9-136037713-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037713
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037713
    reference: chr 9
allele count: 2
allele frequency: 2.905372032888812e-5
allele num: 68838
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.71+16G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.71+16G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.71+16G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.71+16G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.357+16G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.71+16G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.339+16G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.357+16G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.71+16G>A
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23368
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23259
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2691
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1872
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1125
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21812
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

9-136037714-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037714
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037714
    reference: chr 9
allele count: 67
allele frequency: 9.353622783749826e-4
allele num: 71630
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.339+15C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.357+15C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.71+15C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.357+15C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.71+15C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.71+15C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.71+15C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.71+15C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.71+15C>T
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 22249
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 24766
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1660
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ

9-136037726-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037726
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037726
    reference: chr 9
allele count: 2
allele frequency: 2.326068246842362e-5
allele num: 85982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.357+3G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.339+3G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.71+3G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.71+3G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.71+3G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.71+3G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.71+3G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.357+3G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.71+3G>A
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30950
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16099
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 981
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 1.25e1
  variant carriers: 0
hgvs: c.71+3G>A
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum

9-136037728-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037728
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037728
    reference: chr 9
allele count: 1
allele frequency: 1.14476726881425e-5
allele num: 87354
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.71+1G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.71+1G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.71+1G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.71+1G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.357+1G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.71+1G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.357+1G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.339+1G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.71+1G>A
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15526
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31487
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30184
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1009
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
hgvs: c.71+1G>A
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff

9-136037731-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037731
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037731
    reference: chr 9
allele count: 12
allele frequency: 1.346922282584295e-4
allele num: 89092
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.355G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.337G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.69G>A
  hgvsp: ENST00000540636.1:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.69G>A
  hgvsp: ENST00000372036.3:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.69G>A
  hgvsp: ENST00000542690.1:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.69G>A
  hgvsp: ENST00000372043.3:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.69G>A
  hgvsp: ENST00000372038.3:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.69G>A
  hgvsp: ENST00000372040.3:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.355G>A
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5785
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32086
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14744
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1268
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 30876
  bin: 6.25e1
  variant carriers: 0
hgvs: c.69G>A
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS

9-136037739-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037739
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037739
    reference: chr 9
allele count: 80
allele frequency: 8.752926759885337e-4
allele num: 91398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.61A>G
  hgvsp: ENSP00000437518.1:p.Ser21Gly
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.61A>G
  hgvsp: ENSP00000361110.3:p.Ser21Gly
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.347A>G
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.347A>G
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.61A>G
  hgvsp: ENSP00000361113.3:p.Ser21Gly
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.61A>G
  hgvsp: ENSP00000361106.3:p.Ser21Gly
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.329A>G
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.61A>G
  hgvsp: ENSP00000361108.3:p.Ser21Gly
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.61A>G
  hgvsp: ENSP00000437663.1:p.Ser21Gly
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13538
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31663
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1309
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 9.75e1
  variant carriers: 77
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser21Gly
num of homozygotes: 1
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum

9-136037742-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037742
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037742
    reference: chr 9
allele count: 28151
allele frequency: 2.777109146870808e-1
allele num: 101368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.58C>T
  hgvsp: ENSP00000361106.3:p.Leu20Phe
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.58C>T
  hgvsp: ENSP00000437518.1:p.Leu20Phe
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.344C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.326C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.58C>T
  hgvsp: ENSP00000361110.3:p.Leu20Phe
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.58C>T
  hgvsp: ENSP00000437663.1:p.Leu20Phe
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.58C>T
  hgvsp: ENSP00000361108.3:p.Leu20Phe
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.58C>T
  hgvsp: ENSP00000361113.3:p.Leu20Phe
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.344C>T
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4229
  bin: 1.25e1
  variant carriers: 2412
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 6.25e1
  variant carriers: 339
genotype depth: GenotypeDepth
  all individuals: 3799
  bin: 3.25e1
  variant carriers: 2562
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 3.75e1
  variant carriers: 1960
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 280
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 277
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 4.25e1
  variant carriers: 1421
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 8.75e1
  variant carriers: 247
genotype depth: GenotypeDepth
  all individuals: 8265
  bin: 7.5e0
  variant carriers: 813
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 2.5e0
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 4.75e1
  variant carriers: 1011
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.25e1
  variant carriers: 233
genotype depth: GenotypeDepth
  all individuals: 7079
  bin: 2.75e1
  variant carriers: 3134
genotype depth: GenotypeDepth
  all individuals: 21619
  bin: 2.25e1
  variant carriers: 3500
genotype depth: GenotypeDepth
  all individuals: 1803
  bin: 9.75e1
  variant carriers: 1781
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.75e1
  variant carriers: 277
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.25e1
  variant carriers: 696
genotype depth: GenotypeDepth
  all individuals: 4626
  bin: 1.75e1
  variant carriers: 3556
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 233
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 5.75e1
  variant carriers: 516
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 7.25e1
  variant carriers: 178
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 8.75e1
  variant carriers: 245
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 4.25e1
  variant carriers: 170
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 2.5e0
  variant carriers: 54
hgvs: p.Leu20Phe
num of homozygotes: 3903
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

9-136037750-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037750
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037750
    reference: chr 9
allele count: 7
allele frequency: 7.266838302466573e-5
allele num: 96328
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.50G>A
  hgvsp: ENSP00000361106.3:p.Gly17Asp
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.50G>A
  hgvsp: ENSP00000361113.3:p.Gly17Asp
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.50G>A
  hgvsp: ENSP00000361110.3:p.Gly17Asp
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.50G>A
  hgvsp: ENSP00000361108.3:p.Gly17Asp
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.336G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.50G>A
  hgvsp: ENSP00000437663.1:p.Gly17Asp
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.50G>A
  hgvsp: ENSP00000437518.1:p.Gly17Asp
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.336G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.318G>A
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11060
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4949
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23418
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly17Asp
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

9-136037752-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037752
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037752
    reference: chr 9
allele count: 2
allele frequency: 2.067952933391236e-5
allele num: 96714
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.334G>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.48G>C
  hgvsp: ENST00000372038.3:c.48G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.316G>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.48G>C
  hgvsp: ENST00000372036.3:c.48G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.48G>C
  hgvsp: ENST00000540636.1:c.48G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.48G>C
  hgvsp: ENST00000372040.3:c.48G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.48G>C
  hgvsp: ENST00000372043.3:c.48G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.334G>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.48G>C
  hgvsp: ENST00000542690.1:c.48G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10841
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23560
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala16Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ

9-136037752-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037752
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037752
    reference: chr 9
allele count: 5
allele frequency: 5.16988233347809e-5
allele num: 96714
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.48G>A
  hgvsp: ENST00000372036.3:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.48G>A
  hgvsp: ENST00000540636.1:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.48G>A
  hgvsp: ENST00000372038.3:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.48G>A
  hgvsp: ENST00000542690.1:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.316G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.48G>A
  hgvsp: ENST00000372043.3:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.334G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.334G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.48G>A
  hgvsp: ENST00000372040.3:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23560
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11114
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10841
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3791
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala16Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

9-136037753-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037753
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037753
    reference: chr 9
allele count: 6
allele frequency: 6.223937262712393e-5
allele num: 96402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.47C>T
  hgvsp: ENSP00000437663.1:p.Ala16Val
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.47C>T
  hgvsp: ENSP00000437518.1:p.Ala16Val
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.47C>T
  hgvsp: ENSP00000361110.3:p.Ala16Val
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.47C>T
  hgvsp: ENSP00000361113.3:p.Ala16Val
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.333C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.47C>T
  hgvsp: ENSP00000361108.3:p.Ala16Val
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.315C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.333C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.47C>T
  hgvsp: ENSP00000361106.3:p.Ala16Val
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23474
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10765
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5163
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2163
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1008
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala16Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/9-136037770-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037770
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037770
    reference: chr 9
allele count: 1
allele frequency: 1.074460083807887e-5
allele num: 93070
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.30G>T
  hgvsp: ENST00000542690.1:c.30G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.30G>T
  hgvsp: ENST00000372043.3:c.30G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.30G>T
  hgvsp: ENST00000372038.3:c.30G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.298G>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.30G>T
  hgvsp: ENST00000372040.3:c.30G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.316G>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.30G>T
  hgvsp: ENST00000540636.1:c.30G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.30G>T
  hgvsp: ENST00000372036.3:c.30G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.316G>T
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11097
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu10Leu
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

9-136037774-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037774
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037774
    reference: chr 9
allele count: 3
allele frequency: 3.279620438594573e-5
allele num: 91474
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.294G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.26G>A
  hgvsp: ENSP00000361108.3:p.Gly9Asp
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.26G>A
  hgvsp: ENSP00000361106.3:p.Gly9Asp
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.26G>A
  hgvsp: ENSP00000437663.1:p.Gly9Asp
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.312G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.26G>A
  hgvsp: ENSP00000361110.3:p.Gly9Asp
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.312G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.26G>A
  hgvsp: ENSP00000361113.3:p.Gly9Asp
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.26G>A
  hgvsp: ENSP00000437518.1:p.Gly9Asp
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12921
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1557
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7890
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10894
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19022
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1817
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1331
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1200
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly9Asp
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

9-136037776-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037776
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037776
    reference: chr 9
allele count: 3
allele frequency: 3.327344113928263e-5
allele num: 90162
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.24G>C
  hgvsp: ENST00000542690.1:c.24G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.310G>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.24G>C
  hgvsp: ENST00000372040.3:c.24G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.24G>C
  hgvsp: ENST00000540636.1:c.24G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.24G>C
  hgvsp: ENST00000372036.3:c.24G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.24G>C
  hgvsp: ENST00000372038.3:c.24G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.292G>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.24G>C
  hgvsp: ENST00000372043.3:c.24G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.310G>C
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17868
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10664
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13444
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8572
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2149
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1430
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu8Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/9-136037782-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037782
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037782
    reference: chr 9
allele count: 2
allele frequency: 2.354714137703683e-5
allele num: 84936
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.18G>T
  hgvsp: ENST00000372038.3:c.18G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.18G>T
  hgvsp: ENST00000372040.3:c.18G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.18G>T
  hgvsp: ENST00000372043.3:c.18G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.18G>T
  hgvsp: ENST00000542690.1:c.18G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.18G>T
  hgvsp: ENST00000372036.3:c.18G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.286G>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.304G>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.18G>T
  hgvsp: ENST00000540636.1:c.18G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.304G>T
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11180
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15194
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22478
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu6Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

9-136037782-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037782
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037782
    reference: chr 9
allele count: 1
allele frequency: 1.177357068851841e-5
allele num: 84936
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.18G>A
  hgvsp: ENST00000372043.3:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.18G>A
  hgvsp: ENST00000372036.3:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.18G>A
  hgvsp: ENST00000542690.1:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.286G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.18G>A
  hgvsp: ENST00000372038.3:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.304G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.304G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.18G>A
  hgvsp: ENST00000372040.3:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.18G>A
  hgvsp: ENST00000540636.1:c.18G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2084
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2144
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu6Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum

9-136037783-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037783
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037783
    reference: chr 9
allele count: 2
allele frequency: 2.35277509822836e-5
allele num: 85006
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.17T>C
  hgvsp: ENSP00000361108.3:p.Leu6Pro
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.303T>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.17T>C
  hgvsp: ENSP00000361110.3:p.Leu6Pro
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.17T>C
  hgvsp: ENSP00000437663.1:p.Leu6Pro
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.17T>C
  hgvsp: ENSP00000361113.3:p.Leu6Pro
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.285T>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.303T>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.17T>C
  hgvsp: ENSP00000437518.1:p.Leu6Pro
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.17T>C
  hgvsp: ENSP00000361106.3:p.Leu6Pro
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11171
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2699
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu6Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

9-136037789-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037789
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037789
    reference: chr 9
allele count: 3
allele frequency: 3.693944393823725e-5
allele num: 81214
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.11G>A
  hgvsp: ENSP00000437663.1:p.Arg4Gln
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.11G>A
  hgvsp: ENSP00000361110.3:p.Arg4Gln
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.11G>A
  hgvsp: ENSP00000437518.1:p.Arg4Gln
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.279G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.297G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.11G>A
  hgvsp: ENSP00000361108.3:p.Arg4Gln
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.11G>A
  hgvsp: ENSP00000361106.3:p.Arg4Gln
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.11G>A
  hgvsp: ENSP00000361113.3:p.Arg4Gln
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.297G>A
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2303
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16323
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12240
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12718
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24527
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg4Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

9-136037790-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037790
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037790
    reference: chr 9
allele count: 248
allele frequency: 3.077992354664151e-3
allele num: 80572
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.10C>T
  hgvsp: ENSP00000361106.3:p.Arg4Trp
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.10C>T
  hgvsp: ENSP00000361108.3:p.Arg4Trp
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.10C>T
  hgvsp: ENSP00000361113.3:p.Arg4Trp
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.296C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.296C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.10C>T
  hgvsp: ENSP00000437518.1:p.Arg4Trp
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.278C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.10C>T
  hgvsp: ENSP00000361110.3:p.Arg4Trp
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.10C>T
  hgvsp: ENSP00000437663.1:p.Arg4Trp
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 1.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 3282
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 12993
  bin: 1.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2482
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 11977
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 16562
  bin: 7.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7666
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24897
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 9.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg4Trp
num of homozygotes: 5
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD

9-136037792-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037792
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037792
    reference: chr 9
allele count: 8
allele frequency: 1.021007223626107e-4
allele num: 78354
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.8G>A
  hgvsp: ENSP00000361108.3:p.Arg3His
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.294G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.8G>A
  hgvsp: ENSP00000361106.3:p.Arg3His
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.8G>A
  hgvsp: ENSP00000437663.1:p.Arg3His
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.294G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.8G>A
  hgvsp: ENSP00000361110.3:p.Arg3His
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.8G>A
  hgvsp: ENSP00000437518.1:p.Arg3His
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.276G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.8G>A
  hgvsp: ENSP00000361113.3:p.Arg3His
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3737
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17140
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13720
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2027
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2266
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25630
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg3His
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ

9-136037793-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037793
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037793
    reference: chr 9
allele count: 17
allele frequency: 2.173579501866721e-4
allele num: 78212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.7C>A
  hgvsp: ENSP00000361106.3:p.Arg3Ser
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.7C>A
  hgvsp: ENSP00000361110.3:p.Arg3Ser
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.275C>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.7C>A
  hgvsp: ENSP00000437663.1:p.Arg3Ser
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.293C>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.7C>A
  hgvsp: ENSP00000361113.3:p.Arg3Ser
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.7C>A
  hgvsp: ENSP00000437518.1:p.Arg3Ser
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.293C>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.7C>A
  hgvsp: ENSP00000361108.3:p.Arg3Ser
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17234
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11083
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6949
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13754
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 899
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 8.25e1
  variant carriers: 1
hgvs: p.Arg3Ser
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

9-136037793-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037793
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037793
    reference: chr 9
allele count: 3
allele frequency: 3.835728532705979e-5
allele num: 78212
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.7C>T
  hgvsp: ENSP00000361108.3:p.Arg3Cys
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.7C>T
  hgvsp: ENSP00000361113.3:p.Arg3Cys
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.7C>T
  hgvsp: ENSP00000361106.3:p.Arg3Cys
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.7C>T
  hgvsp: ENSP00000437663.1:p.Arg3Cys
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.7C>T
  hgvsp: ENSP00000437518.1:p.Arg3Cys
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.293C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.7C>T
  hgvsp: ENSP00000361110.3:p.Arg3Cys
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.293C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.275C>T
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11083
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13754
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25910
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15373
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg3Cys
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

9-136037805-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037805
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037805
    reference: chr 9
allele count: 5
allele frequency: 7.044436304206938e-5
allele num: 70978
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.-6C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.-6C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.263C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.-6C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.-6C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.281C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.-6C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.281C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.-6C>T
  variant of: http://identifiers.org/hgnc/9842
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2307
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18588
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16095
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5912
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6111
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2432
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10428
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2634
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD

9-136037813-ACCTGAGCCTGGGCACTTGTAGAGACC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037813
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037787
    reference: chr 9
allele count: 1
allele frequency: 1.531721961829489e-5
allele num: 65286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: 5' UTR
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5132
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18746
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8473
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1385
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27334
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1500
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: ACCTGAGCCTGGGCACTTGTAGAGACC
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

9-136037820-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037820
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037820
    reference: chr 9
allele count: 1
allele frequency: 1.641066036497309e-5
allele num: 60936
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.-21G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.248G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.-21G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.-21G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.-21G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.-21G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.266G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.266G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.-21G>A
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9978
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2890
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16554
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2903
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2076
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD

9-136037824-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037824
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037824
    reference: chr 9
allele count: 2
allele frequency: 3.497481813094572e-5
allele num: 57184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.-25C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.-25C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.262C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.-25C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.-25C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.244C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.-25C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.-25C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.262C>T
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3219
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15449
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11091
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19640
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3253
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22996
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1996
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2731
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP

9-136037830-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037830
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037830
    reference: chr 9
allele count: 2
allele frequency: 3.682427456179113e-5
allele num: 54312
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.238A>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.-31A>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.256A>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.-31A>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.-31A>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.-31A>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.256A>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.-31A>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.-31A>C
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11781
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3239
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2659
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

9-136037835-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037835
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037835
    reference: chr 9
allele count: 1
allele frequency: 1.936633356572934e-5
allele num: 51636
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.251T>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.-36T>C
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.-36T>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.-36T>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.-36T>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.-36T>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.233T>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.-36T>C
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.251T>C
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21278
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1418
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11965
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1925
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3787
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13182
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13752
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4420
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3321
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3715
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

9-136037836-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037836
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037836
    reference: chr 9
allele count: 1
allele frequency: 1.972542212403345e-5
allele num: 50696
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.-37C>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.-37C>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.250C>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.-37C>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.-37C>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.232C>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.-37C>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.-37C>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.250C>A
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11970
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12814
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1628
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13882
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4784
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1055
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum

9-136037838-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037838
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037838
    reference: chr 9
allele count: 5
allele frequency: 1.013581998783702e-4
allele num: 49330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.248G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.-39G>A
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.-39G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.-39G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.248G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.-39G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.-39G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.230G>A
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.-39G>A
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3903
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11951
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1395
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12308
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21986
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2692
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13974
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5148
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

9-136037845-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037845
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037845
    reference: chr 9
allele count: 12804
allele frequency: 2.720666355021036e-1
allele num: 47062
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.-46A>G
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.-46A>G
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.-46A>G
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.241A>G
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.241A>G
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.-46A>G
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.-46A>G
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.223A>G
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.-46A>G
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 150
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 1.75e1
  variant carriers: 1890
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 2.75e1
  variant carriers: 602
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 22988
  bin: 7.5e0
  variant carriers: 7321
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 374
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.75e1
  variant carriers: 615
genotype depth: GenotypeDepth
  all individuals: 11722
  bin: 1.25e1
  variant carriers: 4871
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 2.25e1
  variant carriers: 693
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 3.25e1
  variant carriers: 587
genotype depth: GenotypeDepth
  all individuals: 10475
  bin: 2.5e0
  variant carriers: 1220
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.75e1
  variant carriers: 201
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 5.25e1
  variant carriers: 233
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.25e1
  variant carriers: 529
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 9.25e1
  variant carriers: 675
genotype quality: GenotypeQuality
  all individuals: 2182
  bin: 3.25e1
  variant carriers: 429
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 8.25e1
  variant carriers: 732
genotype quality: GenotypeQuality
  all individuals: 8900
  bin: 7.5e0
  variant carriers: 509
genotype quality: GenotypeQuality
  all individuals: 2216
  bin: 2.75e1
  variant carriers: 561
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 4.25e1
  variant carriers: 162
num of homozygotes: 1830
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD

9-136037845-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037845
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037845
    reference: chr 9
allele count: 1
allele frequency: 2.124856572181378e-5
allele num: 47062
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.-46A>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.-46A>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.223A>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.-46A>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.241A>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.-46A>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.-46A>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.-46A>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.241A>T
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10475
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3844
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11722
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22988
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2216
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3895
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 847
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8900
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

9-136037846-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037846
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037846
    reference: chr 9
allele count: 2
allele frequency: 4.439905873995471e-5
allele num: 45046
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.-47C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.-47C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.-47C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.-47C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.-47C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.-47C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.222C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.240C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.240C>T
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12413
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11132
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3516
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23038
  bin: 7.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7212
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1896
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6278
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1946
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 3320
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

9-136037851-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136037851
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136037851
    reference: chr 9
allele count: 9
allele frequency: 2.079866888519135e-4
allele num: 43272
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000437663
  ensembl transcript: ENST00000540636
  gene symbol: GBGT1
  hgvsc: ENST00000540636.1:c.-52C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000472281
  gene symbol: GBGT1
  hgvsc: ENST00000472281.1:n.235C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000487864
  gene symbol: GBGT1
  hgvsc: ENST00000487864.1:n.217C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000160271
  ensembl protein: ENSP00000437518
  ensembl transcript: ENST00000542690
  gene symbol: RALGDS
  hgvsc: ENST00000542690.1:c.-52C>T
  variant of: http://identifiers.org/hgnc/9842
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361106
  ensembl transcript: ENST00000372036
  gene symbol: GBGT1
  hgvsc: ENST00000372036.3:c.-52C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361113
  ensembl transcript: ENST00000372043
  gene symbol: GBGT1
  hgvsc: ENST00000372043.3:c.-52C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361108
  ensembl transcript: ENST00000372038
  gene symbol: GBGT1
  hgvsc: ENST00000372038.3:c.-52C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148288
  ensembl protein: ENSP00000361110
  ensembl transcript: ENST00000372040
  gene symbol: GBGT1
  hgvsc: ENST00000372040.3:c.-52C>T
  variant of: http://identifiers.org/hgnc/20460
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148288
  ensembl transcript: ENST00000470431
  gene symbol: GBGT1
  hgvsc: ENST00000470431.1:n.235C>T
  variant of: http://identifiers.org/hgnc/20460
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3463
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12476
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23095
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11152
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1945
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 6391
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9524
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2638
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

9-136081254-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081254
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081254
    reference: chr 9
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.*1+50C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*122+50C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.422+50C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*122+50C>T
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3796
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3817
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25170
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57039
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

9-136081256-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081256
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081256
    reference: chr 9
allele count: 2
allele frequency: 1.647690761397901e-5
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*122+48T>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.422+48T>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.*1+48T>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*122+48T>A
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25170
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3796
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1970
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3817
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57041
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: A
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

9-136081261-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081261
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081261
    reference: chr 9
allele count: 2
allele frequency: 1.669337606837607e-5
allele num: 119808
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.422+43T>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*122+43T>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.*1+43T>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*122+43T>C
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29265
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

9-136081261-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081261
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081260
    reference: chr 9
allele count: 28489
allele frequency: 2.377887954059829e-1
allele num: 119808
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*122+42delC
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.*1+42delC
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.422+42delC
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*122+42delC
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 3112
  bin: 7.25e1
  variant carriers: 892
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 5.25e1
  variant carriers: 455
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 7.75e1
  variant carriers: 1053
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1241
  bin: 4.25e1
  variant carriers: 267
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 4.75e1
  variant carriers: 431
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 6.25e1
  variant carriers: 689
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 6.75e1
  variant carriers: 815
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 184
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 3.25e1
  variant carriers: 121
genotype depth: GenotypeDepth
  all individuals: 3513
  bin: 8.75e1
  variant carriers: 1318
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 8.25e1
  variant carriers: 1146
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 2.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 9.25e1
  variant carriers: 1422
genotype depth: GenotypeDepth
  all individuals: 29265
  bin: 9.75e1
  variant carriers: 19363
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 5.75e1
  variant carriers: 594
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 6.25e1
  variant carriers: 149
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 7.5e0
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.25e1
  variant carriers: 114
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 1.25e1
  variant carriers: 93
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 4.25e1
  variant carriers: 120
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 2.5e0
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 7.75e1
  variant carriers: 163
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 7.25e1
  variant carriers: 137
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 8.75e1
  variant carriers: 174
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 4.75e1
  variant carriers: 130
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.75e1
  variant carriers: 121
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 1.75e1
  variant carriers: 101
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.25e1
  variant carriers: 117
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.25e1
  variant carriers: 120
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 6.75e1
  variant carriers: 148
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 9.25e1
  variant carriers: 175
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.75e1
  variant carriers: 107
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: AG
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

9-136081270-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081270
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081270
    reference: chr 9
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*122+34C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.422+34C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.*1+34C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*122+34C>T
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30133
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

9-136081272-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081272
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081272
    reference: chr 9
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*122+32G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*122+32G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.*1+32G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.422+32G>A
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30133
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57907
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

9-136081279-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081279
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081279
    reference: chr 9
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.422+25T>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.*1+25T>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*122+25T>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*122+25T>C
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1424
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3069
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3337
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30134
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57906
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

9-136081283-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081283
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081283
    reference: chr 9
allele count: 29417
allele frequency: 2.435867711110743e-1
allele num: 120766
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.*1+21G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*122+21G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*122+21G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.422+21G>A
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 5.75e1
  variant carriers: 161
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 3.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 8.25e1
  variant carriers: 536
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 6.25e1
  variant carriers: 232
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 3.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 7.25e1
  variant carriers: 366
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35491
  bin: 9.75e1
  variant carriers: 25839
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 5.25e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 4.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 2781
  bin: 7.75e1
  variant carriers: 475
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 9.25e1
  variant carriers: 715
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 6.75e1
  variant carriers: 310
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 8.75e1
  variant carriers: 603
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.25e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.5e0
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 7.75e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 6.25e1
  variant carriers: 37
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 7.25e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 8.25e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 57135
  bin: 9.75e1
  variant carriers: 28828
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 9.25e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 7.5e0
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 6.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.75e1
  variant carriers: 34
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

9-136081288-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081288
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081288
    reference: chr 9
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.422+16G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.*1+16G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*122+16G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*122+16G>A
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1945
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35626
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2761
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58270
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

9-136081289-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081289
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081289
    reference: chr 9
allele count: 29412
allele frequency: 2.436300984062821e-1
allele num: 120724
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*122+15A>G
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.*1+15A>G
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*122+15A>G
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.422+15A>G
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 2430
  bin: 9.25e1
  variant carriers: 510
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 36750
  bin: 9.75e1
  variant carriers: 27052
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1842
  bin: 6.25e1
  variant carriers: 130
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2526
  bin: 8.25e1
  variant carriers: 386
genotype depth: GenotypeDepth
  all individuals: 2221
  bin: 6.75e1
  variant carriers: 182
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 5.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 2573
  bin: 8.75e1
  variant carriers: 446
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 7.25e1
  variant carriers: 262
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 4.25e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 7.75e1
  variant carriers: 316
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 5.75e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.25e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 6.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 8.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 7.75e1
  variant carriers: 60
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 9.25e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 33
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.5e0
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 7.25e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 6.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 57115
  bin: 9.75e1
  variant carriers: 28821
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 31
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

9-136081290-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081290
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081290
    reference: chr 9
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.422+14T>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*122+14T>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*122+14T>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.*1+14T>A
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2743
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35314
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57609
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

9-136081293-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081293
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081293
    reference: chr 9
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*122+11C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.*1+11C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*122+11C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.422+11C>T
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35314
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2743
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57609
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

9-136081294-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081294
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081294
    reference: chr 9
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*122+10C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*122+10C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.422+10C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.*1+10C>T
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2743
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35315
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57608
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP

9-136081294-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081294
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081294
    reference: chr 9
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*122+10C>G
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.*1+10C>G
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.422+10C>G
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*122+10C>G
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2743
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35315
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57608
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

9-136081309-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081309
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081309
    reference: chr 9
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*117A>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*117A>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.417A>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.509A>T
  hgvsp: ENSP00000361104.3:p.His170Leu
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2743
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35315
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His170Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

9-136081311-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081311
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081311
    reference: chr 9
allele count: 3
allele frequency: 2.471006852925672e-5
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*115A>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.507A>T
  hgvsp: ENSP00000361104.3:p.Glu169Asp
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*115A>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.415A>T
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35315
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2743
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57609
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu169Asp
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

9-136081313-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081313
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081313
    reference: chr 9
allele count: 27
allele frequency: 2.223906167633105e-4
allele num: 121408
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*113G>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*113G>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.413G>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.505G>C
  hgvsp: ENSP00000361104.3:p.Glu169Gln
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35327
  bin: 9.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2741
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57609
  bin: 9.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu169Gln
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

9-136081313-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081313
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081313
    reference: chr 9
allele count: 9
allele frequency: 7.413020558777017e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.413G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*113G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.505G>A
  hgvsp: ENSP00000361104.3:p.Glu169Lys
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*113G>A
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2701
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2741
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35327
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu169Lys
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD

9-136081314-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081314
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081314
    reference: chr 9
allele count: 4
allele frequency: 3.294675803900896e-5
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*112C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*112C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.412C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.504C>T
  hgvsp: ENST00000372034.3:c.504C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2743
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1983
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1689
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35322
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro168Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

9-136081315-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081315
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081315
    reference: chr 9
allele count: 19
allele frequency: 1.565203064502842e-4
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*111C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.411C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*111C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.503C>T
  hgvsp: ENSP00000361104.3:p.Pro168Leu
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2744
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35330
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro168Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

9-136081316-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081316
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081316
    reference: chr 9
allele count: 4
allele frequency: 3.294675803900896e-5
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.502C>A
  hgvsp: ENSP00000361104.3:p.Pro168Thr
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.410C>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*110C>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*110C>A
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35326
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2741
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2705
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57611
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro168Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

9-136081319-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081319
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081319
    reference: chr 9
allele count: 9654
allele frequency: 7.952224052718286e-2
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*107G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.407G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*107G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.499G>A
  hgvsp: ENSP00000361104.3:p.Val167Ile
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2268
  bin: 7.25e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2432
  bin: 8.25e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 6.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 9.25e1
  variant carriers: 130
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 6.75e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 5.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 5.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 4.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 38295
  bin: 9.75e1
  variant carriers: 8642
genotype depth: GenotypeDepth
  all individuals: 2439
  bin: 7.75e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 2435
  bin: 8.75e1
  variant carriers: 103
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 57852
  bin: 9.75e1
  variant carriers: 9348
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.25e1
  variant carriers: 5
hgvs: p.Val167Ile
num of homozygotes: 277
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

9-136081320-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081320
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081320
    reference: chr 9
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*106C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.498C>T
  hgvsp: ENST00000372034.3:c.498C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*106C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.406C>T
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36271
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2607
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57507
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Cys166Cys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

9-136081329-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081329
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081329
    reference: chr 9
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*99-2A>G
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.399-2A>G
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*99-2A>G
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.491-2A>G
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2607
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36271
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57508
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 9.25e1
  variant carriers: 0
hgvs: c.491-2A>G
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/9-136081340-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081340
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081340
    reference: chr 9
allele count: 2
allele frequency: 1.647365039619129e-5
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*99-13T>G
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*99-13T>G
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.491-13T>G
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.399-13T>G
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36272
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 57507
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

9-136081352-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081352
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081352
    reference: chr 9
allele count: 3
allele frequency: 2.471047559428694e-5
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*99-25C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*99-25C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.491-25C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.399-25C>T
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2218
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2432
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36274
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57508
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

9-136081356-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081356
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081356
    reference: chr 9
allele count: 25310
allele frequency: 2.144261072893016e-1
allele num: 118036
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.399-29A>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*99-29A>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*99-29A>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.491-29A>C
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 5.75e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 7.25e1
  variant carriers: 358
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 8.75e1
  variant carriers: 518
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2647
  bin: 7.75e1
  variant carriers: 375
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 3.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 9.25e1
  variant carriers: 554
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 4.75e1
  variant carriers: 92
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 5.25e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 6.75e1
  variant carriers: 290
genotype depth: GenotypeDepth
  all individuals: 36381
  bin: 9.75e1
  variant carriers: 22431
genotype depth: GenotypeDepth
  all individuals: 2644
  bin: 8.25e1
  variant carriers: 464
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 6.25e1
  variant carriers: 249
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.25e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 1.25e1
  variant carriers: 101
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 8.75e1
  variant carriers: 188
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 3.25e1
  variant carriers: 142
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.25e1
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 7.25e1
  variant carriers: 171
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 5.75e1
  variant carriers: 144
genotype quality: GenotypeQuality
  all individuals: 786
  bin: 6.25e1
  variant carriers: 168
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 4.25e1
  variant carriers: 155
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 2.75e1
  variant carriers: 126
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 5.25e1
  variant carriers: 137
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 2.5e0
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 3.75e1
  variant carriers: 135
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 1.75e1
  variant carriers: 113
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 4.75e1
  variant carriers: 121
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 9.25e1
  variant carriers: 197
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 7.75e1
  variant carriers: 174
genotype quality: GenotypeQuality
  all individuals: 52091
  bin: 9.75e1
  variant carriers: 22955
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

9-136081362-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081362
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081362
    reference: chr 9
allele count: 25259
allele frequency: 2.115954898051502e-1
allele num: 119374
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.491-35C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*99-35C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*99-35C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.399-35C>T
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 3.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.25e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 3.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 6.75e1
  variant carriers: 397
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 5.25e1
  variant carriers: 201
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 7.25e1
  variant carriers: 443
genotype depth: GenotypeDepth
  all individuals: 1972
  bin: 6.25e1
  variant carriers: 324
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 5.75e1
  variant carriers: 280
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2693
  bin: 9.25e1
  variant carriers: 628
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 7.75e1
  variant carriers: 484
genotype depth: GenotypeDepth
  all individuals: 34993
  bin: 9.75e1
  variant carriers: 21365
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 8.25e1
  variant carriers: 582
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 4.75e1
  variant carriers: 143
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 8.75e1
  variant carriers: 617
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 5.25e1
  variant carriers: 138
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 5.75e1
  variant carriers: 137
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 1.75e1
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.5e0
  variant carriers: 88
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.25e1
  variant carriers: 109
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 1.25e1
  variant carriers: 100
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 8.25e1
  variant carriers: 214
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 6.75e1
  variant carriers: 155
genotype quality: GenotypeQuality
  all individuals: 52639
  bin: 9.75e1
  variant carriers: 22954
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 7.25e1
  variant carriers: 159
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 4.75e1
  variant carriers: 124
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 6.25e1
  variant carriers: 167
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.5e0
  variant carriers: 94
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 3.75e1
  variant carriers: 132
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 7.75e1
  variant carriers: 191
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 9.25e1
  variant carriers: 198
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 2.75e1
  variant carriers: 140
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

9-136081363-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081363
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081363
    reference: chr 9
allele count: 3
allele frequency: 2.471169686985173e-5
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*99-36G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.399-36G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.491-36G>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*99-36G>A
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2855
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34607
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56465
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ

9-136081364-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081364
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081364
    reference: chr 9
allele count: 10
allele frequency: 8.366520531441385e-5
allele num: 119524
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*99-37C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*99-37C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.491-37C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.399-37C>T
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34259
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52695
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

9-136081364-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081364
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081363
    reference: chr 9
allele count: 25116
allele frequency: 2.101335296676818e-1
allele num: 119524
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*99-38delG
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.491-38delG
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.399-38delG
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*99-38delG
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 7.25e1
  variant carriers: 463
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 6.25e1
  variant carriers: 378
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.25e1
  variant carriers: 140
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.75e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 2906
  bin: 7.75e1
  variant carriers: 579
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34259
  bin: 9.75e1
  variant carriers: 20654
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 5.75e1
  variant carriers: 337
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 3.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 5.25e1
  variant carriers: 265
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 9.25e1
  variant carriers: 698
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 8.25e1
  variant carriers: 598
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 4.75e1
  variant carriers: 174
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 6.75e1
  variant carriers: 420
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 8.75e1
  variant carriers: 658
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 6.25e1
  variant carriers: 164
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 8.25e1
  variant carriers: 222
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 8.75e1
  variant carriers: 181
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 1.25e1
  variant carriers: 108
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.25e1
  variant carriers: 131
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 2.75e1
  variant carriers: 125
genotype quality: GenotypeQuality
  all individuals: 52695
  bin: 9.75e1
  variant carriers: 22844
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 1.75e1
  variant carriers: 106
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 7.25e1
  variant carriers: 164
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 7.5e0
  variant carriers: 95
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 4.25e1
  variant carriers: 154
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.75e1
  variant carriers: 137
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.75e1
  variant carriers: 127
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.5e0
  variant carriers: 72
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.25e1
  variant carriers: 99
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 3.25e1
  variant carriers: 118
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 9.25e1
  variant carriers: 187
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: GC
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

9-136081369-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081369
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081369
    reference: chr 9
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*99-42T>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.491-42T>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.399-42T>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*99-42T>A
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3515
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3424
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3362
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2795
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3029
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28878
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55020
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

9-136081377-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081377
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081377
    reference: chr 9
allele count: 142
allele frequency: 1.169764070119942e-3
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.491-50C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*99-50C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.399-50C>T
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*99-50C>T
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1791
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1564
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3361
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3425
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3029
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3514
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2786
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 28898
  bin: 9.75e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55022
  bin: 9.75e1
  variant carriers: 142
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 848
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/9-136081653-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081653
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081653
    reference: chr 9
allele count: 7
allele frequency: 5.767963085036256e-5
allele num: 121360
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.490+49T>G
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*98+49T>G
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.398+49T>G
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*98+49T>G
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16884
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14700
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5174
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4694
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16140
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3772
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8225
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1912
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3566
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

9-136081653-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081653
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081653
    reference: chr 9
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*98+49T>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*98+49T>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.398+49T>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.490+49T>C
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14700
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16884
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3566
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2764
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3772
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4694
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8225
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16140
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

9-136081672-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081672
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081672
    reference: chr 9
allele count: 4
allele frequency: 3.295707341188102e-5
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*98+30T>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.398+30T>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*98+30T>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.490+30T>A
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5182
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16996
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19444
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3592
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1915
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3760
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8270
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2757
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16131
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

9-136081674-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081674
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081674
    reference: chr 9
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*98+28T>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.490+28T>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*98+28T>C
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.398+28T>C
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14779
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8269
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3591
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2759
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19448
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1916
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4703
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16130
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

9-136081680-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081680
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081680
    reference: chr 9
allele count: 2
allele frequency: 1.647772211969417e-5
allele num: 121376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl transcript: ENST00000461961
  gene symbol: OBP2B
  hgvsc: ENST00000461961.1:n.398+22C>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361104
  ensembl transcript: ENST00000372034
  gene symbol: OBP2B
  hgvsc: ENST00000372034.3:c.490+22C>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000361102
  ensembl transcript: ENST00000372032
  gene symbol: OBP2B
  hgvsc: ENST00000372032.2:c.*98+22C>A
  variant of: http://identifiers.org/hgnc/23381
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000171102
  ensembl protein: ENSP00000434927
  ensembl transcript: ENST00000473737
  gene symbol: OBP2B
  hgvsc: ENST00000473737.1:c.*98+22C>A
  variant of: http://identifiers.org/hgnc/23381
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 786
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17027
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2346
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3763
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8276
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16126
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 19481
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

9-136081684-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 136081684
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 136081684
    reference: chr 9
allele count: 3
allele frequency: 2.471536142096851e-5
allele num: 121382
alternate allele: T
canonical: true
consequence: intron
filter: PASS
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 337
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22043
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 444
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1775
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2381
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3970
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.537555826228177e-5
allele num: 39408
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5232
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.583280557314756e-4
allele num: 6316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10976
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2458
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

FS
type: SiteQuality
SIO_000300: 8.75e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.19e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.561e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.1e-2

QD
type: SiteQuality
SIO_000300: 9.359999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e-1

DP
type: SiteQuality
SIO_000300: 9.41765e5

GenotypeQuality
all individuals: 1583
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 245
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 259
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 838
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 326
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2865
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 224
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 375
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1253
bin: 9.75e1
variant carriers: 63

GenotypeQuality
all individuals: 23487
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21216
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.427891618918131e-5
allele num: 41188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5320
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 1.157407407407407e-3
allele num: 4320
num of homozygotes: 0

African
type: Population
allele count: 61
allele frequency: 9.31013431013431e-3
allele num: 6552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2640
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.0e-2

FS
type: SiteQuality
SIO_000300: 6.77e-1

DP
type: SiteQuality
SIO_000300: 9.67883e5

VQSLOD
type: SiteQuality
SIO_000300: 5.570000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

QD
type: SiteQuality
SIO_000300: 1.351e1

MQ
type: SiteQuality
SIO_000300: 5.79e1

GenotypeQuality
all individuals: 1023
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1055
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1248
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3458
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15860
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 5.75e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 505
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1362
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6124
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 582
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.651800462504129e-4
allele num: 12108
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.23e-1

DP
type: SiteQuality
SIO_000300: 1.092069e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.568e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.106e0

VQSLOD
type: SiteQuality
SIO_000300: -6.197e-1

MQ
type: SiteQuality
SIO_000300: 5.766e1

QD
type: SiteQuality
SIO_000300: 9.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

GenotypeQuality
all individuals: 516
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 997
bin: 2.75e1
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GenotypeQuality
all individuals: 129
bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 430
bin: 8.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 964
bin: 3.25e1
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GenotypeQuality
all individuals: 368
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6664
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7710
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6214
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.985072256630141e-5
allele num: 50376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12218
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.436e0

VQSLOD
type: SiteQuality
SIO_000300: -8.399e-1

QD
type: SiteQuality
SIO_000300: 1.401e1

MQ
type: SiteQuality
SIO_000300: 5.649e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.07e-1

DP
type: SiteQuality
SIO_000300: 1.103682e6

FS
type: SiteQuality
SIO_000300: 2.988e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

GenotypeQuality
all individuals: 942
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 4.75e1
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GenotypeQuality
all individuals: 253
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 9
allele frequency: 1.152368758002561e-3
allele num: 7810
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3684
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.434308663224326e-4
allele num: 6972
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.893626134018611e-5
allele num: 51366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12316
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.355e0

MQRankSum
type: SiteQuality
SIO_000300: 2.64e-1

DP
type: SiteQuality
SIO_000300: 1.11879e6

MQ
type: SiteQuality
SIO_000300: 5.82e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

QD
type: SiteQuality
SIO_000300: 9.07e0

VQSLOD
type: SiteQuality
SIO_000300: 3.95e-1

FS
type: SiteQuality
SIO_000300: 5.54e-1

GenotypeQuality
all individuals: 862
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1072
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1141
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 581
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variant carriers: 1

GenotypeQuality
all individuals: 548
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.907013997482742e-5
allele num: 52438
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12638
num of homozygotes: 0

African
type: Population
allele count: 77
allele frequency: 9.598603839441536e-3
allele num: 8022
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.711496746203905e-4
allele num: 7376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.79e1

MQRankSum
type: SiteQuality
SIO_000300: 5.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.29e-1

QD
type: SiteQuality
SIO_000300: 1.153e1

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.06e-1

DP
type: SiteQuality
SIO_000300: 1.139207e6

FS
type: SiteQuality
SIO_000300: 5.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.39e-1

GenotypeQuality
all individuals: 19022
bin: 6.25e1
variant carriers: 323

GenotypeQuality
all individuals: 872
bin: 7.5e0
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GenotypeQuality
all individuals: 689
bin: 4.75e1
variant carriers: 285

GenotypeQuality
all individuals: 21934
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variant carriers: 21341

GenotypeQuality
all individuals: 683
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variant carriers: 192

GenotypeQuality
all individuals: 595
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variant carriers: 234

GenotypeQuality
all individuals: 297
bin: 1.25e1
variant carriers: 95

GenotypeQuality
all individuals: 429
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variant carriers: 122

GenotypeQuality
all individuals: 7952
bin: 2.25e1
variant carriers: 149

GenotypeQuality
all individuals: 899
bin: 5.25e1
variant carriers: 335

GenotypeQuality
all individuals: 663
bin: 8.25e1
variant carriers: 295

GenotypeQuality
all individuals: 1902
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variant carriers: 290

GenotypeQuality
all individuals: 871
bin: 7.75e1
variant carriers: 270

GenotypeQuality
all individuals: 522
bin: 9.25e1
variant carriers: 337

GenotypeQuality
all individuals: 706
bin: 2.75e1
variant carriers: 134

GenotypeQuality
all individuals: 454
bin: 5.75e1
variant carriers: 216

Latino
type: Population
allele count: 2752
allele frequency: 3.091440125814424e-1
allele num: 8902
num of homozygotes: 298

Other
type: Population
allele count: 194
allele frequency: 2.732394366197183e-1
allele num: 710
num of homozygotes: 29

South Asian
type: Population
allele count: 4931
allele frequency: 3.49270434905794e-1
allele num: 14118
num of homozygotes: 810

European (Finnish)
type: Population
allele count: 1285
allele frequency: 2.798344947735192e-1
allele num: 4592
num of homozygotes: 128

East Asian
type: Population
allele count: 4505
allele frequency: 5.712655338574689e-1
allele num: 7886
num of homozygotes: 1220

African
type: Population
allele count: 2587
allele frequency: 2.93244162321469e-1
allele num: 8822
num of homozygotes: 337

European (Non-Finnish)
type: Population
allele count: 11897
allele frequency: 2.111718555859278e-1
allele num: 56338
num of homozygotes: 1081

MQRankSum
type: SiteQuality
SIO_000300: 2.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.155e0

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

MQ
type: SiteQuality
SIO_000300: 5.74e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

QD
type: SiteQuality
SIO_000300: 1.542e1

FS
type: SiteQuality
SIO_000300: 5.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.89e-2

DP
type: SiteQuality
SIO_000300: 1.612556e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.71e-1

GenotypeQuality
all individuals: 738
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 588
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variant carriers: 0

GenotypeQuality
all individuals: 1285
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GenotypeQuality
all individuals: 1106
bin: 3.25e1
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GenotypeQuality
all individuals: 2179
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GenotypeQuality
all individuals: 283
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GenotypeQuality
all individuals: 475
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GenotypeQuality
all individuals: 523
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variant carriers: 2

GenotypeQuality
all individuals: 300
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GenotypeQuality
all individuals: 29515
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GenotypeQuality
all individuals: 13165
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GenotypeQuality
all individuals: 818
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GenotypeQuality
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GenotypeQuality
all individuals: 973
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GenotypeQuality
all individuals: 3677
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variant carriers: 1

GenotypeQuality
all individuals: 1239
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13320
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 9.165230780511054e-5
allele num: 54554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8330
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.524390243902439e-3
allele num: 656
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.230920728705071e-4
allele num: 8124
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.773e1

FS
type: SiteQuality
SIO_000300: 4.933e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.449e0

QD
type: SiteQuality
SIO_000300: 2.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.163e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

DP
type: SiteQuality
SIO_000300: 1.276628e6

GenotypeQuality
all individuals: 1243
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3791
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 978
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GenotypeQuality
all individuals: 195
bin: 1.25e1
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GenotypeQuality
all individuals: 13667
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GenotypeQuality
all individuals: 628
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GenotypeQuality
all individuals: 328
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GenotypeQuality
all individuals: 1092
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GenotypeQuality
all individuals: 1021
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GenotypeQuality
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GenotypeQuality
all individuals: 768
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GenotypeQuality
all individuals: 392
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GenotypeQuality
all individuals: 30199
bin: 6.25e1
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GenotypeQuality
all individuals: 472
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GenotypeQuality
all individuals: 1239
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variant carriers: 0

GenotypeQuality
all individuals: 2177
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8186
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54746
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.497005988023952e-4
allele num: 13360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4192
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.21e-2

QD
type: SiteQuality
SIO_000300: 8.140000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.351e0

FS
type: SiteQuality
SIO_000300: 4.979e0

DP
type: SiteQuality
SIO_000300: 1.270776e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.172e0

MQ
type: SiteQuality
SIO_000300: 5.738e1

GenotypeQuality
all individuals: 1021
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1092
bin: 2.75e1
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GenotypeQuality
all individuals: 195
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GenotypeQuality
all individuals: 576
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GenotypeQuality
all individuals: 13667
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GenotypeQuality
all individuals: 1243
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GenotypeQuality
all individuals: 824
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GenotypeQuality
all individuals: 542
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GenotypeQuality
all individuals: 392
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GenotypeQuality
all individuals: 30199
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1239
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variant carriers: 0

GenotypeQuality
all individuals: 768
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GenotypeQuality
all individuals: 2177
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 472
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4192
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8364
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.48502994011976e-5
allele num: 13360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.653234939538962e-5
allele num: 54746
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.443195699975568e-4
allele num: 8186
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7206
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.979e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.21e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.41e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.351e0

DP
type: SiteQuality
SIO_000300: 1.270776e6

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.172e0

MQ
type: SiteQuality
SIO_000300: 5.738e1

GenotypeQuality
all individuals: 508
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 466
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GenotypeQuality
all individuals: 30282
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GenotypeQuality
all individuals: 797
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GenotypeQuality
all individuals: 640
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GenotypeQuality
all individuals: 247
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GenotypeQuality
all individuals: 1295
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GenotypeQuality
all individuals: 174
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GenotypeQuality
all individuals: 3696
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GenotypeQuality
all individuals: 1089
bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 534
bin: 4.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.660054168801698e-5
allele num: 54644
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.39703827884884e-4
allele num: 7158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.229407425620851e-4
allele num: 8134
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.197604790419162e-4
allele num: 8350
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.51653638003608e-5
allele num: 13304
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.505e0

MQ
type: SiteQuality
SIO_000300: 5.7e1

DP
type: SiteQuality
SIO_000300: 1.272763e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.861e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

QD
type: SiteQuality
SIO_000300: 5.71e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.53e-1

GenotypeQuality
all individuals: 362
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13014
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8050
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6954
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3928
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.890073334845392e-5
allele num: 52908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.96e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.21e-1

QD
type: SiteQuality
SIO_000300: 5.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.846e0

DP
type: SiteQuality
SIO_000300: 1.222689e6

VQSLOD
type: SiteQuality
SIO_000300: -1.39e0

FS
type: SiteQuality
SIO_000300: 5.237e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

MQ
type: SiteQuality
SIO_000300: 5.707e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52014
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7924
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.356665698518733e-4
allele num: 6886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3820
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7320
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12888
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

MQ
type: SiteQuality
SIO_000300: 5.883e1

DP
type: SiteQuality
SIO_000300: 1.201869e6

FS
type: SiteQuality
SIO_000300: 2.015e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.049e0

MQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3742
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7122
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.392386530014642e-4
allele num: 6830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12768
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.614e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.17e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

MQ
type: SiteQuality
SIO_000300: 5.758e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.244e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.53e-1

DP
type: SiteQuality
SIO_000300: 1.183179e6

QD
type: SiteQuality
SIO_000300: 7.85e0

GenotypeQuality
all individuals: 933
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 724
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.157831275206852e-5
allele num: 48102
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3444
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.068e0

MQ
type: SiteQuality
SIO_000300: 5.695e1

FS
type: SiteQuality
SIO_000300: 7.3e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.488e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.6e-3

DP
type: SiteQuality
SIO_000300: 1.106706e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.76e-1

QD
type: SiteQuality
SIO_000300: 7.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.082767539605561e-5
allele num: 12372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.3e-1

QD
type: SiteQuality
SIO_000300: 7.48e0

MQ
type: SiteQuality
SIO_000300: 5.695e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.068e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48134
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.063725490196078e-4
allele num: 6528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3454
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12384
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.3e-3

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.523157208088715e-5
allele num: 45990
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 550
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7320
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

InbreedingCoeff
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SIO_000300: -9.900000000000001e-3

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 231

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7266
num of homozygotes: 0

South Asian
type: Population
allele count: 236
allele frequency: 1.971595655806182e-2
allele num: 11970
num of homozygotes: 5

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.97290543206629e-4
allele num: 45618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3158
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5792
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.608234158893535e-4
allele num: 6218
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 3.636363636363636e-3
allele num: 550
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

FS
type: SiteQuality
SIO_000300: 1.918e0

DP
type: SiteQuality
SIO_000300: 1.041575e6

QD
type: SiteQuality
SIO_000300: 1.048e1

MQ
type: SiteQuality
SIO_000300: 5.743e1

VQSLOD
type: SiteQuality
SIO_000300: -4.898e-1

GenotypeQuality
all individuals: 332
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3905
bin: 7.5e0
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GenotypeQuality
all individuals: 872
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variant carriers: 1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2015
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2139
bin: 6.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5492
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 4.249532551419344e-4
allele num: 11766
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.763154335181928e-5
allele num: 44358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6078
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 526
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.003156e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.07e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

FS
type: SiteQuality
SIO_000300: 5.580000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.083e1

VQSLOD
type: SiteQuality
SIO_000300: -1.043e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

MQ
type: SiteQuality
SIO_000300: 5.647e1

GenotypeQuality
all individuals: 268
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25910
bin: 2.25e1
variant carriers: 1

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 15

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2115
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variant carriers: 0

GenotypeQuality
all individuals: 1964
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6062
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7108
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3002
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 1.098498718418162e-3
allele num: 5462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 2.48228550796588e-4
allele num: 44314
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11736
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-2

DP
type: SiteQuality
SIO_000300: 1.001561e6

MQ
type: SiteQuality
SIO_000300: 5.741e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.9e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.37e-1

QD
type: SiteQuality
SIO_000300: 1.066e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

GenotypeQuality
all individuals: 649
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3914
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 865
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 492
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GenotypeQuality
all individuals: 2023
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2115
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variant carriers: 0

GenotypeQuality
all individuals: 268
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variant carriers: 0

GenotypeQuality
all individuals: 2250
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 899
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7108
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.299241174529858e-4
allele num: 6062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.520790729379687e-5
allele num: 11736
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.001561e6

VQSLOD
type: SiteQuality
SIO_000300: -2.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQ
type: SiteQuality
SIO_000300: 5.741e1

QD
type: SiteQuality
SIO_000300: 1.066e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-2

GenotypeQuality
all individuals: 317
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 583
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variant carriers: 0

GenotypeQuality
all individuals: 831
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variant carriers: 0

GenotypeQuality
all individuals: 886
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GenotypeQuality
all individuals: 1634
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variant carriers: 0

GenotypeQuality
all individuals: 205
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GenotypeQuality
all individuals: 1047
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GenotypeQuality
all individuals: 434
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GenotypeQuality
all individuals: 28227
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variant carriers: 1

GenotypeQuality
all individuals: 2010
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variant carriers: 5

GenotypeQuality
all individuals: 260
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GenotypeQuality
all individuals: 628
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variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 470
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.250500200080032e-4
allele num: 39984
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4564
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-2

MQ
type: SiteQuality
SIO_000300: 5.896e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.99668e5

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.46e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.442e-1

FS
type: SiteQuality
SIO_000300: 4.523e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

QD
type: SiteQuality
SIO_000300: 1.251e1

GenotypeQuality
all individuals: 2923
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
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GenotypeQuality
all individuals: 1999
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variant carriers: 1

GenotypeQuality
all individuals: 6897
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GenotypeQuality
all individuals: 613
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GenotypeQuality
all individuals: 2702
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GenotypeQuality
all individuals: 268
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GenotypeQuality
all individuals: 539
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variant carriers: 0

GenotypeQuality
all individuals: 313
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variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6208
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.729257641921397e-5
allele num: 36640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2286
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5060
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3822
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10840
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.167e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.177e1

DP
type: SiteQuality
SIO_000300: 8.31664e5

QD
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: -3.308e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.224e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.89e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.97e-1

GenotypeQuality
all individuals: 604
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 2.5e0
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GenotypeQuality
all individuals: 1995
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 10507
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3044
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4680
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5944
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.936512597639044e-5
allele num: 34054
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.84745e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.16e-2

MQ
type: SiteQuality
SIO_000300: 5.718e1

QD
type: SiteQuality
SIO_000300: 2.497e1

VQSLOD
type: SiteQuality
SIO_000300: -1.029e0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 230
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
all individuals: 507
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GenotypeQuality
all individuals: 312
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5666
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.288912647003333e-5
allele num: 31802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1912
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.599999999999999e-3

MQ
type: SiteQuality
SIO_000300: 5.635e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.45e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.09e1

DP
type: SiteQuality
SIO_000300: 7.55864e5

GenotypeQuality
all individuals: 504
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 603
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
all individuals: 3598
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GenotypeQuality
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GenotypeQuality
all individuals: 338
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GenotypeQuality
all individuals: 771
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GenotypeQuality
all individuals: 71
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GenotypeQuality
all individuals: 12989
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1994
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 360
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 4.816955684007707e-4
allele num: 4152
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30184
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.4e1

MQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.58e-2

FS
type: SiteQuality
SIO_000300: 3.118e0

VQSLOD
type: SiteQuality
SIO_000300: -1.409e0

MQ
type: SiteQuality
SIO_000300: 5.801e1

DP
type: SiteQuality
SIO_000300: 7.34125e5

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.37e-1

GenotypeQuality
all individuals: 1994
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18856
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2904
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3213
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 888
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1582
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10002
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3932
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.508279539713725e-5
allele num: 28504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2030
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 338
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.398e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

DP
type: SiteQuality
SIO_000300: 7.16877e5

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

FS
type: SiteQuality
SIO_000300: 3.274e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e0

QD
type: SiteQuality
SIO_000300: 1.29e1

VQSLOD
type: SiteQuality
SIO_000300: -6.58e-2

GenotypeQuality
all individuals: 2633
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4365
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17538
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1994
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 308
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 601
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3178
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1057
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3336
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.924557351809084e-4
allele num: 5196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1922
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3876
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 336
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-2

QD
type: SiteQuality
SIO_000300: 1.203e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.72e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.067e0

DP
type: SiteQuality
SIO_000300: 7.12287e5

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 433
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16359
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1245
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3090
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1656
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4938
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1998
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 3307
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2415
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9860
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 3.08641975308642e-3
allele num: 324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 1.111934766493699e-4
allele num: 26980
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 5.512679162072767e-4
allele num: 1814
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5092
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3774
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

VQSLOD
type: SiteQuality
SIO_000300: -1.146e0

FS
type: SiteQuality
SIO_000300: 3.293e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.53e-2

DP
type: SiteQuality
SIO_000300: 7.07759e5

MQ
type: SiteQuality
SIO_000300: 5.862e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.92e-1

QD
type: SiteQuality
SIO_000300: 1.345e1

GenotypeQuality
all individuals: 962
bin: 7.75e1
variant carriers: 525

GenotypeQuality
all individuals: 3895
bin: 1.25e1
variant carriers: 507

GenotypeQuality
all individuals: 561
bin: 7.25e1
variant carriers: 266

GenotypeQuality
all individuals: 1117
bin: 3.75e1
variant carriers: 294

GenotypeQuality
all individuals: 6158
bin: 2.5e0
variant carriers: 49

GenotypeQuality
all individuals: 622
bin: 5.25e1
variant carriers: 464

GenotypeQuality
all individuals: 4326
bin: 1.75e1
variant carriers: 983

GenotypeQuality
all individuals: 683
bin: 4.75e1
variant carriers: 347

GenotypeQuality
all individuals: 889
bin: 6.75e1
variant carriers: 270

GenotypeQuality
all individuals: 9035
bin: 2.25e1
variant carriers: 943

GenotypeQuality
all individuals: 601
bin: 5.75e1
variant carriers: 554

GenotypeQuality
all individuals: 10637
bin: 9.75e1
variant carriers: 10070

GenotypeQuality
all individuals: 1954
bin: 6.25e1
variant carriers: 513

GenotypeQuality
all individuals: 897
bin: 8.75e1
variant carriers: 756

African
type: Population
allele count: 1445
allele frequency: 2.950183748468763e-1
allele num: 4898
num of homozygotes: 204

Latino
type: Population
allele count: 495
allele frequency: 2.981927710843373e-1
allele num: 1660
num of homozygotes: 53

Other
type: Population
allele count: 79
allele frequency: 2.484276729559748e-1
allele num: 318
num of homozygotes: 14

European (Non-Finnish)
type: Population
allele count: 5122
allele frequency: 2.02482605945604e-1
allele num: 25296
num of homozygotes: 443

South Asian
type: Population
allele count: 3330
allele frequency: 3.384146341463415e-1
allele num: 9840
num of homozygotes: 568

East Asian
type: Population
allele count: 1987
allele frequency: 5.431930016402405e-1
allele num: 3658
num of homozygotes: 511

European (Finnish)
type: Population
allele count: 346
allele frequency: 2.485632183908046e-1
allele num: 1392
num of homozygotes: 37

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

DP
type: SiteQuality
SIO_000300: 7.107e5

MQ
type: SiteQuality
SIO_000300: 5.82e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.44e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.661e1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

GenotypeQuality
all individuals: 962
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9035
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6158
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 889
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1954
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4326
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10637
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1047
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2182
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 897
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1392
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.953194180898166e-5
allele num: 25296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3658
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.82e1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

DP
type: SiteQuality
SIO_000300: 7.107e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.44e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

QD
type: SiteQuality
SIO_000300: 1.661e1

GenotypeQuality
all individuals: 607
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2822
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1711
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13816
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 1936
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12558
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4752
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24154
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1274
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3446
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.338688085676037e-3
allele num: 1494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 300
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 4.028e0

VQSLOD
type: SiteQuality
SIO_000300: -3.817e-1

QD
type: SiteQuality
SIO_000300: 1.733e1

DP
type: SiteQuality
SIO_000300: 6.88486e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.99e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.22e-1

GenotypeQuality
all individuals: 609
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10237
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 722
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2766
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3305
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13137
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 761
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1605
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1719
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 973
bin: 6.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3270
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 3.916789973017669e-4
allele num: 22978
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.89738e5

MQ
type: SiteQuality
SIO_000300: 5.843e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.47e-2

FS
type: SiteQuality
SIO_000300: 9.202999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.366e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.257e0

GenotypeQuality
all individuals: 542
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.812e0

FS
type: SiteQuality
SIO_000300: 3.625e0

MQ
type: SiteQuality
SIO_000300: 4.214e1

QD
type: SiteQuality
SIO_000300: 5.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.73e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.837e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.16e-1

DP
type: SiteQuality
SIO_000300: 5.59691e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e-1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.597073e6

FS
type: SiteQuality
SIO_000300: 6.1e-1

QD
type: SiteQuality
SIO_000300: 8.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.831e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.67e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.3e-2

MQ
type: SiteQuality
SIO_000300: 4.408e1

VQSLOD
type: SiteQuality
SIO_000300: -1.961e0

GenotypeQuality
all individuals: 455
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54707
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 186
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 2
allele frequency: 1.226391954868776e-4
allele num: 16308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65846
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.05e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.86e-1

QD
type: SiteQuality
SIO_000300: 4.61e0

MQ
type: SiteQuality
SIO_000300: 4.429e1

FS
type: SiteQuality
SIO_000300: 1.983e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.059e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

DP
type: SiteQuality
SIO_000300: 5.989929e6

GenotypeQuality
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bin: 9.75e1
variant carriers: 26392

GenotypeQuality
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bin: 8.25e1
variant carriers: 161

GenotypeQuality
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bin: 5.75e1
variant carriers: 161

European (Non-Finnish)
type: Population
allele count: 15812
allele frequency: 2.401360750842876e-1
allele num: 65846
num of homozygotes: 0

Latino
type: Population
allele count: 2342
allele frequency: 2.054025609542185e-1
allele num: 11402
num of homozygotes: 0

African
type: Population
allele count: 3155
allele frequency: 3.062512133566298e-1
allele num: 10302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1663
allele frequency: 2.545148454239363e-1
allele num: 6534
num of homozygotes: 0

South Asian
type: Population
allele count: 3234
allele frequency: 1.983075791022811e-1
allele num: 16308
num of homozygotes: 0

Other
type: Population
allele count: 211
allele frequency: 2.370786516853933e-1
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 2072
allele frequency: 2.430213464696223e-1
allele num: 8526
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.429e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.059e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.86e-1

FS
type: SiteQuality
SIO_000300: 1.983e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.97e-1

DP
type: SiteQuality
SIO_000300: 5.989929e6

QD
type: SiteQuality
SIO_000300: 4.61e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.915e0

VQSLOD
type: SiteQuality
SIO_000300: -3.155e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

FS
type: SiteQuality
SIO_000300: 1.4281e1

QD
type: SiteQuality
SIO_000300: 2.09e0

MQRankSum
type: SiteQuality
SIO_000300: -1.221e0

DP
type: SiteQuality
SIO_000300: 6.102301e6

MQ
type: SiteQuality
SIO_000300: 4.548e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.12e-1

GenotypeQuality
all individuals: 394
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 7.25e1
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GenotypeQuality
all individuals: 14
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.602e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

FS
type: SiteQuality
SIO_000300: 1.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.186e0

MQRankSum
type: SiteQuality
SIO_000300: 2.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.92e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.709e0

QD
type: SiteQuality
SIO_000300: 1.156e1

DP
type: SiteQuality
SIO_000300: 6.102411e6

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
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GenotypeQuality
all individuals: 240
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.593e0

MQ
type: SiteQuality
SIO_000300: 4.538e1

MQRankSum
type: SiteQuality
SIO_000300: 4.38e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.663e0

FS
type: SiteQuality
SIO_000300: 1.174e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.065e0

DP
type: SiteQuality
SIO_000300: 6.102672e6

QD
type: SiteQuality
SIO_000300: 1.116e1

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 24

GenotypeQuality
all individuals: 326
bin: 8.75e1
variant carriers: 52

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 33

Latino
type: Population
allele count: 2450
allele frequency: 2.12636695018226e-1
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
allele count: 2135
allele frequency: 2.484869646182495e-1
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 3219
allele frequency: 3.110746037881716e-1
allele num: 10348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16359
allele frequency: 2.463333835265773e-1
allele num: 66410
num of homozygotes: 0

South Asian
type: Population
allele count: 3319
allele frequency: 2.022547227300427e-1
allele num: 16410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1722
allele frequency: 2.617021276595745e-1
allele num: 6580
num of homozygotes: 0

Other
type: Population
allele count: 213
allele frequency: 2.356194690265487e-1
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.172e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-1

FS
type: SiteQuality
SIO_000300: 7.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.816e0

MQRankSum
type: SiteQuality
SIO_000300: -1.608e0

DP
type: SiteQuality
SIO_000300: 7.157634e6

VQSLOD
type: SiteQuality
SIO_000300: 2.905e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.196e0

MQ
type: SiteQuality
SIO_000300: 4.472e1

GenotypeQuality
all individuals: 203
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.717e0

QD
type: SiteQuality
SIO_000300: 1.066e1

FS
type: SiteQuality
SIO_000300: 5.612e0

DP
type: SiteQuality
SIO_000300: 7.200531e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.7e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.366e0

MQ
type: SiteQuality
SIO_000300: 4.474e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.207e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.66e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 29

GenotypeQuality
all individuals: 84
bin: 3.25e1
variant carriers: 46

GenotypeQuality
all individuals: 318
bin: 8.75e1
variant carriers: 40

European (Non-Finnish)
type: Population
allele count: 16354
allele frequency: 2.463693883699909e-1
allele num: 66380
num of homozygotes: 0

South Asian
type: Population
allele count: 3322
allele frequency: 2.025115825408437e-1
allele num: 16404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1721
allele frequency: 2.615501519756839e-1
allele num: 6580
num of homozygotes: 0

East Asian
type: Population
allele count: 2133
allele frequency: 2.485434630622232e-1
allele num: 8582
num of homozygotes: 0

Latino
type: Population
allele count: 2448
allele frequency: 2.1235253296322e-1
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 3221
allele frequency: 3.113280494877247e-1
allele num: 10346
num of homozygotes: 0

Other
type: Population
allele count: 213
allele frequency: 2.356194690265487e-1
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.891e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.175e-1

MQ
type: SiteQuality
SIO_000300: 4.477e1

DP
type: SiteQuality
SIO_000300: 7.606418e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.16e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.104e0

QD
type: SiteQuality
SIO_000300: 4.83e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.756e0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
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allele num: 11578
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 4.575e1

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.15e-2

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
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allele num: 11578
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.97e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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East Asian
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allele num: 8654
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Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
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MQ
type: SiteQuality
SIO_000300: 4.527e1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-2

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

African
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.538e0

MQ
type: SiteQuality
SIO_000300: 4.58e1

FS
type: SiteQuality
SIO_000300: 2.1587e1

MQRankSum
type: SiteQuality
SIO_000300: -1.422e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

QD
type: SiteQuality
SIO_000300: 1.78e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.52e0

VQSLOD
type: SiteQuality
SIO_000300: -7.628e0

DP
type: SiteQuality
SIO_000300: 7.247257e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495324862143371e-5
allele num: 66736
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.879e0

VQSLOD
type: SiteQuality
SIO_000300: -2.093e0

QD
type: SiteQuality
SIO_000300: 1.95e0

MQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.01e-1

MQ
type: SiteQuality
SIO_000300: 4.592e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.99e-1

DP
type: SiteQuality
SIO_000300: 7.247399e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 3.895948213857588e-4
allele num: 66736
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.01e-1

MQ
type: SiteQuality
SIO_000300: 4.631e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

DP
type: SiteQuality
SIO_000300: 7.249494e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

QD
type: SiteQuality
SIO_000300: 8.23e0

VQSLOD
type: SiteQuality
SIO_000300: -9.313e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 8

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.198753296571566e-4
allele num: 66736
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.01e-1

MQ
type: SiteQuality
SIO_000300: 4.631e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.23e0

DP
type: SiteQuality
SIO_000300: 7.249494e6

VQSLOD
type: SiteQuality
SIO_000300: -9.313e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
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VQSLOD
type: SiteQuality
SIO_000300: -1.516e0

DP
type: SiteQuality
SIO_000300: 7.247895e6

MQRankSum
type: SiteQuality
SIO_000300: 5.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.33e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.045e1

MQ
type: SiteQuality
SIO_000300: 4.662e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.04e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 13

GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.198789222884886e-4
allele num: 66734
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.737247353224255e-4
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.81e-1

QD
type: SiteQuality
SIO_000300: 1.37e0

DP
type: SiteQuality
SIO_000300: 7.248991e6

FS
type: SiteQuality
SIO_000300: 7.48e-1

MQ
type: SiteQuality
SIO_000300: 4.629e1

MQRankSum
type: SiteQuality
SIO_000300: -4.215e0

VQSLOD
type: SiteQuality
SIO_000300: -3.907e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.56e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 0
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variant carriers: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.622140050843541e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.762e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.328e0

FS
type: SiteQuality
SIO_000300: 2.452e0

MQ
type: SiteQuality
SIO_000300: 4.628e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.131e0

MQRankSum
type: SiteQuality
SIO_000300: -9.5e-2

QD
type: SiteQuality
SIO_000300: 9.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.62e-1

DP
type: SiteQuality
SIO_000300: 7.248289e6

GenotypeQuality
all individuals: 3
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variant carriers: 3

GenotypeQuality
all individuals: 1
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variant carriers: 1

GenotypeQuality
all individuals: 324
bin: 8.75e1
variant carriers: 1

African
type: Population
allele count: 257
allele frequency: 2.469729002498559e-2
allele num: 10406
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 599
allele frequency: 9.056546719080738e-2
allele num: 6614
num of homozygotes: 12

Latino
type: Population
allele count: 704
allele frequency: 6.080497495249611e-2
allele num: 11578
num of homozygotes: 13

European (Non-Finnish)
type: Population
allele count: 7427
allele frequency: 1.11302601606522e-1
allele num: 66728
num of homozygotes: 239

East Asian
type: Population
allele count: 4
allele frequency: 4.622140050843541e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 574
allele frequency: 3.476259689922481e-2
allele num: 16512
num of homozygotes: 9

Other
type: Population
allele count: 89
allele frequency: 9.801762114537445e-2
allele num: 908
num of homozygotes: 2

MQRankSum
type: SiteQuality
SIO_000300: 6.47e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.83e-2

DP
type: SiteQuality
SIO_000300: 7.805282e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

QD
type: SiteQuality
SIO_000300: 1.128e1

MQ
type: SiteQuality
SIO_000300: 4.633e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 7.25e1
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GenotypeQuality
all individuals: 516
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.197e0

DP
type: SiteQuality
SIO_000300: 7.270829e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.919999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.462e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.75e-1

FS
type: SiteQuality
SIO_000300: 4.151e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.125e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 1.271e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 437
bin: 6.75e1
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GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.270813e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.771e0

VQSLOD
type: SiteQuality
SIO_000300: -2.255e0

MQRankSum
type: SiteQuality
SIO_000300: 7.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.488e0

QD
type: SiteQuality
SIO_000300: 7.82e0

FS
type: SiteQuality
SIO_000300: 3.181e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

MQ
type: SiteQuality
SIO_000300: 4.437e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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GenotypeQuality
all individuals: 467
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

VQSLOD
type: SiteQuality
SIO_000300: -1.8e0

FS
type: SiteQuality
SIO_000300: 1.584e0

DP
type: SiteQuality
SIO_000300: 7.270831e6

MQRankSum
type: SiteQuality
SIO_000300: 9.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQ
type: SiteQuality
SIO_000300: 4.708e1

QD
type: SiteQuality
SIO_000300: 1.021e1

GenotypeQuality
all individuals: 354
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495459585818323e-5
allele num: 66734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

DP
type: SiteQuality
SIO_000300: 7.27072e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.284e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.35e-1

MQ
type: SiteQuality
SIO_000300: 4.501e1

MQRankSum
type: SiteQuality
SIO_000300: 8.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.478e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.245e1

GenotypeQuality
all individuals: 605
bin: 6.75e1
variant carriers: 159

GenotypeQuality
all individuals: 281
bin: 7.5e0
variant carriers: 84

GenotypeQuality
all individuals: 707
bin: 8.25e1
variant carriers: 223

African
type: Population
allele count: 3011
allele frequency: 2.950225357632765e-1
allele num: 10206
num of homozygotes: 0

Other
type: Population
allele count: 184
allele frequency: 2.072072072072072e-1
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 2889
allele frequency: 1.791739022575043e-1
allele num: 16124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13814
allele frequency: 2.133897676717746e-1
allele num: 64736
num of homozygotes: 0

Latino
type: Population
allele count: 2075
allele frequency: 1.834984082065794e-1
allele num: 11308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1507
allele frequency: 2.345890410958904e-1
allele num: 6424
num of homozygotes: 0

East Asian
type: Population
allele count: 1830
allele frequency: 2.191616766467066e-1
allele num: 8350
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.582e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-2

FS
type: SiteQuality
SIO_000300: 1.755e0

QD
type: SiteQuality
SIO_000300: 3.16e0

MQRankSum
type: SiteQuality
SIO_000300: -1.409e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.173e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.702e-1

DP
type: SiteQuality
SIO_000300: 7.310907e6

VQSLOD
type: SiteQuality
SIO_000300: 2.071e1

GenotypeQuality
all individuals: 229
bin: 2.25e1
variant carriers: 103

GenotypeQuality
all individuals: 277
bin: 4.25e1
variant carriers: 153

GenotypeQuality
all individuals: 611
bin: 8.75e1
variant carriers: 185

European (Finnish)
type: Population
allele count: 1504
allele frequency: 2.315270935960591e-1
allele num: 6496
num of homozygotes: 0

African
type: Population
allele count: 3009
allele frequency: 2.924766718506999e-1
allele num: 10288
num of homozygotes: 0

Latino
type: Population
allele count: 2079
allele frequency: 1.82496488764045e-1
allele num: 11392
num of homozygotes: 0

East Asian
type: Population
allele count: 1831
allele frequency: 2.1632797731569e-1
allele num: 8464
num of homozygotes: 0

South Asian
type: Population
allele count: 2883
allele frequency: 1.764813907933399e-1
allele num: 16336
num of homozygotes: 0

Other
type: Population
allele count: 184
allele frequency: 2.053571428571428e-1
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13769
allele frequency: 2.102073219138347e-1
allele num: 65502
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.504e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.253e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-1

FS
type: SiteQuality
SIO_000300: 3.065e0

DP
type: SiteQuality
SIO_000300: 6.951459e6

VQSLOD
type: SiteQuality
SIO_000300: 2.018e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.608e0

QD
type: SiteQuality
SIO_000300: 3.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.659e-1

MQ
type: SiteQuality
SIO_000300: 4.648e1

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e0

QD
type: SiteQuality
SIO_000300: 7.4e0

MQRankSum
type: SiteQuality
SIO_000300: -4.18e-1

DP
type: SiteQuality
SIO_000300: 6.861211e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.92e-1

FS
type: SiteQuality
SIO_000300: 1.323e0

MQ
type: SiteQuality
SIO_000300: 4.508e1

GenotypeQuality
all individuals: 244
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.832844574780059e-4
allele num: 16368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.943634596695821e-4
allele num: 10290
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.719207173194903e-4
allele num: 8476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.524436720631727e-5
allele num: 65598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.193e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.59e-1

DP
type: SiteQuality
SIO_000300: 6.778919e6

MQ
type: SiteQuality
SIO_000300: 4.677e1

FS
type: SiteQuality
SIO_000300: 4.491e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.611e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.5e0

VQSLOD
type: SiteQuality
SIO_000300: 2.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.19e-1

QD
type: SiteQuality
SIO_000300: 3.56e0

GenotypeQuality
all individuals: 754
bin: 7.75e1
variant carriers: 171

GenotypeQuality
all individuals: 235
bin: 5.75e1
variant carriers: 131

GenotypeQuality
all individuals: 745
bin: 6.75e1
variant carriers: 161

Latino
type: Population
allele count: 2065
allele frequency: 1.813312258517738e-1
allele num: 11388
num of homozygotes: 0

Other
type: Population
allele count: 184
allele frequency: 2.053571428571428e-1
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 1823
allele frequency: 2.150778669183577e-1
allele num: 8476
num of homozygotes: 0

South Asian
type: Population
allele count: 2877
allele frequency: 1.757697947214076e-1
allele num: 16368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1505
allele frequency: 2.312538414259373e-1
allele num: 6508
num of homozygotes: 0

African
type: Population
allele count: 2976
allele frequency: 2.892128279883382e-1
allele num: 10290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13686
allele frequency: 2.086344095856581e-1
allele num: 65598
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.59e-1

QD
type: SiteQuality
SIO_000300: 3.56e0

DP
type: SiteQuality
SIO_000300: 6.778919e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.193e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.611e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.5e0

VQSLOD
type: SiteQuality
SIO_000300: 2.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.19e-1

FS
type: SiteQuality
SIO_000300: 4.491e0

MQ
type: SiteQuality
SIO_000300: 4.677e1

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

FS
type: SiteQuality
SIO_000300: 3.544e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

MQ
type: SiteQuality
SIO_000300: 4.909e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.209e0

MQRankSum
type: SiteQuality
SIO_000300: 2.56e0

QD
type: SiteQuality
SIO_000300: 1.503e1

VQSLOD
type: SiteQuality
SIO_000300: -3.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.432e0

DP
type: SiteQuality
SIO_000300: 5.922803e6

GenotypeQuality
all individuals: 624
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 3.843936190659235e-4
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 118
allele frequency: 1.768532118341776e-3
allele num: 66722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 19
allele frequency: 1.641043358092935e-3
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.477e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

DP
type: SiteQuality
SIO_000300: 5.923546e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.1e0

QD
type: SiteQuality
SIO_000300: 1.167e1

MQ
type: SiteQuality
SIO_000300: 4.816e1

GenotypeQuality
all individuals: 19106
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2764
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.767012687427913e-4
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

MQ
type: SiteQuality
SIO_000300: 5.93e1

FS
type: SiteQuality
SIO_000300: 1.625e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.271e1

DP
type: SiteQuality
SIO_000300: 2.294792e6

GenotypeQuality
all individuals: 19106
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1912
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

QD
type: SiteQuality
SIO_000300: 1.271e1

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

FS
type: SiteQuality
SIO_000300: 1.625e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.93e1

DP
type: SiteQuality
SIO_000300: 2.294792e6

GenotypeQuality
all individuals: 4700
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.996641880546894e-5
allele num: 66704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

QD
type: SiteQuality
SIO_000300: 8.949999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -2.565e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.69e-1

FS
type: SiteQuality
SIO_000300: 1.6512e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.297321e6

GenotypeQuality
all individuals: 20
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3757
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.3e-2

QD
type: SiteQuality
SIO_000300: 1.23e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.89e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

VQSLOD
type: SiteQuality
SIO_000300: 2.02e-1

FS
type: SiteQuality
SIO_000300: 1.302e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.64e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.18e-1

DP
type: SiteQuality
SIO_000300: 2.297459e6

GenotypeQuality
all individuals: 1917
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3592
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4709
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.874e0

DP
type: SiteQuality
SIO_000300: 2.297956e6

FS
type: SiteQuality
SIO_000300: 1.3381e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.105e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-1

QD
type: SiteQuality
SIO_000300: 1.064e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.79e-1