A
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7341
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1543
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18020
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3685
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2865
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4424
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2221
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6744
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

9-86586167-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586167
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586167
    reference: chr 9
allele count: 2
allele frequency: 1.64836976230508e-5
allele num: 121332
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+21G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+21G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+21G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+21G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+21G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+21G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+21G>A
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12224
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12212
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2865
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18021
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3684
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4426
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

9-86586168-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586168
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586168
    reference: chr 9
allele count: 4
allele frequency: 3.296304842271814e-5
allele num: 121348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+20C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+20C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+20C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+20C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+20C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+20C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+20C>T
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12211
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9085
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3685
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2220
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4425
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18023
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

9-86586168-GAAC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586168
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586165
    reference: chr 9
allele count: 4
allele frequency: 3.296304842271814e-5
allele num: 121348
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+17_1092+19delGTT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+17_1020+19delGTT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+17_1092+19delGTT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+17_1092+19delGTT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+17_1092+19delGTT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+17_1092+19delGTT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+17_22+19delGTT
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12241
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9085
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12211
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7327
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2536
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2862
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4425
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: GAAC
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

9-86586174-CTA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586174
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586172
    reference: chr 9
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+12_1092+13delTA
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+12_1092+13delTA
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+12_22+13delTA
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+12_1092+13delTA
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+12_1092+13delTA
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+12_1020+13delTA
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+12_1092+13delTA
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12206
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9081
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4712
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6753
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18021
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: CTA
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/9-86586176-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586176
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586176
    reference: chr 9
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+12T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+12T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+12T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+12T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+12T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+12T>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+12T>G
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9081
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12267
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7334
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4177
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2535
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3685
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2860
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18021
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

9-86586178-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586178
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586178
    reference: chr 9
allele count: 42
allele frequency: 3.460606759718537e-4
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1092+10C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1092+10C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1020+10C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.22+10C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1092+10C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1092+10C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1092+10C>G
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12205
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9079
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6635
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7333
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 9.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2859
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2222
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17912
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

9-86586193-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586193
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586193
    reference: chr 9
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1087C>T
  hgvsp: ENSP00000365440.2:p.Pro363Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1087C>T
  hgvsp: ENSP00000317788.4:p.Pro363Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1087C>T
  hgvsp: ENSP00000353552.5:p.Pro363Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.17C>T
  hgvsp: ENSP00000473957.1:p.Pro7Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1087C>T
  hgvsp: ENSP00000365439.3:p.Pro363Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1087C>T
  hgvsp: ENSP00000365458.4:p.Pro363Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1015C>T
  hgvsp: ENSP00000409456.1:p.Pro339Ser
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12275
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2530
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9088
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2222
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18006
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro363Ser
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

9-86586197-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586197
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586197
    reference: chr 9
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.13T>C
  hgvsp: ENST00000481820.2:c.13T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1011T>C
  hgvsp: ENST00000457156.1:c.1011T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1083T>C
  hgvsp: ENST00000376264.2:c.1083T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1083T>C
  hgvsp: ENST00000360384.5:c.1083T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1083T>C
  hgvsp: ENST00000376263.3:c.1083T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1083T>C
  hgvsp: ENST00000376281.4:c.1083T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1083T>C
  hgvsp: ENST00000351839.3:c.1083T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4181
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9087
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4429
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3685
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Tyr361Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

9-86586199-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586199
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586199
    reference: chr 9
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1081T>C
  hgvsp: ENSP00000365439.3:p.Tyr361His
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1081T>C
  hgvsp: ENSP00000317788.4:p.Tyr361His
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000473957
  ensembl transcript: ENST00000481820
  gene symbol: HNRNPK
  hgvsc: ENST00000481820.2:c.11T>C
  hgvsp: ENSP00000473957.1:p.Tyr5His
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1081T>C
  hgvsp: ENSP00000353552.5:p.Tyr361His
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1081T>C
  hgvsp: ENSP00000365440.2:p.Tyr361His
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.1009T>C
  hgvsp: ENSP00000409456.1:p.Tyr337His
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1081T>C
  hgvsp: ENSP00000365458.4:p.Tyr361His
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9087
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4182
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2222
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6759
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4429
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Tyr361His
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

9-86586212-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586212
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586212
    reference: chr 9
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1068A>G
  hgvsp: ENST00000376263.3:c.1068A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1068A>G
  hgvsp: ENST00000376281.4:c.1068A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.996A>G
  hgvsp: ENST00000457156.1:c.996A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1068A>G
  hgvsp: ENST00000376264.2:c.1068A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1068A>G
  hgvsp: ENST00000351839.3:c.1068A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1068A>G
  hgvsp: ENST00000360384.5:c.1068A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7345
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9088
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4182
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17950
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18006
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2221
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4712
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu356Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

9-86586218-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586218
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586218
    reference: chr 9
allele count: 34
allele frequency: 2.800566702909295e-4
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1062A>T
  hgvsp: ENST00000360384.5:c.1062A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1062A>T
  hgvsp: ENST00000376264.2:c.1062A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.990A>T
  hgvsp: ENST00000457156.1:c.990A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1062A>T
  hgvsp: ENST00000376263.3:c.1062A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1062A>T
  hgvsp: ENST00000351839.3:c.1062A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1062A>T
  hgvsp: ENST00000376281.4:c.1062A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6638
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7335
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 9.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6763
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17938
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18013
  bin: 9.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2874
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4712
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro354Pro
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

9-86586220-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586220
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586220
    reference: chr 9
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1060C>T
  hgvsp: ENSP00000365458.4:p.Pro354Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1060C>T
  hgvsp: ENSP00000365439.3:p.Pro354Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1060C>T
  hgvsp: ENSP00000365440.2:p.Pro354Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1060C>T
  hgvsp: ENSP00000353552.5:p.Pro354Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1060C>T
  hgvsp: ENSP00000317788.4:p.Pro354Ser
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.988C>T
  hgvsp: ENSP00000409456.1:p.Pro330Ser
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7332
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12230
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17943
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2222
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2876
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4432
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro354Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

9-86586227-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586227
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586227
    reference: chr 9
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1053A>G
  hgvsp: ENST00000376263.3:c.1053A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1053A>G
  hgvsp: ENST00000360384.5:c.1053A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1053A>G
  hgvsp: ENST00000376264.2:c.1053A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1053A>G
  hgvsp: ENST00000351839.3:c.1053A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.981A>G
  hgvsp: ENST00000457156.1:c.981A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1053A>G
  hgvsp: ENST00000376281.4:c.1053A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12312
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6771
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4436
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17946
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr351Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

9-86586228-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586228
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586228
    reference: chr 9
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1052C>A
  hgvsp: ENSP00000317788.4:p.Thr351Lys
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1052C>A
  hgvsp: ENSP00000365439.3:p.Thr351Lys
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1052C>A
  hgvsp: ENSP00000365440.2:p.Thr351Lys
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1052C>A
  hgvsp: ENSP00000353552.5:p.Thr351Lys
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.980C>A
  hgvsp: ENSP00000409456.1:p.Thr327Lys
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1052C>A
  hgvsp: ENSP00000365458.4:p.Thr351Lys
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12313
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4184
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6770
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2874
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3689
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr351Lys
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

9-86586235-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586235
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586235
    reference: chr 9
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.973A>G
  hgvsp: ENSP00000409456.1:p.Ile325Val
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1045A>G
  hgvsp: ENSP00000365440.2:p.Ile349Val
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1045A>G
  hgvsp: ENSP00000317788.4:p.Ile349Val
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1045A>G
  hgvsp: ENSP00000353552.5:p.Ile349Val
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1045A>G
  hgvsp: ENSP00000365458.4:p.Ile349Val
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1045A>G
  hgvsp: ENSP00000365439.3:p.Ile349Val
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7316
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2875
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2224
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17946
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17995
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile349Val
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

9-86586242-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586242
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586242
    reference: chr 9
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1038C>T
  hgvsp: ENST00000360384.5:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1038C>T
  hgvsp: ENST00000376263.3:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1038C>T
  hgvsp: ENST00000376264.2:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1038C>T
  hgvsp: ENST00000351839.3:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.966C>T
  hgvsp: ENST00000457156.1:c.966C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1038C>T
  hgvsp: ENST00000376281.4:c.1038C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9093
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4185
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4723
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17942
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17996
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2224
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2876
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp346Asp
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD

9-86586257-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586257
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586257
    reference: chr 9
allele count: 2
allele frequency: 1.64774506088418e-5
allele num: 121378
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1023T>C
  hgvsp: ENST00000376281.4:c.1023T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.951T>C
  hgvsp: ENST00000457156.1:c.951T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1023T>C
  hgvsp: ENST00000351839.3:c.1023T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1023T>C
  hgvsp: ENST00000376263.3:c.1023T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1023T>C
  hgvsp: ENST00000376264.2:c.1023T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1023T>C
  hgvsp: ENST00000360384.5:c.1023T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12240
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7291
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6763
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17997
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2879
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala341Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD

9-86586259-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586259
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586259
    reference: chr 9
allele count: 11
allele frequency: 9.063493894500931e-5
allele num: 121366
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1021G>A
  hgvsp: ENSP00000365458.4:p.Ala341Thr
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1021G>A
  hgvsp: ENSP00000365440.2:p.Ala341Thr
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1021G>A
  hgvsp: ENSP00000317788.4:p.Ala341Thr
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.949G>A
  hgvsp: ENSP00000409456.1:p.Ala317Thr
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1021G>A
  hgvsp: ENSP00000365439.3:p.Ala341Thr
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1021G>A
  hgvsp: ENSP00000353552.5:p.Ala341Thr
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9093
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17890
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6760
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2879
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala341Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

9-86586263-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586263
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586263
    reference: chr 9
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.945C>T
  hgvsp: ENST00000457156.1:c.945C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1017C>T
  hgvsp: ENST00000376263.3:c.1017C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1017C>T
  hgvsp: ENST00000376264.2:c.1017C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1017C>T
  hgvsp: ENST00000351839.3:c.1017C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1017C>T
  hgvsp: ENST00000376281.4:c.1017C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1017C>T
  hgvsp: ENST00000360384.5:c.1017C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4186
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17993
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17881
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3691
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6763
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Phe339Phe
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP

9-86586276-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586276
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586277
    reference: chr 9
allele count: 1
allele frequency: 8.244430886935875e-6
allele num: 121294
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.937-6dupT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1009-6dupT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1009-6dupT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1009-6dupT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1009-6dupT
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1009-6dupT
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 12296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2526
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4728
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17727
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4441
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1009-6dupT
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

9-86586278-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586278
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586278
    reference: chr 9
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1009-7C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1009-7C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.937-7C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1009-7C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1009-7C>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1009-7C>G
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7122
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9093
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12299
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6643
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2224
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17699
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17994
  bin: 9.75e1
  variant carriers: 1
hgvs: c.1009-7C>G
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum

9-86586280-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586280
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586280
    reference: chr 9
allele count: 5
allele frequency: 4.122963256151461e-5
allele num: 121272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.937-9C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1009-9C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1009-9C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1009-9C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1009-9C>T
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1009-9C>T
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4186
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9095
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17673
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4441
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6756
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4726
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2223
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP

9-86586282-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586282
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586282
    reference: chr 9
allele count: 4
allele frequency: 3.298914657077821e-5
allele num: 121252
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.937-11A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1009-11A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1009-11A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1009-11A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1009-11A>G
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1009-11A>G
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4188
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17558
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2223
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6744
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4440
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17992
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

9-86586282-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586282
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586282
    reference: chr 9
allele count: 1
allele frequency: 8.247286642694553e-6
allele num: 121252
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1009-11A>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1009-11A>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1009-11A>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1009-11A>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1009-11A>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.937-11A>C
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4188
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9094
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4725
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17558
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3692
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6744
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17992
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ReadPosRankSum

9-86586294-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586294
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586294
    reference: chr 9
allele count: 1
allele frequency: 8.261322141995606e-6
allele num: 121046
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1009-23G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1009-23G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.937-23G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1009-23G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1009-23G>A
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1009-23G>A
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12039
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9087
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4186
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3691
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4440
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2847
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6601
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP

9-86586296-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 86586296
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 86586296
    reference: chr 9
allele count: 1
allele frequency: 8.260230295220631e-6
allele num: 121062
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365439
  ensembl transcript: ENST00000376263
  gene symbol: HNRNPK
  hgvsc: ENST00000376263.3:c.1009-25A>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000353552
  ensembl transcript: ENST00000360384
  gene symbol: HNRNPK
  hgvsc: ENST00000360384.5:c.1009-25A>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365440
  ensembl transcript: ENST00000376264
  gene symbol: HNRNPK
  hgvsc: ENST00000376264.2:c.1009-25A>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000317788
  ensembl transcript: ENST00000351839
  gene symbol: HNRNPK
  hgvsc: ENST00000351839.3:c.1009-25A>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000409456
  ensembl transcript: ENST00000457156
  gene symbol: HNRNPK
  hgvsc: ENST00000457156.1:c.937-25A>C
  variant of: http://identifiers.org/hgnc/5044
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165119
  ensembl protein: ENSP00000365458
  ensembl transcript: ENST00000376281
  gene symbol: HNRNPK
  hgvsc: ENST00000376281.4:c.1009-25A>C
  variant of: http://identifiers.org/hgnc/5044
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 2187
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7471
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 3685
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8473
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1643
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28572
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.499175090740018e-5
allele num: 66674
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.188e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.56e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-1

DP
type: SiteQuality
SIO_000300: 1.789901e6

MQRankSum
type: SiteQuality
SIO_000300: 2.27e-1

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28567
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2187
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7470
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3686
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4902
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8472
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499880009599232e-5
allele num: 66672
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10158
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.789475e6

MQRankSum
type: SiteQuality
SIO_000300: 2.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 4.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.095e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.11e0

QD
type: SiteQuality
SIO_000300: 1.311e1

GenotypeQuality
all individuals: 28464
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2186
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8467
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3686
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1643
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3510
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7469
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10102
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500600240096038e-5
allele num: 66640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.94e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.007e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

QD
type: SiteQuality
SIO_000300: 1.164e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.549e-1

DP
type: SiteQuality
SIO_000300: 1.788275e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.572e0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3684
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3503
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8457
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4894
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2183
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 36
allele frequency: 3.570011900039667e-3
allele num: 10084
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.79025e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.358e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.85e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.94e-1

QD
type: SiteQuality
SIO_000300: 1.296e1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.01e0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8454
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4895
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3690
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7473
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501276084671971e-5
allele num: 66610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10058
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.210000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.425e0

FS
type: SiteQuality
SIO_000300: 7.231e0

DP
type: SiteQuality
SIO_000300: 1.78788e6

MQRankSum
type: SiteQuality
SIO_000300: 7.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.451e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.058e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3501
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28381
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2185
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3688
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7473
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4896
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8452
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10028
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66584
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.878e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.64e0

VQSLOD
type: SiteQuality
SIO_000300: 2.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

QD
type: SiteQuality
SIO_000300: 1.661e1

DP
type: SiteQuality
SIO_000300: 1.78704e6

GenotypeQuality
all individuals: 7473
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2185
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1640
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3501
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8455
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.978048293753742e-5
allele num: 10022
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.11e-1

QD
type: SiteQuality
SIO_000300: 5.15e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.342e0

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.13e-1

DP
type: SiteQuality
SIO_000300: 1.786821e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28364
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8447
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2185
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7485
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 3688
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1640
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4891
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.592464569650881e-4
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.652842889770405e-4
allele num: 66552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10006
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.975e1

DP
type: SiteQuality
SIO_000300: 1.787111e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.19e-1

QD
type: SiteQuality
SIO_000300: 1.256e1

VQSLOD
type: SiteQuality
SIO_000300: 3.26e0

FS
type: SiteQuality
SIO_000300: 5.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.719e0

GenotypeQuality
all individuals: 80
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27983
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4776
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2110
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8416
bin: 9.75e1
variant carriers: 1345

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 379
allele frequency: 5.694795047481669e-3
allele num: 66552
num of homozygotes: 7

South Asian
type: Population
allele count: 138
allele frequency: 8.359583232372183e-3
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.0e-4
allele num: 10000
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 500
allele frequency: 7.559721802237677e-2
allele num: 6614
num of homozygotes: 11

East Asian
type: Population
allele count: 324
allele frequency: 3.745664739884393e-2
allele num: 8650
num of homozygotes: 6

Latino
type: Population
allele count: 2
allele frequency: 1.728309713100588e-4
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 26
allele frequency: 2.888888888888889e-2
allele num: 900
num of homozygotes: 1

FS
type: SiteQuality
SIO_000300: 5.28e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

QD
type: SiteQuality
SIO_000300: 1.391e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.19e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.57e0

DP
type: SiteQuality
SIO_000300: 1.864398e6

VQSLOD
type: SiteQuality
SIO_000300: 4.83e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.48e-1

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3674
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8442
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 28145
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2196
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1629
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7536
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66478
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.797e0

FS
type: SiteQuality
SIO_000300: 5.494e0

QD
type: SiteQuality
SIO_000300: 1.276e1

VQSLOD
type: SiteQuality
SIO_000300: -2.433e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.269e0

DP
type: SiteQuality
SIO_000300: 1.794996e6

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28136
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3673
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 7536
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4910
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8443
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3510
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2196
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504347564461293e-5
allele num: 66474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

FS
type: SiteQuality
SIO_000300: 3.105e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

DP
type: SiteQuality
SIO_000300: 1.794815e6

QD
type: SiteQuality
SIO_000300: 1.339e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.19e-1

GenotypeQuality
all individuals: 2196
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8443
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4910
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1629
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7537
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3674
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9898
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66474
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.13e-1

MQ
type: SiteQuality
SIO_000300: 5.247e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.629999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.437e0

FS
type: SiteQuality
SIO_000300: 4.367e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.794877e6

QD
type: SiteQuality
SIO_000300: 6.24e0

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.03e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66452
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.97e-1

FS
type: SiteQuality
SIO_000300: 1.0153e1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.7946e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.437e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.296e0

MQ
type: SiteQuality
SIO_000300: 5.916e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9872
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66416
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

MQ
type: SiteQuality
SIO_000300: 5.808e1

MQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

FS
type: SiteQuality
SIO_000300: 4.302e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.67e-1

DP
type: SiteQuality
SIO_000300: 1.793725e6

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.308e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
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allele count: 2
allele frequency: 2.222222222222222e-3
allele num: 900
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730702665282105e-4
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.510802235987309e-5
allele num: 66190
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.939e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.81e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

FS
type: SiteQuality
SIO_000300: 1.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.52e-2

DP
type: SiteQuality
SIO_000300: 1.788581e6

QD
type: SiteQuality
SIO_000300: 1.616e1

VQSLOD
type: SiteQuality
SIO_000300: -4.43e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.89e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510802235987309e-5
allele num: 66190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9784
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.89e-1

QD
type: SiteQuality
SIO_000300: 1.616e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.43e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.52e-2

MQ
type: SiteQuality
SIO_000300: 5.939e1

MQRankSum
type: SiteQuality
SIO_000300: -5.73e-1

DP
type: SiteQuality
SIO_000300: 1.788581e6

FS
type: SiteQuality
SIO_000300: 1.96e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518787400139728e-5
allele num: 65842
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.82e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.774606e6

MQ
type: SiteQuality
SIO_000300: 5.869e1

MQRankSum
type: SiteQuality
SIO_000300: 2.13e-1

QD
type: SiteQuality
SIO_000300: 1.232e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9630
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.520172691617768e-5
allele num: 65782
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

DP
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BaseQRankSum
type: SiteQuality
SIO_000300: -8.63e-1

ReadPosRankSum
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SIO_000300: 5.44e-1

FS
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
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MQRankSum
type: SiteQuality
SIO_000300: 7.69e-1

ClippingRankSum
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

South Asian
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East Asian
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allele frequency: 2.361832782239018e-4
allele num: 8468
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.01e-1

FS
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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MQ
type: SiteQuality
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QD
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 2
allele frequency: 1.741250217656277e-4
allele num: 11486
num of homozygotes: 0

Other
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65648
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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BaseQRankSum
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FS
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MQ
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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QD
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65648
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.074596039363382e-5
allele num: 16462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.275e0

MQ
type: SiteQuality
SIO_000300: 5.908e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.37e-1

DP
type: SiteQuality
SIO_000300: 1.764921e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.385e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

QD
type: SiteQuality
SIO_000300: 1.849e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.52e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1625
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2195
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.741250217656277e-4
allele num: 11486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.71e-1

QD
type: SiteQuality
SIO_000300: 1.861e1

MQ
type: SiteQuality
SIO_000300: 6.037e1

VQSLOD
type: SiteQuality
SIO_000300: -1.26e-1

FS
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 1.764896e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.53e-1

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 26287
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9566
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.742767514813524e-4
allele num: 11476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65602
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.87e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

DP
type: SiteQuality
SIO_000300: 1.762811e6

QD
type: SiteQuality
SIO_000300: 1.462e1

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 10

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8130
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variant carriers: 0

GenotypeQuality
all individuals: 26287
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.21947501600561e-4
allele num: 65602
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.614151272220286e-4
allele num: 11476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
type: SiteQuality
SIO_000300: 1.462e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

DP
type: SiteQuality
SIO_000300: 1.762811e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.87e0

GenotypeQuality
all individuals: 7532
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3447
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variant carriers: 0

GenotypeQuality
all individuals: 8107
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5253668507276e-5
allele num: 65558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.929e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e0

DP
type: SiteQuality
SIO_000300: 1.75838e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.791e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.82e0

MQRankSum
type: SiteQuality
SIO_000300: 7.57e-1

QD
type: SiteQuality
SIO_000300: 1.375e1

VQSLOD
type: SiteQuality
SIO_000300: -8.357e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

GenotypeQuality
all individuals: 4817
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1092
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 927
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variant carriers: 0

GenotypeQuality
all individuals: 7831
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.198753296571566e-4
allele num: 8342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 29
allele frequency: 4.445261963886078e-4
allele num: 65238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.745845723281441e-5
allele num: 11434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

QD
type: SiteQuality
SIO_000300: 1.283e1

DP
type: SiteQuality
SIO_000300: 1.734667e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.99e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.97e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3636
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.199040767386091e-4
allele num: 8340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.60433421327276e-5
allele num: 65156
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.089392278650591e-5
allele num: 16422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.25e1

MQ
type: SiteQuality
SIO_000300: 5.916e1

FS
type: SiteQuality
SIO_000300: 1.791e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.708e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-1

DP
type: SiteQuality
SIO_000300: 1.734032e6

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21824
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53477807109092e-5
allele num: 65156
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.81e-1

FS
type: SiteQuality
SIO_000300: 7.987e0

MQRankSum
type: SiteQuality
SIO_000300: -1.021e0

VQSLOD
type: SiteQuality
SIO_000300: -1.215e0

DP
type: SiteQuality
SIO_000300: 1.72955e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

MQ
type: SiteQuality
SIO_000300: 5.901e1

QD
type: SiteQuality
SIO_000300: 1.199e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 1.75e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1259
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8334
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535909565644775e-5
allele num: 65108
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.006e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.83e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.57e-1

QD
type: SiteQuality
SIO_000300: 1.085e1

DP
type: SiteQuality
SIO_000300: 1.728094e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.916e0

MQ
type: SiteQuality
SIO_000300: 5.903e1

GenotypeQuality
all individuals: 737
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
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GenotypeQuality
all individuals: 806
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1276
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 611
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variant carriers: 0

GenotypeQuality
all individuals: 319
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GenotypeQuality
all individuals: 175
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GenotypeQuality
all individuals: 1259
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
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GenotypeQuality
all individuals: 7718
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2189
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3636
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65108
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.199904007679386e-4
allele num: 8334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.085e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.57e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.83e-1

DP
type: SiteQuality
SIO_000300: 1.728094e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.916e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.576e-1

MQ
type: SiteQuality
SIO_000300: 5.903e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.006e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8326
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.12630236019562e-4
allele num: 9406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65090
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

QD
type: SiteQuality
SIO_000300: 8.74e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e0

DP
type: SiteQuality
SIO_000300: 1.726471e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.87e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9134
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.683e0

DP
type: SiteQuality
SIO_000300: 1.732136e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.138e0

VQSLOD
type: SiteQuality
SIO_000300: 9.89e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.53e-1

QD
type: SiteQuality
SIO_000300: 5.33e0

MQ
type: SiteQuality
SIO_000300: 4.712e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.2e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1915
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.220065932698886e-5
allele num: 64308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9134
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.732136e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.2e-1

FS
type: SiteQuality
SIO_000300: 6.683e0

MQRankSum
type: SiteQuality
SIO_000300: -5.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.89e-1

MQ
type: SiteQuality
SIO_000300: 4.712e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.138e0

QD
type: SiteQuality
SIO_000300: 5.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.36e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16242
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10038
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.516300227445034e-5
allele num: 65950
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.289091e6

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQ
type: SiteQuality
SIO_000300: 5.675e1

VQSLOD
type: SiteQuality
SIO_000300: -1.746e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.158e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.439e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

FS
type: SiteQuality
SIO_000300: 3.642e0

QD
type: SiteQuality
SIO_000300: 1.19e0

GenotypeQuality
all individuals: 69
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variant carriers: 0

GenotypeQuality
all individuals: 403
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 546
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GenotypeQuality
all individuals: 794
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10046
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16282
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65940
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.798e0

MQ
type: SiteQuality
SIO_000300: 5.763e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.917e0

MQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

DP
type: SiteQuality
SIO_000300: 2.292132e6

VQSLOD
type: SiteQuality
SIO_000300: -2.07e0

QD
type: SiteQuality
SIO_000300: 1.109e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16300
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515794579518584e-5
allele num: 65972
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10050
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

QD
type: SiteQuality
SIO_000300: 1.469e1

FS
type: SiteQuality
SIO_000300: 2.085e0

VQSLOD
type: SiteQuality
SIO_000300: 4.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 2.295857e6

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10074
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514692517418964e-5
allele num: 66020
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e0

QD
type: SiteQuality
SIO_000300: 1.454e1

MQ
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 8.42e-1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51336299524804e-5
allele num: 66078
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.437e0

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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MQ
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BaseQRankSum
type: SiteQuality
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MQRankSum
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DP
type: SiteQuality
SIO_000300: 2.311513e6

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
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allele frequency: 1.218175173589962e-4
allele num: 16418
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.505978735580254e-5
allele num: 66402
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
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SIO_000300: -2.822e0

InbreedingCoeff
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SIO_000300: 6.2e-3

ClippingRankSum
type: SiteQuality
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VQSLOD
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MQRankSum
type: SiteQuality
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QD
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MQ
type: SiteQuality
SIO_000300: 5.792e1

FS
type: SiteQuality
SIO_000300: 1.941e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.57e-1

DP
type: SiteQuality
SIO_000300: 2.323589e6

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66486
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.839e0

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -8.016e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

DP
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FS
type: SiteQuality
SIO_000300: 1.689e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.84e-1

MQ
type: SiteQuality
SIO_000300: 5.65e1

QD
type: SiteQuality
SIO_000300: 1.457e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66530
num of homozygotes: 0

South Asian
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allele frequency: 6.079766536964981e-5
allele num: 16448
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.2e-1

DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.542999999999999e0

MQ
type: SiteQuality
SIO_000300: 5.932e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.561e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.48e0

ReadPosRankSum
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SIO_000300: 1.24e0

VQSLOD
type: SiteQuality
SIO_000300: -4.938e-1

QD
type: SiteQuality
SIO_000300: 1.387e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.2e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10298
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503036132988637e-5
allele num: 66532
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 1.34e-2

MQ
type: SiteQuality
SIO_000300: 5.798e1

BaseQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.6e-1

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

VQSLOD
type: SiteQuality
SIO_000300: -1.803e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.35e-2

MQ
type: SiteQuality
SIO_000300: 5.866e1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.084e0

ReadPosRankSum
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SIO_000300: -1.067e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.375e0

VQSLOD
type: SiteQuality
SIO_000300: -1.444e0

MQRankSum
type: SiteQuality
SIO_000300: -3.89e-1

DP
type: SiteQuality
SIO_000300: 2.330021e6

QD
type: SiteQuality
SIO_000300: 1.154e1

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.643201542912247e-5
allele num: 10370
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-2

FS
type: SiteQuality
SIO_000300: 1.258e0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.33e0

QD
type: SiteQuality
SIO_000300: 1.311e1

MQ
type: SiteQuality
SIO_000300: 5.851e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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East Asian
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African
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allele frequency: 9.633911368015414e-5
allele num: 10380
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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MQ
type: SiteQuality
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FS
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MQRankSum
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VQSLOD
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QD
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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allele frequency: 9.63020030816641e-5
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.09e-1

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 4.498155756139982e-5
allele num: 66694
num of homozygotes: 0

Latino
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African
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Other
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East Asian
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allele num: 8654
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European (Finnish)
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South Asian
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ReadPosRankSum
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
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InbreedingCoeff
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QD
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FS
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MQRankSum
type: SiteQuality
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ClippingRankSum
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DP
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

South Asian
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Other
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East Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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African
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FS
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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QD
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DP
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InbreedingCoeff
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MQ
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SIO_000300: 5.847e1

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 22
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10394
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

South Asian
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allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

MQRankSum
type: SiteQuality
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VQSLOD
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QD
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 7.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.331835e6

MQ
type: SiteQuality
SIO_000300: 5.982e1

ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 5.23e-1

ReadPosRankSum
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SIO_000300: -2.2e-1

DP
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MQ
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 42

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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East Asian
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allele frequency: 4.853247053385717e-3
allele num: 8654
num of homozygotes: 0

ReadPosRankSum
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BaseQRankSum
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QD
type: SiteQuality
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VQSLOD
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DP
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
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SIO_000300: 1.203e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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MQRankSum
type: SiteQuality
SIO_000300: 3.05e-1

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.549e1

FS
type: SiteQuality
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ReadPosRankSum
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DP
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.107e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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African
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allele frequency: 0.0e0
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South Asian
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Latino
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allele num: 11578
num of homozygotes: 0

East Asian
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Other
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FS
type: SiteQuality
SIO_000300: 5.3e-1

QD
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.507e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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ReadPosRankSum
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InbreedingCoeff
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FS
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VQSLOD
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QD
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MQ
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MQRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66738
num of homozygotes: 0

Other
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Latino
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European (Finnish)
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African
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South Asian
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East Asian
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QD
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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FS
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VQSLOD
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ClippingRankSum
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DP
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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Latino
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European (Non-Finnish)
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African
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allele num: 10400
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Other
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East Asian
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ReadPosRankSum
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MQRankSum
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QD
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BaseQRankSum
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MQ
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InbreedingCoeff
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FS
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DP
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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European (Non-Finnish)
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African
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Other
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East Asian
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Latino
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MQRankSum
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VQSLOD
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ClippingRankSum
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FS
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MQ
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InbreedingCoeff
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BaseQRankSum
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DP
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66736
num of homozygotes: 0

African
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European (Finnish)
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Latino
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East Asian
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South Asian
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Other
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allele frequency: 0.0e0
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MQRankSum
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SIO_000300: -4.7e-2

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.588e1

FS
type: SiteQuality
SIO_000300: 7.35e-1

BaseQRankSum
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SIO_000300: -3.497e0

QD
type: SiteQuality
SIO_000300: 1.316e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.85e-1

DP
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SIO_000300: 2.332118e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.88e0

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.331e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.13e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.519e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.74e-1

DP
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SIO_000300: 2.332215e6

MQ
type: SiteQuality
SIO_000300: 5.599e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -9.28e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.55e0

FS
type: SiteQuality
SIO_000300: 1.189e0

DP
type: SiteQuality
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QD
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.502e1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Other
type: Population
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allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 3.0e-4

BaseQRankSum
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VQSLOD
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SIO_000300: -1.304e0

MQRankSum
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.686e1

DP
type: SiteQuality
SIO_000300: 2.33222e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.4e-2

QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997242536866083e-5
allele num: 66728
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.69e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.61e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-2

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.0353e1

DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 11

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 11
allele frequency: 1.648681055155875e-4
allele num: 66720
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10382
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.615e-1

MQ
type: SiteQuality
SIO_000300: 5.485e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.159999999999999e-1

FS
type: SiteQuality
SIO_000300: 6.94e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.392e0

QD
type: SiteQuality
SIO_000300: 1.234e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.123e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.635767970707265e-5
allele num: 10378
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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FS
type: SiteQuality
SIO_000300: 1.809e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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MQ
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8650
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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Other
type: Population
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allele frequency: 0.0e0
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African
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South Asian
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11572
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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FS
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InbreedingCoeff
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DP
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ClippingRankSum
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MQRankSum
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66692
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Latino
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East Asian
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African
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Other
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European (Finnish)
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South Asian
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ReadPosRankSum
type: SiteQuality
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DP
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FS
type: SiteQuality
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InbreedingCoeff
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MQ
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BaseQRankSum
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ClippingRankSum
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QD
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VQSLOD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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Latino
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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FS
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MQRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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East Asian
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African
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Latino
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allele frequency: 3.456619426201175e-4
allele num: 11572
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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South Asian
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BaseQRankSum
type: SiteQuality
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DP
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VQSLOD
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ClippingRankSum
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FS
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MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.802e1

QD
type: SiteQuality
SIO_000300: 1.675e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2864
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2223
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4440
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

DP
type: SiteQuality
SIO_000300: 2.328633e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.6e0

MQ
type: SiteQuality
SIO_000300: 5.802e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.508e0

QD
type: SiteQuality
SIO_000300: 1.675e1

FS
type: SiteQuality
SIO_000300: 4.288e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
all individuals: 269
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17988
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4710
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2221
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16525
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.078288353999514e-5
allele num: 16452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.379e0

MQ
type: SiteQuality
SIO_000300: 5.932e1

VQSLOD
type: SiteQuality
SIO_000300: -2.506e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-1

QD
type: SiteQuality
SIO_000300: 1.361e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

FS
type: SiteQuality
SIO_000300: 7.151e0

DP
type: SiteQuality
SIO_000300: 2.318559e6