7-45141224-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141224
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141224
    reference: chr 7
allele count: 1
allele frequency: 8.6229197206174e-6
allele num: 115970
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2857-11C>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1238-11C>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1238-11C>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1568-11C>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.711-11C>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.472-11C>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1568-11C>G
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22501
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1407
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27193
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1597
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1734
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2976
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1128
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3905
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

7-45141245-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141245
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141245
    reference: chr 7
allele count: 3
allele frequency: 2.619538262722224e-5
allele num: 114524
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.472-32C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1238-32C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1568-32C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1238-32C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1568-32C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2857-32C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.711-32C>T
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19334
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10925
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11279
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9019
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3786
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4866
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2734
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 403
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 3553
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4455
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 1447
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/7-45141263-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141263
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141264
    reference: chr 7
allele count: 19
allele frequency: 1.682398569075743e-4
allele num: 112934
alternate allele: AC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2857-51dupG
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.472-51dupG
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1238-51dupG
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1568-51dupG
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1568-51dupG
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.711-51dupG
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1238-51dupG
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20839
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7972
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11977
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9411
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3101
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4864
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4518
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4239
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2093
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2850
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1652
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/7-45141263-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141263
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141262
    reference: chr 7
allele count: 2
allele frequency: 1.770945862184993e-5
allele num: 112934
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1238-51delG
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2857-51delG
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.711-51delG
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1568-51delG
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1238-51delG
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.472-51delG
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1568-51delG
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9411
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20839
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7972
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1029
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4239
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2850
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3101
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5528
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4864
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20819
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: AC
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/7-45141265-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141265
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141265
    reference: chr 7
allele count: 1
allele frequency: 8.810417437578192e-6
allele num: 113502
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1238-52G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.472-52G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.711-52G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1568-52G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2857-52G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1238-52G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1568-52G>T
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8706
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7754
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21110
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2936
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1872
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1944
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5332
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21928
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1918
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

7-45141265-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141265
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141265
    reference: chr 7
allele count: 1
allele frequency: 8.810417437578192e-6
allele num: 113502
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1568-52G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1238-52G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1238-52G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2857-52G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1568-52G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.472-52G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.711-52G>A
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8706
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7754
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2936
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4020
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4317
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1918
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1134
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1155
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum

7-45141373-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141373
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141373
    reference: chr 7
allele count: 3
allele frequency: 2.521262648334286e-5
allele num: 118988
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1567+51G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1567+51G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2856+51G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.471+51G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.710+51G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.641G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1237+51G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1237+51G>A
  variant of: http://identifiers.org/hgnc/17443
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6409
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5433
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5074
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7818
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1661
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2427
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35655
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

7-45141374-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141374
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141374
    reference: chr 7
allele count: 5
allele frequency: 4.203376151725065e-5
allele num: 118952
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.640C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1237+50C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1567+50C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.471+50C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2856+50C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.710+50C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1237+50C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1567+50C>T
  variant of: http://identifiers.org/hgnc/17443
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5073
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3984
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6408
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6770
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1611
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3320
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7894
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

7-45141380-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141380
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141380
    reference: chr 7
allele count: 3
allele frequency: 2.521347408054865e-5
allele num: 118984
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1567+44G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.471+44G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.710+44G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1567+44G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1237+44G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2856+44G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.634G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1237+44G>A
  variant of: http://identifiers.org/hgnc/17443
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5072
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2607
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6407
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35655
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1662
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

7-45141392-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141392
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141392
    reference: chr 7
allele count: 1
allele frequency: 8.406328283932143e-6
allele num: 118958
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1237+32G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1237+32G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.622G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1567+32G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.710+32G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.471+32G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1567+32G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2856+32G>A
  variant of: http://identifiers.org/hgnc/17443
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5073
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6128
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6404
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6556
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3301
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1610
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2416
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

7-45141395-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141395
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141395
    reference: chr 7
allele count: 618
allele frequency: 5.195984462493064e-3
allele num: 118938
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2856+29C>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1237+29C>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.710+29C>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.619C>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1237+29C>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.471+29C>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1567+29C>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1567+29C>A
  variant of: http://identifiers.org/hgnc/17443
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6763
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 5477
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6544
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 9.75e1
  variant carriers: 431
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 5429
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 8.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 7.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 6.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8203
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1608
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2417
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 35685
  bin: 9.75e1
  variant carriers: 615
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.25e1
  variant carriers: 1
num of homozygotes: 2
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

7-45141395-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141395
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141395
    reference: chr 7
allele count: 2
allele frequency: 1.681548369738856e-5
allele num: 118938
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1237+29C>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2856+29C>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.619C>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1567+29C>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.471+29C>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.710+29C>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1237+29C>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1567+29C>G
  variant of: http://identifiers.org/hgnc/17443
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6763
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6544
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6402
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5477
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1389
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1608
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8203
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3299
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/7-45141403-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141403
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141403
    reference: chr 7
allele count: 7
allele frequency: 5.889281507656066e-5
allele num: 118860
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.710+21G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.471+21G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1567+21G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1567+21G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.611G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1237+21G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2856+21G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1237+21G>T
  variant of: http://identifiers.org/hgnc/17443
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6449
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6573
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6180
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5105
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2711
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1249
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1624
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1660
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8263
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ

7-45141404-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141404
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141404
    reference: chr 7
allele count: 36
allele frequency: 3.027805345758549e-4
allele num: 118898
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.610G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1567+20G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1567+20G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1237+20G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.471+20G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2856+20G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.710+20G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1237+20G>A
  variant of: http://identifiers.org/hgnc/17443
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5505
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6573
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2825
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2770
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5105
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6451
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6810
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6180
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1240
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2437
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1662
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3322
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

7-45141406-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141406
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141406
    reference: chr 7
allele count: 4
allele frequency: 3.364737550471063e-5
allele num: 118880
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1567+18T>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1237+18T>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.608T>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2856+18T>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.471+18T>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1237+18T>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.710+18T>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1567+18T>C
  variant of: http://identifiers.org/hgnc/17443
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4012
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5479
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6810
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2713
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2437
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3328
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35435
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

7-45141407-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141407
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141407
    reference: chr 7
allele count: 1
allele frequency: 8.414108777598277e-6
allele num: 118848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.471+17G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1567+17G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2856+17G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.710+17G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1237+17G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.607G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1237+17G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1567+17G>A
  variant of: http://identifiers.org/hgnc/17443
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2786
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5479
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6576
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4012
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1220
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1664
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum

7-45141410-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141410
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141410
    reference: chr 7
allele count: 3
allele frequency: 2.523468254769355e-5
allele num: 118884
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1237+14C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.710+14C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1567+14C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1567+14C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1237+14C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2856+14C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.471+14C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.604C>T
  variant of: http://identifiers.org/hgnc/17443
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6450
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5105
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4012
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3327
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2434
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8336
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ

7-45141411-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141411
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141411
    reference: chr 7
allele count: 90
allele frequency: 7.570659488559892e-4
allele num: 118880
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1237+13C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.710+13C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1237+13C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.603C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1567+13C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.471+13C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2856+13C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1567+13C>T
  variant of: http://identifiers.org/hgnc/17443
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6448
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2846
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4012
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6812
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 9.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6180
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 8374
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35450
  bin: 9.75e1
  variant carriers: 87
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3328
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1661
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 1
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/7-45141415-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141415
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141415
    reference: chr 7
allele count: 1
allele frequency: 8.412409987213136e-6
allele num: 118872
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1237+9T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.710+9T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2856+9T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.599T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1567+9T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1567+9T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.471+9T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1237+9T>G
  variant of: http://identifiers.org/hgnc/17443
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5481
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5111
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5503
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1656
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2364
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8363
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/7-45141422-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141422
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141422
    reference: chr 7
allele count: 2
allele frequency: 1.684210526315789e-5
allele num: 118750
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1567+2T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.471+2T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1237+2T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1237+2T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1567+2T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.710+2T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2856+2T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.592T>G
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: splice donor
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5466
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5479
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2824
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6465
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6640
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5112
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1225
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1615
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35403
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1567+2T>G
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/7-45141429-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141429
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141429
    reference: chr 7
allele count: 126
allele frequency: 1.079247610237435e-3
allele num: 116748
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2851T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1562T>G
  hgvsp: ENSP00000258770.3:p.Val521Gly
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1562T>G
  hgvsp: ENSP00000420597.1:p.Val521Gly
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.705T>G
  hgvsp: ENSP00000417974.1:p.Val236Gly
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.585T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1232T>G
  hgvsp: ENSP00000354992.3:p.Val411Gly
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.466T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1232T>G
  hgvsp: ENSP00000379016.4:p.Val411Gly
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6656
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4020
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6818
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5485
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6460
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 9.75e1
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 5488
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5101
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8024
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1589
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2636
  bin: 9.25e1
  variant carriers: 1
hgvs: p.Val521Gly
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

7-45141441-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141441
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141441
    reference: chr 7
allele count: 1
allele frequency: 8.405480373203328e-6
allele num: 118970
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1220A>G
  hgvsp: ENSP00000379016.4:p.Gln407Arg
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1220A>G
  hgvsp: ENSP00000354992.3:p.Gln407Arg
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.573A>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.693A>G
  hgvsp: ENSP00000417974.1:p.Gln232Arg
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1550A>G
  hgvsp: ENSP00000258770.3:p.Gln517Arg
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.454A>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2839A>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1550A>G
  hgvsp: ENSP00000420597.1:p.Gln517Arg
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5472
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6439
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6817
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1397
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2696
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1657
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln517Arg
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/7-45141443-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141443
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141443
    reference: chr 7
allele count: 15
allele frequency: 1.261034047919294e-4
allele num: 118950
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2837G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.452G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.691G>T
  hgvsp: ENST00000483615.1:c.691G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1548G>T
  hgvsp: ENST00000494076.1:c.1548G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.571G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1548G>T
  hgvsp: ENST00000258770.3:c.1548G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1218G>T
  hgvsp: ENST00000361278.3:c.1218G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1218G>T
  hgvsp: ENST00000395655.4:c.1218G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8930
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr516Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum

7-45141443-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141443
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141443
    reference: chr 7
allele count: 3
allele frequency: 2.522068095838588e-5
allele num: 118950
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2837G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1218G>A
  hgvsp: ENST00000395655.4:c.1218G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1548G>A
  hgvsp: ENST00000258770.3:c.1548G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.691G>A
  hgvsp: ENST00000483615.1:c.691G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.452G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.571G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1218G>A
  hgvsp: ENST00000361278.3:c.1218G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1548G>A
  hgvsp: ENST00000494076.1:c.1548G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1338
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5662
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6441
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2336
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3469
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35008
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Thr516Thr
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

7-45141452-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141452
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141452
    reference: chr 7
allele count: 3
allele frequency: 2.522958926228681e-5
allele num: 118908
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.682G>A
  hgvsp: ENST00000483615.1:c.682G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2828G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.443G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1539G>A
  hgvsp: ENST00000258770.3:c.1539G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1209G>A
  hgvsp: ENST00000361278.3:c.1209G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1539G>A
  hgvsp: ENST00000494076.1:c.1539G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1209G>A
  hgvsp: ENST00000395655.4:c.1209G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.562G>A
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5453
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6873
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1605
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2695
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1639
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu513Glu
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

7-45141455-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141455
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141455
    reference: chr 7
allele count: 11
allele frequency: 9.249138148490709e-5
allele num: 118930
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2825C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1536C>T
  hgvsp: ENST00000258770.3:c.1536C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.679C>T
  hgvsp: ENST00000483615.1:c.679C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1536C>T
  hgvsp: ENST00000494076.1:c.1536C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.440C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1206C>T
  hgvsp: ENST00000361278.3:c.1206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.559C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1206C>T
  hgvsp: ENST00000395655.4:c.1206C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6814
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1336
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6888
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3395
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8887
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu512Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/7-45141459-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141459
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141459
    reference: chr 7
allele count: 1
allele frequency: 8.413684015683106e-6
allele num: 118854
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1202G>T
  hgvsp: ENSP00000379016.4:p.Ser401Ile
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.675G>T
  hgvsp: ENSP00000417974.1:p.Ser226Ile
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1532G>T
  hgvsp: ENSP00000258770.3:p.Ser511Ile
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1202G>T
  hgvsp: ENSP00000354992.3:p.Ser401Ile
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.555G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1532G>T
  hgvsp: ENSP00000420597.1:p.Ser511Ile
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.436G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2821G>T
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6814
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser511Ile
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP

7-45141459-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141459
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141459
    reference: chr 7
allele count: 1
allele frequency: 8.413684015683106e-6
allele num: 118854
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1532G>C
  hgvsp: ENSP00000420597.1:p.Ser511Thr
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1202G>C
  hgvsp: ENSP00000379016.4:p.Ser401Thr
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.675G>C
  hgvsp: ENSP00000417974.1:p.Ser226Thr
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.436G>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.555G>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2821G>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1532G>C
  hgvsp: ENSP00000258770.3:p.Ser511Thr
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1202G>C
  hgvsp: ENSP00000354992.3:p.Ser401Thr
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6814
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5441
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8662
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2694
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1575
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser511Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/7-45141469-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141469
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141469
    reference: chr 7
allele count: 1
allele frequency: 8.422045546422314e-6
allele num: 118736
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.545G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.665G>T
  hgvsp: ENSP00000417974.1:p.Asp223Tyr
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1522G>T
  hgvsp: ENSP00000258770.3:p.Asp508Tyr
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.426G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1522G>T
  hgvsp: ENSP00000420597.1:p.Asp508Tyr
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2811G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1192G>T
  hgvsp: ENSP00000354992.3:p.Asp398Tyr
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1192G>T
  hgvsp: ENSP00000379016.4:p.Asp398Tyr
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5364
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1603
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8391
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2408
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp508Tyr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum

7-45141469-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141469
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141469
    reference: chr 7
allele count: 5
allele frequency: 4.211022773211158e-5
allele num: 118736
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.665G>A
  hgvsp: ENSP00000417974.1:p.Asp223Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1522G>A
  hgvsp: ENSP00000420597.1:p.Asp508Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.545G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.426G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1192G>A
  hgvsp: ENSP00000354992.3:p.Asp398Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2811G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1522G>A
  hgvsp: ENSP00000258770.3:p.Asp508Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1192G>A
  hgvsp: ENSP00000379016.4:p.Asp398Asn
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5364
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6806
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6208
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8391
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1637
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp508Asn
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

7-45141470-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141470
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141470
    reference: chr 7
allele count: 2
allele frequency: 1.683643404326963e-5
allele num: 118790
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.425C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1191C>T
  hgvsp: ENST00000395655.4:c.1191C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2810C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1521C>T
  hgvsp: ENST00000494076.1:c.1521C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1521C>T
  hgvsp: ENST00000258770.3:c.1521C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1191C>T
  hgvsp: ENST00000361278.3:c.1191C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.664C>T
  hgvsp: ENST00000483615.1:c.664C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.544C>T
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2829
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5362
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5295
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2404
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34968
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3221
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala507Ala
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum

7-45141472-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141472
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141472
    reference: chr 7
allele count: 2
allele frequency: 1.684380737421887e-5
allele num: 118738
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.423G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.542G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1189G>A
  hgvsp: ENSP00000379016.4:p.Ala397Thr
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1189G>A
  hgvsp: ENSP00000354992.3:p.Ala397Thr
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1519G>A
  hgvsp: ENSP00000258770.3:p.Ala507Thr
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2808G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.662G>A
  hgvsp: ENSP00000417974.1:p.Ala222Thr
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1519G>A
  hgvsp: ENSP00000420597.1:p.Ala507Thr
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5344
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4054
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6396
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6207
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6807
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2272
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala507Thr
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ

7-45141473-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141473
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141473
    reference: chr 7
allele count: 4
allele frequency: 3.36915872106735e-5
allele num: 118724
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2807C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.422C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1518C>T
  hgvsp: ENST00000258770.3:c.1518C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.661C>T
  hgvsp: ENST00000483615.1:c.661C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1188C>T
  hgvsp: ENST00000361278.3:c.1188C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.541C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1518C>T
  hgvsp: ENST00000494076.1:c.1518C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1188C>T
  hgvsp: ENST00000395655.4:c.1188C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5334
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6391
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6805
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34957
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1669
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser506Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

7-45141481-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141481
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141481
    reference: chr 7
allele count: 1
allele frequency: 8.421903687109433e-6
allele num: 118738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.653C>T
  hgvsp: ENST00000483615.1:c.653C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1510C>T
  hgvsp: ENST00000258770.3:c.1510C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.414C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1180C>T
  hgvsp: ENST00000395655.4:c.1180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1180C>T
  hgvsp: ENST00000361278.3:c.1180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1510C>T
  hgvsp: ENST00000494076.1:c.1510C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2799C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.533C>T
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6376
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2684
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3173
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2255
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu504Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: G
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff

7-45141485-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141485
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141485
    reference: chr 7
allele count: 1
allele frequency: 8.425735566714975e-6
allele num: 118684
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1176G>A
  hgvsp: ENST00000361278.3:c.1176G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.649G>A
  hgvsp: ENST00000483615.1:c.649G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.529G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2795G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1176G>A
  hgvsp: ENST00000395655.4:c.1176G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.410G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1506G>A
  hgvsp: ENST00000258770.3:c.1506G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1506G>A
  hgvsp: ENST00000494076.1:c.1506G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6651
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2237
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2684
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly502Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD

7-45141494-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141494
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141494
    reference: chr 7
allele count: 1
allele frequency: 8.438391305081599e-6
allele num: 118506
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1497G>A
  hgvsp: ENST00000258770.3:c.1497G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.401G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1167G>A
  hgvsp: ENST00000361278.3:c.1167G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1497G>A
  hgvsp: ENST00000494076.1:c.1497G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1167G>A
  hgvsp: ENST00000395655.4:c.1167G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.520G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2786G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.640G>A
  hgvsp: ENST00000483615.1:c.640G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6367
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5099
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2229
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3068
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34938
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Thr499Thr
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

7-45141495-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141495
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141495
    reference: chr 7
allele count: 2
allele frequency: 1.688504660272862e-5
allele num: 118448
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1166C>T
  hgvsp: ENSP00000354992.3:p.Thr389Met
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1166C>T
  hgvsp: ENSP00000379016.4:p.Thr389Met
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1496C>T
  hgvsp: ENSP00000258770.3:p.Thr499Met
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.639C>T
  hgvsp: ENSP00000417974.1:p.Thr214Met
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.400C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1496C>T
  hgvsp: ENSP00000420597.1:p.Thr499Met
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.519C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2785C>T
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6444
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5055
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6362
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3542
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2028
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1575
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr499Met
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

7-45141513-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141513
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141513
    reference: chr 7
allele count: 1
allele frequency: 8.476300264460568e-6
allele num: 117976
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1148A>C
  hgvsp: ENSP00000379016.4:p.Gln383Pro
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1478A>C
  hgvsp: ENSP00000420597.1:p.Gln493Pro
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1148A>C
  hgvsp: ENSP00000354992.3:p.Gln383Pro
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1478A>C
  hgvsp: ENSP00000258770.3:p.Gln493Pro
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.501A>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.621A>C
  hgvsp: ENSP00000417974.1:p.Gln208Pro
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.382A>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2767A>C
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6199
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6795
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5150
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5929
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5261
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2293
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1571
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2680
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gln493Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

7-45141521-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141521
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141521
    reference: chr 7
allele count: 2
allele frequency: 1.700188720948025e-5
allele num: 117634
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.613C>T
  hgvsp: ENST00000483615.1:c.613C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1470C>T
  hgvsp: ENST00000494076.1:c.1470C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1470C>T
  hgvsp: ENST00000258770.3:c.1470C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1140C>T
  hgvsp: ENST00000361278.3:c.1140C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1140C>T
  hgvsp: ENST00000395655.4:c.1140C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.374C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2759C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.493C>T
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5714
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4760
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5231
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8009
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2671
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr490Thr
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

7-45141522-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141522
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141522
    reference: chr 7
allele count: 1
allele frequency: 8.507018290089324e-6
allele num: 117550
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1469C>A
  hgvsp: ENSP00000258770.3:p.Thr490Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.373C>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1139C>A
  hgvsp: ENSP00000354992.3:p.Thr380Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.612C>A
  hgvsp: ENSP00000417974.1:p.Thr205Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1139C>A
  hgvsp: ENSP00000379016.4:p.Thr380Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2758C>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.492C>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1469C>A
  hgvsp: ENSP00000420597.1:p.Thr490Asn
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2174
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1487
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2672
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr490Asn
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

7-45141523-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141523
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141523
    reference: chr 7
allele count: 3
allele frequency: 2.554539416543197e-5
allele num: 117438
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1138A>T
  hgvsp: ENSP00000379016.4:p.Thr380Ser
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.611A>T
  hgvsp: ENSP00000417974.1:p.Thr205Ser
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.372A>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1138A>T
  hgvsp: ENSP00000354992.3:p.Thr380Ser
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1468A>T
  hgvsp: ENSP00000420597.1:p.Thr490Ser
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.491A>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1468A>T
  hgvsp: ENSP00000258770.3:p.Thr490Ser
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2757A>T
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6790
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5146
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34914
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2347
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1486
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr490Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

7-45141531-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141531
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141531
    reference: chr 7
allele count: 1
allele frequency: 8.575446780777278e-6
allele num: 116612
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.364G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.603G>A
  hgvsp: ENSP00000417974.1:p.Arg202Lys
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.483G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2749G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1460G>A
  hgvsp: ENSP00000258770.3:p.Arg487Lys
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1130G>A
  hgvsp: ENSP00000354992.3:p.Arg377Lys
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1130G>A
  hgvsp: ENSP00000379016.4:p.Arg377Lys
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1460G>A
  hgvsp: ENSP00000420597.1:p.Arg487Lys
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2073
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4597
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5213
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2162
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2660
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg487Lys
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

7-45141533-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141533
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141533
    reference: chr 7
allele count: 1
allele frequency: 8.573976267233693e-6
allele num: 116632
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.481C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1458C>T
  hgvsp: ENST00000494076.1:c.1458C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1128C>T
  hgvsp: ENST00000361278.3:c.1128C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2747C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1458C>T
  hgvsp: ENST00000258770.3:c.1458C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.362C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1128C>T
  hgvsp: ENST00000395655.4:c.1128C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.601C>T
  hgvsp: ENST00000483615.1:c.601C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5176
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2162
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34914
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2980
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asp486Asp
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

7-45141535-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141535
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141535
    reference: chr 7
allele count: 2
allele frequency: 1.715001114750725e-5
allele num: 116618
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2745G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1456G>A
  hgvsp: ENSP00000258770.3:p.Asp486Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.360G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1456G>A
  hgvsp: ENSP00000420597.1:p.Asp486Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.599G>A
  hgvsp: ENSP00000417974.1:p.Asp201Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1126G>A
  hgvsp: ENSP00000379016.4:p.Asp376Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1126G>A
  hgvsp: ENSP00000354992.3:p.Asp376Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.479G>A
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2673
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3093
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7246
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp486Asn
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

7-45141543-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141543
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141543
    reference: chr 7
allele count: 1
allele frequency: 8.62857438693979e-6
allele num: 115894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2737C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1118C>T
  hgvsp: ENSP00000379016.4:p.Ser373Leu
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1118C>T
  hgvsp: ENSP00000354992.3:p.Ser373Leu
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1448C>T
  hgvsp: ENSP00000258770.3:p.Ser483Leu
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.591C>T
  hgvsp: ENSP00000417974.1:p.Ser198Leu
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.352C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1448C>T
  hgvsp: ENSP00000420597.1:p.Ser483Leu
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.471C>T
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1566
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3511
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34914
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1448
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2554
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser483Leu
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/7-45141548-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141548
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141548
    reference: chr 7
allele count: 1
allele frequency: 8.654561819535076e-6
allele num: 115546
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1113G>T
  hgvsp: ENST00000395655.4:c.1113G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1443G>T
  hgvsp: ENST00000494076.1:c.1443G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.347G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1113G>T
  hgvsp: ENST00000361278.3:c.1113G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1443G>T
  hgvsp: ENST00000258770.3:c.1443G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2732G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.586G>T
  hgvsp: ENST00000483615.1:c.586G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.466G>T
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3706
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2152
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1564
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly481Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

7-45141553-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141553
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141553
    reference: chr 7
allele count: 2
allele frequency: 1.736955464461891e-5
allele num: 115144
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1438C>T
  hgvsp: ENSP00000258770.3:p.Pro480Ser
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.461C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.581C>T
  hgvsp: ENSP00000417974.1:p.Pro195Ser
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2727C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1108C>T
  hgvsp: ENSP00000379016.4:p.Pro370Ser
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1108C>T
  hgvsp: ENSP00000354992.3:p.Pro370Ser
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1438C>T
  hgvsp: ENSP00000420597.1:p.Pro480Ser
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.342C>T
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1436
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6147
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro480Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

7-45141554-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141554
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141554
    reference: chr 7
allele count: 2
allele frequency: 1.741159263837863e-5
allele num: 114866
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.341C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1107C>T
  hgvsp: ENST00000361278.3:c.1107C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.460C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1107C>T
  hgvsp: ENST00000395655.4:c.1107C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1437C>T
  hgvsp: ENST00000258770.3:c.1437C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.580C>T
  hgvsp: ENST00000483615.1:c.580C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2726C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1437C>T
  hgvsp: ENST00000494076.1:c.1437C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3117
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2801
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2443
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3929
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2342
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala479Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

7-45141555-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141555
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141555
    reference: chr 7
allele count: 1
allele frequency: 8.711256685889507e-6
allele num: 114794
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.579C>T
  hgvsp: ENSP00000417974.1:p.Ala194Val
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2725C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.340C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.459C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1106C>T
  hgvsp: ENSP00000354992.3:p.Ala369Val
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1436C>T
  hgvsp: ENSP00000258770.3:p.Ala479Val
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1436C>T
  hgvsp: ENSP00000420597.1:p.Ala479Val
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1106C>T
  hgvsp: ENSP00000379016.4:p.Ala369Val
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34915
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5853
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala479Val
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

7-45141555-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141555
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141555
    reference: chr 7
allele count: 2
allele frequency: 1.742251337177901e-5
allele num: 114794
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1436C>G
  hgvsp: ENSP00000258770.3:p.Ala479Gly
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1106C>G
  hgvsp: ENSP00000379016.4:p.Ala369Gly
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.459C>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1436C>G
  hgvsp: ENSP00000420597.1:p.Ala479Gly
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1106C>G
  hgvsp: ENSP00000354992.3:p.Ala369Gly
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.340C>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.579C>G
  hgvsp: ENSP00000417974.1:p.Ala194Gly
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2725C>G
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6315
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2342
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala479Gly
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

7-45141559-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141559
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141559
    reference: chr 7
allele count: 1
allele frequency: 8.736981896973509e-6
allele num: 114456
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.336G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1432G>A
  hgvsp: ENSP00000258770.3:p.Val478Met
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1432G>A
  hgvsp: ENSP00000420597.1:p.Val478Met
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.455G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2721G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1102G>A
  hgvsp: ENSP00000354992.3:p.Val368Met
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1102G>A
  hgvsp: ENSP00000379016.4:p.Val368Met
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.575G>A
  hgvsp: ENSP00000417974.1:p.Val193Met
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6794
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4049
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4101
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34913
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val478Met
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

7-45141563-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141563
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141563
    reference: chr 7
allele count: 9
allele frequency: 7.87884093495579e-5
allele num: 114230
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.571G>A
  hgvsp: ENST00000483615.1:c.571G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1098G>A
  hgvsp: ENST00000361278.3:c.1098G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1098G>A
  hgvsp: ENST00000395655.4:c.1098G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2717G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1428G>A
  hgvsp: ENST00000494076.1:c.1428G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.451G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1428G>A
  hgvsp: ENST00000258770.3:c.1428G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.332G>A
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6794
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3043
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4232
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2676
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser476Ser
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

7-45141564-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141564
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141564
    reference: chr 7
allele count: 3
allele frequency: 2.628351147713334e-5
allele num: 114140
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1427C>T
  hgvsp: ENSP00000420597.1:p.Ser476Leu
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.570C>T
  hgvsp: ENSP00000417974.1:p.Ser191Leu
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.331C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.450C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2716C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1427C>T
  hgvsp: ENSP00000258770.3:p.Ser476Leu
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1097C>T
  hgvsp: ENSP00000354992.3:p.Ser366Leu
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1097C>T
  hgvsp: ENSP00000379016.4:p.Ser366Leu
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2905
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4341
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3731
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6794
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34913
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2360
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser476Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum

7-45141584-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141584
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141584
    reference: chr 7
allele count: 9
allele frequency: 8.002418508704853e-5
allele num: 112466
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1077G>A
  hgvsp: ENST00000395655.4:c.1077G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.430G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.550G>A
  hgvsp: ENST00000483615.1:c.550G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2696G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1407G>A
  hgvsp: ENST00000258770.3:c.1407G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1077G>A
  hgvsp: ENST00000361278.3:c.1077G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.311G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1407G>A
  hgvsp: ENST00000494076.1:c.1407G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 924
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2944
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5045
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4370
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2677
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2345
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser469Ser
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

7-45141592-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141592
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141592
    reference: chr 7
allele count: 3
allele frequency: 2.683891284510369e-5
allele num: 111778
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1399G>A
  hgvsp: ENSP00000258770.3:p.Glu467Lys
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.303G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1069G>A
  hgvsp: ENSP00000379016.4:p.Glu357Lys
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.542G>A
  hgvsp: ENSP00000417974.1:p.Glu182Lys
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1399G>A
  hgvsp: ENSP00000420597.1:p.Glu467Lys
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2688G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.422G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1069G>A
  hgvsp: ENSP00000354992.3:p.Glu357Lys
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2737
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3572
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6202
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1406
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5022
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu467Lys
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

7-45141593-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141593
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141593
    reference: chr 7
allele count: 1
allele frequency: 8.943743851176102e-6
allele num: 111810
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1068C>T
  hgvsp: ENST00000361278.3:c.1068C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2687C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1398C>T
  hgvsp: ENST00000494076.1:c.1398C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.541C>T
  hgvsp: ENST00000483615.1:c.541C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.421C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1398C>T
  hgvsp: ENST00000258770.3:c.1398C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1068C>T
  hgvsp: ENST00000395655.4:c.1068C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.302C>T
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3608
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2714
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6317
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2344
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2679
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2277
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro466Pro
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

7-45141597-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141597
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141597
    reference: chr 7
allele count: 10
allele frequency: 8.963143553707156e-5
allele num: 111568
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2683A>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1394A>G
  hgvsp: ENSP00000420597.1:p.Tyr465Cys
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1394A>G
  hgvsp: ENSP00000258770.3:p.Tyr465Cys
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.298A>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1064A>G
  hgvsp: ENSP00000379016.4:p.Tyr355Cys
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.537A>G
  hgvsp: ENSP00000417974.1:p.Tyr180Cys
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1064A>G
  hgvsp: ENSP00000354992.3:p.Tyr355Cys
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.417A>G
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4301
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3690
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5076
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34909
  bin: 9.75e1
  variant carriers: 10
hgvs: p.Tyr465Cys
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: T
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

7-45141616-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141616
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141616
    reference: chr 7
allele count: 4
allele frequency: 3.618141360782966e-5
allele num: 110554
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.279G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1375G>A
  hgvsp: ENSP00000258770.3:p.Ala459Thr
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.518G>A
  hgvsp: ENSP00000417974.1:p.Ala174Thr
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.398G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1045G>A
  hgvsp: ENSP00000354992.3:p.Ala349Thr
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1045G>A
  hgvsp: ENSP00000379016.4:p.Ala349Thr
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2664G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1375G>A
  hgvsp: ENSP00000420597.1:p.Ala459Thr
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2040
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4490
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ala459Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

7-45141617-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141617
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141617
    reference: chr 7
allele count: 4
allele frequency: 3.616701929510479e-5
allele num: 110598
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.517C>T
  hgvsp: ENST00000483615.1:c.517C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1374C>T
  hgvsp: ENST00000494076.1:c.1374C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.278C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1044C>T
  hgvsp: ENST00000361278.3:c.1044C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1374C>T
  hgvsp: ENST00000258770.3:c.1374C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.397C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1044C>T
  hgvsp: ENST00000395655.4:c.1044C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2663C>T
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6318
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3884
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34904
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2344
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asn458Asn
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

7-45141622-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141622
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141622
    reference: chr 7
allele count: 1
allele frequency: 9.048299824462984e-6
allele num: 110518
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1039A>G
  hgvsp: ENSP00000379016.4:p.Ile347Val
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2658A>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.392A>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.273A>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1369A>G
  hgvsp: ENSP00000420597.1:p.Ile457Val
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1369A>G
  hgvsp: ENSP00000258770.3:p.Ile457Val
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1039A>G
  hgvsp: ENSP00000354992.3:p.Ile347Val
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.512A>G
  hgvsp: ENSP00000417974.1:p.Ile172Val
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2143
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34902
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile457Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP

7-45141650-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141650
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141650
    reference: chr 7
allele count: 2
allele frequency: 1.82395213949586e-5
allele num: 109652
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1011T>C
  hgvsp: ENST00000395655.4:c.1011T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1011T>C
  hgvsp: ENST00000361278.3:c.1011T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.245T>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.364T>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.484T>C
  hgvsp: ENST00000483615.1:c.484T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1341T>C
  hgvsp: ENST00000258770.3:c.1341T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1341T>C
  hgvsp: ENST00000494076.1:c.1341T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2630T>C
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6205
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2552
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1562
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4659
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp447Asp
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

7-45141652-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141652
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141652
    reference: chr 7
allele count: 1
allele frequency: 9.127085539045672e-6
allele num: 109564
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.362G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.243G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1009G>A
  hgvsp: ENSP00000354992.3:p.Asp337Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1339G>A
  hgvsp: ENSP00000258770.3:p.Asp447Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1009G>A
  hgvsp: ENSP00000379016.4:p.Asp337Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1339G>A
  hgvsp: ENSP00000420597.1:p.Asp447Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.482G>A
  hgvsp: ENSP00000417974.1:p.Asp162Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2628G>A
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3261
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1687
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2138
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2247
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp447Asn
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/7-45141653-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141653
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141653
    reference: chr 7
allele count: 1
allele frequency: 9.134422156454382e-6
allele num: 109476
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1008G>T
  hgvsp: ENSP00000354992.3:p.Lys336Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2627G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1008G>T
  hgvsp: ENSP00000379016.4:p.Lys336Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1338G>T
  hgvsp: ENSP00000258770.3:p.Lys446Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.242G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.361G>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.481G>T
  hgvsp: ENSP00000417974.1:p.Lys161Asn
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1338G>T
  hgvsp: ENSP00000420597.1:p.Lys446Asn
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3257
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2177
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3851
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2251
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4498
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Lys446Asn
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD

7-45141656-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141656
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141656
    reference: chr 7
allele count: 3
allele frequency: 2.741428466993201e-5
allele num: 109432
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1335G>C
  hgvsp: ENSP00000258770.3:p.Gln445His
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1335G>C
  hgvsp: ENSP00000420597.1:p.Gln445His
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1005G>C
  hgvsp: ENSP00000379016.4:p.Gln335His
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.358G>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1005G>C
  hgvsp: ENSP00000354992.3:p.Gln335His
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2624G>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.478G>C
  hgvsp: ENSP00000417974.1:p.Gln160His
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.239G>C
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1683
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5139
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2339
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34904
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1561
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4576
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Gln445His
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/7-45141661-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141661
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141661
    reference: chr 7
allele count: 3
allele frequency: 2.743885708013975e-5
allele num: 109334
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1330T>G
  hgvsp: ENSP00000420597.1:p.Ser444Ala
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.353T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.1000T>G
  hgvsp: ENSP00000354992.3:p.Ser334Ala
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.473T>G
  hgvsp: ENSP00000417974.1:p.Ser159Ala
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2619T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.234T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1330T>G
  hgvsp: ENSP00000258770.3:p.Ser444Ala
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.1000T>G
  hgvsp: ENSP00000379016.4:p.Ser334Ala
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6206
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4052
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3830
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6793
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4897
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2338
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2680
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser444Ala
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff

7-45141667-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141667
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141667
    reference: chr 7
allele count: 1
allele frequency: 9.164390842940669e-6
allele num: 109118
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.994G>C
  hgvsp: ENSP00000354992.3:p.Gly332Arg
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1324G>C
  hgvsp: ENSP00000420597.1:p.Gly442Arg
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.994G>C
  hgvsp: ENSP00000379016.4:p.Gly332Arg
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.467G>C
  hgvsp: ENSP00000417974.1:p.Gly157Arg
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.228G>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1324G>C
  hgvsp: ENSP00000258770.3:p.Gly442Arg
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.347G>C
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2613G>C
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6789
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5199
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3242
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4750
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly442Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

7-45141667-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141667
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141667
    reference: chr 7
allele count: 116
allele frequency: 1.063069337781118e-3
allele num: 109118
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.228G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1324G>A
  hgvsp: ENSP00000420597.1:p.Gly442Ser
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.994G>A
  hgvsp: ENSP00000354992.3:p.Gly332Ser
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1324G>A
  hgvsp: ENSP00000258770.3:p.Gly442Ser
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.467G>A
  hgvsp: ENSP00000417974.1:p.Gly157Ser
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.994G>A
  hgvsp: ENSP00000379016.4:p.Gly332Ser
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.347G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2613G>A
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6201
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 7.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 3776
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 9.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 6789
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3242
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6310
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5199
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2828
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34931
  bin: 9.75e1
  variant carriers: 113
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly442Ser
num of homozygotes: 2
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

7-45141668-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141668
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141668
    reference: chr 7
allele count: 253
allele frequency: 2.31897341888176e-3
allele num: 109100
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.227G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.346G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1323G>A
  hgvsp: ENST00000494076.1:c.1323G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.993G>A
  hgvsp: ENST00000395655.4:c.993G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.466G>A
  hgvsp: ENST00000483615.1:c.466G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2612G>A
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1323G>A
  hgvsp: ENST00000258770.3:c.1323G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.993G>A
  hgvsp: ENST00000361278.3:c.993G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6305
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3771
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 8.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 2291
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 9.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 5115
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 5212
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4039
  bin: 6.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 7.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 8.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 7.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 5.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 4693
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4526
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1655
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1323G>A
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

7-45141676-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141676
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141676
    reference: chr 7
allele count: 1
allele frequency: 9.180376028202115e-6
allele num: 108928
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.345-7C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1322-7C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.992-7C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.465-7C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2611-7C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.226-7C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.992-7C>T
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1322-7C>T
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4029
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4576
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1773
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1322-7C>T
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

7-45141678-CAAGGAGA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141678
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141671
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 108838
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.465-16_465-10delTCTCCTT
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.992-16_992-10delTCTCCTT
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2611-16_2611-10delTCTCCTT
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.226-16_226-10delTCTCCTT
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.992-16_992-10delTCTCCTT
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.345-16_345-10delTCTCCTT
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1322-16_1322-10delTCTCCTT
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1322-16_1322-10delTCTCCTT
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3714
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5246
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4029
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4305
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6818
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4524
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1807
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2222
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: CAAGGAGA
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/7-45141683-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 45141683
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 45141683
    reference: chr 7
allele count: 31
allele frequency: 2.850417448232741e-4
allele num: 108756
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000478116
  gene symbol: TBRG4
  hgvsc: ENST00000478116.1:n.345-14T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000482482
  gene symbol: TBRG4
  hgvsc: ENST00000482482.1:n.226-14T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000417974
  ensembl transcript: ENST00000483615
  gene symbol: TBRG4
  hgvsc: ENST00000483615.1:c.465-14T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000354992
  ensembl transcript: ENST00000361278
  gene symbol: TBRG4
  hgvsc: ENST00000361278.3:c.992-14T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000258770
  ensembl transcript: ENST00000258770
  gene symbol: TBRG4
  hgvsc: ENST00000258770.3:c.1322-14T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000420597
  ensembl transcript: ENST00000494076
  gene symbol: TBRG4
  hgvsc: ENST00000494076.1:c.1322-14T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl transcript: ENST00000495973
  gene symbol: TBRG4
  hgvsc: ENST00000495973.1:n.2611-14T>G
  variant of: http://identifiers.org/hgnc/17443
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000136270
  ensembl protein: ENSP00000379016
  ensembl transcript: ENST00000395655
  gene symbol: TBRG4
  hgvsc: ENST00000395655.4:c.992-14T>G
  variant of: http://identifiers.org/hgnc/17443
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5242
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4303
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6214
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6341
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4026
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6817
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 6294
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3160
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4641
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1520
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 402
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1373
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.018329938900204e-4
allele num: 9820
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63696
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15990
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11090
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6250
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.39e-1

FS
type: SiteQuality
SIO_000300: 7.982e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -6.146e-1

MQ
type: SiteQuality
SIO_000300: 5.836e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.286e0

QD
type: SiteQuality
SIO_000300: 1.491e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e-1

DP
type: SiteQuality
SIO_000300: 1.355929e6

MQRankSum
type: SiteQuality
SIO_000300: 1.32e0

GenotypeQuality
all individuals: 430
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4410
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22061
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1669
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 881
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6679
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 695
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10942
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.88465887674331e-4
allele num: 15918
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8052
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.179e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.317185e6

MQRankSum
type: SiteQuality
SIO_000300: -2.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.605e0

VQSLOD
type: SiteQuality
SIO_000300: 6.75e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.59e-1

GenotypeQuality
all individuals: 362
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1780
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2172
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1763
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1362
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5528
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20819
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.264862130027827e-4
allele num: 7906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6170
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.046901172529313e-4
allele num: 9552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.750542018574249e-4
allele num: 61806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15808
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.338874e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

QD
type: SiteQuality
SIO_000300: 1.62e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.1e-2

GenotypeQuality
all individuals: 1362
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2093
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4518
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1763
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2172
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1652
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15808
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.235931786557939e-5
allele num: 61806
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

DP
type: SiteQuality
SIO_000300: 1.338874e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.62e0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-1

GenotypeQuality
all individuals: 1949
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4317
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5218
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1134
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2592
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1155
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4020
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7920
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62246
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.321911746112024e-5
allele num: 15818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6176
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10876
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.51e-1

DP
type: SiteQuality
SIO_000300: 1.351778e6

QD
type: SiteQuality
SIO_000300: 9.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.963e0

MQRankSum
type: SiteQuality
SIO_000300: 2.3e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

GenotypeQuality
all individuals: 2592
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21928
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5218
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5332
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1872
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1949
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1696
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1944
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7920
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62246
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15818
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.619170984455959e-4
allele num: 6176
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.3e0

VQSLOD
type: SiteQuality
SIO_000300: -1.963e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.51e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

QD
type: SiteQuality
SIO_000300: 9.08e0

DP
type: SiteQuality
SIO_000300: 1.351778e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

GenotypeQuality
all individuals: 238
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2359
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3314
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2692
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1612
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.011736139214893e-4
allele num: 9884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53275497378989e-5
allele num: 65242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.149e1

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

FS
type: SiteQuality
SIO_000300: 2.994e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: 3.99e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.981e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.85e-1

DP
type: SiteQuality
SIO_000300: 2.843995e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.26e-1

GenotypeQuality
all individuals: 359
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1661
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2354
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2691
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35657
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 134
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.666360012266176e-5
allele num: 65220
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 5.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-1

QD
type: SiteQuality
SIO_000300: 1.28e1

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

DP
type: SiteQuality
SIO_000300: 2.84353e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-3

GenotypeQuality
all individuals: 1095
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2422
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3311
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8081
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2346
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2692
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65240
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.035208417644678e-4
allele num: 9884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.082000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.367e0

DP
type: SiteQuality
SIO_000300: 2.84338e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

QD
type: SiteQuality
SIO_000300: 1.227e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 35650
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8234
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1191
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2690
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1661
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2340
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9890
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.072382803011902e-5
allele num: 16468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.202e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

FS
type: SiteQuality
SIO_000300: 7.431e0

VQSLOD
type: SiteQuality
SIO_000300: -7.638e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.511e0

MQ
type: SiteQuality
SIO_000300: 5.892e1

DP
type: SiteQuality
SIO_000300: 2.843562e6

GenotypeQuality
all individuals: 104
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1211
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2328
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2690
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3299
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1657
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 470
allele frequency: 7.210358370152185e-3
allele num: 65184
num of homozygotes: 2

African
type: Population
allele count: 8
allele frequency: 8.090614886731392e-4
allele num: 9888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 26
allele frequency: 3.945371775417299e-3
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 19
allele frequency: 1.654475792406827e-3
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.348214285714286e-3
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 92
allele frequency: 5.58659217877095e-3
allele num: 16468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.965e1

VQSLOD
type: SiteQuality
SIO_000300: 3.73e0

FS
type: SiteQuality
SIO_000300: 5.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.38e-1

QD
type: SiteQuality
SIO_000300: 1.132e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.221e0

DP
type: SiteQuality
SIO_000300: 2.857731e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e-1

GenotypeQuality
all individuals: 82
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1211
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2417
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2690
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2328
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1657
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 35685
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.068237604320078e-5
allele num: 65184
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.38e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 5.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.73e0

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.221e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

QD
type: SiteQuality
SIO_000300: 1.132e1

DP
type: SiteQuality
SIO_000300: 2.857731e6

GenotypeQuality
all individuals: 2358
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3321
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2434
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35463
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 92
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535202186127913e-5
allele num: 65138
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9864
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.227391531625719e-4
allele num: 11478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

QD
type: SiteQuality
SIO_000300: 1.127e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.07e0

FS
type: SiteQuality
SIO_000300: 1.111e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

MQRankSum
type: SiteQuality
SIO_000300: -4.97e-1

DP
type: SiteQuality
SIO_000300: 2.81464e6

MQ
type: SiteQuality
SIO_000300: 5.962e1

GenotypeQuality
all individuals: 99
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2361
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8274
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2710
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35463
bin: 9.75e1
variant carriers: 36

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9876
num of homozygotes: 0

South Asian
type: Population
allele count: 36
allele frequency: 2.186323332928459e-3
allele num: 16466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.21e-1

DP
type: SiteQuality
SIO_000300: 2.814468e6

VQSLOD
type: SiteQuality
SIO_000300: 1.89e0

QD
type: SiteQuality
SIO_000300: 1.007e1

MQ
type: SiteQuality
SIO_000300: 5.962e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.261e0

FS
type: SiteQuality
SIO_000300: 5.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.33e-1

GenotypeQuality
all individuals: 338
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1233
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8248
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2363
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1621
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1666
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65152
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.744958481613286e-4
allele num: 8430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.33e0

MQRankSum
type: SiteQuality
SIO_000300: 1.69e0

QD
type: SiteQuality
SIO_000300: 1.177e1

FS
type: SiteQuality
SIO_000300: 5.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.17e-1

DP
type: SiteQuality
SIO_000300: 2.812876e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

GenotypeQuality
all individuals: 1621
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3322
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35434
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2435
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8189
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2713
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2360
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65124
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9862
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.709284096847239e-5
allele num: 11482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

FS
type: SiteQuality
SIO_000300: 2.893e0

DP
type: SiteQuality
SIO_000300: 2.81248e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.998e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.608e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.307e1

VQSLOD
type: SiteQuality
SIO_000300: 2.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.67e0

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-1

GenotypeQuality
all individuals: 1275
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35434
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2361
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.013376570733685e-4
allele num: 9868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65154
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.214771622934888e-4
allele num: 16464
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.37e-1

FS
type: SiteQuality
SIO_000300: 4.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.498e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.43e-1

QD
type: SiteQuality
SIO_000300: 9.94e0

DP
type: SiteQuality
SIO_000300: 2.813067e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 81
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2356
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2434
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

African
type: Population
allele count: 87
allele frequency: 8.812803889789302e-3
allele num: 9872
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535107918086642e-5
allele num: 65142
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.741856819369448e-4
allele num: 11482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.33e0

QD
type: SiteQuality
SIO_000300: 1.262e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-1

DP
type: SiteQuality
SIO_000300: 2.814684e6

FS
type: SiteQuality
SIO_000300: 1.107e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2715
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 76
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35409
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1295
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.013171225937183e-4
allele num: 9870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.870000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

QD
type: SiteQuality
SIO_000300: 1.041e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.393e0

FS
type: SiteQuality
SIO_000300: 1.596e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

DP
type: SiteQuality
SIO_000300: 2.810229e6

GenotypeQuality
all individuals: 310
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3287
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
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GenotypeQuality
all individuals: 101
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 210
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variant carriers: 0

GenotypeQuality
all individuals: 103
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variant carriers: 0

GenotypeQuality
all individuals: 1643
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.073896471166851e-5
allele num: 65064
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9834
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11482
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.809623e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.076e0

VQSLOD
type: SiteQuality
SIO_000300: -4.08e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 9.2699e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.368e0

QD
type: SiteQuality
SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: -1.75e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

GenotypeQuality
all individuals: 205
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 195
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2374
bin: 8.25e1
variant carriers: 5

GenotypeQuality
all individuals: 242
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 337
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variant carriers: 3

GenotypeQuality
all individuals: 1209
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variant carriers: 3

GenotypeQuality
all individuals: 222
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 195
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variant carriers: 2

GenotypeQuality
all individuals: 2268
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variant carriers: 1

GenotypeQuality
all individuals: 34437
bin: 9.75e1
variant carriers: 86

GenotypeQuality
all individuals: 198
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variant carriers: 3

GenotypeQuality
all individuals: 3227
bin: 6.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1575
bin: 8.75e1
variant carriers: 5

East Asian
type: Population
allele count: 1
allele frequency: 1.189343482397717e-4
allele num: 8408
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.747640685075148e-4
allele num: 11444
num of homozygotes: 0

Other
type: Population
allele count: 6
allele frequency: 6.912442396313364e-3
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 58
allele frequency: 9.073274513484763e-4
allele num: 63924
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 46
allele frequency: 7.371794871794872e-3
allele num: 6240
num of homozygotes: 0

African
type: Population
allele count: 13
allele frequency: 1.38033552771289e-3
allele num: 9418
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

DP
type: SiteQuality
SIO_000300: 2.809849e6

QD
type: SiteQuality
SIO_000300: 8.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.283e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.2e2

FS
type: SiteQuality
SIO_000300: 2.16924e2

MQ
type: SiteQuality
SIO_000300: 5.924e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.672e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.94e0

GenotypeQuality
all individuals: 178
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
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GenotypeQuality
all individuals: 249
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2342
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GenotypeQuality
all individuals: 3472
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GenotypeQuality
all individuals: 2440
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GenotypeQuality
all individuals: 35010
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variant carriers: 1

GenotypeQuality
all individuals: 49
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variant carriers: 0

GenotypeQuality
all individuals: 115
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variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9880
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532895947023116e-5
allele num: 65236
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.777347e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

FS
type: SiteQuality
SIO_000300: 1.549e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.674e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

QD
type: SiteQuality
SIO_000300: 1.162e1

VQSLOD
type: SiteQuality
SIO_000300: 7.81e-1

GenotypeQuality
all individuals: 2336
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 178
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 58
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variant carriers: 0

GenotypeQuality
all individuals: 63
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variant carriers: 0

GenotypeQuality
all individuals: 240
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GenotypeQuality
all individuals: 2436
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 2695
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1653
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.06654400490647e-5
allele num: 65220
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9882
num of homozygotes: 0

South Asian
type: Population
allele count: 13
allele frequency: 7.916209962245768e-4
allele num: 16422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.83e-1

QD
type: SiteQuality
SIO_000300: 1.334e1

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.86e-1

DP
type: SiteQuality
SIO_000300: 2.777278e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.2e0

MQRankSum
type: SiteQuality
SIO_000300: 3.69e-1

GenotypeQuality
all individuals: 239
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 240
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8930
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
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variant carriers: 0

GenotypeQuality
all individuals: 1404
bin: 2.25e1
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GenotypeQuality
all individuals: 1606
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variant carriers: 0

GenotypeQuality
all individuals: 55
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GenotypeQuality
all individuals: 128
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GenotypeQuality
all individuals: 1653
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variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2695
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variant carriers: 0

GenotypeQuality
all individuals: 2436
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.599816007359705e-5
allele num: 65220
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.777278e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.83e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

VQSLOD
type: SiteQuality
SIO_000300: 3.2e0

QD
type: SiteQuality
SIO_000300: 1.334e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.69e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

GenotypeQuality
all individuals: 99
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
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variant carriers: 0

GenotypeQuality
all individuals: 1524
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3411
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
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GenotypeQuality
all individuals: 8715
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variant carriers: 0

GenotypeQuality
all individuals: 156
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variant carriers: 0

GenotypeQuality
all individuals: 2324
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variant carriers: 0

GenotypeQuality
all individuals: 34993
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 161
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variant carriers: 0

GenotypeQuality
all individuals: 2428
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.602215199582732e-5
allele num: 65186
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.664e0

MQ
type: SiteQuality
SIO_000300: 5.93e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-1

QD
type: SiteQuality
SIO_000300: 1.25e1

DP
type: SiteQuality
SIO_000300: 2.773276e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.61e-1

FS
type: SiteQuality
SIO_000300: 2.912e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-3

GenotypeQuality
all individuals: 34987
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 2694
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1548
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1603
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2424
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2325
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65204
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9892
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.29900803023146e-3
allele num: 8468
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.491e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

QD
type: SiteQuality
SIO_000300: 1.284e1

DP
type: SiteQuality
SIO_000300: 2.77279e6

FS
type: SiteQuality
SIO_000300: 5.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

GenotypeQuality
all individuals: 2315
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8662
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2422
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1601
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1575
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2694
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3362
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34977
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 290
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53477807109092e-5
allele num: 65156
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.949e0

MQRankSum
type: SiteQuality
SIO_000300: 4.51e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

QD
type: SiteQuality
SIO_000300: 1.486e1

DP
type: SiteQuality
SIO_000300: 2.769877e6

GenotypeQuality
all individuals: 259
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1629
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1601
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2422
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2315
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3362
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34977
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65156
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9884
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.108735491753207e-5
allele num: 16370
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.17e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

FS
type: SiteQuality
SIO_000300: 5.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.949e0

DP
type: SiteQuality
SIO_000300: 2.769877e6

MQRankSum
type: SiteQuality
SIO_000300: 4.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

QD
type: SiteQuality
SIO_000300: 1.486e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.44e-1

GenotypeQuality
all individuals: 162
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3220
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1637
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2692
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34972
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.128201985537444e-5
allele num: 16318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65094
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9862
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.52e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

DP
type: SiteQuality
SIO_000300: 2.763288e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

FS
type: SiteQuality
SIO_000300: 5.85e-1

QD
type: SiteQuality
SIO_000300: 1.274e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.13e-1

GenotypeQuality
all individuals: 332
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1603
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34972
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 95
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2408
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1593
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2692
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3220
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 4
allele frequency: 3.480076561684357e-4
allele num: 11494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65094
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.17813383600377e-4
allele num: 8488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

FS
type: SiteQuality
SIO_000300: 5.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-2

DP
type: SiteQuality
SIO_000300: 2.763288e6

QD
type: SiteQuality
SIO_000300: 1.274e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.52e-1

GenotypeQuality
all individuals: 2692
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8526
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1593
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1657
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2288
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.025111381125962e-4
allele num: 9876
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65114
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.775e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.56e-1

QD
type: SiteQuality
SIO_000300: 1.297e1

DP
type: SiteQuality
SIO_000300: 2.762802e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.79e-1

GenotypeQuality
all individuals: 34962
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3167
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2690
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8331
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1657
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1592
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1594
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2393
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.027986209693774e-4
allele num: 9862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16290
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.760867e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.42e-1

QD
type: SiteQuality
SIO_000300: 1.573e1

FS
type: SiteQuality
SIO_000300: 3.974e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeQuality
all individuals: 86
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3164
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8467
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1599
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2273
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2397
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2689
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.073518564052127e-5
allele num: 65072
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.22684333210649e-4
allele num: 16302
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.903e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

DP
type: SiteQuality
SIO_000300: 2.7603e6

MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.5e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

FS
type: SiteQuality
SIO_000300: 5.564e0

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 1.24e1

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1805
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8716
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2387
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1583
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1584
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34946
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65104
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16264
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.692628650904033e-5
allele num: 11504
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9886
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.233e1

DP
type: SiteQuality
SIO_000300: 2.759218e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.505e0

MQRankSum
type: SiteQuality
SIO_000300: 9.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.96e-1

FS
type: SiteQuality
SIO_000300: 9.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3123
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.160670280926565e-5
allele num: 16232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65074
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9878
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.588e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.349e0

VQSLOD
type: SiteQuality
SIO_000300: -5.065e-1

DP
type: SiteQuality
SIO_000300: 2.758035e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.15e0

FS
type: SiteQuality
SIO_000300: 1.783e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.287e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.175364362952515e-4
allele num: 8508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9840
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64968
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.08e0

QD
type: SiteQuality
SIO_000300: 1.185e1

DP
type: SiteQuality
SIO_000300: 2.754072e6

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

FS
type: SiteQuality
SIO_000300: 2.914e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16176
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.737015806843842e-4
allele num: 11514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64940
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.871e0

DP
type: SiteQuality
SIO_000300: 2.752189e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.47e-1

QD
type: SiteQuality
SIO_000300: 1.379e1

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

MQRankSum
type: SiteQuality
SIO_000300: -8.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 107
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2906
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.682062858135092e-5
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9770
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.417e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.64e0

MQRankSum
type: SiteQuality
SIO_000300: -9.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.139999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

FS
type: SiteQuality
SIO_000300: 3.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.26e-1

DP
type: SiteQuality
SIO_000300: 2.739481e6

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2806
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9754
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.098757398283288e-5
allele num: 64542
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.395e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.69e-1

DP
type: SiteQuality
SIO_000300: 2.731808e6

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.04e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15780
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.025641025641026e-4
allele num: 9750
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQ
type: SiteQuality
SIO_000300: 5.788e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.730488e6

QD
type: SiteQuality
SIO_000300: 1.089e1

VQSLOD
type: SiteQuality
SIO_000300: -2.992e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15746
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.656360588563978e-5
allele num: 64428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9744
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.3429e1

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.191e1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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South Asian
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allele count: 0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.561426519268003e-5
allele num: 64044
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 860
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.715213e6

MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 1.55e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64056
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.034126163391934e-4
allele num: 9670
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.43e-1

DP
type: SiteQuality
SIO_000300: 2.715015e6

VQSLOD
type: SiteQuality
SIO_000300: -1.551e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.234e0

QD
type: SiteQuality
SIO_000300: 1.295e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.345e0

GenotypeQuality
all individuals: 316
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
all individuals: 1563
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.12236550410591e-5
allele num: 64054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9684
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.925e0

QD
type: SiteQuality
SIO_000300: 1.141e1

FS
type: SiteQuality
SIO_000300: 6.498e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

VQSLOD
type: SiteQuality
SIO_000300: 4.53e-1

DP
type: SiteQuality
SIO_000300: 2.714205e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.689607229753215e-5
allele num: 11508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14956
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63772
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.271e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.095e0

DP
type: SiteQuality
SIO_000300: 2.700758e6

MQ
type: SiteQuality
SIO_000300: 5.953e1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e-1

FS
type: SiteQuality
SIO_000300: 4.467e0

QD
type: SiteQuality
SIO_000300: 1.417e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.571783345383672e-5
allele num: 63622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.368e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.14e-1

DP
type: SiteQuality
SIO_000300: 2.695839e6

MQRankSum
type: SiteQuality
SIO_000300: -1.193e0

QD
type: SiteQuality
SIO_000300: 1.326e1

VQSLOD
type: SiteQuality
SIO_000300: 2.59e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.149507102138515e-5
allele num: 63502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14522
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

DP
type: SiteQuality
SIO_000300: 2.689087e6

QD
type: SiteQuality
SIO_000300: 1.695e1

MQRankSum
type: SiteQuality
SIO_000300: -2.77e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.026e0

FS
type: SiteQuality
SIO_000300: 2.831e0

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 170
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.578282828282828e-5
allele num: 63360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.937699458859442e-5
allele num: 14414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9590
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.124e0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.1e0

DP
type: SiteQuality
SIO_000300: 2.685455e6

MQ
type: SiteQuality
SIO_000300: 5.984e1

VQSLOD
type: SiteQuality
SIO_000300: 7.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.425e0

QD
type: SiteQuality
SIO_000300: 1.327e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14374
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.96e-1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.840000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

QD
type: SiteQuality
SIO_000300: 1.298e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.3e-1

DP
type: SiteQuality
SIO_000300: 2.685458e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.391401140948936e-4
allele num: 14374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.840000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9568
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.069136151562279e-5
allele num: 14146
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63238
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

VQSLOD
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.969e0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.182e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.24e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.162297665090961e-5
allele num: 13962
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.221932114882506e-4
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.165658931906676e-5
allele num: 63178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 2.678959e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.4e-2

QD
type: SiteQuality
SIO_000300: 1.463e1

FS
type: SiteQuality
SIO_000300: 5.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 4294
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2150
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5512
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.583882412569691e-5
allele num: 63136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.181844297615628e-5
allele num: 13924
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.045150501672241e-4
allele num: 9568
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 1.633e0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e-1

QD
type: SiteQuality
SIO_000300: 1.186e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.04e-1

DP
type: SiteQuality
SIO_000300: 2.677033e6

MQ
type: SiteQuality
SIO_000300: 5.979e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

GenotypeQuality
all individuals: 121
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 2137
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.052139350011691e-3
allele num: 8554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13104
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9442
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.07e-1

DP
type: SiteQuality
SIO_000300: 2.662537e6

QD
type: SiteQuality
SIO_000300: 3.097e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.05e-1

FS
type: SiteQuality
SIO_000300: 1.146e0

VQSLOD
type: SiteQuality
SIO_000300: -2.295e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.5e-1

MQ
type: SiteQuality
SIO_000300: 5.935e1

GenotypeQuality
all individuals: 1561
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
all individuals: 2277
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.866582756450598e-5
allele num: 12712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.213057867172188e-5
allele num: 62246
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.16e-1

QD
type: SiteQuality
SIO_000300: 9.859999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 7.43e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.69e-1

DP
type: SiteQuality
SIO_000300: 2.65807e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.24e-1

FS
type: SiteQuality
SIO_000300: 8.321e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.345e0

GenotypeQuality
all individuals: 5099
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1561
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34907
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 4516
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variant carriers: 0

GenotypeQuality
all individuals: 1104
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GenotypeQuality
all individuals: 1400
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GenotypeQuality
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GenotypeQuality
all individuals: 2131
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GenotypeQuality
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GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 605
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GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12732
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.606064499550302e-5
allele num: 62264
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.915e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-2

DP
type: SiteQuality
SIO_000300: 2.65801e6

VQSLOD
type: SiteQuality
SIO_000300: -2.192e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
SIO_000300: 1.639e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.52e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

MQRankSum
type: SiteQuality
SIO_000300: 2.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.2e-2

GenotypeQuality
all individuals: 1140
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1562
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variant carriers: 0

GenotypeQuality
all individuals: 96
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GenotypeQuality
all individuals: 584
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variant carriers: 0

GenotypeQuality
all individuals: 4511
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
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variant carriers: 0

GenotypeQuality
all individuals: 2135
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variant carriers: 0

GenotypeQuality
all individuals: 297
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variant carriers: 0

GenotypeQuality
all individuals: 70
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GenotypeQuality
all individuals: 2272
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variant carriers: 0

GenotypeQuality
all individuals: 2346
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variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2680
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62184
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 7.946598855689765e-4
allele num: 12584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.656645e6

FS
type: SiteQuality
SIO_000300: 3.373e0

VQSLOD
type: SiteQuality
SIO_000300: 5.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

QD
type: SiteQuality
SIO_000300: 1.575e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.84e-1

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
all individuals: 65
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GenotypeQuality
all individuals: 1405
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GenotypeQuality
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GenotypeQuality
all individuals: 313
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4981
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 34907
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2344
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2258
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.619629758994062e-4
allele num: 11452
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.280887711162637e-5
allele num: 12076
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

MQ
type: SiteQuality
SIO_000300: 5.98e1

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

FS
type: SiteQuality
SIO_000300: 3.047e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-1

DP
type: SiteQuality
SIO_000300: 2.651338e6

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

QD
type: SiteQuality
SIO_000300: 1.253e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.1e-2

GenotypeQuality
all individuals: 5007
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
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GenotypeQuality
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bin: 9.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2147
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GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
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GenotypeQuality
all individuals: 1408
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 504
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variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.344116268166901e-4
allele num: 8532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.234780358413664e-5
allele num: 61828
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

FS
type: SiteQuality
SIO_000300: 1.128e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.12e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.34e0

DP
type: SiteQuality
SIO_000300: 2.650968e6

QD
type: SiteQuality
SIO_000300: 1.075e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.67e-1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2255
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GenotypeQuality
all individuals: 1406
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61804
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9252
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.289124668435013e-5
allele num: 12064
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.92e1

VQSLOD
type: SiteQuality
SIO_000300: 2.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.36e-1

QD
type: SiteQuality
SIO_000300: 1.37e1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.649851e6

GenotypeQuality
all individuals: 414
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2137
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variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 243
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GenotypeQuality
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GenotypeQuality
all individuals: 2680
bin: 9.25e1
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GenotypeQuality
all individuals: 505
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GenotypeQuality
all individuals: 55
bin: 4.75e1
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GenotypeQuality
all individuals: 70
bin: 5.25e1
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GenotypeQuality
all individuals: 1671
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1397
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11832
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9126
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.25955865575801e-5
allele num: 61358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

QD
type: SiteQuality
SIO_000300: 1.126e1

VQSLOD
type: SiteQuality
SIO_000300: 9.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.6e-2

FS
type: SiteQuality
SIO_000300: 3.89e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.89e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 2.643333e6

MQ
type: SiteQuality
SIO_000300: 5.979e1

GenotypeQuality
all individuals: 304
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34903
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1397
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.096972356296621e-4
allele num: 9116
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11806
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61314
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.32e-1

QD
type: SiteQuality
SIO_000300: 7.29e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.43e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.053e0

MQRankSum
type: SiteQuality
SIO_000300: 6.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

DP
type: SiteQuality
SIO_000300: 2.642503e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1664
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1396
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1562
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9102
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.490405841399219e-5
allele num: 11778
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.654e1

MQRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.82e0

FS
type: SiteQuality
SIO_000300: 4.994e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.21e0

DP
type: SiteQuality
SIO_000300: 2.64179e6

QD
type: SiteQuality
SIO_000300: 1.015e1

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2136
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11758
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9102
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.897639337839162e-5
allele num: 61254
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.96e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.398e0

QD
type: SiteQuality
SIO_000300: 1.442e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.0e-1

FS
type: SiteQuality
SIO_000300: 1.144e0

DP
type: SiteQuality
SIO_000300: 2.641587e6

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.477e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e0

GenotypeQuality
all individuals: 140
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2131
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34902
bin: 9.75e1
variant carriers: 3

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11748
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9098
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.903723560757135e-5
allele num: 61178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.949e1

FS
type: SiteQuality
SIO_000300: 9.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.04e-1

QD
type: SiteQuality
SIO_000300: 1.148e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.600000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

DP
type: SiteQuality
SIO_000300: 2.639965e6

VQSLOD
type: SiteQuality
SIO_000300: 5.05e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

GenotypeQuality
all individuals: 1385
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2132
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2679
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.568980291345329e-5
allele num: 11670
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61086
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9064
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 2.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.554e0

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

DP
type: SiteQuality
SIO_000300: 2.640762e6

QD
type: SiteQuality
SIO_000300: 1.036e1

GenotypeQuality
all individuals: 4546
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 276
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 41
bin: 4.25e1
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GenotypeQuality
all individuals: 2240
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1385
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.630655910206945e-4
allele num: 11404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.637036309465344e-5
allele num: 61086
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11670
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

African
type: Population
allele count: 112
allele frequency: 1.235657546337158e-2
allele num: 9064
num of homozygotes: 2

FS
type: SiteQuality
SIO_000300: 2.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.3e-2

QD
type: SiteQuality
SIO_000300: 1.036e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.554e0

MQRankSum
type: SiteQuality
SIO_000300: 4.14e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 2.640762e6

GenotypeQuality
all individuals: 295
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 549
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 392
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1381
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
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GenotypeQuality
all individuals: 34945
bin: 9.75e1
variant carriers: 252

GenotypeQuality
all individuals: 2331
bin: 8.25e1
variant carriers: 1

African
type: Population
allele count: 6
allele frequency: 6.623978803267829e-4
allele num: 9058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.05143721633888e-4
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 197
allele frequency: 3.225595179618168e-3
allele num: 61074
num of homozygotes: 0

Latino
type: Population
allele count: 22
allele frequency: 1.930163186523952e-3
allele num: 11398
num of homozygotes: 0

South Asian
type: Population
allele count: 21
allele frequency: 1.798869282165496e-3
allele num: 11674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.768844221105527e-3
allele num: 796
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e-1

QD
type: SiteQuality
SIO_000300: 9.890000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

FS
type: SiteQuality
SIO_000300: 2.868e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.76e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

MQRankSum
type: SiteQuality
SIO_000300: 2.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.231e0

DP
type: SiteQuality
SIO_000300: 2.64115e6

GenotypeQuality
all individuals: 2705
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2348
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GenotypeQuality
all individuals: 36
bin: 5.25e1
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GenotypeQuality
all individuals: 256
bin: 1.75e1
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GenotypeQuality
all individuals: 1389
bin: 7.25e1
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GenotypeQuality
all individuals: 34809
bin: 9.75e1
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GenotypeQuality
all individuals: 40
bin: 4.75e1
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GenotypeQuality
all individuals: 4595
bin: 6.25e1
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GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 2148
bin: 7.75e1
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GenotypeQuality
all individuals: 1566
bin: 8.75e1
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GenotypeQuality
all individuals: 423
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.105705440070765e-4
allele num: 9044
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61008
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11594
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.18e0

FS
type: SiteQuality
SIO_000300: 1.838e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.22e-1

DP
type: SiteQuality
SIO_000300: 2.627508e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

QD
type: SiteQuality
SIO_000300: 1.448e1

GenotypeQuality
all individuals: 1386
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2148
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34808
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2705
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2348
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4522
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1566
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9030
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.626508e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

MQ
type: SiteQuality
SIO_000300: 3.761e1

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

QD
type: SiteQuality
SIO_000300: 8.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.95e0