11-408859-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408859
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408859
    reference: chr 11
allele count: 31
allele frequency: 2.594055429106976e-4
allele num: 119504
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.42G>A
  hgvsp: ENST00000530494.1:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.184G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.42G>A
  hgvsp: ENST00000531205.1:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.42G>A
  hgvsp: ENST00000332725.3:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.42G>A
  hgvsp: ENST00000382520.2:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-653G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-653G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.42G>A
  hgvsp: ENST00000431843.2:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.182G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.212G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.42G>A
  hgvsp: ENST00000397632.3:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.75G>A
  hgvsp: ENST00000528058.1:c.75G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-653G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-653G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.385G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-653G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.535+35G>A
  variant of: http://identifiers.org/hgnc/30575
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4398
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro14Pro
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/11-408864-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408864
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408864
    reference: chr 11
allele count: 1
allele frequency: 8.373386029842748e-6
allele num: 119426
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.177T>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-658T>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.37T>G
  hgvsp: ENSP00000434030.1:p.Ser13Ala
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.37T>G
  hgvsp: ENSP00000380756.3:p.Ser13Ala
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.37T>G
  hgvsp: ENSP00000371960.2:p.Ser13Ala
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.37T>G
  hgvsp: ENSP00000333656.3:p.Ser13Ala
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.37T>G
  hgvsp: ENSP00000433022.1:p.Ser13Ala
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.535+30T>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.380T>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.37T>G
  hgvsp: ENSP00000403104.2:p.Ser13Ala
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.70T>G
  hgvsp: ENSP00000431698.1:p.Ser24Ala
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-658T>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-658T>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.207T>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-658T>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.179T>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-658T>G
  variant of: http://identifiers.org/hgnc/30575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20150
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser13Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD

11-408871-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408871
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408871
    reference: chr 11
allele count: 4
allele frequency: 3.351936581359881e-5
allele num: 119334
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.30C>G
  hgvsp: ENSP00000403104.2:p.Asp10Glu
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-665C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.30C>G
  hgvsp: ENSP00000333656.3:p.Asp10Glu
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-665C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.30C>G
  hgvsp: ENSP00000380756.3:p.Asp10Glu
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.200C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-665C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.30C>G
  hgvsp: ENSP00000433022.1:p.Asp10Glu
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.373C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-665C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.63C>G
  hgvsp: ENSP00000431698.1:p.Asp21Glu
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.30C>G
  hgvsp: ENSP00000371960.2:p.Asp10Glu
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.172C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.30C>G
  hgvsp: ENSP00000434030.1:p.Asp10Glu
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.535+23C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.170C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-665C>G
  variant of: http://identifiers.org/hgnc/30575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14695
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4400
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp10Glu
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum

11-408876-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408876
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408876
    reference: chr 11
allele count: 25
allele frequency: 2.097104318357212e-4
allele num: 119212
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.58C>T
  hgvsp: ENSP00000431698.1:p.Pro20Ser
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.195C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.25C>T
  hgvsp: ENSP00000434030.1:p.Pro9Ser
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.25C>T
  hgvsp: ENSP00000403104.2:p.Pro9Ser
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.165C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.535+18C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-670C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.25C>T
  hgvsp: ENSP00000333656.3:p.Pro9Ser
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.368C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.25C>T
  hgvsp: ENSP00000371960.2:p.Pro9Ser
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.25C>T
  hgvsp: ENSP00000380756.3:p.Pro9Ser
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.25C>T
  hgvsp: ENSP00000433022.1:p.Pro9Ser
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-670C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-670C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.167C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-670C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-670C>T
  variant of: http://identifiers.org/hgnc/30575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro9Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ

11-408882-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408882
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408882
    reference: chr 11
allele count: 3
allele frequency: 2.519653295706511e-5
allele num: 119064
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.19A>G
  hgvsp: ENSP00000380756.3:p.Arg7Gly
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-676A>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.52A>G
  hgvsp: ENSP00000431698.1:p.Arg18Gly
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.362A>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-676A>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.535+12A>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.19A>G
  hgvsp: ENSP00000371960.2:p.Arg7Gly
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-676A>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.161A>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.19A>G
  hgvsp: ENSP00000403104.2:p.Arg7Gly
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.19A>G
  hgvsp: ENSP00000333656.3:p.Arg7Gly
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.19A>G
  hgvsp: ENSP00000433022.1:p.Arg7Gly
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.189A>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.159A>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-676A>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-676A>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.19A>G
  hgvsp: ENSP00000434030.1:p.Arg7Gly
  variant of: http://identifiers.org/hgnc/30575
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19856
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg7Gly
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

11-408905-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408905
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408905
    reference: chr 11
allele count: 2
allele frequency: 1.688704257223433e-5
allele num: 118434
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-12C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.524C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-12C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-699C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.41-12C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-12C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-12C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-12C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-699C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-699C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-12C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-699C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-699C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-12C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-12C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-12C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-12C>T
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4373
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7495
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6404
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

11-408906-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408906
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408906
    reference: chr 11
allele count: 2
allele frequency: 1.688960951222808e-5
allele num: 118416
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-13C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-700C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.41-13C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-13C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-700C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-700C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-13C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-13C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-13C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-13C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-13C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-13C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-13C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-700C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.523C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-700C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-13C>T
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14342
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19019
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum

11-408910-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408910
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408910
    reference: chr 11
allele count: 7
allele frequency: 5.918960968680241e-5
allele num: 118264
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-17G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-17G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-17G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-17G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-704G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.519G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-704G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-704G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-17G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-17G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.41-17G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-17G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-704G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-704G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-17G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-17G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-17G>A
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7463
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4365
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14146
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ

11-408913-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408913
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408913
    reference: chr 11
allele count: 4
allele frequency: 3.384495625539404e-5
allele num: 118186
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-20A>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-20A>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.41-20A>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-707A>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-707A>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-20A>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-20A>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-707A>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-20A>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.516A>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-20A>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-20A>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-20A>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-20A>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-707A>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-20A>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-707A>T
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7431
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

11-408913-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408913
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408912
    reference: chr 11
allele count: 1
allele frequency: 8.46123906384851e-6
allele num: 118186
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-21delC
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-708delC
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-708delC
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-21delC
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-708delC
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-708delC
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-21delC
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-21delC
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-21delC
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-21delC
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-21delC
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-708delC
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.41-21delC
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.515delC
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-21delC
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-21delC
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-21delC
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4359
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: TG
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ

11-408916-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408916
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408916
    reference: chr 11
allele count: 1
allele frequency: 8.467830711128423e-6
allele num: 118094
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-23C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-710C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-710C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-710C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-23C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-23C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-23C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-710C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.513C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-23C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-23C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-23C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-23C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-23C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.41-23C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-710C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-23C>T
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2532
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4344
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ

11-408920-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408920
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408920
    reference: chr 11
allele count: 1
allele frequency: 8.477162524159914e-6
allele num: 117964
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-714C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-714C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-27C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.41-27C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-27C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-27C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-714C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-27C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-27C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-714C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-27C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.509C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-714C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-27C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-27C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-27C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-27C>A
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13383
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4324
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum

11-408925-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408925
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408925
    reference: chr 11
allele count: 1
allele frequency: 8.493001766544367e-6
allele num: 117744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-32C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.504C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-32C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-32C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.41-32C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-719C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-32C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-32C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-719C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-32C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-719C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-719C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-32C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-32C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-32C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-32C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-719C>T
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

11-408925-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408925
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408924
    reference: chr 11
allele count: 1
allele frequency: 8.493001766544367e-6
allele num: 117744
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.503delG
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-33delG
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-720delG
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-720delG
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-33delG
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-33delG
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-33delG
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-720delG
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.41-33delG
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-33delG
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-33delG
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-720delG
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-33delG
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-33delG
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-720delG
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-33delG
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-33delG
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6364
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4291
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: GC
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

11-408926-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408926
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408926
    reference: chr 11
allele count: 1
allele frequency: 8.49285750683675e-6
allele num: 117746
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-720G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-33G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-33G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.503G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-33G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.41-33G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-33G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-33G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-720G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-33G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-33G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-720G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-33G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-33G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-33G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-720G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-720G>A
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

11-408933-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408933
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408933
    reference: chr 11
allele count: 1
allele frequency: 8.518468038707919e-6
allele num: 117392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.496C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-40C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-40C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-40C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-40C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-727C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-40C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-727C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-727C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.41-40C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-40C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-40C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-40C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-40C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-727C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-40C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-727C>T
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6947
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6827
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

11-408933-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408933
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408933
    reference: chr 11
allele count: 2
allele frequency: 1.703693607741584e-5
allele num: 117392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.41-40C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-727C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-40C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-40C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-727C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-40C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-40C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.496C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-40C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-727C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-40C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-40C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-40C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-727C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-727C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-40C>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-40C>A
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11359
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/11-408939-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 408939
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 408939
    reference: chr 11
allele count: 23
allele frequency: 1.965879175356422e-4
allele num: 116996
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-46G>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.323-733G>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-46G>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-46G>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.41-46G>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-733G>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-46G>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-46G>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.490G>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-46G>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-46G>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-733G>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.323-733G>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-71-733G>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-46G>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-46G>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-46G>T
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10400
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6727
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12738
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4227
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9102
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum

11-409201-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 409201
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 409201
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 214
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-308G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-308G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-995G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-308G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-995G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-308G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.322+667G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.40+16G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.328-100G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.322+667G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-308G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-308G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-308G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-308G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-72+667G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-308G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-308G>C
  variant of: http://identifiers.org/hgnc/30575
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

11-409224-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 409224
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 409224
    reference: chr 11
allele count: 1
allele frequency: 1.623376623376623e-3
allele num: 616
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-331G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-72+644G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.328-123G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.33G>A
  hgvsp: ENSP00000431698.1:p.Trp11Ter
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.322+644G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-331G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-331G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-331G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-331G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-331G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-331G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-331G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-331G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-331G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-1018G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.322+644G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-1018G>A
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Trp11Ter
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

11-409258-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 409258
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 409258
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 888
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-365C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.-2C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-365C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-365C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-365C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.328-157C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-72+610C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-365C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-1052C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.322+610C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.322+610C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-365C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-365C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-365C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-365C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-365C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-1052C>G
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2989
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

11-409267-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 409267
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 409267
    reference: chr 11
allele count: 2
allele frequency: 2.450980392156863e-3
allele num: 816
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.-11C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.322+601C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.148-374C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.328-166C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.8-374C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.8-374C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.8-374C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-72+601C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.351-374C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-1061C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.8-374C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.8-374C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-374C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.322+601C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.150-374C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-1061C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.8-374C>T
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5805
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

11-409817-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 409817
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 409817
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 14738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.322+51C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-72+51C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.327+51C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.149+51C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-1611C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.-53+51C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-924C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.350+43C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.7+51C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525070
  gene symbol: SIGIRR
  hgvsc: ENST00000525070.1:n.378C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.147+51C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.7+51C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.7+51C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.7+51C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.322+51C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-1611C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.7+51C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.7+51C>T
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30063
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

11-409818-CAGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 409818
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 409815
    reference: chr 11
allele count: 1
allele frequency: 6.803646754660499e-5
allele num: 14698
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-1615_102-1613delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.7+47_7+49delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.-53+47_-53+49delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525070
  gene symbol: SIGIRR
  hgvsc: ENST00000525070.1:n.374_376delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.322+47_322+49delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.7+47_7+49delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.7+47_7+49delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.350+39_350+41delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.322+47_322+49delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-72+47_-72+49delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.147+47_147+49delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-928_178-926delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.327+47_327+49delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-1615_110-1613delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.149+47_149+49delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.7+47_7+49delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.7+47_7+49delCCT
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.7+47_7+49delCCT
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30087
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: CAGG
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ

11-409837-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 409837
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 409837
    reference: chr 11
allele count: 6
allele frequency: 4.08997955010225e-4
allele num: 14670
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.149+31T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.322+31T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-944T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.-53+31T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.7+31T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.147+31T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.327+31T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-72+31T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.7+31T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-1631T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.350+23T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-1631T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.7+31T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.7+31T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525070
  gene symbol: SIGIRR
  hgvsc: ENST00000525070.1:n.358T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.322+31T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.7+31T>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.7+31T>C
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23049
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1246
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP

11-409844-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 409844
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 409844
    reference: chr 11
allele count: 1
allele frequency: 6.718624025799516e-5
allele num: 14884
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.322+24G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.7+24G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.7+24G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.7+24G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.7+24G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.350+16G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525070
  gene symbol: SIGIRR
  hgvsc: ENST00000525070.1:n.351G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-951G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.-53+24G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.327+24G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-1638G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-72+24G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.149+24G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.7+24G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-1638G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.7+24G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.322+24G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.147+24G>C
  variant of: http://identifiers.org/hgnc/30575
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2416
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

11-409868-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 409868
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 409868
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 16398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.7G>C
  hgvsp: ENSP00000434030.1:p.Gly3Arg
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.7G>C
  hgvsp: ENSP00000333656.3:p.Gly3Arg
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-1662G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.147G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.7G>C
  hgvsp: ENSP00000433022.1:p.Gly3Arg
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.7G>C
  hgvsp: ENSP00000380756.3:p.Gly3Arg
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-72G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.149G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.7G>C
  hgvsp: ENSP00000371960.2:p.Gly3Arg
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.342G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.7G>C
  hgvsp: ENSP00000403104.2:p.Gly3Arg
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525070
  gene symbol: SIGIRR
  hgvsc: ENST00000525070.1:n.327G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.-53G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.322G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.327G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.322G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-975G>C
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-1662G>C
  variant of: http://identifiers.org/hgnc/30575
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly3Arg
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

11-409876-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 409876
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 409876
    reference: chr 11
allele count: 1
allele frequency: 5.927682276229994e-5
allele num: 16870
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.314C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.139C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.319C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.141C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.-2C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.314C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.-2C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.-2C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.334C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-1670C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.-2C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-1670C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-80C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.-2C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.-61C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.-2C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525070
  gene symbol: SIGIRR
  hgvsc: ENST00000525070.1:n.319C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-983C>T
  variant of: http://identifiers.org/hgnc/30575
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19566
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS

11-409885-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 409885
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 409885
    reference: chr 11
allele count: 13
allele frequency: 7.688668086113082e-4
allele num: 16908
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.-11G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.325G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.-11G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525070
  gene symbol: SIGIRR
  hgvsc: ENST00000525070.1:n.310G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.-70G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.305G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-1679G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.310G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.305G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.-11G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.-11G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.-11G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-89G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.132G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-992G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.130G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.-11G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-1679G>A
  variant of: http://identifiers.org/hgnc/30575
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20017
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

11-409886-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 409886
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 409886
    reference: chr 11
allele count: 128
allele frequency: 7.535617567408454e-3
allele num: 16986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.-71C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.304C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-1680C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.-12C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.-12C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.129C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-993C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.-12C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.304C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.309C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.-12C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-90C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525070
  gene symbol: SIGIRR
  hgvsc: ENST00000525070.1:n.309C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.131C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.-12C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.-12C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.324C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-1680C>T
  variant of: http://identifiers.org/hgnc/30575
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20070
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 27508
  bin: 7.5e0
  variant carriers: 55
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

11-409889-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 409889
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 409889
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 16882
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.-15C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.306C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.126C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-93C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-996C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.-15C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.-15C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.321C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.301C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525070
  gene symbol: SIGIRR
  hgvsc: ENST00000525070.1:n.306C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.301C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.-15C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.-74C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.-15C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-1683C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-1683C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.128C>G
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.-15C>G
  variant of: http://identifiers.org/hgnc/30575
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20622
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

11-409896-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 409896
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 409896
    reference: chr 11
allele count: 4
allele frequency: 2.394922763740869e-4
allele num: 16702
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.294G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.-22G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.121G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-1003G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.294G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-100G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525070
  gene symbol: SIGIRR
  hgvsc: ENST00000525070.1:n.299G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.-22G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.-22G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.314G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.-81G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.-22G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.-22G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.-22G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.119G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-1690G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-1690G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.299G>A
  variant of: http://identifiers.org/hgnc/30575
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25843
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 21385
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

11-409897-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 409897
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 409897
    reference: chr 11
allele count: 2
allele frequency: 1.236399604352127e-4
allele num: 16176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.-23C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.-23C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.293C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.-23C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-1004C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.-23C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.-23C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.298C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.-82C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.-23C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.293C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-1691C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.118C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.120C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525070
  gene symbol: SIGIRR
  hgvsc: ENST00000525070.1:n.298C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.313C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-101C>T
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-1691C>T
  variant of: http://identifiers.org/hgnc/30575
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21997
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD

11-409919-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 409919
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 409919
    reference: chr 11
allele count: 2
allele frequency: 1.32890365448505e-4
allele num: 15050
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000431698
  ensembl transcript: ENST00000528058
  gene symbol: SIGIRR
  hgvsc: ENST00000528058.1:c.-104G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000435135
  ensembl transcript: ENST00000528209
  gene symbol: SIGIRR
  hgvsc: ENST00000528209.1:c.-123G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000530683
  gene symbol: SIGIRR
  hgvsc: ENST00000530683.1:n.98G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528698
  gene symbol: SIGIRR
  hgvsc: ENST00000528698.1:n.96G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525070
  gene symbol: SIGIRR
  hgvsc: ENST00000525070.1:n.276G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000526788
  gene symbol: SIGIRR
  hgvsc: ENST00000526788.1:n.102-1713G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000529486
  gene symbol: SIGIRR
  hgvsc: ENST00000529486.1:n.276G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527136
  gene symbol: SIGIRR
  hgvsc: ENST00000527136.1:n.178-1026G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000534217
  gene symbol: SIGIRR
  hgvsc: ENST00000534217.1:n.271G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000333656
  ensembl transcript: ENST00000332725
  gene symbol: SIGIRR
  hgvsc: ENST00000332725.3:c.-45G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000403104
  ensembl transcript: ENST00000431843
  gene symbol: SIGIRR
  hgvsc: ENST00000431843.2:c.-45G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000371960
  ensembl transcript: ENST00000382520
  gene symbol: SIGIRR
  hgvsc: ENST00000382520.2:c.-45G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000380756
  ensembl transcript: ENST00000397632
  gene symbol: SIGIRR
  hgvsc: ENST00000397632.3:c.-45G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000433022
  ensembl transcript: ENST00000531205
  gene symbol: SIGIRR
  hgvsc: ENST00000531205.1:c.-45G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000527295
  gene symbol: SIGIRR
  hgvsc: ENST00000527295.1:n.271G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000528116
  gene symbol: SIGIRR
  hgvsc: ENST00000528116.1:n.291G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000185187
  ensembl protein: ENSP00000434030
  ensembl transcript: ENST00000530494
  gene symbol: SIGIRR
  hgvsc: ENST00000530494.1:c.-45G>A
  variant of: http://identifiers.org/hgnc/30575
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000185187
  ensembl transcript: ENST00000525299
  gene symbol: SIGIRR
  hgvsc: ENST00000525299.1:n.110-1713G>A
  variant of: http://identifiers.org/hgnc/30575
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ

11-418322-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418322
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418322
    reference: chr 11
allele count: 1
allele frequency: 3.065415976948072e-5
allele num: 32622
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1771C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5103C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.*49C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2479C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2509C>T
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15029
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11033
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4193
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8574
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2300
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2153
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6101
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10638
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15989
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD

11-418326-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418326
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418326
    reference: chr 11
allele count: 2
allele frequency: 6.089392278650591e-5
allele num: 32844
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1767C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5099C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2505C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2475C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.*45C>T
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14805
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11097
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27633
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10911
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1747
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5819
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6813
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4549
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2273
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

11-418332-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418332
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418333
    reference: chr 11
allele count: 19
allele frequency: 5.643676112398265e-4
allele num: 33666
alternate allele: CT
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.*38dupA
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2468dupA
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1760dupA
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2498dupA
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5092dupA
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11368
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 28362
  bin: 7.5e0
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13722
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10829
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4511
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2235
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4705
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1462
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1842
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21659
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4304
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4646
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 9.75e1
  variant carriers: 21
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

11-418332-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418332
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418332
    reference: chr 11
allele count: 1
allele frequency: 2.970355848630666e-5
allele num: 33666
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2469G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5093G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1761G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.*39G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2499G>A
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13722
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11368
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1462
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2235
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21659
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4304
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10829
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4511
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4705
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum

11-418333-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418333
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418333
    reference: chr 11
allele count: 1
allele frequency: 2.945334590009425e-5
allele num: 33952
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5092A>C
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2498A>C
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2468A>C
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1760A>C
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.*38A>C
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13391
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2138
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4372
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2225
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22971
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3765
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4356
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10730
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1224
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2056
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

11-418343-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418343
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418343
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 36968
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1750G>C
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2458G>C
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2488G>C
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.*28G>C
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5082G>C
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11656
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1903
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30824
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9856
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4415
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2129
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27991
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3278
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4752
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

11-418349-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418349
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418349
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 40100
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.*22C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5076C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2482C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2452C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1744C>T
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7675
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11505
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31539
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1497
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4629
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4413
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4884
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1312
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 30045
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7109
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1996
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP

11-418350-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418350
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418350
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 40946
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.*21C>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5075C>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1743C>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2481C>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2451C>G
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11442
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31591
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1396
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6785
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4647
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4415
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4864
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2048
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1594
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29942
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

11-418353-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418353
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418353
    reference: chr 11
allele count: 1
allele frequency: 2.335248236887581e-5
allele num: 42822
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5072A>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2448A>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.*18A>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1740A>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2478A>G
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31669
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6442
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11006
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6472
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4309
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1225
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30600
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4405
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6072
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6024
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1973
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1112
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

11-418354-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418354
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418354
    reference: chr 11
allele count: 1
allele frequency: 2.294735875900684e-5
allele num: 43578
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.*17G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2477G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5071G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1739G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2447G>A
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 31701
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10935
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4370
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1983
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5770
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4274
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1281
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6142
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30647
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

11-418360-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418360
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418360
    reference: chr 11
allele count: 15
allele frequency: 2.972533787800721e-4
allele num: 50462
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1733C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2441C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.*11C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2471C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5065C>T
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11090
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9536
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29970
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2127
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4226
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3651
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29869
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1771
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4201
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3704
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

11-418368-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418368
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418368
    reference: chr 11
allele count: 1
allele frequency: 1.588360494297786e-5
allele num: 62958
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1725C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5057C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2463C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2433C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.*3C>T
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25589
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18031
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2212
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1921
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25865
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2792
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2739
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2929
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/11-418369-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418369
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418369
    reference: chr 11
allele count: 4
allele frequency: 6.164088023176972e-5
allele num: 64892
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2462G>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.*2G>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1724G>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2432G>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5056G>T
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24786
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18796
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7226
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2047
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2556
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1591
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2674
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2851
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25069
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

11-418371-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418371
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418371
    reference: chr 11
allele count: 2
allele frequency: 2.901746851604666e-5
allele num: 68924
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_retained_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2349G>A
  hgvsp: ENST00000332826.6:c.2349G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1722G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2460G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5054G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2430G>A
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: stop retained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23319
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20849
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2188
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1537
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2237
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2447
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2629
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23716
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19617
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ter783Ter
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-418376-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418376
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418376
    reference: chr 11
allele count: 1
allele frequency: 1.305926293519994e-5
allele num: 76574
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5049G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2455G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2344G>A
  hgvsp: ENSP00000332788.6:p.Val782Met
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2425G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1717G>A
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5667
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19945
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 767
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20382
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1353
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2046
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1768
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val782Met
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

11-418377-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418377
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418377
    reference: chr 11
allele count: 2
allele frequency: 2.514647823572309e-5
allele num: 79534
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2454C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5048C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2424C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1716C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2343C>T
  hgvsp: ENST00000332826.6:c.2343C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5257
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18683
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26488
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19170
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3040
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2079
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1297
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25203
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1884
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asp781Asp
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

11-418385-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418385
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418385
    reference: chr 11
allele count: 3
allele frequency: 3.249918752031199e-5
allele num: 92310
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2446A>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5040A>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2335A>T
  hgvsp: ENSP00000332788.6:p.Ser779Cys
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1708A>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2416A>T
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5599
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1422
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3966
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13574
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31775
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1282
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser779Cys
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP

11-418406-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418406
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418406
    reference: chr 11
allele count: 1
allele frequency: 8.911385185713268e-6
allele num: 112216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1687G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2395G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5019G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2314G>A
  hgvsp: ENSP00000332788.6:p.Ala772Thr
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2425G>A
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9098
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4046
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40187
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5782
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2212
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1387
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala772Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

11-418410-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418410
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418410
    reference: chr 11
allele count: 1
allele frequency: 8.738661586591398e-6
allele num: 114434
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2391C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5015C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2421C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2310C>T
  hgvsp: ENST00000332826.6:c.2310C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1683C>T
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2783
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6076
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2977
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2013
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41126
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr770Thr
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

11-418413-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418413
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418413
    reference: chr 11
allele count: 19
allele frequency: 1.641270170346567e-4
allele num: 115764
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5012C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1680C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2418C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2388C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2307C>T
  hgvsp: ENST00000332826.6:c.2307C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9972
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 41524
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3921
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2139
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2320
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2442
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6314
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 9.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro769Pro
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

11-418414-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418414
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418414
    reference: chr 11
allele count: 161
allele frequency: 1.385399098199842e-3
allele num: 116212
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1679C>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2417C>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2387C>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2306C>G
  hgvsp: ENSP00000332788.6:p.Pro769Arg
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5011C>G
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 3.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 3.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 10040
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41504
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.25e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41464
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2157
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 9.75e1
  variant carriers: 159
genotype quality: GenotypeQuality
  all individuals: 2477
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro769Arg
num of homozygotes: 2
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

11-418417-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418417
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418417
    reference: chr 11
allele count: 1
allele frequency: 8.536356341659126e-6
allele num: 117146
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5008A>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2303A>T
  hgvsp: ENSP00000332788.6:p.His768Leu
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2414A>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1676A>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2384A>T
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41735
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41963
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2560
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1648
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2211
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
hgvs: p.His768Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

11-418419-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418419
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418419
    reference: chr 11
allele count: 31
allele frequency: 2.635740643120717e-4
allele num: 117614
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2382C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2301C>T
  hgvsp: ENST00000332826.6:c.2301C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2412C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1674C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5006C>T
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41724
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4252
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10369
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 9.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2229
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6510
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1660
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42018
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2579
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala767Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-418421-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418421
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418421
    reference: chr 11
allele count: 4
allele frequency: 3.389600705036947e-5
allele num: 118008
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5004G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2299G>A
  hgvsp: ENSP00000332788.6:p.Ala767Thr
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1672G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2410G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2380G>A
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41647
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10535
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1692
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2605
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1224
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2264
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala767Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

11-418423-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418423
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418423
    reference: chr 11
allele count: 29
allele frequency: 2.450152078404866e-4
allele num: 118360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.5002C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2378C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1670C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2297C>T
  hgvsp: ENSP00000332788.6:p.Pro766Leu
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2408C>T
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4443
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2285
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 9.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1043
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro766Leu
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

11-418427-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418427
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418427
    reference: chr 11
allele count: 17
allele frequency: 1.430446635926088e-4
allele num: 118844
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2404A>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.4998A>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1666A>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2374A>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2293A>G
  hgvsp: ENSP00000332788.6:p.Met765Val
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 41678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10790
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4543
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1718
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6729
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 9.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2310
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Met765Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: African
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

11-418432-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418432
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418432
    reference: chr 11
allele count: 1
allele frequency: 8.39630562552477e-6
allele num: 119100
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2288C>G
  hgvsp: ENSP00000332788.6:p.Pro763Arg
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1661C>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.4993C>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2369C>G
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2399C>G
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2335
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1736
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42757
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2722
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6788
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro763Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

11-418434-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418434
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418434
    reference: chr 11
allele count: 1
allele frequency: 8.390106386548982e-6
allele num: 119188
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2286G>A
  hgvsp: ENST00000332826.6:c.2286G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2367G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.4991G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1659G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2397G>A
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10919
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42747
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2362
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg762Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

11-418435-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418435
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418435
    reference: chr 11
allele count: 1
allele frequency: 8.385322331790435e-6
allele num: 119256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.4990G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2285G>A
  hgvsp: ENSP00000332788.6:p.Arg762Gln
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2366G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2396G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1658G>A
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41580
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6802
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42789
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2726
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2361
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg762Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS

11-418438-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418438
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418438
    reference: chr 11
allele count: 2
allele frequency: 1.674116485025028e-5
allele num: 119466
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2363C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1655C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2393C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2282C>T
  hgvsp: ENSP00000332788.6:p.Ser761Phe
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.4987C>T
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11027
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43043
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1080
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2743
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser761Phe
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum

11-418444-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418444
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418444
    reference: chr 11
allele count: 1
allele frequency: 8.360085607276618e-6
allele num: 119616
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2357C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2276C>T
  hgvsp: ENSP00000332788.6:p.Ala759Val
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.4981C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1649C>T
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2387C>T
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6914
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2745
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43135
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala759Val
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

11-418444-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418444
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418443
    reference: chr 11
allele count: 1
allele frequency: 8.360085607276618e-6
allele num: 119616
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2275delG
  hgvsp: ENSP00000332788.6:p.Ala759GlnfsTer36
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1648delG
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2356delG
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.4980delG
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2386delG
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11110
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4749
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43135
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6914
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2384
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala759GlnfsTer36
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: GC
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/11-418446-CCCCACCCCA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418446
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418437
    reference: chr 11
allele count: 1
allele frequency: 8.354916868577158e-6
allele num: 119690
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsp: ENSP00000332788.6:p.Gly756_Gly758del
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6938
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2756
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1752
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly756_Gly758del
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: CCCCACCCCA
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS

11-418454-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 418454
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 418454
    reference: chr 11
allele count: 1
allele frequency: 8.345155637152633e-6
allele num: 119830
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000526142
  gene symbol: ANO9
  hgvsc: ENST00000526142.1:n.2347G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000185101
  ensembl protein: ENSP00000332788
  ensembl transcript: ENST00000332826
  gene symbol: ANO9
  hgvsc: ENST00000332826.6:c.2266G>A
  hgvsp: ENSP00000332788.6:p.Gly756Arg
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000532094
  gene symbol: ANO9
  hgvsc: ENST00000532094.1:n.4971G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000528927
  gene symbol: ANO9
  hgvsc: ENST00000528927.1:n.2377G>A
  variant of: http://identifiers.org/hgnc/20679
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000185101
  ensembl transcript: ENST00000534161
  gene symbol: ANO9
  hgvsc: ENST00000534161.1:n.1639G>A
  variant of: http://identifiers.org/hgnc/20679
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4782
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41627
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly756Arg
num of homozygotes: 0
reference allele: C

GenotypeDepth
all individuals: 68
bin: 9.75e1
variant carriers: 8

GenotypeDepth
all individuals: 355
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 20185
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 530
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 14751
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 370
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 368
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7564
bin: 3.75e1
variant carriers: 4

GenotypeDepth
all individuals: 683
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 33
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 50
bin: 7.75e1
variant carriers: 3

GenotypeDepth
all individuals: 7075
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 7.25e1
variant carriers: 3

GenotypeDepth
all individuals: 164
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10014
bin: 9.75e1
variant carriers: 31

GenotypeQuality
all individuals: 102
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22258
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 345
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8850
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2839
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4113
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1996
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3804
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5271
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 9.551927752691906e-4
allele num: 11516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 3.064194882794546e-4
allele num: 65270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

DP
type: SiteQuality
SIO_000300: 1.930829e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.14e0

FS
type: SiteQuality
SIO_000300: 5.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.25e-1

QD
type: SiteQuality
SIO_000300: 1.207e1

MQ
type: SiteQuality
SIO_000300: 5.965e1

GenotypeDepth
all individuals: 4400
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7557
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 33
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 549
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7032
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 60
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 392
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 450
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2504
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 84
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 681
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4112
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22164
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3783
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1995
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2836
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5261
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 372
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8839
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9985
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.688097306689835e-5
allele num: 11510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

DP
type: SiteQuality
SIO_000300: 1.926961e6

MQ
type: SiteQuality
SIO_000300: 5.914e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.247e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.583e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.4e-1

GenotypeDepth
all individuals: 130
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7553
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 163
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2504
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1310
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 20085
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7009
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 60
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 352
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 85
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 33
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4108
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3774
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9984
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 5255
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8808
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2836
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22126
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1993
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.666355576294914e-4
allele num: 8572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65178
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.92e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

VQSLOD
type: SiteQuality
SIO_000300: 6.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.91e-1

FS
type: SiteQuality
SIO_000300: 9.48e-1

DP
type: SiteQuality
SIO_000300: 1.924571e6

QD
type: SiteQuality
SIO_000300: 1.333e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.14e-1

GenotypeDepth
all individuals: 14680
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2502
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 681
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 352
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 7547
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 403
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4398
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 7.75e1
variant carriers: 7

GenotypeDepth
all individuals: 84
bin: 7.25e1
variant carriers: 2

GenotypeDepth
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 169
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1309
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 33
bin: 8.25e1
variant carriers: 3

GenotypeDepth
all individuals: 19949
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3770
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5243
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9979
bin: 9.75e1
variant carriers: 25

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4098
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 852
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8779
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1989
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2834
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21956
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.681907571288102e-5
allele num: 65088
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Latino
type: Population
allele count: 19
allele frequency: 1.652173913043478e-3
allele num: 11500
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.269e1

FS
type: SiteQuality
SIO_000300: 4.62e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

DP
type: SiteQuality
SIO_000300: 1.921541e6

MQRankSum
type: SiteQuality
SIO_000300: 2.29e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

GenotypeDepth
all individuals: 4392
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 425
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 733
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1307
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14639
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 82
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 30
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6953
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 679
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7539
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21859
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3763
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1986
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9949
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 8749
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4087
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5221
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2834
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10076
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.524390243902439e-4
allele num: 6560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.077207126811705e-5
allele num: 64994
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.070000000000001e-1

FS
type: SiteQuality
SIO_000300: 4.857e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.409e1

DP
type: SiteQuality
SIO_000300: 1.916358e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.34e-1

GenotypeDepth
all individuals: 582
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 679
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14361
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 81
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1774
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 526
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2495
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 351
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1555
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2823
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9936
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 576
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8469
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5167
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1973
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3699
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20309
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4043
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.547795938583457e-5
allele num: 64608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9964
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.070171178827243e-5
allele num: 16474
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-1

FS
type: SiteQuality
SIO_000300: 1.746e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.43e-1

QD
type: SiteQuality
SIO_000300: 9.960000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 3.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.17e-1

DP
type: SiteQuality
SIO_000300: 1.889956e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.6e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 580
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1773
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 824
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1303
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 81
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 529
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7491
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 25
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4041
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5162
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 9935
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1974
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1567
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2823
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20405
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3696
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8461
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.09607108579213e-5
allele num: 64598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.496e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.44e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

MQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

DP
type: SiteQuality
SIO_000300: 1.889754e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

QD
type: SiteQuality
SIO_000300: 1.315e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.78e0

GenotypeDepth
all individuals: 540
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 18708
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 349
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1302
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 680
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 162
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2087
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2494
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 496
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4029
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2818
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9932
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1967
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8300
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5133
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3658
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19841
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1723
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.085103084793055e-4
allele num: 64510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9934
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.068e1

DP
type: SiteQuality
SIO_000300: 1.879963e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.822e0

MQRankSum
type: SiteQuality
SIO_000300: 3.94e-1

FS
type: SiteQuality
SIO_000300: 4.083e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 161
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 992
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6313
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 677
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2355
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 549
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4359
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2490
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1963
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8238
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1840
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3654
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19516
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2815
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9926
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 5121
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4018
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.520300398967379e-4
allele num: 8522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55115716324378e-5
allele num: 64468
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.37e-1

DP
type: SiteQuality
SIO_000300: 1.872083e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.93e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

QD
type: SiteQuality
SIO_000300: 1.42e1

FS
type: SiteQuality
SIO_000300: 4.404e0

MQRankSum
type: SiteQuality
SIO_000300: 3.09e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

GenotypeDepth
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7431
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 900
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14005
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 549
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1302
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 350
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 992
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3654
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9926
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8238
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1840
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5121
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19516
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4018
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2815
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1963
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.007049345417925e-4
allele num: 9930
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64468
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

DP
type: SiteQuality
SIO_000300: 1.872083e6

QD
type: SiteQuality
SIO_000300: 1.42e1

MQRankSum
type: SiteQuality
SIO_000300: 3.09e-1

FS
type: SiteQuality
SIO_000300: 4.404e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

GenotypeDepth
all individuals: 80
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1178
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7376
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6367
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 18251
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1302
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2485
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 560
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 348
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8120
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1960
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1906
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3624
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5087
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2803
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9914
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 941
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19414
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4006
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.552602161222208e-5
allele num: 64408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9918
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.864557e6

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e0

QD
type: SiteQuality
SIO_000300: 8.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 9.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.247e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e0

FS
type: SiteQuality
SIO_000300: 1.347e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2984
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1301
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1908
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2474
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6274
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7311
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 348
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1245
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9906
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7893
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2798
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5042
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2049
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3581
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4002
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18291
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.011736139214893e-4
allele num: 9884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.83e-1

DP
type: SiteQuality
SIO_000300: 1.846254e6

FS
type: SiteQuality
SIO_000300: 2.362e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.154e0

QD
type: SiteQuality
SIO_000300: 1.272e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.01e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

VQSLOD
type: SiteQuality
SIO_000300: 8.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

GenotypeDepth
all individuals: 3243
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2462
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 30
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7124
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6364
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 677
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4291
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16757
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3971
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2194
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1642
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1449
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9899
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 158
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7392
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4967
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2787
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3481
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16965
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.176470588235294e-4
allele num: 8500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64206
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.75e-1

FS
type: SiteQuality
SIO_000300: 1.483e0

QD
type: SiteQuality
SIO_000300: 1.203e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.07e0

DP
type: SiteQuality
SIO_000300: 1.818795e6

MQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.39e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

GenotypeDepth
all individuals: 2462
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3243
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 348
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12613
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 619
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3353
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1300
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 677
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16965
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2787
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3481
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3971
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1642
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2194
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4967
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7392
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9899
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1449
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64206
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9850
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.176470588235294e-4
allele num: 8500
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6450
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11416
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.07e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.39e0

DP
type: SiteQuality
SIO_000300: 1.818795e6

FS
type: SiteQuality
SIO_000300: 1.483e0

MQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.75e-1

QD
type: SiteQuality
SIO_000300: 1.203e1

GenotypeDepth
all individuals: 348
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3369
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 993
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 16762
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4292
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6414
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7108
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2460
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4950
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17198
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7358
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3956
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9893
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 102
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1946
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3457
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1042
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2218
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1462
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2785
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.015434606011373e-4
allele num: 9848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.445e0

VQSLOD
type: SiteQuality
SIO_000300: 7.41e-1

FS
type: SiteQuality
SIO_000300: 4.529e0

DP
type: SiteQuality
SIO_000300: 1.817769e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

QD
type: SiteQuality
SIO_000300: 1.434e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.82e-1

GenotypeDepth
all individuals: 6128
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14629
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2451
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 348
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1298
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11359
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7013
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3332
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2102
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3901
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1250
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4837
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1935
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9882
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1644
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13799
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2291
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2305
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.563183892953167e-5
allele num: 63972
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.774618e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.97e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e-1

QD
type: SiteQuality
SIO_000300: 1.283e1

GenotypeDepth
all individuals: 6128
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 80
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6947
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6827
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14629
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1298
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 348
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2102
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7013
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1644
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9882
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2291
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4837
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2305
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3332
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1935
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3901
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13799
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2771
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1250
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63972
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.215657670799903e-4
allele num: 16452
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.774618e6

VQSLOD
type: SiteQuality
SIO_000300: 2.97e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.46e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

QD
type: SiteQuality
SIO_000300: 1.283e1

GenotypeDepth
all individuals: 80
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 347
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 675
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 1236
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 161
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2448
bin: 4.75e1
variant carriers: 4

GenotypeDepth
all individuals: 14
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6844
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3442
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2253
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11295
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2787
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2302
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3182
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1738
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3834
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4685
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2689
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6483
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2750
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1422
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1696
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1912
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9875
bin: 9.75e1
variant carriers: 23

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.781173164734808e-5
allele num: 11388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 3.45108866160507e-4
allele num: 63748
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6382
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.44e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.263e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.747789e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.95e0

MQRankSum
type: SiteQuality
SIO_000300: 2.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.676e0

GenotypeDepth
all individuals: 8389
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 103
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 172
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 876
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2158
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7443
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.05e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.7896e4

VQSLOD
type: SiteQuality
SIO_000300: 2.95e0

QD
type: SiteQuality
SIO_000300: 1.226e1

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5614
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3168
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.5e-3
allele num: 400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 142
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.897e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.950000000000001e-2

DP
type: SiteQuality
SIO_000300: 4.2654e4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 1.438e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.531e0

GenotypeDepth
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5370
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 388
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2787
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4813
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 669
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.64e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.75e0

MQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.728e1

VQSLOD
type: SiteQuality
SIO_000300: -2.782e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 5.97e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.754e0

DP
type: SiteQuality
SIO_000300: 4.0065e4

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2578
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 412
bin: 1.25e1
variant carriers: 2

GenotypeDepth
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2283
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 53
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5262
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 244
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.162790697674419e-2
allele num: 172
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.7757e4

FS
type: SiteQuality
SIO_000300: 5.529e0

VQSLOD
type: SiteQuality
SIO_000300: -1.516e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.950000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.374e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

GenotypeDepth
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 155
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19765
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 954
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 67
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 252
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 343
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 119
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 49
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 261
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 536
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2355
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 214
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21992
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 816
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8525
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4504
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1099
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9197
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6362
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1792
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2918
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8660
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.15e-2

DP
type: SiteQuality
SIO_000300: 4.21004e5

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

VQSLOD
type: SiteQuality
SIO_000300: -2.157e0

MQRankSum
type: SiteQuality
SIO_000300: 9.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.88e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.34e0

GenotypeDepth
all individuals: 84
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 49
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 953
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 155
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1257
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 214
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2346
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 58
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 67
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 535
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6315
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9829
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 612
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4180
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7872
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22424
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1097
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 296
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1802
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2918
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.158748551564311e-4
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.621e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.36e-2

FS
type: SiteQuality
SIO_000300: 6.188e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

DP
type: SiteQuality
SIO_000300: 4.21956e5

QD
type: SiteQuality
SIO_000300: 1.305e1

VQSLOD
type: SiteQuality
SIO_000300: 5.27e-1

MQ
type: SiteQuality
SIO_000300: 5.789e1

GenotypeDepth
all individuals: 84
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27313
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2328
bin: 1.25e1
variant carriers: 3

GenotypeDepth
all individuals: 340
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 165
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 215
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 49
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 931
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3083
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1413
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3544
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18800
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2016
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24365
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 221
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1093
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 780
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2948
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 6.852444038373687e-4
allele num: 8756
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 236
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.12e0

QD
type: SiteQuality
SIO_000300: 1.159e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 5.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.62e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.48275e5

GenotypeDepth
all individuals: 120
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 49
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1248
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 214
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 154
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 528
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 931
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25164
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 917
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 66
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 85
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2124
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22066
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1151
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1086
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2199
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2565
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23389
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 266
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2984
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 926
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.121327651939897e-4
allele num: 8918
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.63e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.52e-1

FS
type: SiteQuality
SIO_000300: 1.134e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.91e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.383e0

DP
type: SiteQuality
SIO_000300: 4.61661e5

GenotypeDepth
all individuals: 227
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1307
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28973
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 523
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 154
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 334
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 85
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 884
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 214
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2804
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1218
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 49
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19712
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 66
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27592
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 508
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1150
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 889
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1671
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2437
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18931
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1082
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1154
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3128
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1136
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.511e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.754999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.73e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.87e5

QD
type: SiteQuality
SIO_000300: 7.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

GenotypeDepth
all individuals: 864
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3222
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 254
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 214
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 154
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1157
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 66
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 49
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 85
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26512
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1063
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18840
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 708
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2161
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1082
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 95
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1232
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 382
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 8.403361344537816e-4
allele num: 1190
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.252e0

QD
type: SiteQuality
SIO_000300: 3.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.79e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.93e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

DP
type: SiteQuality
SIO_000300: 4.8292e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

FS
type: SiteQuality
SIO_000300: 6.739e0

GenotypeDepth
all individuals: 213
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 991
bin: 2.25e1
variant carriers: 2

GenotypeDepth
all individuals: 27676
bin: 7.5e0
variant carriers: 9

GenotypeDepth
all individuals: 154
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 483
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 85
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 120
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3517
bin: 1.25e1
variant carriers: 7

GenotypeDepth
all individuals: 57
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 326
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 38
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 49
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 66
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1572
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1136
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1988
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2151
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 187
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19477
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25597
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 203
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1089
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 214
bin: 7.25e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 2
allele frequency: 5.050505050505051e-3
allele num: 396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 8.916187834357044e-4
allele num: 10094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1204
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 6.317119393556538e-4
allele num: 3166
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

FS
type: SiteQuality
SIO_000300: 3.37e0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 1.316e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

DP
type: SiteQuality
SIO_000300: 4.75292e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.93e-2

GenotypeDepth
all individuals: 955
bin: 2.25e1
variant carriers: 2

GenotypeDepth
all individuals: 50
bin: 7.75e1
variant carriers: 4

GenotypeDepth
all individuals: 68
bin: 7.25e1
variant carriers: 4

GenotypeDepth
all individuals: 323
bin: 4.25e1
variant carriers: 4

GenotypeDepth
all individuals: 804
bin: 3.25e1
variant carriers: 4

GenotypeDepth
all individuals: 83
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 4.75e1
variant carriers: 6

GenotypeDepth
all individuals: 3631
bin: 1.25e1
variant carriers: 53

GenotypeDepth
all individuals: 28
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 482
bin: 3.75e1
variant carriers: 4

GenotypeDepth
all individuals: 1069
bin: 2.75e1
variant carriers: 4

GenotypeDepth
all individuals: 118
bin: 6.25e1
variant carriers: 2

GenotypeDepth
all individuals: 20
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 55
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 572
bin: 3.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1607
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 255
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19564
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 212
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 1993
bin: 1.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1948
bin: 6.25e1
variant carriers: 9

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 5

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 147
bin: 9.25e1
variant carriers: 6

GenotypeQuality
all individuals: 673
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1208
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25525
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 103
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 203
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1158
bin: 9.75e1
variant carriers: 120

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1200
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.012841091492777e-3
allele num: 1246
num of homozygotes: 0

African
type: Population
allele count: 123
allele frequency: 3.810408921933085e-2
allele num: 3228
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.85e-2

DP
type: SiteQuality
SIO_000300: 4.74325e5

FS
type: SiteQuality
SIO_000300: 3.606e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.98e-1

QD
type: SiteQuality
SIO_000300: 1.536e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.15e-1

GenotypeDepth
all individuals: 454
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 65
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26842
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 87
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 306
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 828
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 506
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 744
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3746
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 116
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 146
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 569
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24205
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 890
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1871
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1179
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20115
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2526
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1685
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 9.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1244
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3170
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.221e0

DP
type: SiteQuality
SIO_000300: 4.62459e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.221e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.636e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.03e-2

QD
type: SiteQuality
SIO_000300: 8.890000000000001e0

GenotypeDepth
all individuals: 209
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 601
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 116
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 248
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3955
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 39
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 412
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 293
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 146
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 65
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1511
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2278
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22899
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2117
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 95
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21154
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1400
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1052
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 548
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9964
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 1.275510204081633e-3
allele num: 3136
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1198
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.26e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

DP
type: SiteQuality
SIO_000300: 4.52421e5

FS
type: SiteQuality
SIO_000300: 1.313e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.84e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.5e0

QD
type: SiteQuality
SIO_000300: 1.195e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 607
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3939
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 25066
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 719
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 248
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 289
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 146
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 65
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 390
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 116
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21701
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2814
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1713
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20249
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 728
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3225
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1048
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1235
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1166
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 116
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3074
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.077274615704196e-4
allele num: 9628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.46e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.52e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.555e0

FS
type: SiteQuality
SIO_000300: 6.511e0

MQ
type: SiteQuality
SIO_000300: 5.833e1

DP
type: SiteQuality
SIO_000300: 4.42527e5

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.15e0

GenotypeDepth
all individuals: 375
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 44
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 22741
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 24375
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 26
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 285
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 611
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 497
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 65
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 39
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 507
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 116
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13388
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2741
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5589
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3899
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23635
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8928
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1062
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2968
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1108
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 1.923076923076923e-2
allele num: 104
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

FS
type: SiteQuality
SIO_000300: 2.216e0

DP
type: SiteQuality
SIO_000300: 4.14504e5

VQSLOD
type: SiteQuality
SIO_000300: -7.993e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.08e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.2e-1

QD
type: SiteQuality
SIO_000300: 1.521e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 827
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4528
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1746
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.141327623126338e-4
allele num: 4670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1174
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1878
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

DP
type: SiteQuality
SIO_000300: 4.99203e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.67e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.82e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.262e0

QD
type: SiteQuality
SIO_000300: 1.267e1

VQSLOD
type: SiteQuality
SIO_000300: 4.02e-1

GenotypeQuality
all individuals: 642
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 300
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 375
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4256
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18101
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.124859392575928e-3
allele num: 1778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1174
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3810
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4726
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.17e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.495e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.57e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.21e-1

DP
type: SiteQuality
SIO_000300: 5.04463e5

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 146
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 75
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 102
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 59
bin: 8.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 8.638211382113821e-4
allele num: 19680
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1972
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3886
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.094091903719912e-3
allele num: 1828
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.1e-2

DP
type: SiteQuality
SIO_000300: 5.21319e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.397e1

MQRankSum
type: SiteQuality
SIO_000300: 5.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.33e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 146
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1842
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4646
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1972
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.08130081300813e-5
allele num: 19680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.33e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.1e-2

DP
type: SiteQuality
SIO_000300: 5.21319e5

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.397e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.54e0

MQRankSum
type: SiteQuality
SIO_000300: 5.36e-1

GenotypeQuality
all individuals: 4677
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 71
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4914
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.554931016862545e-4
allele num: 3914
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19822
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1992
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1848
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.54e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.451e1

DP
type: SiteQuality
SIO_000300: 5.25783e5

VQSLOD
type: SiteQuality
SIO_000300: -2.149e0

MQ
type: SiteQuality
SIO_000300: 5.811e1

MQRankSum
type: SiteQuality
SIO_000300: -7.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.35e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.079e0

GenotypeQuality
all individuals: 529
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8746
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2371
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2066
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 21546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2222
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.72124e5

MQ
type: SiteQuality
SIO_000300: 5.616e1

VQSLOD
type: SiteQuality
SIO_000300: -9.464e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.03e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 9.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.231e0

GenotypeQuality
all individuals: 639
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23148
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5952
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.69e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.82e1

VQSLOD
type: SiteQuality
SIO_000300: 2.85e0

DP
type: SiteQuality
SIO_000300: 6.10599e5

GenotypeQuality
all individuals: 274
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 521
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 23612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.15834e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

QD
type: SiteQuality
SIO_000300: 1.178e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.62e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.159e0

GenotypeQuality
all individuals: 136
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.057124310288867e-5
allele num: 24648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1664
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4514
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.46e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.1e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 6.39973e5

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.565e1

GenotypeQuality
all individuals: 234
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6536
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.98851308232291e-5
allele num: 25072
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1706
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 332
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.699e0

VQSLOD
type: SiteQuality
SIO_000300: -3.749e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.152e0

DP
type: SiteQuality
SIO_000300: 6.46993e5

QD
type: SiteQuality
SIO_000300: 4.12e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.36e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.586e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQ
type: SiteQuality
SIO_000300: 5.883e1

GenotypeQuality
all individuals: 1253
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10603
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3212
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.376083665886886e-4
allele num: 29068
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.525252525252525e-3
allele num: 396
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.950838860710105e-4
allele num: 5126
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 1.218191662154846e-3
allele num: 7388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2082
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3190
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.176e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.86e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.71e0

DP
type: SiteQuality
SIO_000300: 7.29949e5

GenotypeQuality
all individuals: 509
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1579
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16772
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.760448296803401e-5
allele num: 36226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2792
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5976
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4184
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8932
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.263e1

MQRankSum
type: SiteQuality
SIO_000300: -2.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.006e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.27e0

DP
type: SiteQuality
SIO_000300: 8.49821e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

GenotypeQuality
all individuals: 564
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 755
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17183
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.366534292154127e-5
allele num: 37268
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4326
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4628
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.277613897082924e-4
allele num: 6102
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9192
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.054e0

QD
type: SiteQuality
SIO_000300: 1.461e1

FS
type: SiteQuality
SIO_000300: 8.476000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

DP
type: SiteQuality
SIO_000300: 8.67629e5

MQRankSum
type: SiteQuality
SIO_000300: 6.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.2e-1

GenotypeQuality
all individuals: 667
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 225
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5080
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4646
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.136762860727729e-4
allele num: 6376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3160
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.243e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

MQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

DP
type: SiteQuality
SIO_000300: 9.03352e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.992e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.26e-1

GenotypeQuality
all individuals: 674
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23120
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2781
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10674
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.439263097294185e-4
allele num: 6948
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43534
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

DP
type: SiteQuality
SIO_000300: 9.79157e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.062e0

VQSLOD
type: SiteQuality
SIO_000300: 3.59e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

QD
type: SiteQuality
SIO_000300: 1.369e1

GenotypeQuality
all individuals: 171
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.44642063139173e-5
allele num: 44980
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7154
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

QD
type: SiteQuality
SIO_000300: 1.378e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

DP
type: SiteQuality
SIO_000300: 1.007312e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.07e0

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.139999999999999e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 877
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1172
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1320
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6424
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.84066661474963e-5
allele num: 51364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8126
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8192
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

QD
type: SiteQuality
SIO_000300: 1.315e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.543e0

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.125263e6

GenotypeQuality
all individuals: 1880
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 825
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 327
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6072
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9662
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7940
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.375924509053813e-5
allele num: 15684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10788
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.301e0

DP
type: SiteQuality
SIO_000300: 1.340235e6

MQRankSum
type: SiteQuality
SIO_000300: -8.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.602e0

QD
type: SiteQuality
SIO_000300: 1.633e1

VQSLOD
type: SiteQuality
SIO_000300: -3.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.61e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

GenotypeQuality
all individuals: 63
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 210
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8116
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11040
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6216
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.272738677706687e-5
allele num: 15942
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

VQSLOD
type: SiteQuality
SIO_000300: -1.919e0

QD
type: SiteQuality
SIO_000300: 1.07e1

DP
type: SiteQuality
SIO_000300: 1.367569e6

FS
type: SiteQuality
SIO_000300: 1.3452e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.161e0

GenotypeQuality
all individuals: 175
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41306
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1573
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 19
allele frequency: 1.700984780662489e-3
allele num: 11170
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9932
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16072
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.43e0

FS
type: SiteQuality
SIO_000300: 3.166e0

QD
type: SiteQuality
SIO_000300: 1.268e1

MQRankSum
type: SiteQuality
SIO_000300: -1.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.86e-1

DP
type: SiteQuality
SIO_000300: 1.386724e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1586
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6326
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.576690211907164e-5
allele num: 63424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8260
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.452359750667854e-4
allele num: 11230
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.480278422273782e-3
allele num: 862
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9964
num of homozygotes: 0

South Asian
type: Population
allele count: 152
allele frequency: 9.421098301723069e-3
allele num: 16134
num of homozygotes: 2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.95e0

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

QD
type: SiteQuality
SIO_000300: 1.495e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 6.55e-1

DP
type: SiteQuality
SIO_000300: 1.394425e6

GenotypeQuality
all individuals: 6458
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1638
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63930
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11318
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10028
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.156119182467373e-5
allele num: 16244
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8370
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.405672e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.24e0

VQSLOD
type: SiteQuality
SIO_000300: 5.08e-1

QD
type: SiteQuality
SIO_000300: 1.361e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.925e1

GenotypeQuality
all individuals: 627
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.116235587410408e-4
allele num: 6418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 25
allele frequency: 3.89529448426301e-4
allele num: 64180
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.517411185367569e-4
allele num: 11372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.75e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.363e0

QD
type: SiteQuality
SIO_000300: 1.454e1

DP
type: SiteQuality
SIO_000300: 1.41281e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.41e-1

GenotypeQuality
all individuals: 6566
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42218
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64382
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.96589331746976e-4
allele num: 10086
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.389e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.814e0

DP
type: SiteQuality
SIO_000300: 1.42002e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.02e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

MQRankSum
type: SiteQuality
SIO_000300: 4.81e-1

GenotypeQuality
all individuals: 2642
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42271
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6618
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 5.253940455341507e-4
allele num: 11420
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.055114261273371e-4
allele num: 16366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 2.787413280475718e-4
allele num: 64576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.597e0

MQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

MQ
type: SiteQuality
SIO_000300: 5.981e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.19e0

QD
type: SiteQuality
SIO_000300: 1.433e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

DP
type: SiteQuality
SIO_000300: 1.425761e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

GenotypeQuality
all individuals: 649
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2678
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42636
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.079447322970639e-4
allele num: 64848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.664179104477612e-4
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.654525520769887e-4
allele num: 16418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10144
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.37e-1

DP
type: SiteQuality
SIO_000300: 1.433231e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

QD
type: SiteQuality
SIO_000300: 1.488e1

FS
type: SiteQuality
SIO_000300: 1.263e0

VQSLOD
type: SiteQuality
SIO_000300: 4.14e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.61e-1

GenotypeQuality
all individuals: 659
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 694
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1057
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539314081645219e-5
allele num: 64964
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.15e-1

DP
type: SiteQuality
SIO_000300: 1.439016e6

FS
type: SiteQuality
SIO_000300: 6.715e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

QD
type: SiteQuality
SIO_000300: 1.219e1

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.76e-1

GenotypeQuality
all individuals: 2726
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6789
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1736
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 696
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65010
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162520344106022e-4
allele num: 8602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.559e1

MQRankSum
type: SiteQuality
SIO_000300: -1.087e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.98e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.237e0

VQSLOD
type: SiteQuality
SIO_000300: -2.33e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.05e-1

DP
type: SiteQuality
SIO_000300: 1.440921e6

GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 668
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537089981247502e-5
allele num: 65058
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.961e1

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.011e0

QD
type: SiteQuality
SIO_000300: 1.411e1

DP
type: SiteQuality
SIO_000300: 1.442716e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.13e-1

FS
type: SiteQuality
SIO_000300: 3.34e0

GenotypeQuality
all individuals: 1743
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2367
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6874
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.068143466388488e-5
allele num: 65186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.64e0

VQSLOD
type: SiteQuality
SIO_000300: -2.393e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.661e0

DP
type: SiteQuality
SIO_000300: 1.445734e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.09e-1

QD
type: SiteQuality
SIO_000300: 1.528e1

FS
type: SiteQuality
SIO_000300: 1.229e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

GenotypeQuality
all individuals: 1087
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2384
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 709
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1747
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -7.64e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.37e0

FS
type: SiteQuality
SIO_000300: 2.219e0

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

QD
type: SiteQuality
SIO_000300: 1.251e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

DP
type: SiteQuality
SIO_000300: 1.448665e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.55e-1

GenotypeQuality
all individuals: 680
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1747
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2745
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65296
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16198001394376e-4
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10214
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.448665e6

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.64e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.219e0

VQSLOD
type: SiteQuality
SIO_000300: 3.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

QD
type: SiteQuality
SIO_000300: 1.251e1

GenotypeQuality
all individuals: 58
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43167
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 711
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530502923260583e-5
allele num: 65338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.583e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 7.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

MQ
type: SiteQuality
SIO_000300: 5.37e1

DP
type: SiteQuality
SIO_000300: 1.449287e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0