10-71124680-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71124680
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71124680
    reference: chr 10
allele count: 10
allele frequency: 8.244566830458728e-5
allele num: 121292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.721+22C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.495+22C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.492+22C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.600+22C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.507+22C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.499+22C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.459+22C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.492+22C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12426
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8782
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4037
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4373
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

10-71124681-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71124681
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71124681
    reference: chr 10
allele count: 19
allele frequency: 1.566441868517816e-4
allele num: 121294
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.459+23G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.721+23G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.492+23G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.507+23G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.499+23G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.492+23G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.600+23G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.495+23G>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8769
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4037
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4183
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12386
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4358
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6788
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5027
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/10-71124689-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71124689
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71124689
    reference: chr 10
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.507+31C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.721+31C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.459+31C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.499+31C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.492+31C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.492+31C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.495+31C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.600+31C>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8726
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6199
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4036
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4173
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4309
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6668
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

10-71124694-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71124694
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71124694
    reference: chr 10
allele count: 8
allele frequency: 6.598046978094485e-5
allele num: 121248
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.600+36G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.507+36G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.499+36G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.492+36G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.495+36G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.721+36G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.492+36G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.459+36G>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8656
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6184
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4036
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11707
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4172
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11427
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3439
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4846
  bin: 7.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-71124698-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71124698
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71124698
    reference: chr 10
allele count: 6
allele frequency: 4.949841605068638e-5
allele num: 121216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.499+40C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.600+40C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.507+40C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.492+40C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.492+40C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.459+40C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.495+40C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.721+40C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4167
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11422
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4036
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4769
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6062
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

10-71124699-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71124699
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71124699
    reference: chr 10
allele count: 4
allele frequency: 3.30016665841625e-5
allele num: 121206
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.492+41G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.459+41G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.499+41G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.721+41G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.507+41G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.600+41G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.492+41G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.495+41G>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4036
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6157
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10379
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11276
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8572
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4155
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3424
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2891
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP

10-71124699-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71124699
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71124699
    reference: chr 10
allele count: 1
allele frequency: 8.250416646040625e-6
allele num: 121206
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.459+41G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.507+41G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.495+41G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.499+41G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.492+41G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.600+41G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.721+41G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.492+41G>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11276
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8572
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4036
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6157
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10818
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 930
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22323
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

10-71124705-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71124705
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71124704
    reference: chr 10
allele count: 4
allele frequency: 3.300929211573058e-5
allele num: 121178
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.459+51delA
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.600+51delA
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.721+51delA
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.492+51delA
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.492+51delA
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.499+51delA
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.507+51delA
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.495+51delA
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8482
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9294
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6131
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10617
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4202
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 879
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4671
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: GA
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP

10-71124710-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71124710
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71124710
    reference: chr 10
allele count: 1
allele frequency: 8.261049153242462e-6
allele num: 121050
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.507+52G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.600+52G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.492+52G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.721+52G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.492+52G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.499+52G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.495+52G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.459+52G>C
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4141
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4197
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2249
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22318
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/10-71128254-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128254
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128254
    reference: chr 10
allele count: 7
allele frequency: 5.80248346292213e-5
allele num: 120638
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.500-38C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.508-38C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.493-38C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.460-38C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.496-38C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.493-38C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.722-38C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.601-38C>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19783
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6957
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 690
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS

http://identifiers.org/exac.variant/10-71128256-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128256
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128256
    reference: chr 10
allele count: 4
allele frequency: 3.315320094155091e-5
allele num: 120652
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.722-36C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.493-36C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.508-36C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.601-36C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.460-36C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.493-36C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.500-36C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.496-36C>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20048
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1209
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6837
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff

10-71128256-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128256
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128256
    reference: chr 10
allele count: 1
allele frequency: 8.288300235387727e-6
allele num: 120652
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.508-36C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.500-36C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.493-36C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.493-36C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.601-36C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.496-36C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.460-36C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.722-36C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20048
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7029
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1209
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1980
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6837
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

10-71128261-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128261
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128260
    reference: chr 10
allele count: 1
allele frequency: 8.274994621253496e-6
allele num: 120846
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.508-30delT
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.496-30delT
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.601-30delT
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.493-30delT
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.722-30delT
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.460-30delT
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.500-30delT
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.493-30delT
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2070
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9069
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: CT
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

10-71128262-T-TCATCCAGCCCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128262
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128273
    reference: chr 10
allele count: 1
allele frequency: 8.271982794275789e-6
allele num: 120890
alternate allele: TCATCCAGCCCC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20777
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7130
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9068
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1978
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

10-71128275-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128275
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128275
    reference: chr 10
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.500-17T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.722-17T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.460-17T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.496-17T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.601-17T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.508-17T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.493-17T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.493-17T>C
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21751
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20187
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2087
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7002
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

10-71128278-ATTC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128278
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128275
    reference: chr 10
allele count: 7
allele frequency: 5.772338951743246e-5
allele num: 121268
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.722-8_722-6delCTT
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.493-8_493-6delCTT
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.496-8_496-6delCTT
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.493-8_493-6delCTT
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.460-8_460-6delCTT
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.500-8_500-6delCTT
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.508-8_508-6delCTT
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.601-8_601-6delCTT
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20217
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21868
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7231
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7002
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9074
  bin: 9.75e1
  variant carriers: 7
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: ATTC
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD

10-71128284-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128284
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128284
    reference: chr 10
allele count: 2
allele frequency: 1.648641519388024e-5
allele num: 121312
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.722-8C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.460-8C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.493-8C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.496-8C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.493-8C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.500-8C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.508-8C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.601-8C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21953
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7019
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
hgvs: c.508-8C>T
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

10-71128286-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128286
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128286
    reference: chr 10
allele count: 2
allele frequency: 1.648478454386601e-5
allele num: 121324
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.496-6T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.500-6T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.493-6T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.508-6T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.601-6T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.493-6T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.722-6T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.460-6T>C
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20281
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9070
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38054
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2083
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: c.508-6T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

10-71128296-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128296
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128296
    reference: chr 10
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.512T>A
  hgvsp: ENSP00000384774.2:p.Ile171Asn
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.464T>A
  hgvsp: ENSP00000353433.2:p.Ile155Asn
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.497T>A
  hgvsp: ENSP00000415949.1:p.Ile166Asn
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.500T>A
  hgvsp: ENSP00000352398.6:p.Ile167Asn
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.504T>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.497T>A
  hgvsp: ENSP00000298649.3:p.Ile166Asn
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.605T>A
  hgvsp: ENSP00000402103.2:p.Ile202Asn
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.726T>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7265
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1183
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile171Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/10-71128312-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128312
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128312
    reference: chr 10
allele count: 2
allele frequency: 1.647500741375333e-5
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.513A>C
  hgvsp: ENST00000298649.3:c.513A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.528A>C
  hgvsp: ENST00000404387.2:c.528A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.516A>C
  hgvsp: ENST00000359426.6:c.516A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.742A>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.621A>C
  hgvsp: ENST00000448642.2:c.621A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.513A>C
  hgvsp: ENST00000436817.1:c.513A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.520A>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.480A>C
  hgvsp: ENST00000360289.2:c.480A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20149
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr176Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

10-71128317-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128317
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128317
    reference: chr 10
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.525G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.518G>A
  hgvsp: ENSP00000298649.3:p.Arg173Gln
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.747G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.518G>A
  hgvsp: ENSP00000415949.1:p.Arg173Gln
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.521G>A
  hgvsp: ENSP00000352398.6:p.Arg174Gln
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.533G>A
  hgvsp: ENSP00000384774.2:p.Arg178Gln
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.485G>A
  hgvsp: ENSP00000353433.2:p.Arg162Gln
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.626G>A
  hgvsp: ENSP00000402103.2:p.Arg209Gln
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20146
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7051
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg178Gln
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

10-71128326-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128326
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128326
    reference: chr 10
allele count: 9
allele frequency: 7.413509060955519e-5
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.527C>T
  hgvsp: ENSP00000298649.3:p.Ala176Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.530C>T
  hgvsp: ENSP00000352398.6:p.Ala177Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.635C>T
  hgvsp: ENSP00000402103.2:p.Ala212Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.756C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.494C>T
  hgvsp: ENSP00000353433.2:p.Ala165Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.527C>T
  hgvsp: ENSP00000415949.1:p.Ala176Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.534C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.542C>T
  hgvsp: ENSP00000384774.2:p.Ala181Val
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7278
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38238
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7052
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1973
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala181Val
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD

10-71128327-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128327
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128327
    reference: chr 10
allele count: 5
allele frequency: 4.118751853438334e-5
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.528G>A
  hgvsp: ENST00000436817.1:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.543G>A
  hgvsp: ENST00000404387.2:c.543G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.495G>A
  hgvsp: ENST00000360289.2:c.495G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.535G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.757G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.531G>A
  hgvsp: ENST00000359426.6:c.531G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.528G>A
  hgvsp: ENST00000298649.3:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.636G>A
  hgvsp: ENST00000448642.2:c.636G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38246
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9071
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala181Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

10-71128330-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128330
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128330
    reference: chr 10
allele count: 71
allele frequency: 5.848627631882434e-4
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.531C>T
  hgvsp: ENST00000298649.3:c.531C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.531C>T
  hgvsp: ENST00000436817.1:c.531C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.639C>T
  hgvsp: ENST00000448642.2:c.639C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.498C>T
  hgvsp: ENST00000360289.2:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.534C>T
  hgvsp: ENST00000359426.6:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.546C>T
  hgvsp: ENST00000404387.2:c.546C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.538C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.760C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7272
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22232
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 9.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser182Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum

10-71128336-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128336
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128336
    reference: chr 10
allele count: 2
allele frequency: 1.647500741375333e-5
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.552G>A
  hgvsp: ENST00000404387.2:c.552G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.645G>A
  hgvsp: ENST00000448642.2:c.645G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.766G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.504G>A
  hgvsp: ENST00000360289.2:c.504G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.537G>A
  hgvsp: ENST00000436817.1:c.537G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.540G>A
  hgvsp: ENST00000359426.6:c.540G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.537G>A
  hgvsp: ENST00000298649.3:c.537G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.544G>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22264
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val184Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

10-71128344-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128344
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128344
    reference: chr 10
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.548C>T
  hgvsp: ENSP00000352398.6:p.Ala183Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.552C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.545C>T
  hgvsp: ENSP00000298649.3:p.Ala182Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.512C>T
  hgvsp: ENSP00000353433.2:p.Ala171Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.560C>T
  hgvsp: ENSP00000384774.2:p.Ala187Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.653C>T
  hgvsp: ENSP00000402103.2:p.Ala218Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.545C>T
  hgvsp: ENSP00000415949.1:p.Ala182Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.774C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9048
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala187Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

10-71128358-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128358
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128358
    reference: chr 10
allele count: 1
allele frequency: 8.240083060037246e-6
allele num: 121358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.788C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.566C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.667C>T
  hgvsp: ENST00000448642.2:c.667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.562C>T
  hgvsp: ENST00000359426.6:c.562C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.574C>T
  hgvsp: ENST00000404387.2:c.574C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.526C>T
  hgvsp: ENST00000360289.2:c.526C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.559C>T
  hgvsp: ENST00000298649.3:c.559C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.559C>T
  hgvsp: ENST00000436817.1:c.559C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7291
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22291
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38206
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9047
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1964
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu192Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

10-71128362-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128362
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128362
    reference: chr 10
allele count: 1
allele frequency: 8.241033755274261e-6
allele num: 121344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.566T>A
  hgvsp: ENSP00000352398.6:p.Leu189His
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.563T>A
  hgvsp: ENSP00000298649.3:p.Leu188His
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.570T>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.578T>A
  hgvsp: ENSP00000384774.2:p.Leu193His
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.563T>A
  hgvsp: ENSP00000415949.1:p.Leu188His
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.792T>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.671T>A
  hgvsp: ENSP00000402103.2:p.Leu224His
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.530T>A
  hgvsp: ENSP00000353433.2:p.Leu177His
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9047
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu193His
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-71128366-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128366
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128366
    reference: chr 10
allele count: 14
allele frequency: 1.154334526145677e-4
allele num: 121282
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.582C>T
  hgvsp: ENST00000404387.2:c.582C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.567C>T
  hgvsp: ENST00000436817.1:c.567C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.534C>T
  hgvsp: ENST00000360289.2:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.796C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.567C>T
  hgvsp: ENST00000298649.3:c.567C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.570C>T
  hgvsp: ENST00000359426.6:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.675C>T
  hgvsp: ENST00000448642.2:c.675C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.574C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22276
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7024
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38017
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn194Asn
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD

10-71128367-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128367
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128367
    reference: chr 10
allele count: 1
allele frequency: 8.246062505153789e-6
allele num: 121270
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.568A>G
  hgvsp: ENSP00000415949.1:p.Lys190Glu
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.568A>G
  hgvsp: ENSP00000298649.3:p.Lys190Glu
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.583A>G
  hgvsp: ENSP00000384774.2:p.Lys195Glu
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.797A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.535A>G
  hgvsp: ENSP00000353433.2:p.Lys179Glu
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.571A>G
  hgvsp: ENSP00000352398.6:p.Lys191Glu
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.575A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.676A>G
  hgvsp: ENSP00000402103.2:p.Lys226Glu
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22289
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19862
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Lys195Glu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

10-71128374-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128374
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128374
    reference: chr 10
allele count: 1
allele frequency: 8.251914444151043e-6
allele num: 121184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.542T>A
  hgvsp: ENSP00000353433.2:p.Ile181Asn
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.578T>A
  hgvsp: ENSP00000352398.6:p.Ile193Asn
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.582T>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.575T>A
  hgvsp: ENSP00000415949.1:p.Ile192Asn
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.575T>A
  hgvsp: ENSP00000298649.3:p.Ile192Asn
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.683T>A
  hgvsp: ENSP00000402103.2:p.Ile228Asn
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.590T>A
  hgvsp: ENSP00000384774.2:p.Ile197Asn
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.804T>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6999
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1954
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile197Asn
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

10-71128377-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128377
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128377
    reference: chr 10
allele count: 1
allele frequency: 8.256138438929344e-6
allele num: 121122
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.578A>G
  hgvsp: ENSP00000298649.3:p.Lys193Arg
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.807A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.545A>G
  hgvsp: ENSP00000353433.2:p.Lys182Arg
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.686A>G
  hgvsp: ENSP00000402103.2:p.Lys229Arg
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.593A>G
  hgvsp: ENSP00000384774.2:p.Lys198Arg
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.581A>G
  hgvsp: ENSP00000352398.6:p.Lys194Arg
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.585A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.578A>G
  hgvsp: ENSP00000415949.1:p.Lys193Arg
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Lys198Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

10-71128385-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128385
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128385
    reference: chr 10
allele count: 1
allele frequency: 8.277597510098669e-6
allele num: 120808
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.586G>C
  hgvsp: ENSP00000415949.1:p.Gly196Arg
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.586G>C
  hgvsp: ENSP00000298649.3:p.Gly196Arg
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.815G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.553G>C
  hgvsp: ENSP00000353433.2:p.Gly185Arg
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.589G>C
  hgvsp: ENSP00000352398.6:p.Gly197Arg
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.694G>C
  hgvsp: ENSP00000402103.2:p.Gly232Arg
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.601G>C
  hgvsp: ENSP00000384774.2:p.Gly201Arg
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.593G>C
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7289
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36796
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9042
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly201Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/10-71128395-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128395
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128395
    reference: chr 10
allele count: 1
allele frequency: 8.33541718763024e-6
allele num: 119970
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.696+8C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.817+8C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.588+8C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.591+8C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.555+8C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.595+8C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.588+8C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.603+8C>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3029
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7114
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32341
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2000
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9040
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 704
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 5.25e1
  variant carriers: 0
hgvs: c.603+8C>A
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-71128400-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128400
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128400
    reference: chr 10
allele count: 1
allele frequency: 8.352683717278361e-6
allele num: 119722
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.817+13G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.603+13G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.588+13G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.588+13G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.696+13G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.591+13G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.595+13G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.555+13G>C
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6869
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20399
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 565
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1297
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1019
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/10-71128410-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128410
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128410
    reference: chr 10
allele count: 1
allele frequency: 8.388135820695209e-6
allele num: 119216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.817+23C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.588+23C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.588+23C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.595+23C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.696+23C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.591+23C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.555+23C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.603+23C>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6551
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1884
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3741
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6348
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27832
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4382
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1903
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ

10-71128411-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128411
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128411
    reference: chr 10
allele count: 1
allele frequency: 8.39560070523046e-6
allele num: 119110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.817+24C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.555+24C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.595+24C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.591+24C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.588+24C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.588+24C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.603+24C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.696+24C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4512
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1967
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4727
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9031
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1638
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26104
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

10-71128420-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128420
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128420
    reference: chr 10
allele count: 7
allele frequency: 5.909267419676172e-5
allele num: 118458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.588+33G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.588+33G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.555+33G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.595+33G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.817+33G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.591+33G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.603+33G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.696+33G>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10260
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9112
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8892
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14650
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2988
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4803
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4604
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5869
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

10-71128425-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128425
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128425
    reference: chr 10
allele count: 1
allele frequency: 8.478887569950822e-6
allele num: 117940
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.817+38G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.591+38G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.603+38G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.588+38G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.588+38G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.555+38G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.595+38G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.696+38G>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12933
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9523
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5092
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6191
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1970
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

10-71128432-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128432
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128432
    reference: chr 10
allele count: 1
allele frequency: 8.567511994516792e-6
allele num: 116720
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.591+45G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.603+45G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.595+45G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.817+45G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.588+45G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.696+45G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.588+45G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.555+45G>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14751
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10158
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9455
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6305
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10763
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3050
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3638
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6369
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

10-71128947-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128947
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128947
    reference: chr 10
allele count: 1
allele frequency: 8.597713008339781e-6
allele num: 116310
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.589-46G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.596-46G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.604-46G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.589-46G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.592-46G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.556-46G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.697-46G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.818-46G>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10690
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8744
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4470
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2674
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1029
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2828
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2625
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

10-71128950-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128950
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128950
    reference: chr 10
allele count: 2
allele frequency: 1.717829350832288e-5
allele num: 116426
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.604-43C>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.596-43C>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.592-43C>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.589-43C>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.556-43C>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.589-43C>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.818-43C>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.697-43C>G
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7919
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17326
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3426
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2720
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1058
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4654
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

10-71128950-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128950
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128950
    reference: chr 10
allele count: 3
allele frequency: 2.576744026248433e-5
allele num: 116426
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.556-43C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.818-43C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.589-43C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.596-43C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.589-43C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.592-43C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.697-43C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.604-43C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7919
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1799
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1775
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14105
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1984
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1058
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1697
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

10-71128957-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128957
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128957
    reference: chr 10
allele count: 1
allele frequency: 8.554759012438619e-6
allele num: 116894
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.697-36G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.589-36G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.604-36G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.556-36G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.592-36G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.818-36G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.596-36G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.589-36G>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6939
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7836
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1672
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5132
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1967
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3189
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

10-71128958-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128958
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128958
    reference: chr 10
allele count: 1
allele frequency: 8.552564058704799e-6
allele num: 116924
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.592-35T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.589-35T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.604-35T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.818-35T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.589-35T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.556-35T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.697-35T>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.596-35T>C
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6685
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4040
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21789
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2061
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1337
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1128
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2549
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2901
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1523
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13694
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 923
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

10-71128963-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128963
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128963
    reference: chr 10
allele count: 2
allele frequency: 1.706106153924897e-5
allele num: 117226
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.818-30G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.592-30G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.556-30G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.697-30G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.589-30G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.596-30G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.604-30G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.589-30G>C
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5438
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8701
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4410
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13720
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1372
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2413
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ

10-71128968-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128968
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128968
    reference: chr 10
allele count: 5
allele frequency: 4.244986670741854e-5
allele num: 117786
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.589-25A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.592-25A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.556-25A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.697-25A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.596-25A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.604-25A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.589-25A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.818-25A>G
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4714
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9283
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13763
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/10-71128972-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128972
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128972
    reference: chr 10
allele count: 1
allele frequency: 8.462814393554721e-6
allele num: 118164
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.556-21C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.818-21C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.592-21C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.596-21C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.589-21C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.589-21C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.604-21C>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.697-21C>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25345
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1841
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6064
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1518
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD

10-71128977-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128977
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128977
    reference: chr 10
allele count: 5
allele frequency: 4.208683355499066e-5
allele num: 118802
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.589-16C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.589-16C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.818-16C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.592-16C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.697-16C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.556-16C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.604-16C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.596-16C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26039
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13837
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2817
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP

10-71128978-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128978
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128978
    reference: chr 10
allele count: 3
allele frequency: 2.519780275160006e-5
allele num: 119058
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.604-15G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.556-15G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.592-15G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.697-15G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.596-15G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.589-15G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.818-15G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.589-15G>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2000
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1905
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3651
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

10-71128983-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128983
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128983
    reference: chr 10
allele count: 6
allele frequency: 5.008430858611997e-5
allele num: 119798
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.697-10C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.604-10C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.589-10C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.818-10C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.592-10C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.596-10C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.589-10C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.556-10C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5719
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13914
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2935
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

10-71128990-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128990
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128990
    reference: chr 10
allele count: 1
allele frequency: 8.294074713025015e-6
allele num: 120568
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.556-3C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.604-3C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.818-3C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.589-3C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.697-3C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.592-3C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.589-3C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.596-3C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6089
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11398
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3934
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25536
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 3.25e1
  variant carriers: 0
hgvs: c.604-3C>T
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

10-71128997-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71128997
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71128997
    reference: chr 10
allele count: 1
allele frequency: 8.270204108637402e-6
allele num: 120916
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.593A>G
  hgvsp: ENSP00000415949.1:p.Tyr198Cys
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.593A>G
  hgvsp: ENSP00000298649.3:p.Tyr198Cys
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.701A>G
  hgvsp: ENSP00000402103.2:p.Tyr234Cys
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.608A>G
  hgvsp: ENSP00000384774.2:p.Tyr203Cys
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.560A>G
  hgvsp: ENSP00000353433.2:p.Tyr187Cys
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.822A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.596A>G
  hgvsp: ENSP00000352398.6:p.Tyr199Cys
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.600A>G
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1193
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25778
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14011
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Tyr203Cys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

10-71129007-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129007
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129007
    reference: chr 10
allele count: 2
allele frequency: 1.650083329208125e-5
allele num: 121206
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.832C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.570C>T
  hgvsp: ENST00000360289.2:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.618C>T
  hgvsp: ENST00000404387.2:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.603C>T
  hgvsp: ENST00000436817.1:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.610C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.606C>T
  hgvsp: ENST00000359426.6:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.711C>T
  hgvsp: ENST00000448642.2:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.603C>T
  hgvsp: ENST00000298649.3:c.603C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6400
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3105
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25930
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4073
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3197
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asn206Asn
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ

10-71129008-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129008
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129008
    reference: chr 10
allele count: 4
allele frequency: 3.299731071917638e-5
allele num: 121222
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.619A>G
  hgvsp: ENSP00000384774.2:p.Ile207Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.571A>G
  hgvsp: ENSP00000353433.2:p.Ile191Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.611A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.604A>G
  hgvsp: ENSP00000415949.1:p.Ile202Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.604A>G
  hgvsp: ENSP00000298649.3:p.Ile202Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.712A>G
  hgvsp: ENSP00000402103.2:p.Ile238Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.833A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.607A>G
  hgvsp: ENSP00000352398.6:p.Ile203Val
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11777
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6404
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3196
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile207Val
num of homozygotes: 1
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD

10-71129010-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129010
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129010
    reference: chr 10
allele count: 3
allele frequency: 2.474308430793593e-5
allele num: 121246
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.606C>T
  hgvsp: ENST00000436817.1:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.621C>T
  hgvsp: ENST00000404387.2:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.609C>T
  hgvsp: ENST00000359426.6:c.609C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.613C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.714C>T
  hgvsp: ENST00000448642.2:c.714C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.573C>T
  hgvsp: ENST00000360289.2:c.573C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.606C>T
  hgvsp: ENST00000298649.3:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.835C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2190
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile207Ile
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

10-71129011-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129011
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129011
    reference: chr 10
allele count: 2
allele frequency: 1.649185302460584e-5
allele num: 121272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.614G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.610G>A
  hgvsp: ENSP00000352398.6:p.Val204Ile
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.607G>A
  hgvsp: ENSP00000415949.1:p.Val203Ile
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.607G>A
  hgvsp: ENSP00000298649.3:p.Val203Ile
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.715G>A
  hgvsp: ENSP00000402103.2:p.Val239Ile
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.622G>A
  hgvsp: ENSP00000384774.2:p.Val208Ile
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.836G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.574G>A
  hgvsp: ENSP00000353433.2:p.Val192Ile
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6453
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25933
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3108
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val208Ile
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

10-71129019-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129019
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129019
    reference: chr 10
allele count: 4
allele frequency: 3.296522169111587e-5
allele num: 121340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.844G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.615G>T
  hgvsp: ENST00000436817.1:c.615G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.618G>T
  hgvsp: ENST00000359426.6:c.618G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.615G>T
  hgvsp: ENST00000298649.3:c.615G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.582G>T
  hgvsp: ENST00000360289.2:c.582G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.630G>T
  hgvsp: ENST00000404387.2:c.630G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.622G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.723G>T
  hgvsp: ENST00000448642.2:c.723G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7185
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val210Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/10-71129023-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129023
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129023
    reference: chr 10
allele count: 1
allele frequency: 8.240490473993011e-6
allele num: 121352
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.626A>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.586A>C
  hgvsp: ENSP00000353433.2:p.Asn196His
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.619A>C
  hgvsp: ENSP00000415949.1:p.Asn207His
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.848A>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.634A>C
  hgvsp: ENSP00000384774.2:p.Asn212His
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.727A>C
  hgvsp: ENSP00000402103.2:p.Asn243His
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.619A>C
  hgvsp: ENSP00000298649.3:p.Asn207His
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.622A>C
  hgvsp: ENSP00000352398.6:p.Asn208His
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11843
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1638
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1325
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asn212His
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

10-71129026-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129026
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129026
    reference: chr 10
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.622G>C
  hgvsp: ENSP00000415949.1:p.Asp208His
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.629G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.730G>C
  hgvsp: ENSP00000402103.2:p.Asp244His
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.637G>C
  hgvsp: ENSP00000384774.2:p.Asp213His
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.851G>C
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.589G>C
  hgvsp: ENSP00000353433.2:p.Asp197His
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.625G>C
  hgvsp: ENSP00000352398.6:p.Asp209His
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.622G>C
  hgvsp: ENSP00000298649.3:p.Asp208His
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27689
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2209
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6508
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3231
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25981
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp213His
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff

10-71129061-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129061
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129061
    reference: chr 10
allele count: 4
allele frequency: 3.295272930980509e-5
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.657C>T
  hgvsp: ENST00000298649.3:c.657C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.765C>T
  hgvsp: ENST00000448642.2:c.765C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.672C>T
  hgvsp: ENST00000404387.2:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.624C>T
  hgvsp: ENST00000360289.2:c.624C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.886C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.657C>T
  hgvsp: ENST00000436817.1:c.657C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.664C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.660C>T
  hgvsp: ENST00000359426.6:c.660C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6569
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7188
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4116
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3249
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp224Asp
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

10-71129062-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129062
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129062
    reference: chr 10
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.673G>T
  hgvsp: ENSP00000384774.2:p.Asp225Tyr
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.661G>T
  hgvsp: ENSP00000352398.6:p.Asp221Tyr
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.658G>T
  hgvsp: ENSP00000298649.3:p.Asp220Tyr
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.766G>T
  hgvsp: ENSP00000402103.2:p.Asp256Tyr
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.625G>T
  hgvsp: ENSP00000353433.2:p.Asp209Tyr
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.665G>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.658G>T
  hgvsp: ENSP00000415949.1:p.Asp220Tyr
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.887G>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14077
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3140
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25871
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp225Tyr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

10-71129067-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129067
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129067
    reference: chr 10
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.771G>A
  hgvsp: ENST00000448642.2:c.771G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.678G>A
  hgvsp: ENST00000404387.2:c.678G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.663G>A
  hgvsp: ENST00000298649.3:c.663G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.663G>A
  hgvsp: ENST00000436817.1:c.663G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.630G>A
  hgvsp: ENST00000360289.2:c.630G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.892G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.666G>A
  hgvsp: ENST00000359426.6:c.666G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.670G>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6577
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln226Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

10-71129080-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129080
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129080
    reference: chr 10
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.643G>A
  hgvsp: ENSP00000353433.2:p.Gly215Ser
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.683G>A
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.676G>A
  hgvsp: ENSP00000415949.1:p.Gly226Ser
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.784G>A
  hgvsp: ENSP00000402103.2:p.Gly262Ser
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.691G>A
  hgvsp: ENSP00000384774.2:p.Gly231Ser
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.679G>A
  hgvsp: ENSP00000352398.6:p.Gly227Ser
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.676G>A
  hgvsp: ENSP00000298649.3:p.Gly226Ser
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.905G>A
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27409
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1330
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3252
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3139
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly231Ser
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

10-71129089-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129089
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129089
    reference: chr 10
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.688A>G
  hgvsp: ENSP00000352398.6:p.Ile230Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.692A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.652A>G
  hgvsp: ENSP00000353433.2:p.Ile218Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.914A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.685A>G
  hgvsp: ENSP00000298649.3:p.Ile229Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.793A>G
  hgvsp: ENSP00000402103.2:p.Ile265Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.700A>G
  hgvsp: ENSP00000384774.2:p.Ile234Val
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.685A>G
  hgvsp: ENSP00000415949.1:p.Ile229Val
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7187
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11987
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4129
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7191
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile234Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum

10-71129091-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129091
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129091
    reference: chr 10
allele count: 2
allele frequency: 1.64766361299677e-5
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.702C>T
  hgvsp: ENST00000404387.2:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.687C>T
  hgvsp: ENST00000436817.1:c.687C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.687C>T
  hgvsp: ENST00000298649.3:c.687C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.795C>T
  hgvsp: ENST00000448642.2:c.795C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.916C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.654C>T
  hgvsp: ENST00000360289.2:c.654C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.690C>T
  hgvsp: ENST00000359426.6:c.690C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.694C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7188
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3254
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1333
  bin: 8.75e1
  variant carriers: 0
hgvs: c.702C>T
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP

10-71129105-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129105
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129105
    reference: chr 10
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.688+13C>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.703+13C>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.655+13C>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.691+13C>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.796+13C>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.695+13C>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.917+13C>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.688+13C>G
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7245
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4117
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1323
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7147
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

10-71129105-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129105
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129105
    reference: chr 10
allele count: 539
allele frequency: 4.440233956668589e-3
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.703+13C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.691+13C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.796+13C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.688+13C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.688+13C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.917+13C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.655+13C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.695+13C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 26907
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11916
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 3.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6618
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 6.25e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7245
  bin: 9.75e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 8.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 4.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 4.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 5.25e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1323
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 1
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

10-71129112-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129112
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129112
    reference: chr 10
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.703+20C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.688+20C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.695+20C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.688+20C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.691+20C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.655+20C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.796+20C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.917+20C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7240
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14509
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3283
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

10-71129114-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129114
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129114
    reference: chr 10
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.688+22A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.655+22A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.703+22A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.796+22A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.917+22A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.691+22A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.695+22A>G
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.688+22A>G
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7241
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26815
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1679
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4142
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

10-71129125-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 71129125
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 71129125
    reference: chr 10
allele count: 47
allele frequency: 3.87213709013017e-4
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000494253
  gene symbol: HK1
  hgvsc: ENST00000494253.1:n.917+33C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000298649
  ensembl transcript: ENST00000298649
  gene symbol: HK1
  hgvsc: ENST00000298649.3:c.688+33C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000384774
  ensembl transcript: ENST00000404387
  gene symbol: HK1
  hgvsc: ENST00000404387.2:c.703+33C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl transcript: ENST00000493591
  gene symbol: HK1
  hgvsc: ENST00000493591.1:n.695+33C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000402103
  ensembl transcript: ENST00000448642
  gene symbol: HK1
  hgvsc: ENST00000448642.2:c.796+33C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000353433
  ensembl transcript: ENST00000360289
  gene symbol: HK1
  hgvsc: ENST00000360289.2:c.655+33C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000415949
  ensembl transcript: ENST00000436817
  gene symbol: HK1
  hgvsc: ENST00000436817.1:c.688+33C>T
  variant of: http://identifiers.org/hgnc/4922
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156515
  ensembl protein: ENSP00000352398
  ensembl transcript: ENST00000359426
  gene symbol: HK1
  hgvsc: ENST00000359426.6:c.691+33C>T
  variant of: http://identifiers.org/hgnc/4922
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26703
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3471
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12556
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3130
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2013
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22402
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 97
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5037
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6815
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.818402230573403e-4
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.770340450086555e-4
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.696177e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.43e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

FS
type: SiteQuality
SIO_000300: 6.889999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.05e-1

QD
type: SiteQuality
SIO_000300: 1.18e1

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2012
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12493
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22386
bin: 9.75e1
variant carriers: 19

GenotypeQuality
all individuals: 3462
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3114
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 2.69889345368399e-4
allele num: 66694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.617234083477592e-5
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.376e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.02e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.9e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 2.694299e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.17e-1

GenotypeQuality
all individuals: 146
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22361
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3448
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3064
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2002
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12074
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4956
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e0

QD
type: SiteQuality
SIO_000300: 1.67e1

VQSLOD
type: SiteQuality
SIO_000300: -1.956e0

DP
type: SiteQuality
SIO_000300: 2.683846e6

MQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.253e0

FS
type: SiteQuality
SIO_000300: 3.018e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.900000000000001e-3

MQ
type: SiteQuality
SIO_000300: 5.837e1

GenotypeQuality
all individuals: 372
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6164
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22354
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 262
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1993
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2963
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4289
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 9.272137227630969e-4
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.945e0

MQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

DP
type: SiteQuality
SIO_000300: 2.670453e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.42e-1

GenotypeQuality
all individuals: 643
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1979
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3426
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2918
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4263
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11009
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22334
bin: 9.75e1
variant carriers: 6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66670
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.810467577448528e-4
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.662428e6

FS
type: SiteQuality
SIO_000300: 5.801e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.21e-1

QD
type: SiteQuality
SIO_000300: 1.18e1

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4239
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6015
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10818
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22323
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4740
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.925298421255295e-4
allele num: 10388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.513317191283293e-4
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.929e0

FS
type: SiteQuality
SIO_000300: 3.652e0

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

QD
type: SiteQuality
SIO_000300: 1.314e1

MQ
type: SiteQuality
SIO_000300: 5.95e1

DP
type: SiteQuality
SIO_000300: 2.658733e6

GenotypeQuality
all individuals: 6015
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2891
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4740
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3424
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1971
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4239
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500240038406145e-5
allele num: 66656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.929e0

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-2

FS
type: SiteQuality
SIO_000300: 3.652e0

DP
type: SiteQuality
SIO_000300: 2.658733e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.61e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

QD
type: SiteQuality
SIO_000300: 1.314e1

GenotypeQuality
all individuals: 8735
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22323
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5790
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1745
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3412
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2815
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1196
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.001140216641162e-5
allele num: 66654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-2

FS
type: SiteQuality
SIO_000300: 2.529e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.41e-1

QD
type: SiteQuality
SIO_000300: 1.223e1

VQSLOD
type: SiteQuality
SIO_000300: 2.53e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 2.643085e6

GenotypeQuality
all individuals: 5084
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2722
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2936
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3416
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4627
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6161
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1264
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162520344106022e-4
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66570
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.607e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.51e-1

QD
type: SiteQuality
SIO_000300: 1.254e1

DP
type: SiteQuality
SIO_000300: 2.633444e6

GenotypeQuality
all individuals: 1210
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33097
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9077
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2114
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6824
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1985
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.044044496698923e-5
allele num: 66342
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.082725060827251e-5
allele num: 16440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.32e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.6e-2

DP
type: SiteQuality
SIO_000300: 1.998062e6

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.676e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.56e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 1980
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 751
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.522840343735866e-5
allele num: 66330
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.08198515995621e-5
allele num: 16442
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.952e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.03e-1

FS
type: SiteQuality
SIO_000300: 3.103e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.83e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

QD
type: SiteQuality
SIO_000300: 1.461e1

DP
type: SiteQuality
SIO_000300: 2.005144e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

GenotypeQuality
all individuals: 620
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2089
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507613447911955e-5
allele num: 66330
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

DP
type: SiteQuality
SIO_000300: 2.005144e6

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

FS
type: SiteQuality
SIO_000300: 3.103e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.83e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-2

QD
type: SiteQuality
SIO_000300: 1.461e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.686587908269631e-5
allele num: 11512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

DP
type: SiteQuality
SIO_000300: 2.01912e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.21e-1

QD
type: SiteQuality
SIO_000300: 1.406e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.85e-1

MQ
type: SiteQuality
SIO_000300: 6.027e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 510
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504573904670197e-5
allele num: 66464
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.66e0

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 5.241e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.021289e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.601e0

MQRankSum
type: SiteQuality
SIO_000300: -3.642e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

GenotypeQuality
all individuals: 568
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1970
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variant carriers: 0

GenotypeQuality
all individuals: 67
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 106
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variant carriers: 0

GenotypeQuality
all individuals: 37599
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500600240096038e-5
allele num: 66640
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.54e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.93e0

DP
type: SiteQuality
SIO_000300: 2.040497e6

MQ
type: SiteQuality
SIO_000300: 5.92e1

FS
type: SiteQuality
SIO_000300: 5.59e0

MQRankSum
type: SiteQuality
SIO_000300: -1.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.43e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66678
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.243967503334546e-4
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 7.7e-1

DP
type: SiteQuality
SIO_000300: 2.042589e6

FS
type: SiteQuality
SIO_000300: 1.075e0

MQRankSum
type: SiteQuality
SIO_000300: -5.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQ
type: SiteQuality
SIO_000300: 5.81e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.92e-1

QD
type: SiteQuality
SIO_000300: 1.532e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998590662388677e-5
allele num: 66698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

DP
type: SiteQuality
SIO_000300: 2.044844e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.09e-1

QD
type: SiteQuality
SIO_000300: 1.269e1

MQ
type: SiteQuality
SIO_000300: 5.943e1

FS
type: SiteQuality
SIO_000300: 1.0344e1

VQSLOD
type: SiteQuality
SIO_000300: -1.357e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.281e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998590662388677e-5
allele num: 66698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.35e0

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 2.045e0

VQSLOD
type: SiteQuality
SIO_000300: -1.177e0

QD
type: SiteQuality
SIO_000300: 1.709e1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.045071e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.79e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
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allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
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European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.43e0

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -9.281e-1

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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SIO_000300: -1.591e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 38218
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7053
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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African
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allele frequency: 1.923076923076923e-4
allele num: 10400
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Latino
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allele frequency: 0.0e0
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QD
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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MQ
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ReadPosRankSum
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DP
type: SiteQuality
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GenotypeQuality
all individuals: 1975
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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East Asian
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Other
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VQSLOD
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SIO_000300: 1.28e0

InbreedingCoeff
type: SiteQuality
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MQRankSum
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DP
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BaseQRankSum
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QD
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ClippingRankSum
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ReadPosRankSum
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FS
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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allele frequency: 7.77336327517706e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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ReadPosRankSum
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SIO_000300: -3.16e-1

MQ
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ClippingRankSum
type: SiteQuality
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MQRankSum
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DP
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BaseQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 5
allele frequency: 7.49288176232579e-5
allele num: 66730
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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Other
type: Population
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MQ
type: SiteQuality
SIO_000300: 5.926e1

ReadPosRankSum
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QD
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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DP
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 8
allele frequency: 1.209555488358028e-3
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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allele num: 906
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South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
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num of homozygotes: 0

Latino
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allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 60
allele frequency: 8.991458114790948e-4
allele num: 66730
num of homozygotes: 0

East Asian
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InbreedingCoeff
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
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MQ
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ReadPosRankSum
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ClippingRankSum
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FS
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DP
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

European (Non-Finnish)
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allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
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Latino
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South Asian
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VQSLOD
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MQ
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QD
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FS
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66726
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East Asian
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num of homozygotes: 0

African
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Latino
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South Asian
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European (Finnish)
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allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Other
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ClippingRankSum
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DP
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FS
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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VQSLOD
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MQ
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QD
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
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num of homozygotes: 0

African
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East Asian
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allele num: 8654
num of homozygotes: 0

South Asian
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Latino
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66720
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Other
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FS
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QD
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BaseQRankSum
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MQ
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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South Asian
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European (Finnish)
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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East Asian
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MQRankSum
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QD
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MQ
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ClippingRankSum
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DP
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FS
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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allele frequency: 8.482792050412022e-4
allele num: 16504
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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African
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BaseQRankSum
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QD
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MQ
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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FS
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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African
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allele frequency: 9.637625289128758e-5
allele num: 10376
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Latino
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InbreedingCoeff
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DP
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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MQ
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FS
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VQSLOD
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Latino
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Other
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African
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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VQSLOD
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ClippingRankSum
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QD
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MQRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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allele frequency: 0.0e0
allele num: 904
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FS
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SIO_000300: 5.532e0

BaseQRankSum
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DP
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InbreedingCoeff
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MQRankSum
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QD
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66462
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Latino
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East Asian
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African
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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Other
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ReadPosRankSum
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InbreedingCoeff
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QD
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DP
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FS
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MQ
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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allele frequency: 9.821253191907288e-5
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European (Finnish)
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Latino
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East Asian
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Other
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European (Non-Finnish)
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BaseQRankSum
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FS
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ClippingRankSum
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MQ
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QD
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VQSLOD
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MQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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East Asian
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BaseQRankSum
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DP
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MQRankSum
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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QD
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InbreedingCoeff
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FS
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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East Asian
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South Asian
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African
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Latino
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Other
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MQRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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VQSLOD
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DP
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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East Asian
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VQSLOD
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MQRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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FS
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ClippingRankSum
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MQ
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 7

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9998
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.072764053209097e-4
allele num: 65252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

InbreedingCoeff
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FS
type: SiteQuality
SIO_000300: 4.395e0

MQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.413e0

DP
type: SiteQuality
SIO_000300: 1.838508e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.81e-1

QD
type: SiteQuality
SIO_000300: 1.231e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.537893700787402e-5
allele num: 65024
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8274
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11202
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.587e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.68e-1

DP
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SIO_000300: 1.795341e6

MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
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SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.21e-1

QD
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SIO_000300: 9.630000000000001e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.565435190983093e-4
allele num: 6388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11044
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16100
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

QD
type: SiteQuality
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DP
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SIO_000300: 1.754433e6

VQSLOD
type: SiteQuality
SIO_000300: 9.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.327512022272843e-5
allele num: 15804
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10862
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6332
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.684e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.14e-1

DP
type: SiteQuality
SIO_000300: 2.256309e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

QD
type: SiteQuality
SIO_000300: 1.027e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.59e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.11448860097172e-5
allele num: 64216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6338
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.459e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.93e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

MQRankSum
type: SiteQuality
SIO_000300: -3.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.84e-1

FS
type: SiteQuality
SIO_000300: 1.506e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.72e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6338
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15812
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64216
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.037052034824863e-4
allele num: 9878
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.84e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.87e-1

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.72e-1

DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10952
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64468
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6356
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South Asian
type: Population
allele count: 1
allele frequency: 6.300403225806451e-5
allele num: 15872
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.409999999999999e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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SIO_000300: -6.8e-1

MQ
type: SiteQuality
SIO_000300: 5.987e1

MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8454
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15870
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550579916888916e-5
allele num: 64492
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 10948
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Other
type: Population
allele count: 0
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allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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Latino
type: Population
allele count: 2
allele frequency: 1.821161901293025e-4
allele num: 10982
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64668
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9950
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 1.722e1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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FS
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DP
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5868
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2589
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.715423606082549e-4
allele num: 11048
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.538935056940597e-5
allele num: 64980
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.138952164009112e-3
allele num: 878
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10004
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15962
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.75e-1

FS
type: SiteQuality
SIO_000300: 6.63e0

QD
type: SiteQuality
SIO_000300: 1.683e1

DP
type: SiteQuality
SIO_000300: 2.377215e6

VQSLOD
type: SiteQuality
SIO_000300: 1.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13784
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 21954
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1321
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534260026389273e-5
allele num: 65178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11116
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10028
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16002
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.131e1

DP
type: SiteQuality
SIO_000300: 2.395758e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.21e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.139999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.9e-1

FS
type: SiteQuality
SIO_000300: 1.095e1

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: -6.844e-1

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1390
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2639
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.051571559353067e-5
allele num: 65540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11202
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.976781107362572e-4
allele num: 10078
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.0e0

QD
type: SiteQuality
SIO_000300: 1.454e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 5.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

FS
type: SiteQuality
SIO_000300: 7.62e-1

DP
type: SiteQuality
SIO_000300: 2.42302e6

GenotypeQuality
all individuals: 890
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 348
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 2693
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variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65676
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.482702577199907e-4
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16116
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

FS
type: SiteQuality
SIO_000300: 5.372e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-2

QD
type: SiteQuality
SIO_000300: 1.388e1

DP
type: SiteQuality
SIO_000300: 2.432545e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.13e-1

GenotypeQuality
all individuals: 1475
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25112
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variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2808
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variant carriers: 0

GenotypeQuality
all individuals: 349
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variant carriers: 0

GenotypeQuality
all individuals: 369
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 1194
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variant carriers: 0

GenotypeQuality
all individuals: 155
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GenotypeQuality
all individuals: 6703
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GenotypeQuality
all individuals: 3764
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variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66066
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6488
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.70004933399112e-4
allele num: 16216
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11324
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.06e-1

DP
type: SiteQuality
SIO_000300: 2.451743e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

FS
type: SiteQuality
SIO_000300: 7.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.555e0

QD
type: SiteQuality
SIO_000300: 1.215e1

VQSLOD
type: SiteQuality
SIO_000300: 3.05e0

MQ
type: SiteQuality
SIO_000300: 5.979e1

GenotypeQuality
all individuals: 118
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1251
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 187
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GenotypeQuality
all individuals: 1559
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variant carriers: 0

GenotypeQuality
all individuals: 482
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variant carriers: 0

GenotypeQuality
all individuals: 13984
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3062
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variant carriers: 0

GenotypeQuality
all individuals: 6900
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variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2967
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504890895410083e-5
allele num: 66450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: -2.197e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.75e-1

FS
type: SiteQuality
SIO_000300: 6.254e0

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

DP
type: SiteQuality
SIO_000300: 2.472427e6

MQ
type: SiteQuality
SIO_000300: 5.925e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.93e-1

GenotypeQuality
all individuals: 116
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
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variant carriers: 0

GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 74
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variant carriers: 0

GenotypeQuality
all individuals: 56
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 290
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GenotypeQuality
all individuals: 4027
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GenotypeQuality
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GenotypeQuality
all individuals: 7009
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GenotypeQuality
all individuals: 3135
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variant carriers: 0

GenotypeQuality
all individuals: 1285
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variant carriers: 0

GenotypeQuality
all individuals: 1595
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.09979260705136e-5
allele num: 16394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 3.82e0

MQ
type: SiteQuality
SIO_000300: 5.784e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.401e0

VQSLOD
type: SiteQuality
SIO_000300: -2.841e0

DP
type: SiteQuality
SIO_000300: 2.481367e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.41e0

MQRankSum
type: SiteQuality
SIO_000300: 2.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e0

QD
type: SiteQuality
SIO_000300: 1.318e1

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14042
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

FS
type: SiteQuality
SIO_000300: 8.388e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-2

DP
type: SiteQuality
SIO_000300: 2.488698e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.360000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.117e1

VQSLOD
type: SiteQuality
SIO_000300: -1.59e-2

MQ
type: SiteQuality
SIO_000300: 5.951e1

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4074
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.626492106276473e-5
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214329083181542e-4
allele num: 16470
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499610101373643e-5
allele num: 66684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.079e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.35e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.281e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.09e-1

DP
type: SiteQuality
SIO_000300: 2.489125e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.09e-1

FS
type: SiteQuality
SIO_000300: 4.524e0

QD
type: SiteQuality
SIO_000300: 1.515e1

GenotypeQuality
all individuals: 25933
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1312
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variant carriers: 0

GenotypeQuality
all individuals: 27
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GenotypeQuality
all individuals: 1629
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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allele frequency: 1.155802126675913e-4
allele num: 8652
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.998860433035446e-5
allele num: 66692
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DP
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MQ
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QD
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BaseQRankSum
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FS
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.068697657482704e-5
allele num: 16478
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Latino
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European (Non-Finnish)
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allele frequency: 1.49934029027228e-5
allele num: 66696
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Other
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DP
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BaseQRankSum
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MQ
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QD
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66718
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 3.843936190659235e-4
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East Asian
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Other
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Latino
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FS
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MQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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DP
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
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South Asian
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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MQ
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FS
type: SiteQuality
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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South Asian
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European (Finnish)
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East Asian
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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VQSLOD
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BaseQRankSum
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MQ
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FS
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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DP
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QD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele num: 8654
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South Asian
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European (Non-Finnish)
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African
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allele num: 10406
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Latino
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Other
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MQ
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FS
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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QD
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MQRankSum
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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European (Non-Finnish)
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allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

East Asian
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African
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Other
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South Asian
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MQRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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DP
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FS
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MQ
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ReadPosRankSum
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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African
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South Asian
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European (Finnish)
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East Asian
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Other
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DP
type: SiteQuality
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MQ
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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FS
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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Latino
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European (Non-Finnish)
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South Asian
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MQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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QD
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25714
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3258
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1332
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3149
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14087
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.59e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.376e0

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

QD
type: SiteQuality
SIO_000300: 1.291e1

DP
type: SiteQuality
SIO_000300: 2.49675e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.68e-1

GenotypeQuality
all individuals: 3149
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7190
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25672
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1653
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4129
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14088
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.398e1

MQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.99e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.497271e6

GenotypeQuality
all individuals: 25297
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14542
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1653
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3261
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3158
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.216e0

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.447e1

MQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

FS
type: SiteQuality
SIO_000300: 5.2e-1

DP
type: SiteQuality
SIO_000300: 2.524888e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e-1

GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14542
bin: 9.75e1
variant carriers: 537

GenotypeQuality
all individuals: 3261
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25297
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4117
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7147
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3158
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1653
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 27
allele frequency: 1.63576881134133e-3
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 54
allele frequency: 4.66724286949006e-3
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 1.537870049980777e-3
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 412
allele frequency: 6.173764497857164e-3
allele num: 66734
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 30
allele frequency: 4.535833081342607e-3
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.216e0

DP
type: SiteQuality
SIO_000300: 2.524888e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.447e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e-1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25225
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1338
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7163
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4132
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3181
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.536e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.01e0

MQRankSum
type: SiteQuality
SIO_000300: 2.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

DP
type: SiteQuality
SIO_000300: 2.522987e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e-1

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3182
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25220
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7167
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14513
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1342
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3290
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.069e0

QD
type: SiteQuality
SIO_000300: 1.39e1

FS
type: SiteQuality
SIO_000300: 2.295e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.395e0

MQRankSum
type: SiteQuality
SIO_000300: 1.31e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e0

DP
type: SiteQuality
SIO_000300: 2.523334e6