10-11363397-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11363397
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11363397
    reference: chr 10
allele count: 1
allele frequency: 1.052210694669501e-5
allele num: 95038
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1294+48A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1255+48A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1201+48A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1237+48A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1195+48A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.940+48A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1201+48A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1195+48A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1201+48A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1201+48A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1255+48A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1195+48A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*807+48A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1294+48A>G
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

10-11363401-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11363401
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11363400
    reference: chr 10
allele count: 1
allele frequency: 1.069495839661184e-5
allele num: 93502
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*807+54delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1195+54delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1294+54delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1201+54delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1201+54delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1195+54delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1294+54delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1237+54delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1255+54delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1195+54delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1201+54delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1201+54delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1255+54delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.940+54delC
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9235
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15133
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2429
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9479
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: GC
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

10-11367752-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367752
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367752
    reference: chr 10
allele count: 2
allele frequency: 1.733613022901028e-5
allele num: 115366
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1295-47C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1238-47C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1202-47C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.941-47C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1202-47C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1295-47C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1202-47C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1196-47C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1256-47C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1196-47C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*808-47C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1256-47C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-3137C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1202-47C>G
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5549
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5678
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2285
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD

10-11367766-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367766
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367766
    reference: chr 10
allele count: 2
allele frequency: 1.735086927855086e-5
allele num: 115268
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1202-33A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.941-33A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1202-33A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1256-33A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1196-33A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1238-33A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-3123A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1196-33A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1202-33A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1202-33A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1295-33A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1295-33A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*808-33A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1256-33A>G
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9824
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

10-11367776-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367776
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367776
    reference: chr 10
allele count: 1
allele frequency: 9.668935643564357e-6
allele num: 103424
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.941-23C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1196-23C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1202-23C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1238-23C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*808-23C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1256-23C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1196-23C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1202-23C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1295-23C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-3113C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1256-23C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1202-23C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1202-23C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1295-23C>G
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4967
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7445
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9853
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3039
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ

10-11367780-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367780
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367781
    reference: chr 10
allele count: 84
allele frequency: 7.294199374782911e-4
allele num: 115160
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1256-10dupT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1202-10dupT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1202-10dupT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1238-10dupT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.941-10dupT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1256-10dupT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1196-10dupT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1295-10dupT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1202-10dupT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*808-10dupT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-3100dupT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1202-10dupT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1295-10dupT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1196-10dupT
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7096
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 6780
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 7367
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6569
  bin: 2.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

10-11367780-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367780
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367779
    reference: chr 10
allele count: 47524
allele frequency: 4.126780131990274e-1
allele num: 115160
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.941-10delT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1295-10delT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1202-10delT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1256-10delT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1202-10delT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1196-10delT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1196-10delT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1295-10delT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1256-10delT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*808-10delT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-3100delT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1202-10delT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1238-10delT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1202-10delT
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6569
  bin: 2.25e1
  variant carriers: 2038
genotype depth: GenotypeDepth
  all individuals: 6780
  bin: 4.25e1
  variant carriers: 4922
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7819
  bin: 3.25e1
  variant carriers: 4165
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 5.75e1
  variant carriers: 2171
genotype depth: GenotypeDepth
  all individuals: 7367
  bin: 3.75e1
  variant carriers: 4989
genotype depth: GenotypeDepth
  all individuals: 5427
  bin: 4.75e1
  variant carriers: 4271
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.5e0
  variant carriers: 131
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 7.25e1
  variant carriers: 791
genotype depth: GenotypeDepth
  all individuals: 3952
  bin: 5.25e1
  variant carriers: 3222
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 1.75e1
  variant carriers: 1427
genotype depth: GenotypeDepth
  all individuals: 7096
  bin: 2.75e1
  variant carriers: 2957
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 1.25e1
  variant carriers: 732
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.75e1
  variant carriers: 397
genotype quality: GenotypeQuality
num of homozygotes: 9654
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: CT
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

10-11367781-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367781
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367781
    reference: chr 10
allele count: 15
allele frequency: 3.783483831912425e-4
allele num: 39646
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1238-18T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1256-18T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1202-18T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1196-18T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-3108T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1202-18T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1295-18T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1202-18T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*808-18T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1256-18T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1202-18T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1295-18T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1196-18T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.941-18T>C
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4460
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4085
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ

10-11367784-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367784
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367784
    reference: chr 10
allele count: 8
allele frequency: 6.69848446788914e-5
allele num: 119430
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.941-15T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1196-15T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1238-15T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1202-15T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1295-15T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1202-15T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1196-15T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1256-15T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1202-15T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*808-15T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-3105T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1202-15T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1295-15T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1256-15T>C
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4460
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6443
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7015
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7297
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

10-11367793-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367793
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367793
    reference: chr 10
allele count: 1
allele frequency: 8.347384764353328e-6
allele num: 119798
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1196-6C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1202-6C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1256-6C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.941-6C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-3096C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1256-6C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1295-6C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*808-6C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1196-6C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1202-6C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1202-6C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1295-6C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1238-6C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1202-6C>T
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7314
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7427
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2222
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7042
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1295-6C>T
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/10-11367794-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367794
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367794
    reference: chr 10
allele count: 1
allele frequency: 8.345852111500584e-6
allele num: 119820
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1202-5C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*808-5C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1202-5C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1202-5C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1256-5C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1238-5C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.941-5C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1196-5C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1256-5C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1295-5C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1202-5C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1196-5C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1295-5C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-3095C>A
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7042
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1295-5C>A
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

10-11367806-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367806
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367806
    reference: chr 10
allele count: 1
allele frequency: 8.313657676831499e-6
allele num: 120284
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1209G>A
  hgvsp: ENST00000315874.4:c.1209G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1302G>A
  hgvsp: ENST00000450189.1:c.1302G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1302G>A
  hgvsp: ENST00000542579.1:c.1302G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1263G>A
  hgvsp: ENST00000379261.4:c.1263G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1209G>A
  hgvsp: ENST00000399850.3:c.1209G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1245G>A
  hgvsp: ENST00000354897.3:c.1245G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1203G>A
  hgvsp: ENST00000608830.1:c.1203G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1209G>A
  hgvsp: ENST00000427450.1:c.1209G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-3083G>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1263G>A
  hgvsp: ENST00000416382.2:c.1263G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*815G>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1209G>A
  hgvsp: ENST00000354440.2:c.1209G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.948G>A
  hgvsp: ENST00000537122.1:c.948G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1203G>A
  hgvsp: ENST00000417956.2:c.1203G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5874
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu434Glu
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

10-11367821-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367821
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367821
    reference: chr 10
allele count: 1
allele frequency: 8.292836647703714e-6
allele num: 120586
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1224T>C
  hgvsp: ENST00000315874.4:c.1224T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1218T>C
  hgvsp: ENST00000608830.1:c.1218T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*830T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.963T>C
  hgvsp: ENST00000537122.1:c.963T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1317T>C
  hgvsp: ENST00000542579.1:c.1317T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1218T>C
  hgvsp: ENST00000417956.2:c.1218T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1224T>C
  hgvsp: ENST00000354440.2:c.1224T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1260T>C
  hgvsp: ENST00000354897.3:c.1260T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1278T>C
  hgvsp: ENST00000379261.4:c.1278T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1224T>C
  hgvsp: ENST00000399850.3:c.1224T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1278T>C
  hgvsp: ENST00000416382.2:c.1278T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1317T>C
  hgvsp: ENST00000450189.1:c.1317T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1224T>C
  hgvsp: ENST00000427450.1:c.1224T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-3068T>C
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7085
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe439Phe
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

10-11367857-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367857
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367857
    reference: chr 10
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1353C>T
  hgvsp: ENST00000542579.1:c.1353C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1254C>T
  hgvsp: ENST00000417956.2:c.1254C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1260C>T
  hgvsp: ENST00000315874.4:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1314C>T
  hgvsp: ENST00000379261.4:c.1314C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1254C>T
  hgvsp: ENST00000608830.1:c.1254C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1260C>T
  hgvsp: ENST00000427450.1:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*866C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-3032C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1314C>T
  hgvsp: ENST00000416382.2:c.1314C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.999C>T
  hgvsp: ENST00000537122.1:c.999C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1296C>T
  hgvsp: ENST00000354897.3:c.1296C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1260C>T
  hgvsp: ENST00000354440.2:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1260C>T
  hgvsp: ENST00000399850.3:c.1260C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1353C>T
  hgvsp: ENST00000450189.1:c.1353C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8400
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5882
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp451Asp
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

10-11367878-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367878
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367878
    reference: chr 10
allele count: 1
allele frequency: 8.283219853221344e-6
allele num: 120726
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1317T>G
  hgvsp: ENST00000354897.3:c.1317T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1275T>G
  hgvsp: ENST00000608830.1:c.1275T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1281T>G
  hgvsp: ENST00000315874.4:c.1281T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1275T>G
  hgvsp: ENST00000417956.2:c.1275T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*887T>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-3011T>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1374T>G
  hgvsp: ENST00000542579.1:c.1374T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1281T>G
  hgvsp: ENST00000354440.2:c.1281T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1281T>G
  hgvsp: ENST00000427450.1:c.1281T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1335T>G
  hgvsp: ENST00000379261.4:c.1335T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1281T>G
  hgvsp: ENST00000399850.3:c.1281T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1335T>G
  hgvsp: ENST00000416382.2:c.1335T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1374T>G
  hgvsp: ENST00000450189.1:c.1374T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1020T>G
  hgvsp: ENST00000537122.1:c.1020T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6840
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro458Pro
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

10-11367923-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367923
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367923
    reference: chr 10
allele count: 1
allele frequency: 8.324315325064513e-6
allele num: 120130
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-2966C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1419C>T
  hgvsp: ENST00000542579.1:c.1419C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1419C>T
  hgvsp: ENST00000450189.1:c.1419C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1326C>T
  hgvsp: ENST00000315874.4:c.1326C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1326C>T
  hgvsp: ENST00000399850.3:c.1326C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1380C>T
  hgvsp: ENST00000379261.4:c.1380C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1362C>T
  hgvsp: ENST00000354897.3:c.1362C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1326C>T
  hgvsp: ENST00000427450.1:c.1326C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1320C>T
  hgvsp: ENST00000608830.1:c.1320C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1065C>T
  hgvsp: ENST00000537122.1:c.1065C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1326C>T
  hgvsp: ENST00000354440.2:c.1326C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*932C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1380C>T
  hgvsp: ENST00000416382.2:c.1380C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1320C>T
  hgvsp: ENST00000417956.2:c.1320C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6840
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr473Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

10-11367946-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367946
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367946
    reference: chr 10
allele count: 1
allele frequency: 8.412126922171002e-6
allele num: 118876
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1339+4T>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1381+4T>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1345+4T>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1399+4T>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1345+4T>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1399+4T>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*951+4T>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1345+4T>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1438+4T>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1345+4T>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1438+4T>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1084+4T>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1339+4T>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-2943T>A
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7100
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6839
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7547
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1438+4T>A
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD

10-11367950-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367950
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367950
    reference: chr 10
allele count: 1
allele frequency: 8.429997302400863e-6
allele num: 118624
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1381+8A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1084+8A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*951+8A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1345+8A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1399+8A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1345+8A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1345+8A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1339+8A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-2939A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1399+8A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1345+8A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1438+8A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1339+8A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1438+8A>G
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7098
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.1438+8A>G
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff

10-11367953-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367953
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367953
    reference: chr 10
allele count: 3
allele frequency: 2.5312610742672e-5
allele num: 118518
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*951+11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1345+11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1339+11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1339+11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1381+11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-2936G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1399+11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1084+11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1345+11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1399+11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1438+11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1345+11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1438+11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1345+11G>T
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5879
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5884
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7098
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6837
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4459
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD

10-11367956-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367956
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367956
    reference: chr 10
allele count: 1
allele frequency: 8.444376889429329e-6
allele num: 118422
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1345+14A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1399+14A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*951+14A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1345+14A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1084+14A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1438+14A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1399+14A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1345+14A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1345+14A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1339+14A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-2933A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1438+14A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1339+14A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1381+14A>G
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6837
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5660
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7097
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/10-11367959-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367959
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367959
    reference: chr 10
allele count: 1
allele frequency: 8.458662516282926e-6
allele num: 118222
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1438+17A>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1084+17A>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1345+17A>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1345+17A>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1345+17A>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1339+17A>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1339+17A>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1381+17A>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1399+17A>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1399+17A>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*951+17A>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1438+17A>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-2930A>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1345+17A>C
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5886
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1989
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

10-11367965-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367965
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367965
    reference: chr 10
allele count: 1
allele frequency: 8.49213628180305e-6
allele num: 117756
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1438+23G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1345+23G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1339+23G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1084+23G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*951+23G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1345+23G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1399+23G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1381+23G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-2924G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1399+23G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1438+23G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1345+23G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1345+23G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1339+23G>C
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6837
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5887
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum

10-11367973-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367973
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367973
    reference: chr 10
allele count: 1
allele frequency: 8.530967411704487e-6
allele num: 117220
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1345+31C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*951+31C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1345+31C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1399+31C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1399+31C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1339+31C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-2916C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1084+31C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1345+31C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1345+31C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1381+31C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1438+31C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1339+31C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1438+31C>G
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5887
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7476
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7093
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4903
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4459
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

10-11367978-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367978
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367978
    reference: chr 10
allele count: 1
allele frequency: 8.541898009737763e-6
allele num: 117070
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1084+36G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1345+36G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-2911G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1345+36G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*951+36G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1399+36G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1438+36G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1345+36G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1438+36G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1381+36G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1339+36G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1339+36G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1345+36G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1399+36G>C
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6837
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6177
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2746
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4843
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4459
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5887
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: African
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

10-11367979-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11367979
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11367979
    reference: chr 10
allele count: 26
allele frequency: 2.224047081365907e-4
allele num: 116904
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*951+37G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1345+37G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1345+37G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1438+37G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1399+37G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-2910G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1339+37G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1381+37G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1084+37G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1399+37G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1345+37G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1345+37G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1438+37G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1339+37G>T
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6834
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7466
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7090
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5886
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1620
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ

10-11370847-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370847
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370847
    reference: chr 10
allele count: 1
allele frequency: 8.501377223110144e-6
allele num: 117628
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1439-42G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*952-42G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1346-42G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1346-42G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1346-42G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1340-42G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1085-42G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1400-42G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1340-42G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1439-42G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-42G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1400-42G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1346-42G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1382-42G>T
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5407
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2506
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3598
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

10-11370848-G-GCTTCCTCTCCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370848
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370859
    reference: chr 10
allele count: 1
allele frequency: 8.502967535669949e-6
allele num: 117606
alternate allele: GCTTCCTCTCCA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6901
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

10-11370852-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370852
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370852
    reference: chr 10
allele count: 1
allele frequency: 8.492713252029759e-6
allele num: 117748
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-37C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1340-37C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*952-37C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1085-37C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1382-37C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1400-37C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1400-37C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1346-37C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1439-37C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1340-37C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1346-37C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1439-37C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1346-37C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1346-37C>T
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7789
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5443
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

10-11370853-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370853
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370853
    reference: chr 10
allele count: 1
allele frequency: 8.491703605577351e-6
allele num: 117762
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1346-36C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1340-36C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1340-36C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1085-36C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-36C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1439-36C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*952-36C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1400-36C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1439-36C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1382-36C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1346-36C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1346-36C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1400-36C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1346-36C>G
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6906
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7790
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

10-11370855-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370855
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370855
    reference: chr 10
allele count: 1
allele frequency: 8.4870911343846e-6
allele num: 117826
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1439-34C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1400-34C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1085-34C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1346-34C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1340-34C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1382-34C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1439-34C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-34C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1346-34C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1346-34C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1340-34C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1400-34C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*952-34C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1346-34C>G
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5451
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6560
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP

10-11370860-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370860
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370860
    reference: chr 10
allele count: 1
allele frequency: 8.466826971924002e-6
allele num: 118108
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*952-29G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1400-29G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1346-29G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1340-29G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1439-29G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1346-29G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1340-29G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1346-29G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1400-29G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1346-29G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1085-29G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1382-29G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-29G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1439-29G>C
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6915
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7790
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

10-11370869-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370869
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370867
    reference: chr 10
allele count: 1
allele frequency: 8.425593583067927e-6
allele num: 118686
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1340-14_1340-13delTC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1085-14_1085-13delTC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1346-14_1346-13delTC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1340-14_1340-13delTC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1346-14_1346-13delTC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1346-14_1346-13delTC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1400-14_1400-13delTC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1382-14_1382-13delTC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-14_1196-13delTC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1346-14_1346-13delTC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1400-14_1400-13delTC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1439-14_1439-13delTC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*952-14_*952-13delTC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1439-14_1439-13delTC
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4497
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7790
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3798
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: CCT
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

10-11370872-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370872
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370872
    reference: chr 10
allele count: 8
allele frequency: 6.728569506122998e-5
allele num: 118896
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1346-17C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1085-17C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1400-17C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1439-17C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1382-17C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1346-17C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*952-17C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1346-17C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1439-17C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1340-17C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1346-17C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-17C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1340-17C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1400-17C>T
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6559
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7790
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5505
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

10-11370876-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370876
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370876
    reference: chr 10
allele count: 1
allele frequency: 8.393627557957998e-6
allele num: 119138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1346-13C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-13C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1346-13C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1400-13C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1340-13C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1400-13C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1340-13C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1439-13C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*952-13C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1382-13C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1439-13C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1346-13C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1085-13C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1346-13C>T
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4029
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7791
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

10-11370877-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370877
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370877
    reference: chr 10
allele count: 4
allele frequency: 3.352891869237217e-5
allele num: 119300
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-12G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1439-12G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1340-12G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1346-12G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1085-12G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1346-12G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1340-12G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1382-12G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*952-12G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1346-12G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1346-12G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1400-12G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1439-12G>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1400-12G>C
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4080
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 730
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6922
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7790
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

10-11370878-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370878
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370878
    reference: chr 10
allele count: 5
allele frequency: 4.187253998827569e-5
allele num: 119410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1346-11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1400-11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1439-11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1346-11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1346-11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1346-11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1340-11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*952-11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1382-11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1085-11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1439-11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1340-11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1400-11G>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1196-11G>T
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5178
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6562
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6922
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

10-11370905-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370905
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370905
    reference: chr 10
allele count: 1
allele frequency: 8.295588406085643e-6
allele num: 120546
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1212C>T
  hgvsp: ENST00000609692.1:c.1212C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1416C>T
  hgvsp: ENST00000416382.2:c.1416C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1362C>T
  hgvsp: ENST00000399850.3:c.1362C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1416C>T
  hgvsp: ENST00000379261.4:c.1416C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1362C>T
  hgvsp: ENST00000354440.2:c.1362C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1455C>T
  hgvsp: ENST00000542579.1:c.1455C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1455C>T
  hgvsp: ENST00000450189.1:c.1455C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1362C>T
  hgvsp: ENST00000427450.1:c.1362C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1356C>T
  hgvsp: ENST00000608830.1:c.1356C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1356C>T
  hgvsp: ENST00000417956.2:c.1356C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1398C>T
  hgvsp: ENST00000354897.3:c.1398C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1362C>T
  hgvsp: ENST00000315874.4:c.1362C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1101C>T
  hgvsp: ENST00000537122.1:c.1101C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*968C>T
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6926
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5606
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7793
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp485Asp
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

10-11370917-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370917
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370917
    reference: chr 10
allele count: 1
allele frequency: 8.286789200656313e-6
allele num: 120674
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1467T>C
  hgvsp: ENST00000542579.1:c.1467T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1428T>C
  hgvsp: ENST00000379261.4:c.1428T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1368T>C
  hgvsp: ENST00000417956.2:c.1368T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1467T>C
  hgvsp: ENST00000450189.1:c.1467T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1374T>C
  hgvsp: ENST00000399850.3:c.1374T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1428T>C
  hgvsp: ENST00000416382.2:c.1428T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1368T>C
  hgvsp: ENST00000608830.1:c.1368T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1410T>C
  hgvsp: ENST00000354897.3:c.1410T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1113T>C
  hgvsp: ENST00000537122.1:c.1113T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1224T>C
  hgvsp: ENST00000609692.1:c.1224T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1374T>C
  hgvsp: ENST00000315874.4:c.1374T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1374T>C
  hgvsp: ENST00000354440.2:c.1374T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1374T>C
  hgvsp: ENST00000427450.1:c.1374T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*980T>C
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4754
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6923
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser489Ser
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ

10-11370953-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370953
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370953
    reference: chr 10
allele count: 11
allele frequency: 9.111239956928684e-5
allele num: 120730
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1410G>A
  hgvsp: ENST00000315874.4:c.1410G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1503G>A
  hgvsp: ENST00000450189.1:c.1503G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1446G>A
  hgvsp: ENST00000354897.3:c.1446G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1464G>A
  hgvsp: ENST00000416382.2:c.1464G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1503G>A
  hgvsp: ENST00000542579.1:c.1503G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1410G>A
  hgvsp: ENST00000427450.1:c.1410G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1410G>A
  hgvsp: ENST00000399850.3:c.1410G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*1016G>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1260G>A
  hgvsp: ENST00000609692.1:c.1260G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1149G>A
  hgvsp: ENST00000537122.1:c.1149G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1404G>A
  hgvsp: ENST00000417956.2:c.1404G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1404G>A
  hgvsp: ENST00000608830.1:c.1404G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1410G>A
  hgvsp: ENST00000354440.2:c.1410G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1464G>A
  hgvsp: ENST00000379261.4:c.1464G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5833
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7789
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6925
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7826
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Gln501Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

10-11370981-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370981
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370981
    reference: chr 10
allele count: 1
allele frequency: 8.286102548805144e-6
allele num: 120684
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1438C>T
  hgvsp: ENST00000354440.2:c.1438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1438C>T
  hgvsp: ENST00000315874.4:c.1438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1177C>T
  hgvsp: ENST00000537122.1:c.1177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*1044C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1474C>T
  hgvsp: ENST00000354897.3:c.1474C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1438C>T
  hgvsp: ENST00000427450.1:c.1438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1531C>T
  hgvsp: ENST00000450189.1:c.1531C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1288C>T
  hgvsp: ENST00000609692.1:c.1288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1432C>T
  hgvsp: ENST00000417956.2:c.1432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1432C>T
  hgvsp: ENST00000608830.1:c.1432C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1438C>T
  hgvsp: ENST00000399850.3:c.1438C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1531C>T
  hgvsp: ENST00000542579.1:c.1531C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1492C>T
  hgvsp: ENST00000379261.4:c.1492C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1492C>T
  hgvsp: ENST00000416382.2:c.1492C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7791
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu511Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

10-11370992-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370992
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370992
    reference: chr 10
allele count: 1
allele frequency: 8.291598951941893e-6
allele num: 120604
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1485C>G
  hgvsp: ENST00000354897.3:c.1485C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1542C>G
  hgvsp: ENST00000450189.1:c.1542C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*1055C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1443C>G
  hgvsp: ENST00000417956.2:c.1443C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1443C>G
  hgvsp: ENST00000608830.1:c.1443C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1503C>G
  hgvsp: ENST00000379261.4:c.1503C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1449C>G
  hgvsp: ENST00000427450.1:c.1449C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1449C>G
  hgvsp: ENST00000399850.3:c.1449C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1299C>G
  hgvsp: ENST00000609692.1:c.1299C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1449C>G
  hgvsp: ENST00000354440.2:c.1449C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1449C>G
  hgvsp: ENST00000315874.4:c.1449C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1503C>G
  hgvsp: ENST00000416382.2:c.1503C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1188C>G
  hgvsp: ENST00000537122.1:c.1188C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1542C>G
  hgvsp: ENST00000542579.1:c.1542C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5618
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6929
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser514Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD

10-11370998-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11370998
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11370998
    reference: chr 10
allele count: 2
allele frequency: 1.659475605708596e-5
allele num: 120520
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*1061C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1455C>T
  hgvsp: ENST00000399850.3:c.1455C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1455C>T
  hgvsp: ENST00000315874.4:c.1455C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1548C>T
  hgvsp: ENST00000450189.1:c.1548C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1455C>T
  hgvsp: ENST00000354440.2:c.1455C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1449C>T
  hgvsp: ENST00000608830.1:c.1449C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1491C>T
  hgvsp: ENST00000354897.3:c.1491C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1449C>T
  hgvsp: ENST00000417956.2:c.1449C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1509C>T
  hgvsp: ENST00000416382.2:c.1509C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1455C>T
  hgvsp: ENST00000427450.1:c.1455C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1548C>T
  hgvsp: ENST00000542579.1:c.1548C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1305C>T
  hgvsp: ENST00000609692.1:c.1305C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1509C>T
  hgvsp: ENST00000379261.4:c.1509C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1194C>T
  hgvsp: ENST00000537122.1:c.1194C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7791
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asn516Asn
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-11371013-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11371013
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11371013
    reference: chr 10
allele count: 1
allele frequency: 8.331389342486753e-6
allele num: 120028
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.1464C>T
  hgvsp: ENST00000608830.1:c.1464C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.1464C>T
  hgvsp: ENST00000417956.2:c.1464C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.1470C>T
  hgvsp: ENST00000315874.4:c.1470C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.1524C>T
  hgvsp: ENST00000379261.4:c.1524C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*1076C>T
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.1470C>T
  hgvsp: ENST00000354440.2:c.1470C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.1470C>T
  hgvsp: ENST00000427450.1:c.1470C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.1524C>T
  hgvsp: ENST00000416382.2:c.1524C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.1563C>T
  hgvsp: ENST00000450189.1:c.1563C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.1320C>T
  hgvsp: ENST00000609692.1:c.1320C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.1506C>T
  hgvsp: ENST00000354897.3:c.1506C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.1209C>T
  hgvsp: ENST00000537122.1:c.1209C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.1470C>T
  hgvsp: ENST00000399850.3:c.1470C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.1563C>T
  hgvsp: ENST00000542579.1:c.1563C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6566
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7790
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr521Tyr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/10-11371018-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11371018
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11371018
    reference: chr 10
allele count: 7
allele frequency: 5.842193994224574e-5
allele num: 119818
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*1081C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.*2C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.*2C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.*2C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.*2C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.*2C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.*2C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.*2C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.*2C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.*2C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.*2C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.*2C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.*2C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.*2C>A
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6567
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4519
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ

10-11371019-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11371019
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11371019
    reference: chr 10
allele count: 4
allele frequency: 3.34001336005344e-5
allele num: 119760
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.*3C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.*3C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.*3C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*1082C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.*3C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.*3C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.*3C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.*3C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.*3C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.*3C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.*3C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.*3C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.*3C>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.*3C>G
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5594
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1027
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7790
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4515
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

http://identifiers.org/exac.variant/10-11371023-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11371023
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11371023
    reference: chr 10
allele count: 1
allele frequency: 8.361903169161301e-6
allele num: 119590
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.*7C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.*7C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.*7C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.*7C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.*7C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.*7C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.*7C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*1086C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.*7C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.*7C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.*7C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.*7C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.*7C>A
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.*7C>A
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5579
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7827
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6930
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5176
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7788
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

10-11371033-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11371033
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11371032
    reference: chr 10
allele count: 8
allele frequency: 6.719865602687946e-5
allele num: 119050
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.*20delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.*20delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.*20delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.*20delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.*20delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.*20delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.*20delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.*20delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*1099delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.*20delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.*20delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.*20delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.*20delC
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.*20delC
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6923
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5511
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: TC
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

10-11371044-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11371044
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11371044
    reference: chr 10
allele count: 1
allele frequency: 8.429428821903027e-6
allele num: 118632
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.*28A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.*28A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.*28A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.*28A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.*28A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.*28A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.*28A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.*28A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*1107A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.*28A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.*28A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.*28A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.*28A>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.*28A>G
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6921
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

10-11371046-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11371046
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11371046
    reference: chr 10
allele count: 1
allele frequency: 8.438391305081599e-6
allele num: 118506
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.*30T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.*30T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*1109T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.*30T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.*30T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.*30T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.*30T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.*30T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.*30T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.*30T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.*30T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.*30T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.*30T>C
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.*30T>C
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6914
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5424
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

10-11371049-A-AGCTTTCTTAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11371049
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11371059
    reference: chr 10
allele count: 1
allele frequency: 8.449085808915476e-6
allele num: 118356
alternate allele: AGCTTTCTTAG
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: 3' UTR
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6899
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6565
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2956
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7819
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

10-11371054-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11371054
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11371054
    reference: chr 10
allele count: 1
allele frequency: 8.466970348669839e-6
allele num: 118106
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.*38T>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.*38T>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.*38T>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.*38T>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.*38T>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.*38T>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*1117T>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000438884
  ensembl transcript: ENST00000537122
  gene symbol: CELF2
  hgvsc: ENST00000537122.1:c.*38T>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.*38T>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.*38T>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.*38T>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.*38T>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.*38T>G
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.*38T>G
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5177
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2991
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7815
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

10-11371060-G-GGTAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11371060
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11371064
    reference: chr 10
allele count: 1
allele frequency: 8.504124500382685e-6
allele num: 117590
alternate allele: GGTAA
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000443926
  ensembl transcript: ENST00000542579
  gene symbol: CELF2
  hgvsc: ENST00000542579.1:c.*44+3_*44+6dupAAGT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000315328
  ensembl transcript: ENST00000315874
  gene symbol: CELF2
  hgvsc: ENST00000315874.4:c.*44+3_*44+6dupAAGT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476392
  ensembl transcript: ENST00000609870
  gene symbol: CELF2
  hgvsc: ENST00000609870.1:c.*1126_*1129dupAAGT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000368563
  ensembl transcript: ENST00000379261
  gene symbol: CELF2
  hgvsc: ENST00000379261.4:c.*47_*50dupAAGT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000388530
  ensembl transcript: ENST00000427450
  gene symbol: CELF2
  hgvsc: ENST00000427450.1:c.*44+3_*44+6dupAAGT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476656
  ensembl transcript: ENST00000609692
  gene symbol: CELF2
  hgvsc: ENST00000609692.1:c.*44+3_*44+6dupAAGT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000389951
  ensembl transcript: ENST00000450189
  gene symbol: CELF2
  hgvsc: ENST00000450189.1:c.*44+3_*44+6dupAAGT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346426
  ensembl transcript: ENST00000354440
  gene symbol: CELF2
  hgvsc: ENST00000354440.2:c.*47_*50dupAAGT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000406451
  ensembl transcript: ENST00000416382
  gene symbol: CELF2
  hgvsc: ENST00000416382.2:c.*44+3_*44+6dupAAGT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000476999
  ensembl transcript: ENST00000608830
  gene symbol: CELF2
  hgvsc: ENST00000608830.1:c.*44+3_*44+6dupAAGT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000382743
  ensembl transcript: ENST00000399850
  gene symbol: CELF2
  hgvsc: ENST00000399850.3:c.*44+3_*44+6dupAAGT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000346971
  ensembl transcript: ENST00000354897
  gene symbol: CELF2
  hgvsc: ENST00000354897.3:c.*47_*50dupAAGT
  variant of: http://identifiers.org/hgnc/2550
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000048740
  ensembl protein: ENSP00000404834
  ensembl transcript: ENST00000417956
  gene symbol: CELF2
  hgvsc: ENST00000417956.2:c.*44+3_*44+6dupAAGT
  variant of: http://identifiers.org/hgnc/2550
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5056
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6754
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5174
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2067
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2857
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3605
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3086
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7775
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7776
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.*44+3_*44+6dupAAGT
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

10-11504390-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11504390
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11504390
    reference: chr 10
allele count: 1
allele frequency: 9.294716882923746e-6
allele num: 107588
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000368539
  ensembl transcript: ENST00000379237
  gene symbol: USP6NL
  hgvsc: ENST00000379237.2:c.*50C>G
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000476462
  ensembl transcript: ENST00000609104
  gene symbol: USP6NL
  hgvsc: ENST00000609104.1:c.*50C>G
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000277575
  ensembl transcript: ENST00000277575
  gene symbol: USP6NL
  hgvsc: ENST00000277575.5:c.*50C>G
  variant of: http://identifiers.org/hgnc/16858
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5567
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14269
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11898
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1444
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2725
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5507
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5499
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4936
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4247
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4368
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4794
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2975
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13670
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

10-11504391-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11504391
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11504391
    reference: chr 10
allele count: 1
allele frequency: 9.27265309150254e-6
allele num: 107844
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000277575
  ensembl transcript: ENST00000277575
  gene symbol: USP6NL
  hgvsc: ENST00000277575.5:c.*49A>G
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000476462
  ensembl transcript: ENST00000609104
  gene symbol: USP6NL
  hgvsc: ENST00000609104.1:c.*49A>G
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000368539
  ensembl transcript: ENST00000379237
  gene symbol: USP6NL
  hgvsc: ENST00000379237.2:c.*49A>G
  variant of: http://identifiers.org/hgnc/16858
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5559
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13747
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13163
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9002
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11902
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3208
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5516
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4405
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5527
  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2978
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2714
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum

10-11504398-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11504398
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11504398
    reference: chr 10
allele count: 1
allele frequency: 9.248298313110388e-6
allele num: 108128
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000277575
  ensembl transcript: ENST00000277575
  gene symbol: USP6NL
  hgvsc: ENST00000277575.5:c.*42G>A
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000368539
  ensembl transcript: ENST00000379237
  gene symbol: USP6NL
  hgvsc: ENST00000379237.2:c.*42G>A
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000476462
  ensembl transcript: ENST00000609104
  gene symbol: USP6NL
  hgvsc: ENST00000609104.1:c.*42G>A
  variant of: http://identifiers.org/hgnc/16858
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 4835
  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2536
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD

10-11504400-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11504400
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11504400
    reference: chr 10
allele count: 2
allele frequency: 1.847404396822464e-5
allele num: 108260
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000277575
  ensembl transcript: ENST00000277575
  gene symbol: USP6NL
  hgvsc: ENST00000277575.5:c.*40G>A
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000476462
  ensembl transcript: ENST00000609104
  gene symbol: USP6NL
  hgvsc: ENST00000609104.1:c.*40G>A
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000368539
  ensembl transcript: ENST00000379237
  gene symbol: USP6NL
  hgvsc: ENST00000379237.2:c.*40G>A
  variant of: http://identifiers.org/hgnc/16858
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 21013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5434
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum

10-11504401-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11504401
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11504401
    reference: chr 10
allele count: 1
allele frequency: 9.216419973825367e-6
allele num: 108502
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000368539
  ensembl transcript: ENST00000379237
  gene symbol: USP6NL
  hgvsc: ENST00000379237.2:c.*39C>G
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000277575
  ensembl transcript: ENST00000277575
  gene symbol: USP6NL
  hgvsc: ENST00000277575.5:c.*39C>G
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000476462
  ensembl transcript: ENST00000609104
  gene symbol: USP6NL
  hgvsc: ENST00000609104.1:c.*39C>G
  variant of: http://identifiers.org/hgnc/16858
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 481
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  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

10-11504406-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11504406
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11504406
    reference: chr 10
allele count: 2
allele frequency: 1.827819411442149e-5
allele num: 109420
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000476462
  ensembl transcript: ENST00000609104
  gene symbol: USP6NL
  hgvsc: ENST00000609104.1:c.*34A>G
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000277575
  ensembl transcript: ENST00000277575
  gene symbol: USP6NL
  hgvsc: ENST00000277575.5:c.*34A>G
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000368539
  ensembl transcript: ENST00000379237
  gene symbol: USP6NL
  hgvsc: ENST00000379237.2:c.*34A>G
  variant of: http://identifiers.org/hgnc/16858
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5292
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5331
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2851
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30299
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2196
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

10-11504406-TTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11504406
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11504404
    reference: chr 10
allele count: 1
allele frequency: 9.139097057210747e-6
allele num: 109420
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000368539
  ensembl transcript: ENST00000379237
  gene symbol: USP6NL
  hgvsc: ENST00000379237.2:c.*32_*33delGA
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000277575
  ensembl transcript: ENST00000277575
  gene symbol: USP6NL
  hgvsc: ENST00000277575.5:c.*32_*33delGA
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000476462
  ensembl transcript: ENST00000609104
  gene symbol: USP6NL
  hgvsc: ENST00000609104.1:c.*32_*33delGA
  variant of: http://identifiers.org/hgnc/16858
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30299
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2851
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5331
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5179
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1586
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2202
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3679
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2196
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 431
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: TTC
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

10-11504410-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11504410
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11504410
    reference: chr 10
allele count: 1
allele frequency: 9.084797499863727e-6
allele num: 110074
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000277575
  ensembl transcript: ENST00000277575
  gene symbol: USP6NL
  hgvsc: ENST00000277575.5:c.*30G>C
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000368539
  ensembl transcript: ENST00000379237
  gene symbol: USP6NL
  hgvsc: ENST00000379237.2:c.*30G>C
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000476462
  ensembl transcript: ENST00000609104
  gene symbol: USP6NL
  hgvsc: ENST00000609104.1:c.*30G>C
  variant of: http://identifiers.org/hgnc/16858
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4993
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6474
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2048
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1902
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33233
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 962
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2917
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5062
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1619
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5336
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

10-11504415-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11504415
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11504415
    reference: chr 10
allele count: 3
allele frequency: 2.68211565282695e-5
allele num: 111852
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000368539
  ensembl transcript: ENST00000379237
  gene symbol: USP6NL
  hgvsc: ENST00000379237.2:c.*25C>T
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000476462
  ensembl transcript: ENST00000609104
  gene symbol: USP6NL
  hgvsc: ENST00000609104.1:c.*25C>T
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000277575
  ensembl transcript: ENST00000277575
  gene symbol: USP6NL
  hgvsc: ENST00000277575.5:c.*25C>T
  variant of: http://identifiers.org/hgnc/16858
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31860
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12151
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3891
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4381
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36909
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1827
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5652
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2202
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

10-11504417-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11504417
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11504417
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 112818
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000277575
  ensembl transcript: ENST00000277575
  gene symbol: USP6NL
  hgvsc: ENST00000277575.5:c.*23G>C
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000476462
  ensembl transcript: ENST00000609104
  gene symbol: USP6NL
  hgvsc: ENST00000609104.1:c.*23G>C
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000368539
  ensembl transcript: ENST00000379237
  gene symbol: USP6NL
  hgvsc: ENST00000379237.2:c.*23G>C
  variant of: http://identifiers.org/hgnc/16858
canonical: true
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3923
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3077
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1076
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2205
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 789
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

10-11504422-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11504422
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11504422
    reference: chr 10
allele count: 1
allele frequency: 8.734387282732117e-6
allele num: 114490
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000277575
  ensembl transcript: ENST00000277575
  gene symbol: USP6NL
  hgvsc: ENST00000277575.5:c.*18C>G
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000476462
  ensembl transcript: ENST00000609104
  gene symbol: USP6NL
  hgvsc: ENST00000609104.1:c.*18C>G
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000368539
  ensembl transcript: ENST00000379237
  gene symbol: USP6NL
  hgvsc: ENST00000379237.2:c.*18C>G
  variant of: http://identifiers.org/hgnc/16858
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34795
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40171
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5940
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2214
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3116
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1811
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1772
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

10-11504429-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11504429
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11504429
    reference: chr 10
allele count: 1
allele frequency: 8.584870025067821e-6
allele num: 116484
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000368539
  ensembl transcript: ENST00000379237
  gene symbol: USP6NL
  hgvsc: ENST00000379237.2:c.*11G>A
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000476462
  ensembl transcript: ENST00000609104
  gene symbol: USP6NL
  hgvsc: ENST00000609104.1:c.*11G>A
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000277575
  ensembl transcript: ENST00000277575
  gene symbol: USP6NL
  hgvsc: ENST00000277575.5:c.*11G>A
  variant of: http://identifiers.org/hgnc/16858
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13613
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2223
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1857
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1907
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41705
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6166
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/10-11504431-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11504431
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11504431
    reference: chr 10
allele count: 1
allele frequency: 8.548323673727582e-6
allele num: 116982
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000277575
  ensembl transcript: ENST00000277575
  gene symbol: USP6NL
  hgvsc: ENST00000277575.5:c.*9G>T
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000476462
  ensembl transcript: ENST00000609104
  gene symbol: USP6NL
  hgvsc: ENST00000609104.1:c.*9G>T
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000368539
  ensembl transcript: ENST00000379237
  gene symbol: USP6NL
  hgvsc: ENST00000379237.2:c.*9G>T
  variant of: http://identifiers.org/hgnc/16858
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35936
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1866
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1938
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6222
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42038
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1934
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2227
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

10-11504431-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11504431
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11504431
    reference: chr 10
allele count: 6
allele frequency: 5.128994204236549e-5
allele num: 116982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000368539
  ensembl transcript: ENST00000379237
  gene symbol: USP6NL
  hgvsc: ENST00000379237.2:c.*9G>A
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000277575
  ensembl transcript: ENST00000277575
  gene symbol: USP6NL
  hgvsc: ENST00000277575.5:c.*9G>A
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000476462
  ensembl transcript: ENST00000609104
  gene symbol: USP6NL
  hgvsc: ENST00000609104.1:c.*9G>A
  variant of: http://identifiers.org/hgnc/16858
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35936
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1806
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1938
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42038
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1934
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1866
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2227
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6222
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

10-11504432-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11504432
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11504432
    reference: chr 10
allele count: 2
allele frequency: 1.703983914391848e-5
allele num: 117372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000476462
  ensembl transcript: ENST00000609104
  gene symbol: USP6NL
  hgvsc: ENST00000609104.1:c.*8C>T
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000277575
  ensembl transcript: ENST00000277575
  gene symbol: USP6NL
  hgvsc: ENST00000277575.5:c.*8C>T
  variant of: http://identifiers.org/hgnc/16858
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000368539
  ensembl transcript: ENST00000379237
  gene symbol: USP6NL
  hgvsc: ENST00000379237.2:c.*8C>T
  variant of: http://identifiers.org/hgnc/16858
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36063
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1142
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1892
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2232
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6277
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1767
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1960
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ

10-11504438-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 11504438
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 11504438
    reference: chr 10
allele count: 1
allele frequency: 8.447658309116713e-6
allele num: 118376
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148429
  ensembl protein: ENSP00000368539
  ensembl transcript: ENST00000379237
  gene symbol: USP6NL
  hgvsc: ENST00000379237.2:c.*2A>G
  variant of: http://identifiers.org/hgnc/16858
canonical: true
consequence: 3' UTR
filter: PASS
num of homozygotes: 0
reference allele: T

GenotypeDepth
all individuals: 6
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15274
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 16
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5076
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3007
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5509
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11530
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3081
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1894
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3123
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6874
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2294
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8489
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1608
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4351
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.659563132658497e-5
allele num: 15016
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6842
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52166
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8918
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4792
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.43754e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.763e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.44e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.935999999999999e-1

GenotypeDepth
all individuals: 1
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 222
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6901
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4285
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1924
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4503
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3573
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10333
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3005
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8470
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1532
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2944
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3165
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5451
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4738
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6756
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.153934918070621e-4
allele num: 8666
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14882
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.84e-1

QD
type: SiteQuality
SIO_000300: 6.85e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.39e0

MQRankSum
type: SiteQuality
SIO_000300: -5.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.699999999999999e-3

DP
type: SiteQuality
SIO_000300: 9.42617e5

GenotypeDepth
all individuals: 670
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 322
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1326
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 513
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11088
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2001
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19726
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1873
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1641
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1361
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1724
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6518
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4535
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3466
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2461
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8376
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1260
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2556
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1232
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9678
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65136
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.510802235987309e-4
allele num: 13238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

FS
type: SiteQuality
SIO_000300: 4.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.17e0

MQRankSum
type: SiteQuality
SIO_000300: 8.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-1

QD
type: SiteQuality
SIO_000300: 1.449e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.87028e6

VQSLOD
type: SiteQuality
SIO_000300: 7.09e-1

GenotypeDepth
all individuals: 11832
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 800
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 327
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 830
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1080
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9903
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1758
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8400
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 240
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1787
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8381
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3459
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2351
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2037
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1273
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16026
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2382
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5897
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2596
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9658
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.078912528095077e-5
allele num: 64958
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.038e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

DP
type: SiteQuality
SIO_000300: 1.951447e6

FS
type: SiteQuality
SIO_000300: 5.406e0

MQRankSum
type: SiteQuality
SIO_000300: 1.72e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.75e-1

QD
type: SiteQuality
SIO_000300: 1.624e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 2692
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1402
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1956
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 986
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9852
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1140
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2618
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3426
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11959
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5065
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1765
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4527
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2181
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4931
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2545
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1227
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1297
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8404
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2430
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.739190928380118e-5
allele num: 57498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6058
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12962
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10090
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.800000000000001e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.62e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.493e0

DP
type: SiteQuality
SIO_000300: 2.111189e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.63e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.8e-2

QD
type: SiteQuality
SIO_000300: 2.909e1

MQ
type: SiteQuality
SIO_000300: 6.022e1

GenotypeDepth
all individuals: 3952
bin: 5.25e1
variant carriers: 7

GenotypeDepth
all individuals: 623
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 757
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2211
bin: 9.75e1
variant carriers: 4

GenotypeDepth
all individuals: 7819
bin: 3.25e1
variant carriers: 15

GenotypeQuality
all individuals: 38943
bin: 9.75e1
variant carriers: 76

GenotypeQuality
all individuals: 685
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 316
bin: 7.5e0
variant carriers: 5

GenotypeQuality
all individuals: 1262
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2100
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1746
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1445
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1057
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 656
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 1.75e1
variant carriers: 4

GenotypeQuality
all individuals: 640
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 4414
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 679
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1371
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1106
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 46
allele frequency: 7.127583749109052e-4
allele num: 64538
num of homozygotes: 1

African
type: Population
allele count: 1
allele frequency: 1.037129226301597e-4
allele num: 9642
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.118344866544273e-4
allele num: 14162
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11176
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 32
allele frequency: 4.948963810702135e-3
allele num: 6466
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.331002331002331e-3
allele num: 858
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.4e-3

DP
type: SiteQuality
SIO_000300: 2.548926e6

QD
type: SiteQuality
SIO_000300: 1.661e1

MQ
type: SiteQuality
SIO_000300: 6.01e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

GenotypeDepth
all individuals: 393
bin: 9.25e1
variant carriers: 329

GenotypeDepth
all individuals: 2211
bin: 9.75e1
variant carriers: 1960

GenotypeDepth
all individuals: 1804
bin: 6.25e1
variant carriers: 1453

GenotypeDepth
all individuals: 623
bin: 8.25e1
variant carriers: 512

GenotypeDepth
all individuals: 757
bin: 7.75e1
variant carriers: 613

GenotypeDepth
all individuals: 1331
bin: 6.75e1
variant carriers: 1064

GenotypeQuality
all individuals: 640
bin: 4.25e1
variant carriers: 154

GenotypeQuality
all individuals: 1057
bin: 2.5e0
variant carriers: 26

GenotypeQuality
all individuals: 2100
bin: 6.75e1
variant carriers: 222

GenotypeQuality
all individuals: 755
bin: 3.25e1
variant carriers: 93

GenotypeQuality
all individuals: 392
bin: 1.25e1
variant carriers: 44

GenotypeQuality
all individuals: 1006
bin: 2.25e1
variant carriers: 46

GenotypeQuality
all individuals: 4414
bin: 6.25e1
variant carriers: 249

GenotypeQuality
all individuals: 1746
bin: 7.75e1
variant carriers: 325

GenotypeQuality
all individuals: 656
bin: 5.25e1
variant carriers: 165

GenotypeQuality
all individuals: 316
bin: 7.5e0
variant carriers: 33

GenotypeQuality
all individuals: 413
bin: 1.75e1
variant carriers: 60

GenotypeQuality
all individuals: 685
bin: 2.75e1
variant carriers: 68

GenotypeQuality
all individuals: 1262
bin: 9.25e1
variant carriers: 432

GenotypeQuality
all individuals: 38943
bin: 9.75e1
variant carriers: 34724

GenotypeQuality
all individuals: 1445
bin: 8.25e1
variant carriers: 282

GenotypeQuality
all individuals: 642
bin: 3.75e1
variant carriers: 76

GenotypeQuality
all individuals: 1106
bin: 8.75e1
variant carriers: 434

GenotypeQuality
all individuals: 1371
bin: 7.25e1
variant carriers: 295

GenotypeQuality
all individuals: 679
bin: 4.75e1
variant carriers: 166

GenotypeQuality
all individuals: 764
bin: 5.75e1
variant carriers: 257

African
type: Population
allele count: 4540
allele frequency: 4.708566687409251e-1
allele num: 9642
num of homozygotes: 1039

Other
type: Population
allele count: 381
allele frequency: 4.440559440559441e-1
allele num: 858
num of homozygotes: 90

European (Finnish)
type: Population
allele count: 2337
allele frequency: 3.614290133003402e-1
allele num: 6466
num of homozygotes: 394

East Asian
type: Population
allele count: 3404
allele frequency: 4.092329886992065e-1
allele num: 8318
num of homozygotes: 684

European (Non-Finnish)
type: Population
allele count: 27641
allele frequency: 4.282903095850507e-1
allele num: 64538
num of homozygotes: 5817

Latino
type: Population
allele count: 4734
allele frequency: 4.235862562634216e-1
allele num: 11176
num of homozygotes: 977

South Asian
type: Population
allele count: 4487
allele frequency: 3.168337805394718e-1
allele num: 14162
num of homozygotes: 653

MQ
type: SiteQuality
SIO_000300: 6.01e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

QD
type: SiteQuality
SIO_000300: 1.661e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.26e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.548926e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.5e-2

GenotypeDepth
all individuals: 63
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 559
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variant carriers: 0

GenotypeDepth
all individuals: 347
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variant carriers: 0

GenotypeDepth
all individuals: 3571
bin: 3.25e1
variant carriers: 2

GenotypeDepth
all individuals: 271
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variant carriers: 0

GenotypeDepth
all individuals: 1120
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variant carriers: 1

GenotypeQuality
all individuals: 204
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variant carriers: 0

GenotypeQuality
all individuals: 693
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variant carriers: 0

GenotypeQuality
all individuals: 294
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variant carriers: 0

GenotypeQuality
all individuals: 1053
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variant carriers: 0

GenotypeQuality
all individuals: 1189
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variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4438
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variant carriers: 0

GenotypeQuality
all individuals: 838
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variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2019
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variant carriers: 0

GenotypeQuality
all individuals: 4204
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 543
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1462
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variant carriers: 0

GenotypeQuality
all individuals: 465
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variant carriers: 0

GenotypeQuality
all individuals: 685
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variant carriers: 0

GenotypeQuality
all individuals: 648
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variant carriers: 0

GenotypeQuality
all individuals: 327
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variant carriers: 0

GenotypeQuality
all individuals: 1115
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variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3700
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6672
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 6.224861137713081e-4
allele num: 20884
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 7.501875468867217e-4
allele num: 2666
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.800000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.9e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.217e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.4e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.37e-1

DP
type: SiteQuality
SIO_000300: 7.45385e5

MQ
type: SiteQuality
SIO_000300: 5.986e1

GenotypeDepth
all individuals: 2217
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 572
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5868
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1987
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variant carriers: 1

GenotypeDepth
all individuals: 1536
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variant carriers: 0

GenotypeDepth
all individuals: 1005
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variant carriers: 0

GenotypeQuality
all individuals: 835
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variant carriers: 0

GenotypeQuality
all individuals: 3891
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variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
all individuals: 3409
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variant carriers: 0

GenotypeQuality
all individuals: 3439
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variant carriers: 0

GenotypeQuality
all individuals: 200
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variant carriers: 0

GenotypeQuality
all individuals: 2427
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variant carriers: 0

GenotypeQuality
all individuals: 299
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variant carriers: 0

GenotypeQuality
all individuals: 494
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variant carriers: 0

GenotypeQuality
all individuals: 514
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variant carriers: 0

GenotypeQuality
all individuals: 36
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variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 376
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 3171
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variant carriers: 0

GenotypeQuality
all individuals: 605
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variant carriers: 0

GenotypeQuality
all individuals: 30495
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 581
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7447
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2104
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.204674135646308e-4
allele num: 66408
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 2.589126e6

FS
type: SiteQuality
SIO_000300: 1.416e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.55e-1

QD
type: SiteQuality
SIO_000300: 1.387e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

MQ
type: SiteQuality
SIO_000300: 5.99e1

MQRankSum
type: SiteQuality
SIO_000300: -3.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

GenotypeDepth
all individuals: 5870
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 455
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1989
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6925
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6808
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 762
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variant carriers: 0

GenotypeDepth
all individuals: 1534
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variant carriers: 0

GenotypeDepth
all individuals: 3379
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variant carriers: 0

GenotypeDepth
all individuals: 574
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 8831
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variant carriers: 0

GenotypeQuality
all individuals: 3935
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3436
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 396
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 133
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variant carriers: 0

GenotypeQuality
all individuals: 30483
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variant carriers: 1

GenotypeQuality
all individuals: 268
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variant carriers: 0

GenotypeQuality
all individuals: 24
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GenotypeQuality
all individuals: 384
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GenotypeQuality
all individuals: 94
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GenotypeQuality
all individuals: 3439
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GenotypeQuality
all individuals: 593
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GenotypeQuality
all individuals: 2130
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GenotypeQuality
all individuals: 218
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GenotypeQuality
all individuals: 380
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variant carriers: 0

GenotypeQuality
all individuals: 2408
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variant carriers: 0

GenotypeQuality
all individuals: 3204
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503985561738607e-5
allele num: 66490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.18e-1

MQ
type: SiteQuality
SIO_000300: 6.016e1

VQSLOD
type: SiteQuality
SIO_000300: 5.88e-1

DP
type: SiteQuality
SIO_000300: 2.600433e6

MQRankSum
type: SiteQuality
SIO_000300: 1.82e-1

QD
type: SiteQuality
SIO_000300: 1.199e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.54e-1

FS
type: SiteQuality
SIO_000300: 3.873e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.593e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.99e-2

GenotypeDepth
all individuals: 7435
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2221
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 436
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GenotypeDepth
all individuals: 3379
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7445
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4463
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GenotypeDepth
all individuals: 1989
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variant carriers: 0

GenotypeDepth
all individuals: 1006
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 405
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variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2131
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variant carriers: 0

GenotypeQuality
all individuals: 75
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GenotypeQuality
all individuals: 20
bin: 1.75e1
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GenotypeQuality
all individuals: 3206
bin: 9.25e1
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GenotypeQuality
all individuals: 565
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GenotypeQuality
all individuals: 3437
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variant carriers: 0

GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 364
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GenotypeQuality
all individuals: 133
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GenotypeQuality
all individuals: 195
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variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 28
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GenotypeQuality
all individuals: 9006
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3932
bin: 6.75e1
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GenotypeQuality
all individuals: 30487
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2411
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3445
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503714174009804e-5
allele num: 66502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.573e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.87e-2

VQSLOD
type: SiteQuality
SIO_000300: 8.090000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-2

QD
type: SiteQuality
SIO_000300: 1.296e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.198e0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

DP
type: SiteQuality
SIO_000300: 2.602259e6

GenotypeDepth
all individuals: 6823
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1536
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1989
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variant carriers: 0

GenotypeDepth
all individuals: 4460
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GenotypeDepth
all individuals: 7063
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variant carriers: 0

GenotypeDepth
all individuals: 762
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variant carriers: 0

GenotypeDepth
all individuals: 405
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variant carriers: 0

GenotypeDepth
all individuals: 455
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1008
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 131
bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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DP
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FS
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BaseQRankSum
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ReadPosRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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QD
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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African
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South Asian
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MQRankSum
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ClippingRankSum
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QD
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MQ
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InbreedingCoeff
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BaseQRankSum
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FS
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ReadPosRankSum
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

Other
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East Asian
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European (Finnish)
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MQRankSum
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FS
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MQ
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DP
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ReadPosRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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East Asian
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Latino
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African
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European (Finnish)
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FS
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MQ
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BaseQRankSum
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QD
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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African
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South Asian
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East Asian
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European (Finnish)
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VQSLOD
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ClippingRankSum
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FS
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ReadPosRankSum
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MQ
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DP
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QD
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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Latino
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South Asian
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European (Finnish)
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Other
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ClippingRankSum
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MQ
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MQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.510802235987309e-5
allele num: 66190
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.882e1

MQRankSum
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SIO_000300: 5.95e-1

ReadPosRankSum
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QD
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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FS
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DP
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SIO_000300: 2.586593e6

InbreedingCoeff
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SIO_000300: 8.800000000000001e-3

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9772
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.534187775829756e-5
allele num: 66164
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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MQRankSum
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SIO_000300: 1.57e-1

ClippingRankSum
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ReadPosRankSum
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FS
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SIO_000300: 8.957000000000001e0

InbreedingCoeff
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BaseQRankSum
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SIO_000300: -2.911e0

DP
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QD
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MQ
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SIO_000300: 5.931e1

VQSLOD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.512035805007863e-5
allele num: 66136
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-1

MQ
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InbreedingCoeff
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FS
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -1.739e0

ReadPosRankSum
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SIO_000300: 1.6e0

DP
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SIO_000300: 2.580041e6

VQSLOD
type: SiteQuality
SIO_000300: 8.06e-1

QD
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SIO_000300: 1.245e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.512767759893501e-5
allele num: 66104
num of homozygotes: 0

VQSLOD
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BaseQRankSum
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ClippingRankSum
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MQ
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DP
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FS
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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SIO_000300: 1.124e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.515105602860519e-5
allele num: 66002
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

Other
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South Asian
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MQ
type: SiteQuality
SIO_000300: 5.934e1

BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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FS
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QD
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DP
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MQRankSum
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GenotypeDepth
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bin: 4.25e1
variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518418415378542e-5
allele num: 65858
num of homozygotes: 0

African
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num of homozygotes: 0

East Asian
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European (Finnish)
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num of homozygotes: 0

Latino
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South Asian
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Other
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MQ
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BaseQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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MQRankSum
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FS
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VQSLOD
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DP
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.518879674352198e-5
allele num: 65838
num of homozygotes: 0

Latino
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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MQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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MQ
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QD
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FS
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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African
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South Asian
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Latino
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BaseQRankSum
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MQRankSum
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QD
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InbreedingCoeff
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FS
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Latino
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South Asian
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European (Finnish)
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VQSLOD
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MQRankSum
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ReadPosRankSum
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MQ
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DP
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FS
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QD
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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East Asian
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European (Finnish)
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Latino
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MQ
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FS
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MQRankSum
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VQSLOD
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DP
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InbreedingCoeff
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BaseQRankSum
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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African
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East Asian
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FS
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ReadPosRankSum
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MQ
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VQSLOD
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DP
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African
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East Asian
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InbreedingCoeff
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FS
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DP
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MQ
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VQSLOD
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East Asian
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VQSLOD
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FS
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QD
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9658
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.518233990222573e-5
allele num: 65866
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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SIO_000300: -1.014e0

BaseQRankSum
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VQSLOD
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ReadPosRankSum
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FS
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DP
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MQRankSum
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MQ
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QD
type: SiteQuality
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66080
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9714
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15206
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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FS
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QD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
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ReadPosRankSum
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SIO_000300: -7.8e-1

DP
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SIO_000300: 2.68735e6

InbreedingCoeff
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SIO_000300: 1.9e-3

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 8
allele frequency: 5.211047420531526e-4
allele num: 15352
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66128
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.68e0

MQ
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MQRankSum
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BaseQRankSum
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QD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 1.5e-3

ClippingRankSum
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SIO_000300: -4.49e-1

ReadPosRankSum
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SIO_000300: 1.07e0

DP
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SIO_000300: 2.691126e6

VQSLOD
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SIO_000300: 1.02e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 256
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15486
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66218
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.63e-1

QD
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FS
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DP
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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SIO_000300: 5.941e1

ClippingRankSum
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SIO_000300: 6.0e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.525569467491326e-5
allele num: 66290
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
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allele num: 9754
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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QD
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DP
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66328
num of homozygotes: 0

African
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allele frequency: 5.122950819672131e-4
allele num: 9760
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Other
type: Population
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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East Asian
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Latino
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ClippingRankSum
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QD
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FS
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQRankSum
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 1.020408163265306e-4
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
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MQ
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SIO_000300: 5.931e1

ClippingRankSum
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BaseQRankSum
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VQSLOD
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SIO_000300: 8.66e-1

ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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SIO_000300: 2.8e-3

DP
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QD
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

Other
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num of homozygotes: 0

European (Finnish)
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allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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QD
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VQSLOD
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DP
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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FS
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MQ
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 1.499250374812594e-4
allele num: 66700
num of homozygotes: 0

African
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

South Asian
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QD
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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MQRankSum
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FS
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DP
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InbreedingCoeff
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ClippingRankSum
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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Latino
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allele num: 11574
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East Asian
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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ReadPosRankSum
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DP
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MQ
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MQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66648
num of homozygotes: 0

African
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East Asian
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Latino
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Other
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South Asian
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European (Finnish)
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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FS
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DP
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MQ
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

Latino
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South Asian
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European (Non-Finnish)
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East Asian
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African
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Other
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MQ
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BaseQRankSum
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QD
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FS
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ClippingRankSum
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VQSLOD
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DP
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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European (Non-Finnish)
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African
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Other
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Latino
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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SIO_000300: 9.779999999999999e0

DP
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SIO_000300: 2.707451e6

ReadPosRankSum
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SIO_000300: 4.62e-1

InbreedingCoeff
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SIO_000300: 5.0e-4

ClippingRankSum
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SIO_000300: 5.19e-1

FS
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BaseQRankSum
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MQRankSum
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SIO_000300: 5.0e-1

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 7.39e-1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 4
allele frequency: 2.5230225810521e-4
allele num: 15854
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.513450081242101e-5
allele num: 66468
num of homozygotes: 0

BaseQRankSum
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FS
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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ClippingRankSum
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DP
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 4
allele frequency: 4.084967320261438e-4
allele num: 9792
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66448
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15816
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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SIO_000300: -4.65e-1

InbreedingCoeff
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SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.987e0

QD
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FS
type: SiteQuality
SIO_000300: 2.492e0

ReadPosRankSum
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SIO_000300: 4.56e-1

DP
type: SiteQuality
SIO_000300: 2.701502e6

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.366993505666624e-5
allele num: 15706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66402
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.245e1

FS
type: SiteQuality
SIO_000300: 2.292e0

BaseQRankSum
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SIO_000300: -3.567e0

MQRankSum
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VQSLOD
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MQ
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SIO_000300: 6.0e1

InbreedingCoeff
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SIO_000300: 3.0e-4

ReadPosRankSum
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SIO_000300: 3.53e-1

DP
type: SiteQuality
SIO_000300: 2.69593e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.26e-1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66252
num of homozygotes: 0

African
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allele count: 7
allele frequency: 7.158928206177132e-4
allele num: 9778
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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DP
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FS
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ReadPosRankSum
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InbreedingCoeff
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MQ
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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Latino
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
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allele num: 66166
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European (Finnish)
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Other
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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MQRankSum
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MQ
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FS
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
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num of homozygotes: 0

African
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66126
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East Asian
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European (Finnish)
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Other
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FS
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VQSLOD
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BaseQRankSum
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MQ
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InbreedingCoeff
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QD
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MQRankSum
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ReadPosRankSum
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DP
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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Latino
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African
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Other
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
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DP
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MQRankSum
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FS
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ReadPosRankSum
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QD
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -1.788e0

InbreedingCoeff
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SIO_000300: 6.1e-3

VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.5148760831364e-5
allele num: 66012
num of homozygotes: 0

Latino
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South Asian
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African
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European (Finnish)
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Other
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East Asian
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ReadPosRankSum
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VQSLOD
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MQ
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BaseQRankSum
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FS
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DP
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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European (Finnish)
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African
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BaseQRankSum
type: SiteQuality
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MQRankSum
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MQ
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ClippingRankSum
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VQSLOD
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FS
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DP
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InbreedingCoeff
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QD
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 1

Other
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allele frequency: 0.0e0
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African
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 61242
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Latino
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allele frequency: 9.706853038245001e-5
allele num: 10302
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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MQ
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VQSLOD
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DP
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QD
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.629354449767002e-5
allele num: 61374
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European (Finnish)
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allele frequency: 0.0e0
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African
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Other
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South Asian
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Latino
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ClippingRankSum
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MQ
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ReadPosRankSum
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DP
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FS
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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MQRankSum
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GenotypeQuality
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variant carriers: 1

East Asian
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South Asian
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 61532
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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num of homozygotes: 0

DP
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MQ
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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FS
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ReadPosRankSum
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QD
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.247807729782397e-5
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African
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East Asian
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Latino
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South Asian
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Other
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DP
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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FS
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QD
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MQ
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ClippingRankSum
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GenotypeQuality
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East Asian
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South Asian
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Other
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.621691748832382e-5
allele num: 61664
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European (Finnish)
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ClippingRankSum
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MQ
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QD
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DP
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

Other
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allele num: 802
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European (Non-Finnish)
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South Asian
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African
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European (Finnish)
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Latino
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East Asian
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allele frequency: 2.513194269917064e-4
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BaseQRankSum
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QD
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FS
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MQRankSum
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ReadPosRankSum
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DP
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VQSLOD
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InbreedingCoeff
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MQ
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ClippingRankSum
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GenotypeQuality
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Other
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African
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European (Finnish)
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East Asian
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Latino
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European (Non-Finnish)
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South Asian
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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ReadPosRankSum
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FS
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ClippingRankSum
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QD
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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African
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East Asian
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European (Non-Finnish)
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Other
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South Asian
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InbreedingCoeff
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FS
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ClippingRankSum
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QD
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VQSLOD
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MQRankSum
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MQ
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.161955353190413e-5
allele num: 63252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9492
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.874015748031496e-5
allele num: 12700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10840
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8216
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.05e-1

DP
type: SiteQuality
SIO_000300: 1.391964e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

FS
type: SiteQuality
SIO_000300: 4.363e0

QD
type: SiteQuality
SIO_000300: 1.256e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.74e-1

GenotypeQuality
all individuals: 1045
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10970
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8288
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9540
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

MQRankSum
type: SiteQuality
SIO_000300: -1.495e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e0

VQSLOD
type: SiteQuality
SIO_000300: -1.701e0

DP
type: SiteQuality
SIO_000300: 1.410815e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

QD
type: SiteQuality
SIO_000300: 1.922e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

GenotypeQuality
all individuals: 886
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550820383983127e-5
allele num: 64482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9624
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.64e-1

DP
type: SiteQuality
SIO_000300: 1.437624e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.321e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e-1

FS
type: SiteQuality
SIO_000300: 6.401e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.764e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.92e-1

GenotypeQuality
all individuals: 2161
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14036
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529472943623627e-5
allele num: 65382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9710
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.042e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQ
type: SiteQuality
SIO_000300: 5.899e1

MQRankSum
type: SiteQuality
SIO_000300: -9.94e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.792e0

DP
type: SiteQuality
SIO_000300: 1.466699e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.046e0

QD
type: SiteQuality
SIO_000300: 6.06e0

GenotypeQuality
all individuals: 430
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.750437521876094e-5
allele num: 11428
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14294
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65538
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

QD
type: SiteQuality
SIO_000300: 1.213e1

DP
type: SiteQuality
SIO_000300: 1.473786e6

VQSLOD
type: SiteQuality
SIO_000300: 4.46e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.124e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

GenotypeQuality
all individuals: 1126
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 3.085150143973673e-4
allele num: 9724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.577497024626934e-5
allele num: 65538
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.46e0

QD
type: SiteQuality
SIO_000300: 1.213e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

DP
type: SiteQuality
SIO_000300: 1.473786e6

MQRankSum
type: SiteQuality
SIO_000300: 2.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.124e0

GenotypeQuality
all individuals: 42399
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9734
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.169317118802619e-4
allele num: 8552
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14484
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.522209029743965e-5
allele num: 65694
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Other
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 1.856e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.668e0

QD
type: SiteQuality
SIO_000300: 8.859999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 2.65e-1

DP
type: SiteQuality
SIO_000300: 1.47811e6

MQ
type: SiteQuality
SIO_000300: 6.0e1