5-179271202-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179271202
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179271201
    reference: chr 5
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.151delC
  hgvsp: ENSP00000431019.1:p.Gln51SerfsTer113
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520900
  gene symbol: C5orf45
  hgvsc: ENST00000520900.1:n.123delC
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.216-2139delC
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.127-2139delC
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*62delC
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*62delC
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.216-2139delC
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.240delC
  hgvsp: ENSP00000430298.1:p.Ser81ValfsTer14
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.240delC
  hgvsp: ENSP00000429651.1:p.Ser81ValfsTer?
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.366delC
  hgvsp: ENSP00000384599.2:p.Ser123ValfsTer14
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*139delC
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*230delC
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.240delC
  hgvsp: ENSP00000428460.1:p.Ser81ValfsTer14
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.240delC
  hgvsp: ENSP00000292586.6:p.Ser81ValfsTer14
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000523267
  gene symbol: C5orf45
  hgvsc: ENST00000523267.1:n.19delC
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.127-2139delC
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000521675
  gene symbol: C5orf45
  hgvsc: ENST00000521675.1:n.18delC
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.177-2139delC
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*38-2139delC
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*217delC
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser81ValfsTer14
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: TG
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

5-179271203-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179271203
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179271203
    reference: chr 5
allele count: 3
allele frequency: 2.471821237888076e-5
allele num: 121368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.216-2139C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.151C>T
  hgvsp: ENSP00000431019.1:p.Gln51Ter
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.366C>T
  hgvsp: ENST00000403396.2:c.366C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.240C>T
  hgvsp: ENST00000518235.1:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*217C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*62C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.177-2139C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*230C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000523267
  gene symbol: C5orf45
  hgvsc: ENST00000523267.1:n.19C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*38-2139C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.127-2139C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.240C>T
  hgvsp: ENST00000518219.1:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*139C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.240C>T
  hgvsp: ENST00000292586.6:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*62C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.216-2139C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.127-2139C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.240C>T
  hgvsp: ENST00000521333.1:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-163C>T
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gln51Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff

5-179271207-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179271207
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179271207
    reference: chr 5
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.236G>A
  hgvsp: ENSP00000428460.1:p.Ser79Asn
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*58G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*135G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*38-2143G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.362G>A
  hgvsp: ENSP00000384599.2:p.Ser121Asn
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.147G>A
  hgvsp: ENST00000523737.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*58G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-167G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.216-2143G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*213G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000521675
  gene symbol: C5orf45
  hgvsc: ENST00000521675.1:n.14G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000523267
  gene symbol: C5orf45
  hgvsc: ENST00000523267.1:n.15G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*226G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.236G>A
  hgvsp: ENSP00000292586.6:p.Ser79Asn
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.236G>A
  hgvsp: ENSP00000430298.1:p.Ser79Asn
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520900
  gene symbol: C5orf45
  hgvsc: ENST00000520900.1:n.119G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.127-2143G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.236G>A
  hgvsp: ENSP00000429651.1:p.Ser79Asn
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.177-2143G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.216-2143G>A
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser79Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

5-179271212-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179271212
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179271212
    reference: chr 5
allele count: 1
allele frequency: 8.239539904091756e-6
allele num: 121366
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.231T>C
  hgvsp: ENST00000521333.1:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.127-2148T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.231T>C
  hgvsp: ENST00000518219.1:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*38-2148T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.231T>C
  hgvsp: ENST00000518235.1:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.177-2148T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.142T>C
  hgvsp: ENSP00000431019.1:p.Cys48Arg
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520900
  gene symbol: C5orf45
  hgvsc: ENST00000520900.1:n.114T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*53T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000521675
  gene symbol: C5orf45
  hgvsc: ENST00000521675.1:n.9T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*221T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-172T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.357T>C
  hgvsp: ENST00000403396.2:c.357T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.231T>C
  hgvsp: ENST00000292586.6:c.231T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*130T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*208T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.127-2148T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.216-2148T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*53T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.216-2148T>C
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Cys48Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

5-179271234-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179271234
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179271234
    reference: chr 5
allele count: 2
allele frequency: 1.648641519388024e-5
allele num: 121312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*206-7C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.216-2170C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.216-7C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.216-7C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-7C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.216-7C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*38-7C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*38-7C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-7C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.342-7C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*38-2170C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520900
  gene symbol: C5orf45
  hgvsc: ENST00000520900.1:n.92C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.216-2170C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.216-7C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*115-7C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.127-2170C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.177-2170C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*193-7C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.127-2170C>T
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.216-7C>T
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

5-179271240-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179271240
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179271240
    reference: chr 5
allele count: 1
allele frequency: 8.246470510621453e-6
allele num: 121264
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.177-2176G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520900
  gene symbol: C5orf45
  hgvsc: ENST00000520900.1:n.86G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-13G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*206-13G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*38-13G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*38-13G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.216-13G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.216-13G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-13G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.216-13G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*38-2176G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.127-2176G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*115-13G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.216-13G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.216-2176G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.216-2176G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.127-2176G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*193-13G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.342-13G>A
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

5-179271244-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179271244
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179271244
    reference: chr 5
allele count: 3
allele frequency: 2.474104374216534e-5
allele num: 121256
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-17T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.342-17T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.216-2180T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.216-17T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.216-2180T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*193-17T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.177-2180T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.216-17T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.216-17T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*38-17T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520900
  gene symbol: C5orf45
  hgvsc: ENST00000520900.1:n.82T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*115-17T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.127-2180T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*38-17T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.127-2180T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*38-2180T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*206-17T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.216-17T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-17T>C
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

5-179271246-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179271246
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179271246
    reference: chr 5
allele count: 1
allele frequency: 8.248511143738554e-6
allele num: 121234
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.127-2182T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.216-19T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*38-19T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.127-2182T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.216-19T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.216-19T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*115-19T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-19T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520900
  gene symbol: C5orf45
  hgvsc: ENST00000520900.1:n.80T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.177-2182T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.342-19T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.216-19T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-19T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.216-2182T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*206-19T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*193-19T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*38-19T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.216-2182T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*38-2182T>C
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-179271248-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179271248
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179271248
    reference: chr 5
allele count: 1
allele frequency: 8.25000825000825e-6
allele num: 121212
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.216-21T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*38-21T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.342-21T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.216-2184T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-21T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520900
  gene symbol: C5orf45
  hgvsc: ENST00000520900.1:n.78T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.216-21T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*38-2184T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*193-21T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-21T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.216-2184T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.216-21T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*38-21T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*206-21T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.177-2184T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.127-2184T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*115-21T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.216-21T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.127-2184T>C
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3747
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

5-179271256-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179271256
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179271256
    reference: chr 5
allele count: 2
allele frequency: 1.650764303872693e-5
allele num: 121156
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*206-29A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.216-29A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.177-2192A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.216-29A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.216-2192A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*193-29A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.127-2192A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520900
  gene symbol: C5orf45
  hgvsc: ENST00000520900.1:n.70A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*115-29A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-29A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.216-29A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-29A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*38-29A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.216-29A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*38-2192A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.216-2192A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*38-29A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.127-2192A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.342-29A>C
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP

5-179271269-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179271269
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179271269
    reference: chr 5
allele count: 2
allele frequency: 1.653001851362074e-5
allele num: 120992
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.216-42C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.216-42C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520900
  gene symbol: C5orf45
  hgvsc: ENST00000520900.1:n.57C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*206-42C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*193-42C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.216-42C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*115-42C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.216-42C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*38-2205C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.127-2205C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-42C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.177-2205C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-42C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.127-2205C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.342-42C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.216-2205C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*38-42C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.216-2205C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*38-42C>G
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

5-179271272-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179271272
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179271272
    reference: chr 5
allele count: 4
allele frequency: 3.307479865716317e-5
allele num: 120938
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*38-2208C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.216-2208C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.216-45C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.216-45C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.216-2208C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.127-2208C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.177-2208C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.216-45C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-45C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.127-2208C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.216-45C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520900
  gene symbol: C5orf45
  hgvsc: ENST00000520900.1:n.54C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*38-45C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*38-45C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*206-45C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*115-45C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*193-45C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-45C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.342-45C>T
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

5-179274927-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274927
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274927
    reference: chr 5
allele count: 1
allele frequency: 8.756260726419389e-6
allele num: 114204
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*114+51C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.215+51C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*37+51C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.215+51C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*192+51C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*37+51C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5451C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.215+51C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.215+51C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.215+51C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*205+51C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5451C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5451C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*37+51C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3700C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.278C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.215+51C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.341+51C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3700C>T
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

5-179274934-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274934
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274934
    reference: chr 5
allele count: 2
allele frequency: 1.751252145283878e-5
allele num: 114204
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*205+44G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3707G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.215+44G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.215+44G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5444G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.215+44G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5444G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.215+44G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.271G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*37+44G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5444G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*37+44G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.215+44G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.215+44G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*37+44G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.341+44G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*192+44G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*114+44G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3707G>A
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8651
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

5-179274935-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274935
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274935
    reference: chr 5
allele count: 82
allele frequency: 7.169837716843872e-4
allele num: 114368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5443C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*192+43C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.215+43C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.215+43C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.215+43C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5443C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*37+43C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.215+43C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.215+43C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.341+43C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5443C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.215+43C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*37+43C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.270C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*37+43C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3708C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*114+43C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3708C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*205+43C>T
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 2
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

http://identifiers.org/exac.variant/5-179274936-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274936
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274936
    reference: chr 5
allele count: 1
allele frequency: 8.738508860847985e-6
allele num: 114436
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3709T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3709T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5442T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.215+42T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*192+42T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*37+42T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.215+42T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*205+42T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.215+42T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.215+42T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.215+42T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*37+42T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5442T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.269T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.341+42T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.215+42T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*37+42T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*114+42T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5442T>G
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2941
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

5-179274944-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274944
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274944
    reference: chr 5
allele count: 1
allele frequency: 8.711863816144826e-6
allele num: 114786
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.341+34C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.215+34C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*205+34C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*114+34C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3717C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.215+34C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*37+34C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5434C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5434C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.215+34C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.261C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*192+34C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3717C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.215+34C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*37+34C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.215+34C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*37+34C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5434C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.215+34C>T
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

5-179274944-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274944
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274943
    reference: chr 5
allele count: 1
allele frequency: 8.711863816144826e-6
allele num: 114786
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*37+33delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3718delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.260delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.215+33delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5433delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5433delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*37+33delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*205+33delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3718delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.215+33delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.341+33delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.215+33delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5433delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*37+33delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.215+33delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*114+33delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.215+33delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.215+33delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*192+33delG
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
reference allele: GC
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

5-179274948-GAC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274948
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274946
    reference: chr 5
allele count: 8
allele frequency: 6.949632538179544e-5
allele num: 115114
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5428_126+5429delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*37+28_*37+29delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.215+28_215+29delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5428_126+5429delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5428_176+5429delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.215+28_215+29delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*205+28_*205+29delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.215+28_215+29delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.255_256delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*37+28_*37+29delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.215+28_215+29delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.341+28_341+29delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*37+28_*37+29delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*192+28_*192+29delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*114+28_*114+29delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3723_127-3722delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.215+28_215+29delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.215+28_215+29delGT
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3723_-187-3722delGT
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2882
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: GAC
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/5-179274950-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274950
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274950
    reference: chr 5
allele count: 1
allele frequency: 8.684777322309456e-6
allele num: 115144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.215+28G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.215+28G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.215+28G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*37+28G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5428G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3723G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*205+28G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5428G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.341+28G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.255G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*37+28G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5428G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*37+28G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*192+28G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3723G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*114+28G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.215+28G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.215+28G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.215+28G>T
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

5-179274956-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274956
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274956
    reference: chr 5
allele count: 4
allele frequency: 3.453992815694943e-5
allele num: 115808
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*37+22G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.215+22G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*37+22G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.249G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5422G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.215+22G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5422G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.215+22G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3729G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.215+22G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.215+22G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.215+22G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*192+22G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*205+22G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*114+22G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*37+22G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5422G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.341+22G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3729G>A
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

5-179274957-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274957
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274957
    reference: chr 5
allele count: 2
allele frequency: 1.722534192303717e-5
allele num: 116108
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.215+21C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5421C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*37+21C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.215+21C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.215+21C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*205+21C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.215+21C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*192+21C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5421C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*37+21C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.215+21C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3730C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.248C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3730C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*37+21C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.341+21C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*114+21C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.215+21C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5421C>T
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

5-179274959-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274959
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274959
    reference: chr 5
allele count: 2
allele frequency: 1.716414067729699e-5
allele num: 116522
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5419A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*192+19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3732A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*37+19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5419A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.215+19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.215+19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5419A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*37+19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.246A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.215+19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*37+19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.215+19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.341+19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3732A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.215+19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.215+19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*205+19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*114+19A>G
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-179274963-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274963
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274963
    reference: chr 5
allele count: 6
allele frequency: 5.12952038984355e-5
allele num: 116970
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.215+15G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.242G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.215+15G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5415G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*37+15G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*205+15G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3736G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*37+15G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5415G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5415G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*37+15G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*192+15G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.215+15G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.215+15G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.215+15G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.341+15G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.215+15G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*114+15G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3736G>T
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum

5-179274974-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274974
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274974
    reference: chr 5
allele count: 1
allele frequency: 8.448229251148959e-6
allele num: 118368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3747C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*37+4C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.215+4C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*192+4C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.215+4C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.215+4C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*205+4C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.215+4C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5404C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*114+4C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3747C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*37+4C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.215+4C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.341+4C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5404C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.231C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*37+4C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5404C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.215+4C>T
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.215+4C>T
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
reference allele: G
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

5-179274983-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274983
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274983
    reference: chr 5
allele count: 1
allele frequency: 8.36988181726874e-6
allele num: 119476
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.336A>G
  hgvsp: ENST00000403396.2:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5395A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3756A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.210A>G
  hgvsp: ENST00000518219.1:c.210A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*32A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.210A>G
  hgvsp: ENST00000518235.1:c.210A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*32A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5395A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*200A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.210A>G
  hgvsp: ENST00000521333.1:c.210A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.210A>G
  hgvsp: ENST00000521299.1:c.210A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*32A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.210A>G
  hgvsp: ENST00000519208.1:c.210A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3756A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5395A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.210A>G
  hgvsp: ENST00000292586.6:c.210A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*187A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*109A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.222A>G
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro70Pro
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

5-179274985-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274985
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274985
    reference: chr 5
allele count: 1
allele frequency: 8.360365180751095e-6
allele num: 119612
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.334C>T
  hgvsp: ENSP00000384599.2:p.Pro112Ser
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5393C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.208C>T
  hgvsp: ENSP00000430298.1:p.Pro70Ser
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.220C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*107C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*30C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5393C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*30C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.208C>T
  hgvsp: ENSP00000292586.6:p.Pro70Ser
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.208C>T
  hgvsp: ENSP00000429563.1:p.Pro70Ser
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.208C>T
  hgvsp: ENSP00000429651.1:p.Pro70Ser
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3758C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*198C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*30C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.208C>T
  hgvsp: ENSP00000428460.1:p.Pro70Ser
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.208C>T
  hgvsp: ENSP00000430814.1:p.Pro70Ser
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5393C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3758C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*185C>T
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro70Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum

5-179274985-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274985
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274984
    reference: chr 5
allele count: 1
allele frequency: 8.360365180751095e-6
allele num: 119612
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.207delG
  hgvsp: ENSP00000429651.1:p.Pro70HisfsTer5
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.207delG
  hgvsp: ENSP00000429563.1:p.Pro70HisfsTer53
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.207delG
  hgvsp: ENSP00000430298.1:p.Pro70HisfsTer5
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.207delG
  hgvsp: ENSP00000292586.6:p.Pro70HisfsTer5
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5392delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.333delG
  hgvsp: ENSP00000384599.2:p.Pro112HisfsTer5
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*106delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*184delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.207delG
  hgvsp: ENSP00000428460.1:p.Pro70HisfsTer5
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*29delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3759delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*197delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5392delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.207delG
  hgvsp: ENSP00000430814.1:p.Pro70HisfsTer53
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.219delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5392delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*29delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3759delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*29delG
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Pro70HisfsTer5
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: GC
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

5-179274989-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274989
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274989
    reference: chr 5
allele count: 61
allele frequency: 5.097691831993448e-4
allele num: 119662
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.204G>C
  hgvsp: ENSP00000292586.6:p.Glu68Asp
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.204G>C
  hgvsp: ENSP00000430814.1:p.Glu68Asp
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*26G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*26G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*103G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.204G>C
  hgvsp: ENSP00000430298.1:p.Glu68Asp
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5389G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*26G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.216G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*181G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.330G>C
  hgvsp: ENSP00000384599.2:p.Glu110Asp
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.204G>C
  hgvsp: ENSP00000429651.1:p.Glu68Asp
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*194G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3762G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5389G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5389G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3762G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.204G>C
  hgvsp: ENSP00000428460.1:p.Glu68Asp
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.204G>C
  hgvsp: ENSP00000429563.1:p.Glu68Asp
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Glu68Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

5-179274993-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274993
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274993
    reference: chr 5
allele count: 3
allele frequency: 2.492646692257839e-5
allele num: 120354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*22C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.200C>T
  hgvsp: ENSP00000428460.1:p.Ser67Leu
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*99C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.200C>T
  hgvsp: ENSP00000430814.1:p.Ser67Leu
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5385C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.200C>T
  hgvsp: ENSP00000429563.1:p.Ser67Leu
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5385C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.200C>T
  hgvsp: ENSP00000292586.6:p.Ser67Leu
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.326C>T
  hgvsp: ENSP00000384599.2:p.Ser109Leu
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*190C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.200C>T
  hgvsp: ENSP00000429651.1:p.Ser67Leu
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.200C>T
  hgvsp: ENSP00000430298.1:p.Ser67Leu
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3766C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3766C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*22C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*177C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*22C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.212C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5385C>T
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser67Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-179274997-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179274997
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179274997
    reference: chr 5
allele count: 2
allele frequency: 1.659200265472042e-5
allele num: 120540
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3770G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.196G>T
  hgvsp: ENSP00000429651.1:p.Val66Phe
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.196G>T
  hgvsp: ENSP00000292586.6:p.Val66Phe
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*186G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5381G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5381G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.196G>T
  hgvsp: ENSP00000429563.1:p.Val66Phe
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*173G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.196G>T
  hgvsp: ENSP00000428460.1:p.Val66Phe
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.208G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.196G>T
  hgvsp: ENSP00000430298.1:p.Val66Phe
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.322G>T
  hgvsp: ENSP00000384599.2:p.Val108Phe
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.196G>T
  hgvsp: ENSP00000430814.1:p.Val66Phe
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*18G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*18G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*18G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*95G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5381G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3770G>T
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Val66Phe
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

5-179275006-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275006
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275006
    reference: chr 5
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.187C>T
  hgvsp: ENSP00000428460.1:p.Gln63Ter
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.187C>T
  hgvsp: ENSP00000429563.1:p.Gln63Ter
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.313C>T
  hgvsp: ENSP00000384599.2:p.Gln105Ter
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*177C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*9C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.187C>T
  hgvsp: ENSP00000430298.1:p.Gln63Ter
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*86C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*9C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*164C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.187C>T
  hgvsp: ENSP00000292586.6:p.Gln63Ter
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3779C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.187C>T
  hgvsp: ENSP00000429651.1:p.Gln63Ter
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5372C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5372C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3779C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5372C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.199C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*9C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.187C>T
  hgvsp: ENSP00000430814.1:p.Gln63Ter
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gln63Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

5-179275007-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275007
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275007
    reference: chr 5
allele count: 1
allele frequency: 8.263506701703935e-6
allele num: 121014
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.312A>T
  hgvsp: ENST00000403396.2:c.312A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.186A>T
  hgvsp: ENST00000518219.1:c.186A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.186A>T
  hgvsp: ENST00000518235.1:c.186A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.*8A>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.*8A>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.186A>T
  hgvsp: ENST00000521333.1:c.186A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.198A>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.186A>T
  hgvsp: ENST00000292586.6:c.186A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5371A>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5371A>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.186A>T
  hgvsp: ENST00000521299.1:c.186A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5371A>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*176A>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.*8A>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.186A>T
  hgvsp: ENST00000519208.1:c.186A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*85A>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3780A>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3780A>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*163A>T
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Leu62Leu
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

5-179275016-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275016
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275016
    reference: chr 5
allele count: 2
allele frequency: 1.649756660892518e-5
allele num: 121230
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.177A>G
  hgvsp: ENST00000518235.1:c.177A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.177A>G
  hgvsp: ENST00000521333.1:c.177A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.257A>G
  hgvsp: ENST00000522663.1:c.257A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*154A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3789A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.257A>G
  hgvsp: ENST00000520995.1:c.257A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5362A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: stop_retained_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.272A>G
  hgvsp: ENST00000524068.1:c.272A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.189A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.177A>G
  hgvsp: ENST00000518219.1:c.177A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.177A>G
  hgvsp: ENST00000519208.1:c.177A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3789A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.177A>G
  hgvsp: ENST00000521299.1:c.177A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.177A>G
  hgvsp: ENST00000292586.6:c.177A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*167A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*76A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5362A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5362A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.303A>G
  hgvsp: ENST00000403396.2:c.303A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: stop retained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ter91Ter
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

5-179275019-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275019
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275019
    reference: chr 5
allele count: 1
allele frequency: 8.24715060946443e-6
allele num: 121254
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3792G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5359G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.174G>C
  hgvsp: ENSP00000430814.1:p.Lys58Asn
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.269G>C
  hgvsp: ENSP00000430766.1:p.Ser90Thr
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*151G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.174G>C
  hgvsp: ENSP00000292586.6:p.Lys58Asn
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.300G>C
  hgvsp: ENSP00000384599.2:p.Lys100Asn
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5359G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5359G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.254G>C
  hgvsp: ENSP00000429047.1:p.Ser85Thr
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.174G>C
  hgvsp: ENSP00000429651.1:p.Lys58Asn
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.174G>C
  hgvsp: ENSP00000428460.1:p.Lys58Asn
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3792G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*164G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.186G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.254G>C
  hgvsp: ENSP00000429835.1:p.Ser85Thr
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.174G>C
  hgvsp: ENSP00000430298.1:p.Lys58Asn
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*73G>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.174G>C
  hgvsp: ENSP00000429563.1:p.Lys58Asn
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Lys58Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

5-179275021-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275021
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275021
    reference: chr 5
allele count: 1
allele frequency: 8.245382585751979e-6
allele num: 121280
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3794A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.298A>C
  hgvsp: ENSP00000384599.2:p.Lys100Gln
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5357A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5357A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.172A>C
  hgvsp: ENSP00000430814.1:p.Lys58Gln
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.172A>C
  hgvsp: ENSP00000428460.1:p.Lys58Gln
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.172A>C
  hgvsp: ENSP00000430298.1:p.Lys58Gln
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*149A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3794A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.252A>C
  hgvsp: ENSP00000429835.1:p.Lys84Asn
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.252A>C
  hgvsp: ENSP00000429047.1:p.Lys84Asn
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*71A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.172A>C
  hgvsp: ENSP00000429563.1:p.Lys58Gln
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.172A>C
  hgvsp: ENSP00000429651.1:p.Lys58Gln
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.172A>C
  hgvsp: ENSP00000292586.6:p.Lys58Gln
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.267A>C
  hgvsp: ENSP00000430766.1:p.Lys89Asn
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*162A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5357A>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.184A>C
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Lys58Gln
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: T
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-179275028-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275028
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275028
    reference: chr 5
allele count: 3
allele frequency: 2.47239162683369e-5
allele num: 121340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5350T>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.165T>A
  hgvsp: ENSP00000429563.1:p.His55Gln
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.165T>A
  hgvsp: ENSP00000428460.1:p.His55Gln
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3801T>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.260T>A
  hgvsp: ENSP00000430766.1:p.Met87Lys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.245T>A
  hgvsp: ENSP00000429047.1:p.Met82Lys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.165T>A
  hgvsp: ENSP00000429651.1:p.His55Gln
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3801T>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.245T>A
  hgvsp: ENSP00000429835.1:p.Met82Lys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.165T>A
  hgvsp: ENSP00000430298.1:p.His55Gln
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5350T>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*64T>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*142T>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.177T>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*155T>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.291T>A
  hgvsp: ENSP00000384599.2:p.His97Gln
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5350T>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.165T>A
  hgvsp: ENSP00000430814.1:p.His55Gln
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.165T>A
  hgvsp: ENSP00000292586.6:p.His55Gln
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.His55Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

5-179275029-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275029
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275029
    reference: chr 5
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.244A>G
  hgvsp: ENSP00000429047.1:p.Met82Val
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.164A>G
  hgvsp: ENSP00000430814.1:p.His55Arg
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.244A>G
  hgvsp: ENSP00000429835.1:p.Met82Val
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3802A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.164A>G
  hgvsp: ENSP00000428460.1:p.His55Arg
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*154A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*63A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*141A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.164A>G
  hgvsp: ENSP00000429651.1:p.His55Arg
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.164A>G
  hgvsp: ENSP00000292586.6:p.His55Arg
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.164A>G
  hgvsp: ENSP00000429563.1:p.His55Arg
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.164A>G
  hgvsp: ENSP00000430298.1:p.His55Arg
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5349A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.176A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3802A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5349A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5349A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.290A>G
  hgvsp: ENSP00000384599.2:p.His97Arg
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.259A>G
  hgvsp: ENSP00000430766.1:p.Met87Val
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.His55Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

5-179275032-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275032
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275032
    reference: chr 5
allele count: 12
allele frequency: 9.888914526815439e-5
allele num: 121348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*138G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.241G>A
  hgvsp: ENSP00000429047.1:p.Ala81Thr
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.161G>A
  hgvsp: ENSP00000430298.1:p.Arg54His
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.241G>A
  hgvsp: ENSP00000429835.1:p.Ala81Thr
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5346G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.161G>A
  hgvsp: ENSP00000429563.1:p.Arg54His
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.173G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3805G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.161G>A
  hgvsp: ENSP00000292586.6:p.Arg54His
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5346G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*151G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5346G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.161G>A
  hgvsp: ENSP00000429651.1:p.Arg54His
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.287G>A
  hgvsp: ENSP00000384599.2:p.Arg96His
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.161G>A
  hgvsp: ENSP00000428460.1:p.Arg54His
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3805G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*60G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.256G>A
  hgvsp: ENSP00000430766.1:p.Ala86Thr
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.161G>A
  hgvsp: ENSP00000430814.1:p.Arg54His
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg54His
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum

5-179275033-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275033
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275033
    reference: chr 5
allele count: 4
allele frequency: 3.29614186594591e-5
allele num: 121354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.160C>T
  hgvsp: ENSP00000430298.1:p.Arg54Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*137C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.160C>T
  hgvsp: ENSP00000430814.1:p.Arg54Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.160C>T
  hgvsp: ENSP00000429651.1:p.Arg54Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.160C>T
  hgvsp: ENSP00000292586.6:p.Arg54Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.240C>T
  hgvsp: ENST00000520995.1:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.240C>T
  hgvsp: ENST00000522663.1:c.240C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3806C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*150C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.286C>T
  hgvsp: ENSP00000384599.2:p.Arg96Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5345C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.160C>T
  hgvsp: ENSP00000428460.1:p.Arg54Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.160C>T
  hgvsp: ENSP00000429563.1:p.Arg54Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3806C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.172C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5345C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*59C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.255C>T
  hgvsp: ENST00000524068.1:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5345C>T
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg54Cys
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-179275035-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275035
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275035
    reference: chr 5
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.158G>T
  hgvsp: ENSP00000428460.1:p.Arg53Ile
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*57G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*148G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.158G>T
  hgvsp: ENSP00000292586.6:p.Arg53Ile
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.238G>T
  hgvsp: ENSP00000429835.1:p.Asp80Tyr
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5343G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3808G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*135G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.158G>T
  hgvsp: ENSP00000429651.1:p.Arg53Ile
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5343G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3808G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.158G>T
  hgvsp: ENSP00000429563.1:p.Arg53Ile
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.238G>T
  hgvsp: ENSP00000429047.1:p.Asp80Tyr
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.158G>T
  hgvsp: ENSP00000430298.1:p.Arg53Ile
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.158G>T
  hgvsp: ENSP00000430814.1:p.Arg53Ile
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5343G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.284G>T
  hgvsp: ENSP00000384599.2:p.Arg95Ile
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.170G>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.253G>T
  hgvsp: ENSP00000430766.1:p.Asp85Tyr
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg53Ile
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

5-179275037-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275037
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275037
    reference: chr 5
allele count: 3
allele frequency: 2.471821237888076e-5
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.156T>C
  hgvsp: ENST00000521333.1:c.156T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*133T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.236T>C
  hgvsp: ENSP00000429835.1:p.Val79Ala
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.156T>C
  hgvsp: ENST00000519208.1:c.156T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.236T>C
  hgvsp: ENSP00000429047.1:p.Val79Ala
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.251T>C
  hgvsp: ENSP00000430766.1:p.Val84Ala
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.156T>C
  hgvsp: ENST00000292586.6:c.156T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5341T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3810T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.156T>C
  hgvsp: ENST00000518235.1:c.156T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.168T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*146T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.282T>C
  hgvsp: ENST00000403396.2:c.282T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3810T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5341T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.156T>C
  hgvsp: ENST00000521299.1:c.156T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.156T>C
  hgvsp: ENST00000518219.1:c.156T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5341T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*55T>C
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Val84Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

5-179275040-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275040
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275040
    reference: chr 5
allele count: 15
allele frequency: 1.235869887618231e-4
allele num: 121372
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.279T>C
  hgvsp: ENST00000403396.2:c.279T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.153T>C
  hgvsp: ENST00000518235.1:c.153T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5338T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.153T>C
  hgvsp: ENST00000519208.1:c.153T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.233T>C
  hgvsp: ENSP00000429835.1:p.Ile78Thr
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.248T>C
  hgvsp: ENSP00000430766.1:p.Ile83Thr
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.153T>C
  hgvsp: ENST00000292586.6:c.153T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5338T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.233T>C
  hgvsp: ENSP00000429047.1:p.Ile78Thr
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.153T>C
  hgvsp: ENST00000521299.1:c.153T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*52T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*130T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.153T>C
  hgvsp: ENST00000521333.1:c.153T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5338T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.153T>C
  hgvsp: ENST00000518219.1:c.153T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*143T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3813T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.165T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3813T>C
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ile83Thr
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

5-179275050-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275050
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275050
    reference: chr 5
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.143C>G
  hgvsp: ENSP00000430814.1:p.Ser48Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.238C>G
  hgvsp: ENSP00000430766.1:p.Leu80Val
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.223C>G
  hgvsp: ENSP00000429835.1:p.Leu75Val
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.143C>G
  hgvsp: ENSP00000428460.1:p.Ser48Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.223C>G
  hgvsp: ENSP00000429047.1:p.Leu75Val
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.155C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.143C>G
  hgvsp: ENSP00000429651.1:p.Ser48Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.143C>G
  hgvsp: ENSP00000292586.6:p.Ser48Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3823C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5328C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.143C>G
  hgvsp: ENSP00000430298.1:p.Ser48Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*42C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5328C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.269C>G
  hgvsp: ENSP00000384599.2:p.Ser90Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*120C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.143C>G
  hgvsp: ENSP00000429563.1:p.Ser48Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3823C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5328C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*133C>G
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser48Cys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/5-179275051-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275051
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275051
    reference: chr 5
allele count: 73
allele frequency: 6.013873099039428e-4
allele num: 121386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5327T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*132T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.222T>G
  hgvsp: ENST00000522663.1:c.222T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.237T>G
  hgvsp: ENST00000524068.1:c.237T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.142T>G
  hgvsp: ENSP00000292586.6:p.Ser48Ala
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.142T>G
  hgvsp: ENSP00000428460.1:p.Ser48Ala
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.142T>G
  hgvsp: ENSP00000429651.1:p.Ser48Ala
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.142T>G
  hgvsp: ENSP00000430298.1:p.Ser48Ala
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5327T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.222T>G
  hgvsp: ENST00000520995.1:c.222T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.142T>G
  hgvsp: ENSP00000430814.1:p.Ser48Ala
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*41T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.154T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.268T>G
  hgvsp: ENSP00000384599.2:p.Ser90Ala
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5327T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3824T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*119T>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.142T>G
  hgvsp: ENSP00000429563.1:p.Ser48Ala
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3824T>G
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ser48Ala
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS

5-179275052-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275052
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275052
    reference: chr 5
allele count: 3
allele frequency: 2.47137325974133e-5
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.141C>T
  hgvsp: ENST00000518219.1:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3825C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3825C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*118C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5326C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.221C>T
  hgvsp: ENSP00000429835.1:p.Ala74Val
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.267C>T
  hgvsp: ENST00000403396.2:c.267C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*40C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.221C>T
  hgvsp: ENSP00000429047.1:p.Ala74Val
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.141C>T
  hgvsp: ENST00000521333.1:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.236C>T
  hgvsp: ENSP00000430766.1:p.Ala79Val
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.141C>T
  hgvsp: ENST00000518235.1:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.141C>T
  hgvsp: ENST00000292586.6:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*131C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.153C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5326C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.141C>T
  hgvsp: ENST00000521299.1:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.141C>T
  hgvsp: ENST00000519208.1:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5326C>T
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala79Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-179275055-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275055
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275055
    reference: chr 5
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5323A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.138A>G
  hgvsp: ENST00000518219.1:c.138A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.138A>G
  hgvsp: ENST00000292586.6:c.138A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.138A>G
  hgvsp: ENST00000518235.1:c.138A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.138A>G
  hgvsp: ENST00000519208.1:c.138A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.138A>G
  hgvsp: ENST00000521333.1:c.138A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.138A>G
  hgvsp: ENST00000521299.1:c.138A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.233A>G
  hgvsp: ENSP00000430766.1:p.Lys78Arg
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*128A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3828A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*37A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.218A>G
  hgvsp: ENSP00000429047.1:p.Lys73Arg
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3828A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.218A>G
  hgvsp: ENSP00000429835.1:p.Lys73Arg
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5323A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.264A>G
  hgvsp: ENST00000403396.2:c.264A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.150A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5323A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*115A>G
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Lys78Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

5-179275062-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275062
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275062
    reference: chr 5
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5316A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.131A>G
  hgvsp: ENSP00000428460.1:p.Tyr44Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.131A>G
  hgvsp: ENSP00000429563.1:p.Tyr44Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.131A>G
  hgvsp: ENSP00000292586.6:p.Tyr44Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.131A>G
  hgvsp: ENSP00000430814.1:p.Tyr44Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.131A>G
  hgvsp: ENSP00000430298.1:p.Tyr44Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.211A>G
  hgvsp: ENSP00000429047.1:p.Met71Val
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.211A>G
  hgvsp: ENSP00000429835.1:p.Met71Val
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*30A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.226A>G
  hgvsp: ENSP00000430766.1:p.Met76Val
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3835A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.131A>G
  hgvsp: ENSP00000429651.1:p.Tyr44Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3835A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.257A>G
  hgvsp: ENSP00000384599.2:p.Tyr86Cys
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.143A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5316A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5316A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*108A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*121A>G
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Tyr44Cys
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP

5-179275065-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275065
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275064
    reference: chr 5
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3839delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.222delG
  hgvsp: ENSP00000430766.1:p.Arg74SerfsTer4
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*26delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.127delG
  hgvsp: ENSP00000430298.1:p.Ala43LeufsTer17
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.207delG
  hgvsp: ENSP00000429047.1:p.Arg69SerfsTer4
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*117delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.127delG
  hgvsp: ENSP00000292586.6:p.Ala43LeufsTer17
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*104delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3839delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.139delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.253delG
  hgvsp: ENSP00000384599.2:p.Ala85LeufsTer17
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.127delG
  hgvsp: ENSP00000429651.1:p.Ala43LeufsTer17
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.207delG
  hgvsp: ENSP00000429835.1:p.Arg69SerfsTer4
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.127delG
  hgvsp: ENSP00000428460.1:p.Ala43LeufsTer17
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5312delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.127delG
  hgvsp: ENSP00000429563.1:p.Ala43LeufsTer17
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5312delG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5312delG
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala43LeufsTer17
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: African
reference allele: GC
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

5-179275084-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275084
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275084
    reference: chr 5
allele count: 2
allele frequency: 1.649620587264929e-5
allele num: 121240
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.127-18T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.207-18T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.127-18T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*104-18T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.139-18T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.127-18T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.207-18T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.127-18T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5294T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*26-18T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5294T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*117-18T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3857T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5294T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.127-18T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.127-18T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3857T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.253-18T>C
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.222-18T>C
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

5-179275085-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275085
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275085
    reference: chr 5
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5293A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3858A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.127-19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.127-19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.127-19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*104-19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5293A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.127-19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*26-19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*117-19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.253-19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3858A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.207-19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.127-19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5293A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.139-19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.222-19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.207-19A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.127-19A>G
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5968
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ

5-179275092-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275092
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275092
    reference: chr 5
allele count: 1198
allele frequency: 9.889874023808344e-3
allele num: 121134
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.127-26A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*26-26A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.127-26A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5286A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.127-26A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.207-26A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.207-26A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.222-26A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.253-26A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.127-26A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3865A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.127-26A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*117-26A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*104-26A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.139-26A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3865A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.127-26A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5286A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5286A>G
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 6.75e1
  variant carriers: 103
genotype quality: GenotypeQuality
num of homozygotes: 12
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum

5-179275093-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275093
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275093
    reference: chr 5
allele count: 4
allele frequency: 3.302455375571737e-5
allele num: 121122
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.207-27A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.139-27A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5285A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5285A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.207-27A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.127-27A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*26-27A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*104-27A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.253-27A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.127-27A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.127-27A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.222-27A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.127-27A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*117-27A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.127-27A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.127-27A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3866A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3866A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5285A>G
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6380
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum

5-179275105-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275105
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275105
    reference: chr 5
allele count: 2
allele frequency: 1.653849334325643e-5
allele num: 120930
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.207-39C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.222-39C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.127-39C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.127-39C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.127-39C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*117-39C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.139-39C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*104-39C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3878C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3878C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5273C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.127-39C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.127-39C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.207-39C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5273C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5273C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*26-39C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.253-39C>T
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.127-39C>T
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12426
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

5-179275105-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275105
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275105
    reference: chr 5
allele count: 1
allele frequency: 8.269246671628215e-6
allele num: 120930
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5273C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.127-39C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.127-39C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3878C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.139-39C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.127-39C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*104-39C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*117-39C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5273C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.207-39C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.127-39C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.222-39C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*26-39C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.127-39C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.207-39C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5273C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.127-39C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.253-39C>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3878C>G
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6307
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

5-179275107-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179275107
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179275107
    reference: chr 5
allele count: 1
allele frequency: 8.273899157717065e-6
allele num: 120862
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.139-41G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.222-41G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*26-41G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.127-41G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.127-41G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.127-41G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.127-3880G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.127-41G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.127-41G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+5271G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*117-41G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.207-41G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.253-41G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-187-3880G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.127-41G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+5271G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.207-41G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*104-41G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+5271G>A
  variant of: http://identifiers.org/hgnc/30817
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
reference allele: C
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

5-179278196-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179278196
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179278196
    reference: chr 5
allele count: 4
allele frequency: 3.71540033438603e-4
allele num: 10766
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.221+47A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.126+2182A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000517338
  gene symbol: C5orf45
  hgvsc: ENST00000517338.1:n.445A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.252+2001A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.126+2182A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.206+2001A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+2182A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.206+2001A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.126+2182A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*25+2001A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+2182A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.126+2182A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.138+2182A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-188+2182A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*116+47A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*103+47A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.126+2182A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.126+2182A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+2182A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.126+2182A>G
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ

5-179278202-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179278202
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179278202
    reference: chr 5
allele count: 60
allele frequency: 5.573100501579045e-3
allele num: 10766
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.126+2176A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+2176A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.206+1995A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.126+2176A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.126+2176A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.126+2176A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.126+2176A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.126+2176A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+2176A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000517338
  gene symbol: C5orf45
  hgvsc: ENST00000517338.1:n.439A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+2176A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.138+2176A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.206+1995A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*116+41A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-188+2176A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*25+1995A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.252+1995A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.126+2176A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*103+41A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.221+41A>G
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 5
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

5-179278242-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179278242
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179278242
    reference: chr 5
allele count: 1
allele frequency: 9.28332714444857e-5
allele num: 10772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.252+1955G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000517338
  gene symbol: C5orf45
  hgvsc: ENST00000517338.1:n.399G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.126+2136G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.126+2136G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.126+2136G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*116+1G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.126+2136G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.126+2136G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.138+2136G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.221+1G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+2136G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.206+1955G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*103+1G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.126+2136G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*25+1955G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+2136G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.126+2136G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-188+2136G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+2136G>A
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.206+1955G>A
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.*116+1G>A
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

5-179278257-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179278257
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179278255
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 10768
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.126+2119_126+2120delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-188+2119_-188+2120delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.126+2119_126+2120delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.206+1938_206+1939delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+2119_126+2120delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000517338
  gene symbol: C5orf45
  hgvsc: ENST00000517338.1:n.382_383delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*87_*88delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*100_*101delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.205_206delAG
  hgvsp: ENSP00000430766.1:p.Arg69GlyfsTer?
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.126+2119_126+2120delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.126+2119_126+2120delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*25+1938_*25+1939delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.126+2119_126+2120delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+2119_126+2120delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.126+2119_126+2120delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.206+1938_206+1939delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.126+2119_126+2120delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+2119_176+2120delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.252+1938_252+1939delAG
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.138+2119_138+2120delAG
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: frameshift
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg69GlyfsTer?
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: CCT
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

5-179278264-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 179278264
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 179278264
    reference: chr 5
allele count: 1
allele frequency: 9.286775631500742e-5
allele num: 10768
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429651
  ensembl transcript: ENST00000521333
  gene symbol: C5orf45
  hgvsc: ENST00000521333.1:c.126+2114A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000384599
  ensembl transcript: ENST00000403396
  gene symbol: C5orf45
  hgvsc: ENST00000403396.2:c.252+1933A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429107
  ensembl transcript: ENST00000523084
  gene symbol: C5orf45
  hgvsc: ENST00000523084.1:c.-188+2114A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430187
  ensembl transcript: ENST00000519213
  gene symbol: C5orf45
  hgvsc: ENST00000519213.1:c.*82A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429427
  ensembl transcript: ENST00000523835
  gene symbol: C5orf45
  hgvsc: ENST00000523835.1:c.*95A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000431019
  ensembl transcript: ENST00000523737
  gene symbol: C5orf45
  hgvsc: ENST00000523737.1:c.126+2114A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429047
  ensembl transcript: ENST00000520995
  gene symbol: C5orf45
  hgvsc: ENST00000520995.1:c.206+1933A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000292586
  ensembl transcript: ENST00000292586
  gene symbol: C5orf45
  hgvsc: ENST00000292586.6:c.126+2114A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430814
  ensembl transcript: ENST00000519208
  gene symbol: C5orf45
  hgvsc: ENST00000519208.1:c.126+2114A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000366130
  ensembl transcript: ENST00000376931
  gene symbol: C5orf45
  hgvsc: ENST00000376931.2:c.126+2114A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430766
  ensembl transcript: ENST00000524068
  gene symbol: C5orf45
  hgvsc: ENST00000524068.1:c.200A>G
  hgvsp: ENSP00000430766.1:p.Glu67Gly
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000517338
  gene symbol: C5orf45
  hgvsc: ENST00000517338.1:n.377A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429835
  ensembl transcript: ENST00000522663
  gene symbol: C5orf45
  hgvsc: ENST00000522663.1:c.206+1933A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000429563
  ensembl transcript: ENST00000521299
  gene symbol: C5orf45
  hgvsc: ENST00000521299.1:c.126+2114A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000519318
  gene symbol: C5orf45
  hgvsc: ENST00000519318.1:n.138+2114A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl transcript: ENST00000520150
  gene symbol: C5orf45
  hgvsc: ENST00000520150.1:n.176+2114A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428081
  ensembl transcript: ENST00000522157
  gene symbol: C5orf45
  hgvsc: ENST00000522157.1:c.*25+1933A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000427849
  ensembl transcript: ENST00000520698
  gene symbol: C5orf45
  hgvsc: ENST00000520698.1:c.126+2114A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000428460
  ensembl transcript: ENST00000518219
  gene symbol: C5orf45
  hgvsc: ENST00000518219.1:c.126+2114A>G
  variant of: http://identifiers.org/hgnc/30817
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161010
  ensembl protein: ENSP00000430298
  ensembl transcript: ENST00000518235
  gene symbol: C5orf45
  hgvsc: ENST00000518235.1:c.126+2114A>G
  variant of: http://identifiers.org/hgnc/30817
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Glu67Gly
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: T

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000161010
ensembl protein: ENSP00000429107
ensembl transcript: ENST00000523084
gene symbol: C5orf45
hgvsc: ENST00000523084.1:c.-163delC
variant of: http://identifiers.org/hgnc/30817

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 12638
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7725
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10284
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4280
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5224
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 458
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 444
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1426
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10283
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2132
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 697
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 959
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3404
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 346
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3909
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15776
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5177
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6829
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4795
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18569
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3139
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2483
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.37585e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.228e0

FS
type: SiteQuality
SIO_000300: 7.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.02e-1

MQ
type: SiteQuality
SIO_000300: 5.921e1

VQSLOD
type: SiteQuality
SIO_000300: 3.45e0

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.1e-1

QD
type: SiteQuality
SIO_000300: 1.339e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000161010
ensembl transcript: ENST00000520900
gene symbol: C5orf45
hgvsc: ENST00000520900.1:n.123C>T
variant of: http://identifiers.org/hgnc/30817

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000161010
ensembl transcript: ENST00000521675
gene symbol: C5orf45
hgvsc: ENST00000521675.1:n.18C>T
variant of: http://identifiers.org/hgnc/30817

GenotypeDepth
all individuals: 12636
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 347
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 959
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 457
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3404
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 445
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 5224
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2132
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4279
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1425
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10284
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7725
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 696
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10284
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2483
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5176
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3139
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6828
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3909
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4795
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18568
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15774
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998231043684226e-5
allele num: 66706
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.917e1

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.66e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.34e-1

DP
type: SiteQuality
SIO_000300: 2.375815e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.1e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000161010
ensembl protein: ENSP00000427849
ensembl transcript: ENST00000520698
gene symbol: C5orf45
hgvsc: ENST00000520698.1:c.127-2143G>A
variant of: http://identifiers.org/hgnc/30817

GenotypeDepth
all individuals: 346
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1425
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5224
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3404
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 958
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 696
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4273
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12638
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2132
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7725
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10284
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10285
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 444
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 457
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3142
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15771
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5177
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4794
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2483
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6829
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18565
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3909
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.222e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.93e-1

FS
type: SiteQuality
SIO_000300: 1.651e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.224e0

MQ
type: SiteQuality
SIO_000300: 5.935e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.04e-1

DP
type: SiteQuality
SIO_000300: 2.375604e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000161010
ensembl transcript: ENST00000523267
gene symbol: C5orf45
hgvsc: ENST00000523267.1:n.10T>C
variant of: http://identifiers.org/hgnc/30817

GenotypeDepth
all individuals: 1424
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 457
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7725
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3404
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10284
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12640
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 696
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4264
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 346
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 958
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2132
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10284
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 444
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5224
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15763
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3142
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6824
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2483
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18564
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5177
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4794
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3909
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.912e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.57e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.87e-2

FS
type: SiteQuality
SIO_000300: 6.222e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 2.375491e6

MQRankSum
type: SiteQuality
SIO_000300: 6.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.56e-1

QD
type: SiteQuality
SIO_000300: 1.517e1

GenotypeDepth
all individuals: 10255
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7724
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 697
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 39
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12628
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4160
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10283
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 99
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1425
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2131
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3404
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 457
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5224
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 443
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 958
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 346
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2481
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18562
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3140
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6795
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15637
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4789
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3909
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5175
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728608470181504e-4
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.78e-1

QD
type: SiteQuality
SIO_000300: 1.151e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.456e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: 6.899999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 1.765e0

DP
type: SiteQuality
SIO_000300: 2.373797e6

MQ
type: SiteQuality
SIO_000300: 5.942e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 67
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 457
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 92
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10188
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 213
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10281
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4041
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3405
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7727
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5224
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 957
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 696
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 443
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12627
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1424
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2131
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3134
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4787
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2481
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3910
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6774
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18557
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15441
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5170
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500015000150001e-5
allele num: 66666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.371778e6

MQ
type: SiteQuality
SIO_000300: 5.874e1

QD
type: SiteQuality
SIO_000300: 6.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.22e-1

FS
type: SiteQuality
SIO_000300: 1.9012e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

VQSLOD
type: SiteQuality
SIO_000300: -3.384e0

GenotypeDepth
all individuals: 302
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3943
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10188
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10277
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1424
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12597
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5223
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7723
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 132
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 957
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2132
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3404
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 443
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 346
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 696
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3129
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4785
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6760
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5170
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18558
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3910
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2479
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15330
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.500855162480871e-5
allele num: 66654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.239e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

VQSLOD
type: SiteQuality
SIO_000300: 8.2e-2

DP
type: SiteQuality
SIO_000300: 2.370106e6

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

MQRankSum
type: SiteQuality
SIO_000300: 8.69e-1

GenotypeDepth
all individuals: 3871
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 12579
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3404
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 5221
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10160
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 346
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2131
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 696
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10273
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7722
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 957
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 373
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 443
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1424
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 457
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6737
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3127
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15228
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18555
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5167
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2479
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4784
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3910
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500510173458976e-5
allele num: 66644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 2.368511e6

MQRankSum
type: SiteQuality
SIO_000300: -2.15e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.13e0

QD
type: SiteQuality
SIO_000300: 1.356e1

FS
type: SiteQuality
SIO_000300: 7.341e0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.97e-1

GenotypeDepth
all individuals: 697
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 92
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3403
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10277
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 346
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7722
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 496
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5222
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1424
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12544
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 456
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 957
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 275
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2131
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 443
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10085
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6710
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3124
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14953
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18554
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 181
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4783
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5166
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3910
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2480
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

FS
type: SiteQuality
SIO_000300: 2.847e0

DP
type: SiteQuality
SIO_000300: 2.36606e6

QD
type: SiteQuality
SIO_000300: 1.476e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.181e0

VQSLOD
type: SiteQuality
SIO_000300: 9.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.46e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

GenotypeDepth
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 443
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 755
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1424
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3402
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 696
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5214
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 346
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 853
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10251
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 456
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 957
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9818
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12385
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3365
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7707
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2131
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3097
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3902
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 563
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6628
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14222
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4761
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2481
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5134
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18543
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501366243281386e-5
allele num: 66606
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

QD
type: SiteQuality
SIO_000300: 1.327e1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

MQRankSum
type: SiteQuality
SIO_000300: 8.02e-1

FS
type: SiteQuality
SIO_000300: 3.953e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.29e0

DP
type: SiteQuality
SIO_000300: 2.356031e6

GenotypeDepth
all individuals: 1164
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1425
bin: 6.25e1
variant carriers: 2

GenotypeDepth
all individuals: 8427
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11167
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7658
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5198
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2130
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3400
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3034
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3656
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 160
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9993
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 346
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 443
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 696
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 456
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 956
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3013
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6220
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3887
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2462
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1098
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18524
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 635
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5042
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4731
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10635
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1335
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.006704952043056e-5
allele num: 66518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16374
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.019e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.065e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.946e0

MQRankSum
type: SiteQuality
SIO_000300: 6.71e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.81e-1

DP
type: SiteQuality
SIO_000300: 2.316625e6

GenotypeDepth
all individuals: 7863
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 696
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 346
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3037
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3403
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 181
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1160
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1423
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7641
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 456
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5194
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4803
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 956
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 443
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10670
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9908
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2456
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3882
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1199
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1430
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 825
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2988
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5023
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 830
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9114
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6063
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18519
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4719
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1614
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.631773969430292e-4
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.603e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.664e0

MQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.51e-1

DP
type: SiteQuality
SIO_000300: 2.306372e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

GenotypeDepth
all individuals: 554
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 651
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3675
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1678
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1147
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 144
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2985
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5958
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 817
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 751
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 472
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2542
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13020
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8660
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12199
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 370
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2893
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4894
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1636
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6405
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4263
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16504
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3357
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13571
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3032
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64916
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.478e0

VQSLOD
type: SiteQuality
SIO_000300: 5.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.84e-1

DP
type: SiteQuality
SIO_000300: 2.141539e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.062e0

QD
type: SiteQuality
SIO_000300: 1.514e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

GenotypeDepth
all individuals: 1144
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 370
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5953
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1739
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13045
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1704
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 144
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3223
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 258
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 572
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 441
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2540
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2901
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 555
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 472
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12314
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3673
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 818
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 613
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16495
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 138
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3348
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4238
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2172
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6436
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3018
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2286
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14369
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4836
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.75284837861525e-4
allele num: 11410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64922
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.072e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 8.79e-1

DP
type: SiteQuality
SIO_000300: 2.145382e6

FS
type: SiteQuality
SIO_000300: 3.513e0

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

MQRankSum
type: SiteQuality
SIO_000300: 7.39e-1

QD
type: SiteQuality
SIO_000300: 1.548e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

GenotypeDepth
all individuals: 1707
bin: 1.25e1
variant carriers: 4

GenotypeDepth
all individuals: 5945
bin: 4.25e1
variant carriers: 8

GenotypeDepth
all individuals: 559
bin: 7.25e1
variant carriers: 7

GenotypeDepth
all individuals: 821
bin: 6.75e1
variant carriers: 7

GenotypeDepth
all individuals: 12329
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 510
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13066
bin: 3.25e1
variant carriers: 4

GenotypeDepth
all individuals: 1148
bin: 6.25e1
variant carriers: 9

GenotypeDepth
all individuals: 145
bin: 9.25e1
variant carriers: 2

GenotypeDepth
all individuals: 3669
bin: 4.75e1
variant carriers: 9

GenotypeDepth
all individuals: 8645
bin: 3.75e1
variant carriers: 3

GenotypeDepth
all individuals: 2923
bin: 7.5e0
variant carriers: 7

GenotypeDepth
all individuals: 186
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 369
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3288
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 476
bin: 9.75e1
variant carriers: 4

GenotypeDepth
all individuals: 372
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1745
bin: 5.75e1
variant carriers: 13

GenotypeDepth
all individuals: 2540
bin: 5.25e1
variant carriers: 5

GenotypeQuality
all individuals: 6445
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 127
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14517
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4830
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2167
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16508
bin: 9.75e1
variant carriers: 79

GenotypeQuality
all individuals: 4235
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 150
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 763
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3345
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3010
bin: 7.25e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539788125153979e-5
allele num: 64944
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.789524733268671e-4
allele num: 10310
num of homozygotes: 0

Latino
type: Population
allele count: 49
allele frequency: 4.255688726767413e-3
allele num: 11514
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 25
allele frequency: 2.166753336800139e-3
allele num: 11538
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.92e-1

DP
type: SiteQuality
SIO_000300: 2.147908e6

QD
type: SiteQuality
SIO_000300: 1.447e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.33e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.67e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.24e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.4e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

GenotypeDepth
all individuals: 1698
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2537
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1140
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 341
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5947
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8651
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3344
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13086
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12353
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3663
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 478
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1733
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 816
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 368
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 143
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 551
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 472
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4242
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6469
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14617
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16454
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 765
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2568
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4839
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2175
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3348
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3015
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161170459823502e-4
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11590
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.27e-1

FS
type: SiteQuality
SIO_000300: 6.71e0

VQSLOD
type: SiteQuality
SIO_000300: -5.7e-3

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

QD
type: SiteQuality
SIO_000300: 1.443e1

DP
type: SiteQuality
SIO_000300: 2.146668e6

GenotypeDepth
all individuals: 551
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1731
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12428
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3515
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 368
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 472
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3667
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1140
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2538
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13098
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2934
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5946
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8653
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 300
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 143
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 816
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 295
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4835
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3344
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6474
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2731
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2177
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14876
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16453
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4238
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3017
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11836
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537373551025428e-5
allele num: 65046
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-2

FS
type: SiteQuality
SIO_000300: 8.738e0

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

DP
type: SiteQuality
SIO_000300: 2.151309e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.237e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

GenotypeDepth
all individuals: 2934
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1731
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12428
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 300
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 551
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2538
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 295
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3667
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5946
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3515
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 143
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1140
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 368
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8653
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1668
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13098
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 816
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16453
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 334
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2177
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6474
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3017
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2731
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14876
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4835
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4238
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3344
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537373551025428e-5
allele num: 65046
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11836
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.237e1

FS
type: SiteQuality
SIO_000300: 8.738e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.151309e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

GenotypeDepth
all individuals: 5945
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 369
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2537
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12452
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1731
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 13109
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 202
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8655
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 255
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 552
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 299
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1575
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3663
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3721
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 142
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1140
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 474
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 817
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2178
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3346
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4842
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15098
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2750
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6497
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16456
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 48
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3016
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4240
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.074575542660649e-4
allele num: 65142
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.68429207824908e-5
allele num: 10326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12050
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.45e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.32e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

DP
type: SiteQuality
SIO_000300: 2.155201e6

VQSLOD
type: SiteQuality
SIO_000300: 5.12e0

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

QD
type: SiteQuality
SIO_000300: 1.94e1

GenotypeDepth
all individuals: 13118
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5945
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 472
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2815
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8652
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 330
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 142
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2537
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1140
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3789
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 255
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 368
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 816
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3662
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1550
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1730
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12467
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3017
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2684
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4241
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15147
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6500
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3346
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4842
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16449
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2178
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12080
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535155050660117e-5
allele num: 65140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.506e-1

QD
type: SiteQuality
SIO_000300: 1.697e1

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.897e0

MQRankSum
type: SiteQuality
SIO_000300: -8.82e-1

DP
type: SiteQuality
SIO_000300: 2.156334e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

FS
type: SiteQuality
SIO_000300: 6.359e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.048e0

GenotypeDepth
all individuals: 5944
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2571
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 4221
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12539
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 358
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 471
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13121
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8656
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3661
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1349
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 370
bin: 7.75e1
variant carriers: 2

GenotypeDepth
all individuals: 551
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2539
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 817
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1140
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 142
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2180
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2521
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15565
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4857
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3029
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6535
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16450
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3347
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4245
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.063913229977327e-5
allele num: 65276
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.671179883945841e-5
allele num: 10340
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12564
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.163864e6

MQ
type: SiteQuality
SIO_000300: 5.937e1

VQSLOD
type: SiteQuality
SIO_000300: 4.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.28e-1

QD
type: SiteQuality
SIO_000300: 1.393e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.195e0

GenotypeDepth
all individuals: 12556
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5946
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4377
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 350
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8657
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 142
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 256
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1140
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13126
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 551
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 67
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2501
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 471
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1270
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3661
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 816
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 368
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1729
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3032
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6555
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 550
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16446
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4248
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2474
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15744
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3347
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4858
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.825950853028643e-5
allele num: 12778
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530456075910621e-5
allele num: 65340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.166043e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.25e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.67e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.26e0

QD
type: SiteQuality
SIO_000300: 1.414e1

GenotypeDepth
all individuals: 347
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2538
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 552
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2343
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1729
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 368
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13131
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 142
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 46
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1140
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12584
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 816
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8656
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3662
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 471
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5945
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4647
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 255
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6587
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16446
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 502
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4249
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3036
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3347
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2336
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15999
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4869
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.056421541659025e-5
allele num: 65436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.22e0

DP
type: SiteQuality
SIO_000300: 2.169849e6

MQRankSum
type: SiteQuality
SIO_000300: 1.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

FS
type: SiteQuality
SIO_000300: 1.274e1

MQ
type: SiteQuality
SIO_000300: 5.982e1

QD
type: SiteQuality
SIO_000300: 1.519e1

VQSLOD
type: SiteQuality
SIO_000300: -2.742e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.32e0

GenotypeDepth
all individuals: 255
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2117
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2538
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 473
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 3661
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8654
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12642
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 551
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 816
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1140
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13142
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4990
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1013
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1727
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 369
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5945
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 142
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 185
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6607
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4253
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2122
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3047
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3348
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4879
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2182
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16446
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 237
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16238
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.052409877598364e-5
allele num: 65522
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.85951370127364e-4
allele num: 10364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.405e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.77e0

DP
type: SiteQuality
SIO_000300: 2.175356e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.61e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 6.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.795e0

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-2

GenotypeDepth
all individuals: 142
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8653
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 816
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 471
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 368
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2538
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12835
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 700
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 309
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3661
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5745
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1470
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13184
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5948
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1140
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 551
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1726
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 255
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4277
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6742
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1507
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16444
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 192
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3094
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16942
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4929
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3352
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2188
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65884
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.941552131056504e-5
allele num: 14406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.422e0

QD
type: SiteQuality
SIO_000300: 2.012e1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.711e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.68e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.860000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.189092e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

GenotypeDepth
all individuals: 2565
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3664
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 476
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 936
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5938
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13201
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 486
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12996
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 256
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 373
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8628
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1162
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 551
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 274
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 831
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6279
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1751
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3344
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4291
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6830
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4963
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3123
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17420
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16367
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511624391571182e-5
allele num: 66154
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15216
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.08e-1

QD
type: SiteQuality
SIO_000300: 1.479e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.95e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.707e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-1

DP
type: SiteQuality
SIO_000300: 2.203946e6

GenotypeDepth
all individuals: 554
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3663
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 875
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 824
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 255
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2564
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6348
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 255
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 188
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1155
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1746
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13046
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 455
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13215
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8632
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 370
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 478
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5934
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4973
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16367
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4296
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3345
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3132
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6858
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 940
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17565
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66188
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15314
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.313e1

MQRankSum
type: SiteQuality
SIO_000300: 1.81e0

VQSLOD
type: SiteQuality
SIO_000300: 3.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

DP
type: SiteQuality
SIO_000300: 2.204745e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.037e0

GenotypeDepth
all individuals: 478
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 255
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2564
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 875
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1155
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 255
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13046
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3663
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 824
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6348
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5934
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1746
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8632
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13215
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 554
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 455
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 141
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 370
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 188
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4973
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4296
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6858
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 940
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17565
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16367
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3132
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3345
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66188
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.62e0

QD
type: SiteQuality
SIO_000300: 1.313e1

DP
type: SiteQuality
SIO_000300: 2.204745e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.037e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

GenotypeDepth
all individuals: 353
bin: 7.75e1
variant carriers: 7

GenotypeDepth
all individuals: 13324
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1137
bin: 6.25e1
variant carriers: 10

GenotypeDepth
all individuals: 677
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 810
bin: 6.75e1
variant carriers: 12

GenotypeDepth
all individuals: 6485
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 228
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 376
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 534
bin: 7.25e1
variant carriers: 8

GenotypeDepth
all individuals: 135
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 5947
bin: 4.25e1
variant carriers: 2

GenotypeDepth
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13243
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1711
bin: 5.75e1
variant carriers: 7

GenotypeDepth
all individuals: 177
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 8648
bin: 3.75e1
variant carriers: 2

GenotypeDepth
all individuals: 3656
bin: 4.75e1
variant carriers: 5

GenotypeDepth
all individuals: 460
bin: 9.75e1
variant carriers: 4

GenotypeDepth
all individuals: 2548
bin: 5.25e1
variant carriers: 4

GenotypeDepth
all individuals: 251
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 139
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 155
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 156
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4254
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 245
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 109
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3322
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 766
bin: 2.25e1
variant carriers: 4

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 211
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 187
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2179
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4958
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3124
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 17584
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 180
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6856
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 16188
bin: 9.75e1
variant carriers: 22

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.537616843633724e-5
allele num: 66114
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15570
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 4.494382022471911e-3
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 54
allele frequency: 8.269525267993875e-3
allele num: 6530
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.84e1

QD
type: SiteQuality
SIO_000300: 8.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e-2

DP
type: SiteQuality
SIO_000300: 2.203343e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.794e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
type: SiteQuality
SIO_000300: 1.92502e2

VQSLOD
type: SiteQuality
SIO_000300: -1.693e2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.3e-1

GenotypeDepth
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 176
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 457
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 8657
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13386
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3641
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 798
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 341
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 247
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 511
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 160
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13407
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1104
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 283
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6703
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5942
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 134
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2525
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 524
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1704
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18055
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6972
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3181
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16385
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 557
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3378
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4332
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5046
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2203
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.520523175215478e-5
allele num: 66364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.203513e6

FS
type: SiteQuality
SIO_000300: 3.342e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.136e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.92e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.79e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.84e-1

QD
type: SiteQuality
SIO_000300: 1.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.32e-1

GenotypeDepth
all individuals: 134
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5944
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 244
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 796
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 115
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3642
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8669
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13439
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 401
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 225
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6757
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 344
bin: 7.75e1
variant carriers: 2

GenotypeDepth
all individuals: 1104
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13501
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1702
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2525
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 177
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 458
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 523
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2206
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18089
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6991
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3185
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3380
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5045
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16368
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4341
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16004
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.03030303030303e-4
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66406
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.207056e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.477e0

MQRankSum
type: SiteQuality
SIO_000300: -1.295e0

MQ
type: SiteQuality
SIO_000300: 5.85e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.73e0

FS
type: SiteQuality
SIO_000300: 1.6946e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.620000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.57e-1

QD
type: SiteQuality
SIO_000300: 5.91e0

GenotypeDepth
all individuals: 114
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6831
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1106
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 451
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3644
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13544
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 205
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 243
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5951
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1703
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13661
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 524
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2531
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 342
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 799
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8685
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3232
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4410
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2222
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16403
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 226
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3402
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5117
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18315
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7094
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502765087761481e-5
allele num: 66544
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

VQSLOD
type: SiteQuality
SIO_000300: 5.95e-1

FS
type: SiteQuality
SIO_000300: 2.289e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.342e0

DP
type: SiteQuality
SIO_000300: 2.21323e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.65e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

QD
type: SiteQuality
SIO_000300: 9.91e0

GenotypeDepth
all individuals: 243
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 799
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6850
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5951
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 524
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 103
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3644
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 451
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 55
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13554
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1106
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8686
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13665
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 190
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2530
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1703
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 342
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7092
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3403
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5123
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18343
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16402
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4411
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2222
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3232
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQRankSum
type: SiteQuality
SIO_000300: 1.92e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

DP
type: SiteQuality
SIO_000300: 2.213702e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.462e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.136e0

QD
type: SiteQuality
SIO_000300: 9.92e0

GenotypeDepth
all individuals: 2530
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13612
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 5953
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 34
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13716
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 342
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 799
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1106
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3645
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8697
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6935
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1704
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 173
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 243
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 524
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 450
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7145
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4426
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16407
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5148
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18497
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2230
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3256
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3407
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.216101179618144e-4
allele num: 16446
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66632
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.217081e6

VQSLOD
type: SiteQuality
SIO_000300: -3.594e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.44e0

FS
type: SiteQuality
SIO_000300: 2.2431e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.44e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

QD
type: SiteQuality
SIO_000300: 1.195e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

GenotypeDepth
all individuals: 342
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2531
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 243
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13738
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13630
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3646
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8705
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 799
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 524
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5955
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 451
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1106
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1704
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 74
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6907
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5152
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4427
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3259
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7152
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3410
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18469
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2230
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16404
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500645277469312e-5
allele num: 66638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

QD
type: SiteQuality
SIO_000300: 1.507e1

FS
type: SiteQuality
SIO_000300: 4.197e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.01e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.92e-1

DP
type: SiteQuality
SIO_000300: 2.218046e6

GenotypeDepth
all individuals: 13744
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8706
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 450
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1107
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1703
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 63
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2531
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13634
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5957
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 524
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6907
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3646
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 800
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 342
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 243
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16409
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4437
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3269
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18485
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7157
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5165
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2235
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3412
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5004651441947e-5
allele num: 66646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.478e1

DP
type: SiteQuality
SIO_000300: 2.21826e6

MQ
type: SiteQuality
SIO_000300: 5.907e1

FS
type: SiteQuality
SIO_000300: 3.535e0

VQSLOD
type: SiteQuality
SIO_000300: 2.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.95e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

GenotypeDepth
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2530
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5965
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1703
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13648
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 800
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1107
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13765
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 242
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3648
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6902
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8708
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 451
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 341
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7165
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3272
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4443
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18491
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2240
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16413
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5175
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999400119976005e-5
allele num: 66680
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.65e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

MQ
type: SiteQuality
SIO_000300: 5.935e1

QD
type: SiteQuality
SIO_000300: 1.343e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
SIO_000300: 5.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.92e-1

DP
type: SiteQuality
SIO_000300: 2.219425e6

GenotypeDepth
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 525
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 800
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13770
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1703
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 449
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2530
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13651
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3649
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8708
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5965
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6897
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 242
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1108
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 341
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16412
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18486
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4445
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5174
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7167
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2240
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3272
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66682
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.739e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.85e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.955e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.61e0

DP
type: SiteQuality
SIO_000300: 2.21916e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 6.27e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6888
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2530
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5967
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8711
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1108
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13777
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 800
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 457
bin: 9.75e1
variant carriers: 10

GenotypeDepth
all individuals: 3649
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 13649
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 341
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 524
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1703
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 241
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 131
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5172
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18485
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3272
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2238
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16413
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 7164
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4445
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 12
allele frequency: 1.386642015253062e-3
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

DP
type: SiteQuality
SIO_000300: 2.220526e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.41e-1

QD
type: SiteQuality
SIO_000300: 1.174e1

FS
type: SiteQuality
SIO_000300: 5.669999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

VQSLOD
type: SiteQuality
SIO_000300: 4.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.38e-1

GenotypeDepth
all individuals: 13654
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 447
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1706
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3651
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1108
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8714
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2531
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 241
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 341
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6882
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13781
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 524
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 801
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5967
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5177
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4448
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3272
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2239
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16417
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7167
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18491
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.49829064955317e-5
allele num: 66692
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 1.268e1

DP
type: SiteQuality
SIO_000300: 2.219522e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.62e-1

FS
type: SiteQuality
SIO_000300: 5.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.51e-1

GenotypeDepth
all individuals: 24
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2531
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 131
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13784
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6881
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1108
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 241
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13659
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1706
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5968
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 341
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 447
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 525
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3649
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8713
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 800
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4450
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18495
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16416
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2239
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7169
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3271
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.729e0

MQRankSum
type: SiteQuality
SIO_000300: 2.13e-1

FS
type: SiteQuality
SIO_000300: 2.318e0

MQ
type: SiteQuality
SIO_000300: 5.882e1

QD
type: SiteQuality
SIO_000300: 1.285e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 2.219495e6

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1706
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13662
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5967
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 524
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1108
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 131
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3648
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13784
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6883
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 449
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 341
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8713
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 800
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 242
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2531
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16416
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2243
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3417
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7174
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18495
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5179
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3271
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4447
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.497751124437781e-5
allele num: 66700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.276e0

QD
type: SiteQuality
SIO_000300: 1.133e1

FS
type: SiteQuality
SIO_000300: 1.377e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.99e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.41e-1

DP
type: SiteQuality
SIO_000300: 2.219773e6

MQ
type: SiteQuality
SIO_000300: 5.922e1

GenotypeDepth
all individuals: 173
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13665
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6883
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13787
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 455
bin: 9.75e1
variant carriers: 9

GenotypeDepth
all individuals: 1108
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 241
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3646
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 800
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1707
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5966
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8711
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 131
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2531
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 523
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 341
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7172
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16419
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3274
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18504
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3416
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2242
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4448
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 1.345895020188425e-3
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.22037e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.65e-1

FS
type: SiteQuality
SIO_000300: 2.02e0

QD
type: SiteQuality
SIO_000300: 1.44e1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

MQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.27e0

GenotypeDepth
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 799
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6874
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8710
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2530
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5969
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 240
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1706
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 523
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 174
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13665
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13800
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 342
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3647
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1110
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 453
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3276
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18511
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2242
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4446
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16419
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3415
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7167
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

FS
type: SiteQuality
SIO_000300: 5.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.05e0

VQSLOD
type: SiteQuality
SIO_000300: -3.345e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.912e0

DP
type: SiteQuality
SIO_000300: 2.220537e6

QD
type: SiteQuality
SIO_000300: 1.331e1

MQRankSum
type: SiteQuality
SIO_000300: -2.457e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeDepth
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 795
bin: 6.75e1
variant carriers: 2

GenotypeDepth
all individuals: 8706
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13658
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1705
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13798
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5964
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2528
bin: 5.25e1
variant carriers: 3

GenotypeDepth
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 341
bin: 7.75e1
variant carriers: 2

GenotypeDepth
all individuals: 131
bin: 9.25e1
variant carriers: 2

GenotypeDepth
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6867
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 173
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 1109
bin: 6.25e1
variant carriers: 3

GenotypeDepth
all individuals: 3641
bin: 4.75e1
variant carriers: 3

GenotypeDepth
all individuals: 491
bin: 9.75e1
variant carriers: 50

GenotypeDepth
all individuals: 520
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 240
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 7163
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2242
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18508
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3275
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16432
bin: 9.75e1
variant carriers: 73

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3415
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4445
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 67
allele frequency: 6.441069025187464e-3
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.454828122300915e-4
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997601918465228e-5
allele num: 66720
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.223935e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.96e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

QD
type: SiteQuality
SIO_000300: 1.281e1

MQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-1

FS
type: SiteQuality
SIO_000300: 2.084e0

GenotypeDepth
all individuals: 13669
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 793
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 521
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 171
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8715
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6876
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2531
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3642
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1708
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5973
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 129
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1108
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 238
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 445
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 339
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13812
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3277
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3422
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7169
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2244
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16387
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4447
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18531
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.884060757546626e-4
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.269e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.62e0

DP
type: SiteQuality
SIO_000300: 2.218789e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 1.303e0

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-2

QD
type: SiteQuality
SIO_000300: 1.159e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-2

GenotypeDepth
all individuals: 6875
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 443
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1708
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1108
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2531
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8715
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3643
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 521
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13809
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13673
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 339
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 238
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 793
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5973
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 129
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 171
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16386
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3421
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18532
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7168
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2244
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4447
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3277
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5180
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.05e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.699e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.218599e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.716e1

GenotypeDepth
all individuals: 793
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 521
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 339
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 172
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1108
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6865
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13669
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3642
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 129
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8718
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13797
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 238
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 442
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5974
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1708
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2531
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3277
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3422
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18512
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7167
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4446
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2244
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16385
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 1.667e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.67e0

VQSLOD
type: SiteQuality
SIO_000300: -3.787e0

MQRankSum
type: SiteQuality
SIO_000300: -8.070000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

FS
type: SiteQuality
SIO_000300: 2.5664e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.2e-2

DP
type: SiteQuality
SIO_000300: 2.218255e6

Annotation
canonical: false
consequence: frameshift_variant
consequence: splice_region_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000161010
ensembl protein: ENSP00000430814
ensembl transcript: ENST00000519208
gene symbol: C5orf45
hgvsc: ENST00000519208.1:c.127delG
hgvsp: ENSP00000430814.1:p.Ala43LeufsTer17
variant of: http://identifiers.org/hgnc/30817

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 339
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1708
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5974
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13668
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 793
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13793
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 521
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1108
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6849
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2530
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3642
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 238
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 129
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8718
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 171
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 443
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4445
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3421
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16385
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18480
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7160
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3276
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5178
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2244
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 2.21802e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.32e0

QD
type: SiteQuality
SIO_000300: 1.329e1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e-1

MQ
type: SiteQuality
SIO_000300: 5.986e1

FS
type: SiteQuality
SIO_000300: 9.360000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.81e-1

GenotypeDepth
all individuals: 292
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1108
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 521
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13613
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2532
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 238
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3642
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 339
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6657
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 79
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13635
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 444
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 1708
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8703
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5966
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 793
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 129
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3260
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7080
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18132
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16383
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2240
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4439
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3417
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5166
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500240038406145e-5
allele num: 66656
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.59e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

VQSLOD
type: SiteQuality
SIO_000300: -2.68e-1

DP
type: SiteQuality
SIO_000300: 2.212394e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.63e-1

QD
type: SiteQuality
SIO_000300: 1.678e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeDepth
all individuals: 129
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1708
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 350
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 339
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1109
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 442
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2531
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6620
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 90
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 155
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 521
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 793
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 170
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3642
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8705
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 238
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13600
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13592
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16384
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 292
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5166
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18030
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4437
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3417
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7071
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2241
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3259
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500510173458976e-5
allele num: 66644
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.517e1

VQSLOD
type: SiteQuality
SIO_000300: 7.05e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

FS
type: SiteQuality
SIO_000300: 6.039e0

DP
type: SiteQuality
SIO_000300: 2.211132e6

MQ
type: SiteQuality
SIO_000300: 5.975e1

GenotypeDepth
all individuals: 128
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1174
bin: 6.25e1
variant carriers: 134

GenotypeDepth
all individuals: 6382
bin: 2.25e1
variant carriers: 11

GenotypeDepth
all individuals: 1731
bin: 5.75e1
variant carriers: 131

GenotypeDepth
all individuals: 8592
bin: 3.75e1
variant carriers: 67

GenotypeDepth
all individuals: 495
bin: 9.75e1
variant carriers: 86

GenotypeDepth
all individuals: 13311
bin: 2.75e1
variant carriers: 20

GenotypeDepth
all individuals: 269
bin: 8.25e1
variant carriers: 47

GenotypeDepth
all individuals: 554
bin: 7.25e1
variant carriers: 68

GenotypeDepth
all individuals: 704
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 5888
bin: 4.25e1
variant carriers: 78

GenotypeDepth
all individuals: 379
bin: 1.75e1
variant carriers: 5

GenotypeDepth
all individuals: 13389
bin: 3.25e1
variant carriers: 40

GenotypeDepth
all individuals: 3628
bin: 4.75e1
variant carriers: 143

GenotypeDepth
all individuals: 148
bin: 9.25e1
variant carriers: 29

GenotypeDepth
all individuals: 2517
bin: 5.25e1
variant carriers: 122

GenotypeDepth
all individuals: 374
bin: 7.75e1
variant carriers: 67

GenotypeDepth
all individuals: 186
bin: 8.75e1
variant carriers: 34

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5106
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3218
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17422
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 180
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6943
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3352
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16703
bin: 9.75e1
variant carriers: 1185

GenotypeQuality
all individuals: 4376
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 28
allele frequency: 2.422983731394946e-3
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.207505518763797e-3
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 26
allele frequency: 2.503852080123267e-3
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 11
allele frequency: 1.284146626196591e-3
allele num: 8566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1054
allele frequency: 1.582535059007237e-2
allele num: 66602
num of homozygotes: 12

South Asian
type: Population
allele count: 20
allele frequency: 1.211680600993578e-3
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 57
allele frequency: 8.618082854550952e-3
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.612e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

DP
type: SiteQuality
SIO_000300: 2.217141e6

VQSLOD
type: SiteQuality
SIO_000300: 6.18e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.77e0

MQRankSum
type: SiteQuality
SIO_000300: 2.03e-1

GenotypeDepth
all individuals: 417
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13463
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1060
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 317
bin: 7.75e1
variant carriers: 2

GenotypeDepth
all individuals: 5947
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 496
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8680
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 160
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1631
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 768
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13619
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 468
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 781
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2461
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 125
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3569
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5215
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4456
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17546
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3422
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15890
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2261
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3280
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7054
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.423361201987156e-4
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.274e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.684e0

DP
type: SiteQuality
SIO_000300: 2.187291e6

FS
type: SiteQuality
SIO_000300: 3.452e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.01e-1

GenotypeDepth
all individuals: 495
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 187
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 160
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8450
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 315
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6307
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2817
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1060
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 769
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2460
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5910
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1285
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3555
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 227
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12092
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 417
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1630
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 124
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3224
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1130
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4417
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3415
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6655
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5124
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2255
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 932
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 14519
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15873
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.17343346632246e-4
allele num: 8522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504211793020457e-5
allele num: 66480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.146276e6

QD
type: SiteQuality
SIO_000300: 1.298e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-2

FS
type: SiteQuality
SIO_000300: 2.927e0

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.016e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 187
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 12092
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12426
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 417
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1285
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2460
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 495
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8450
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3555
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5910
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2817
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 227
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 160
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 315
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1060
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1630
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 769
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 124
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5124
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14519
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3224
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2255
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1130
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3415
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15873
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 470
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6655
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 932
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4417
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 564
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504211793020457e-5
allele num: 66480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.17e-1

DP
type: SiteQuality
SIO_000300: 2.146276e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.927e0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.016e0

QD
type: SiteQuality
SIO_000300: 1.298e1

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.68e-1

GenotypeDepth
all individuals: 11701
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 417
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1286
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 495
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8371
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1630
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11996
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1062
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2459
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6741
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3553
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 124
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5897
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 768
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 160
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 315
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3271
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3186
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 712
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13868
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6439
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5095
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1319
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15870
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1058
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2252
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3408
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4402
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505162708088744e-5
allele num: 66438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.181e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.171e0

FS
type: SiteQuality
SIO_000300: 1.6525e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.17e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.752e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.607e0

DP
type: SiteQuality
SIO_000300: 2.135839e6

GenotypeDepth
all individuals: 335
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 38
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 272
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 21
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 942
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 154
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 578
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 468
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 73
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2486
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 826
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 84
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 701
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 770
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1652
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3977
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 2.061855670103093e-2
allele num: 194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2724
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

DP
type: SiteQuality
SIO_000300: 2.45712e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-3

QD
type: SiteQuality
SIO_000300: 1.47e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.58e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.0e0

FS
type: SiteQuality
SIO_000300: 4.718e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

GenotypeDepth
all individuals: 466
bin: 5.75e1
variant carriers: 10

GenotypeDepth
all individuals: 84
bin: 7.5e0
variant carriers: 10

GenotypeDepth
all individuals: 159
bin: 6.75e1
variant carriers: 6

GenotypeDepth
all individuals: 326
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 947
bin: 4.25e1
variant carriers: 5

GenotypeDepth
all individuals: 138
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 766
bin: 3.75e1
variant carriers: 5

GenotypeDepth
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 7.25e1
variant carriers: 4

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 40
bin: 7.75e1
variant carriers: 2

GenotypeDepth
all individuals: 22
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 14
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2319
bin: 2.5e0
variant carriers: 28

GenotypeDepth
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 273
bin: 6.25e1
variant carriers: 6

GenotypeDepth
all individuals: 708
bin: 5.25e1
variant carriers: 10

GenotypeDepth
all individuals: 823
bin: 4.75e1
variant carriers: 3

GenotypeDepth
all individuals: 589
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 6

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3994
bin: 9.75e1
variant carriers: 54

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 6

GenotypeQuality
all individuals: 1501
bin: 7.5e0
variant carriers: 15

GenotypeQuality
all individuals: 118
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 3.303964757709251e-3
allele num: 2724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.996802557953637e-4
allele num: 7506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

African
type: Population
allele count: 48
allele frequency: 2.474226804123711e-1
allele num: 194
num of homozygotes: 5

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.698e1

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.73e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.78e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-1

DP
type: SiteQuality
SIO_000300: 2.4638e5

GenotypeDepth
all individuals: 465
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 705
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 22
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 77
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 332
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 768
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 599
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 953
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2231
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 43
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 75
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 278
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 828
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 132
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1931
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3999
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 212
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.332267519317879e-4
allele num: 7506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2730
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.47211e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.99e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.035e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

QD
type: SiteQuality
SIO_000300: 1.572e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.381e0

MQ
type: SiteQuality
SIO_000300: 5.941e1

GenotypeDepth
all individuals: 101
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 768
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 131
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 599
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 953
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 705
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 828
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 278
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 43
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 78
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2268
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 465
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 333
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 299
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2080
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3999
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.47443e5

VQSLOD
type: SiteQuality
SIO_000300: 2.99e0

QD
type: SiteQuality
SIO_000300: 2.898e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.91e-2

MQ
type: SiteQuality
SIO_000300: 5.604e1

GenotypeDepth
all individuals: 705
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 828
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2272
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 332
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 465
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 599
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 768
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 157
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 131
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 953
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 278
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 78
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 43
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2076
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 65
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4000
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 151
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.665689149560117e-4
allele num: 2728
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7506
num of homozygotes: 0