11-64825748-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825748
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825748
    reference: chr 11
allele count: 1
allele frequency: 8.428292090890703e-6
allele num: 118648
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.267T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.186-26T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.186-26T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.186-26T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.186-26T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.267T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.186-26T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.186-26T>C
  variant of: http://identifiers.org/hgnc/23536
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6606
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44855
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1371
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1830
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

11-64825749-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825749
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825749
    reference: chr 11
allele count: 1
allele frequency: 8.42715566641947e-6
allele num: 118664
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.266C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.186-27C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.186-27C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.266C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.186-27C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.186-27C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.186-27C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.186-27C>T
  variant of: http://identifiers.org/hgnc/23536
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6613
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21814
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27770
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1825
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1796
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD

11-64825755-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825755
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825755
    reference: chr 11
allele count: 2
allele frequency: 1.68168976187273e-5
allele num: 118928
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.260C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.260C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.186-33C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.186-33C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.186-33C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.186-33C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.186-33C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.186-33C>T
  variant of: http://identifiers.org/hgnc/23536
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6625
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45114
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7795
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

11-64825757-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825757
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825757
    reference: chr 11
allele count: 10
allele frequency: 8.403502579875292e-5
allele num: 118998
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.186-35T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.186-35T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.258T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.186-35T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.186-35T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.186-35T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.258T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.186-35T>C
  variant of: http://identifiers.org/hgnc/23536
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27991
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6637
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22031
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1840
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1534
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

11-64825762-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825762
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825762
    reference: chr 11
allele count: 1
allele frequency: 8.387010198604401e-6
allele num: 119232
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.186-40C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.253C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.186-40C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.253C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.186-40C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.186-40C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.186-40C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.186-40C>T
  variant of: http://identifiers.org/hgnc/23536
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22242
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7846
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45790
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-64825769-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825769
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825769
    reference: chr 11
allele count: 1
allele frequency: 8.362462577979963e-6
allele num: 119582
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.185+40C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.246C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.185+40C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.246C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.185+40C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.185+40C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.185+40C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.185+40C>T
  variant of: http://identifiers.org/hgnc/23536
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1849
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-64825770-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825770
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825770
    reference: chr 11
allele count: 1
allele frequency: 8.358688020328329e-6
allele num: 119636
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.245G>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.185+39G>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.185+39G>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.185+39G>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.245G>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.185+39G>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.185+39G>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.185+39G>T
  variant of: http://identifiers.org/hgnc/23536
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7875
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1852
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

11-64825781-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825781
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825781
    reference: chr 11
allele count: 1
allele frequency: 8.332083520805212e-6
allele num: 120018
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.185+28G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.185+28G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.234G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.234G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.185+28G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.185+28G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.185+28G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.185+28G>A
  variant of: http://identifiers.org/hgnc/23536
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28619
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22765
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1858
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

11-64825782-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825782
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825782
    reference: chr 11
allele count: 7
allele frequency: 5.826729706332823e-5
allele num: 120136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.185+27C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.233C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.185+27C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.185+27C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.233C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.185+27C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.185+27C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.185+27C>T
  variant of: http://identifiers.org/hgnc/23536
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7939
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

11-64825784-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825784
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825784
    reference: chr 11
allele count: 1
allele frequency: 8.316561600771776e-6
allele num: 120242
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.185+25T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.231T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.185+25T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.185+25T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.231T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.185+25T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.185+25T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.185+25T>C
  variant of: http://identifiers.org/hgnc/23536
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

11-64825791-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825791
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825791
    reference: chr 11
allele count: 2
allele frequency: 1.659888787451241e-5
allele num: 120490
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.185+18C>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.185+18C>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.224C>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.185+18C>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.185+18C>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.185+18C>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.224C>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.185+18C>G
  variant of: http://identifiers.org/hgnc/23536
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23030
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

11-64825793-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825793
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825793
    reference: chr 11
allele count: 1
allele frequency: 8.296276631047985e-6
allele num: 120536
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.222A>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.185+16A>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.185+16A>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.185+16A>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.222A>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.185+16A>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.185+16A>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.185+16A>G
  variant of: http://identifiers.org/hgnc/23536
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28873
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23043
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1874
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47425
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

11-64825797-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825797
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825797
    reference: chr 11
allele count: 2
allele frequency: 1.657962364254331e-5
allele num: 120630
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.218G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.185+12G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.185+12G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.185+12G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.185+12G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.218G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.185+12G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.185+12G>A
  variant of: http://identifiers.org/hgnc/23536
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6782
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23061
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28935
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8003
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

11-64825806-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825806
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825806
    reference: chr 11
allele count: 1
allele frequency: 8.279516476237788e-6
allele num: 120780
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.185+3G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.185+3G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.209G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.185+3G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.185+3G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.185+3G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.185+3G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.209G>A
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
hgvs: c.185+3G>A
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

11-64825819-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825819
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825819
    reference: chr 11
allele count: 1
allele frequency: 8.272803984182399e-6
allele num: 120878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.175G>A
  hgvsp: ENSP00000347955.3:p.Glu59Lys
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.175G>A
  hgvsp: ENSP00000349045.3:p.Glu59Lys
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.175G>A
  hgvsp: ENSP00000347530.2:p.Glu59Lys
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.175G>A
  hgvsp: ENSP00000340111.2:p.Glu59Lys
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.196G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.175G>A
  hgvsp: ENSP00000344244.4:p.Glu59Lys
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.175G>A
  hgvsp: ENSP00000351484.3:p.Glu59Lys
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.196G>A
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6800
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8027
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1886
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Glu59Lys
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

11-64825821-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825821
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825821
    reference: chr 11
allele count: 18
allele frequency: 1.489055442497642e-4
allele num: 120882
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.173G>A
  hgvsp: ENSP00000340111.2:p.Arg58Gln
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.173G>A
  hgvsp: ENSP00000349045.3:p.Arg58Gln
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.173G>A
  hgvsp: ENSP00000344244.4:p.Arg58Gln
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.173G>A
  hgvsp: ENSP00000347530.2:p.Arg58Gln
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.173G>A
  hgvsp: ENSP00000347955.3:p.Arg58Gln
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.194G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.194G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.173G>A
  hgvsp: ENSP00000351484.3:p.Arg58Gln
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6797
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29085
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg58Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

11-64825822-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825822
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825822
    reference: chr 11
allele count: 2
allele frequency: 1.654150263009892e-5
allele num: 120908
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.193C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.172C>T
  hgvsp: ENSP00000347955.3:p.Arg58Trp
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.172C>T
  hgvsp: ENSP00000340111.2:p.Arg58Trp
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.172C>T
  hgvsp: ENSP00000347530.2:p.Arg58Trp
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.193C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.172C>T
  hgvsp: ENSP00000349045.3:p.Arg58Trp
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.172C>T
  hgvsp: ENSP00000344244.4:p.Arg58Trp
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.172C>T
  hgvsp: ENSP00000351484.3:p.Arg58Trp
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29102
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23117
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47748
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg58Trp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

11-64825841-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825841
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825841
    reference: chr 11
allele count: 1
allele frequency: 8.267059076404159e-6
allele num: 120962
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.153G>A
  hgvsp: ENST00000356632.3:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.153G>A
  hgvsp: ENST00000358658.3:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.153G>A
  hgvsp: ENST00000339885.2:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.153G>A
  hgvsp: ENST00000340252.4:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.174G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.153G>A
  hgvsp: ENST00000355721.3:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.153G>A
  hgvsp: ENST00000355369.2:c.153G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.174G>A
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6813
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8008
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln51Gln
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

11-64825848-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825848
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825848
    reference: chr 11
allele count: 1
allele frequency: 8.268836409340477e-6
allele num: 120936
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.146T>C
  hgvsp: ENSP00000344244.4:p.Met49Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.167T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.167T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.146T>C
  hgvsp: ENSP00000351484.3:p.Met49Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.146T>C
  hgvsp: ENSP00000349045.3:p.Met49Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.146T>C
  hgvsp: ENSP00000347530.2:p.Met49Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.146T>C
  hgvsp: ENSP00000347955.3:p.Met49Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.146T>C
  hgvsp: ENSP00000340111.2:p.Met49Thr
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1404
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8016
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47747
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Met49Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

11-64825849-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825849
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825849
    reference: chr 11
allele count: 1
allele frequency: 8.269109913008963e-6
allele num: 120932
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.145A>G
  hgvsp: ENSP00000340111.2:p.Met49Val
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.145A>G
  hgvsp: ENSP00000344244.4:p.Met49Val
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.145A>G
  hgvsp: ENSP00000349045.3:p.Met49Val
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.145A>G
  hgvsp: ENSP00000351484.3:p.Met49Val
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.145A>G
  hgvsp: ENSP00000347530.2:p.Met49Val
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.145A>G
  hgvsp: ENSP00000347955.3:p.Met49Val
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.166A>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.166A>G
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29164
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8016
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Met49Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ

11-64825849-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825849
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825849
    reference: chr 11
allele count: 1
allele frequency: 8.269109913008963e-6
allele num: 120932
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.145A>C
  hgvsp: ENSP00000349045.3:p.Met49Leu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.145A>C
  hgvsp: ENSP00000344244.4:p.Met49Leu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.145A>C
  hgvsp: ENSP00000340111.2:p.Met49Leu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.145A>C
  hgvsp: ENSP00000351484.3:p.Met49Leu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.145A>C
  hgvsp: ENSP00000347955.3:p.Met49Leu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.166A>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.145A>C
  hgvsp: ENSP00000347530.2:p.Met49Leu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.166A>C
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29164
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Met49Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

11-64825853-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825853
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825853
    reference: chr 11
allele count: 2
allele frequency: 1.653876686954221e-5
allele num: 120928
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.162C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.141C>T
  hgvsp: ENST00000340252.4:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.141C>T
  hgvsp: ENST00000358658.3:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.141C>T
  hgvsp: ENST00000355369.2:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.141C>T
  hgvsp: ENST00000339885.2:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.141C>T
  hgvsp: ENST00000356632.3:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.162C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.141C>T
  hgvsp: ENST00000355721.3:c.141C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29173
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47698
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Thr47Thr
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum

11-64825865-CTCCAGG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825865
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825859
    reference: chr 11
allele count: 1
allele frequency: 8.27348843366317e-6
allele num: 120868
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.123_128delCCTGGA
  hgvsp: ENSP00000347955.3:p.Asp41_Leu42del
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.123_128delCCTGGA
  hgvsp: ENSP00000340111.2:p.Asp41_Leu42del
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.123_128delCCTGGA
  hgvsp: ENSP00000349045.3:p.Asp41_Leu42del
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.123_128delCCTGGA
  hgvsp: ENSP00000347530.2:p.Asp41_Leu42del
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.144_149delCCTGGA
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.123_128delCCTGGA
  hgvsp: ENSP00000344244.4:p.Asp41_Leu42del
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.144_149delCCTGGA
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.123_128delCCTGGA
  hgvsp: ENSP00000351484.3:p.Asp41_Leu42del
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29144
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47525
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp41_Leu42del
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: CTCCAGG
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum

11-64825872-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825872
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825872
    reference: chr 11
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.143A>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.122A>C
  hgvsp: ENSP00000340111.2:p.Asp41Ala
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.122A>C
  hgvsp: ENSP00000349045.3:p.Asp41Ala
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.143A>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.122A>C
  hgvsp: ENSP00000344244.4:p.Asp41Ala
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.122A>C
  hgvsp: ENSP00000347530.2:p.Asp41Ala
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.122A>C
  hgvsp: ENSP00000351484.3:p.Asp41Ala
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.122A>C
  hgvsp: ENSP00000347955.3:p.Asp41Ala
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp41Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum

11-64825873-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825873
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825873
    reference: chr 11
allele count: 1
allele frequency: 8.285416010737898e-6
allele num: 120694
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.121G>A
  hgvsp: ENSP00000349045.3:p.Asp41Asn
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.121G>A
  hgvsp: ENSP00000344244.4:p.Asp41Asn
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.121G>A
  hgvsp: ENSP00000347530.2:p.Asp41Asn
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.121G>A
  hgvsp: ENSP00000347955.3:p.Asp41Asn
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.142G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.142G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.121G>A
  hgvsp: ENSP00000351484.3:p.Asp41Asn
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.121G>A
  hgvsp: ENSP00000340111.2:p.Asp41Asn
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6811
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 47157
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp41Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum

11-64825877-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825877
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825877
    reference: chr 11
allele count: 26
allele frequency: 2.157998705200777e-4
allele num: 120482
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.117C>A
  hgvsp: ENSP00000347955.3:p.Asp39Glu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.138C>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.117C>A
  hgvsp: ENSP00000340111.2:p.Asp39Glu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.117C>A
  hgvsp: ENSP00000344244.4:p.Asp39Glu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.117C>A
  hgvsp: ENSP00000349045.3:p.Asp39Glu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.117C>A
  hgvsp: ENSP00000347530.2:p.Asp39Glu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.117C>A
  hgvsp: ENSP00000351484.3:p.Asp39Glu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.138C>A
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28991
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6786
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7821
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp39Glu
num of homozygotes: 1
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-64825879-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825879
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825879
    reference: chr 11
allele count: 1
allele frequency: 8.304268393954492e-6
allele num: 120420
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.115G>C
  hgvsp: ENSP00000347530.2:p.Asp39His
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.115G>C
  hgvsp: ENSP00000349045.3:p.Asp39His
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.136G>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.115G>C
  hgvsp: ENSP00000347955.3:p.Asp39His
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.115G>C
  hgvsp: ENSP00000351484.3:p.Asp39His
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.115G>C
  hgvsp: ENSP00000344244.4:p.Asp39His
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.115G>C
  hgvsp: ENSP00000340111.2:p.Asp39His
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.136G>C
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 28976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6774
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1826
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7807
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp39His
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ

11-64825881-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825881
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825881
    reference: chr 11
allele count: 1
allele frequency: 8.307855908547122e-6
allele num: 120368
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.113A>T
  hgvsp: ENSP00000349045.3:p.Gln38Leu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.113A>T
  hgvsp: ENSP00000347530.2:p.Gln38Leu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.113A>T
  hgvsp: ENSP00000340111.2:p.Gln38Leu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.113A>T
  hgvsp: ENSP00000344244.4:p.Gln38Leu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.113A>T
  hgvsp: ENSP00000347955.3:p.Gln38Leu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.134A>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.134A>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.113A>T
  hgvsp: ENSP00000351484.3:p.Gln38Leu
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6784
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28940
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1816
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln38Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP

11-64825883-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825883
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825883
    reference: chr 11
allele count: 1
allele frequency: 8.318221896887321e-6
allele num: 120218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.111C>G
  hgvsp: ENST00000340252.4:c.111C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.132C>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.111C>G
  hgvsp: ENST00000355369.2:c.111C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.111C>G
  hgvsp: ENST00000356632.3:c.111C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.111C>G
  hgvsp: ENST00000355721.3:c.111C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.111C>G
  hgvsp: ENST00000358658.3:c.111C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.111C>G
  hgvsp: ENST00000339885.2:c.111C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.132C>G
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6786
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7745
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1800
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro37Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

11-64825885-G-GGGGGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825885
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825890
    reference: chr 11
allele count: 1
allele frequency: 8.324038157390913e-6
allele num: 120134
alternate allele: GGGGGA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.129_130insTCCCC
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.108_109insTCCCC
  hgvsp: ENSP00000347530.2:p.Pro37SerfsTer103
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.108_109insTCCCC
  hgvsp: ENSP00000347955.3:p.Pro37SerfsTer103
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.108_109insTCCCC
  hgvsp: ENSP00000349045.3:p.Pro37SerfsTer103
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.108_109insTCCCC
  hgvsp: ENSP00000351484.3:p.Pro37SerfsTer103
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.108_109insTCCCC
  hgvsp: ENSP00000344244.4:p.Pro37SerfsTer103
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.108_109insTCCCC
  hgvsp: ENSP00000340111.2:p.Pro37SerfsTer103
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.129_130insTCCCC
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6699
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7763
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro37SerfsTer103
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ

11-64825890-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825890
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825890
    reference: chr 11
allele count: 1
allele frequency: 8.343206127250579e-6
allele num: 119858
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.104T>A
  hgvsp: ENSP00000349045.3:p.Leu35Gln
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.104T>A
  hgvsp: ENSP00000340111.2:p.Leu35Gln
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.125T>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.104T>A
  hgvsp: ENSP00000351484.3:p.Leu35Gln
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.104T>A
  hgvsp: ENSP00000347530.2:p.Leu35Gln
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.104T>A
  hgvsp: ENSP00000347955.3:p.Leu35Gln
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.104T>A
  hgvsp: ENSP00000344244.4:p.Leu35Gln
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.125T>A
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45881
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1318
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu35Gln
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

11-64825891-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825891
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825890
    reference: chr 11
allele count: 1
allele frequency: 8.347384764353328e-6
allele num: 119798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.102delA
  hgvsp: ENSP00000344244.4:p.Leu35TrpfsTer103
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.102delA
  hgvsp: ENSP00000340111.2:p.Leu35TrpfsTer103
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.102delA
  hgvsp: ENSP00000351484.3:p.Leu35TrpfsTer103
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.123delA
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.102delA
  hgvsp: ENSP00000347955.3:p.Leu35TrpfsTer103
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.123delA
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.102delA
  hgvsp: ENSP00000347530.2:p.Leu35TrpfsTer103
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.102delA
  hgvsp: ENSP00000349045.3:p.Leu35TrpfsTer103
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7669
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu35TrpfsTer103
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: GT
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

11-64825909-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825909
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825909
    reference: chr 11
allele count: 3
allele frequency: 2.547294772951126e-5
allele num: 117772
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.106C>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.85C>A
  hgvsp: ENSP00000347955.3:p.Pro29Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.85C>A
  hgvsp: ENSP00000351484.3:p.Pro29Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.85C>A
  hgvsp: ENSP00000344244.4:p.Pro29Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.85C>A
  hgvsp: ENSP00000349045.3:p.Pro29Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.85C>A
  hgvsp: ENSP00000340111.2:p.Pro29Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.106C>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.85C>A
  hgvsp: ENSP00000347530.2:p.Pro29Thr
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21107
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27211
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7292
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3379
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43373
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro29Thr
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

11-64825917-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825917
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825917
    reference: chr 11
allele count: 133
allele frequency: 1.146215764344933e-3
allele num: 116034
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.77T>A
  hgvsp: ENSP00000347955.3:p.Phe26Tyr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.77T>A
  hgvsp: ENSP00000340111.2:p.Phe26Tyr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.77T>A
  hgvsp: ENSP00000349045.3:p.Phe26Tyr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.77T>A
  hgvsp: ENSP00000347530.2:p.Phe26Tyr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.77T>A
  hgvsp: ENSP00000344244.4:p.Phe26Tyr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.98T>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.77T>A
  hgvsp: ENSP00000351484.3:p.Phe26Tyr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.98T>A
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20365
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 25886
  bin: 2.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5726
  bin: 3.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 3423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6833
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5058
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41214
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Phe26Tyr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum

11-64825918-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825918
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825918
    reference: chr 11
allele count: 1
allele frequency: 8.636026046254556e-6
allele num: 115794
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.97T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.76T>C
  hgvsp: ENSP00000340111.2:p.Phe26Leu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.76T>C
  hgvsp: ENSP00000347530.2:p.Phe26Leu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.76T>C
  hgvsp: ENSP00000344244.4:p.Phe26Leu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.97T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.76T>C
  hgvsp: ENSP00000349045.3:p.Phe26Leu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.76T>C
  hgvsp: ENSP00000347955.3:p.Phe26Leu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.76T>C
  hgvsp: ENSP00000351484.3:p.Phe26Leu
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5697
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2733
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25728
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe26Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD

11-64825924-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825924
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825924
    reference: chr 11
allele count: 138
allele frequency: 1.208787358536842e-3
allele num: 114164
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.70G>C
  hgvsp: ENSP00000347955.3:p.Gly24Arg
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.70G>C
  hgvsp: ENSP00000340111.2:p.Gly24Arg
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.91G>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.70G>C
  hgvsp: ENSP00000347530.2:p.Gly24Arg
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.70G>C
  hgvsp: ENSP00000344244.4:p.Gly24Arg
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.91G>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.70G>C
  hgvsp: ENSP00000349045.3:p.Gly24Arg
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.70G>C
  hgvsp: ENSP00000351484.3:p.Gly24Arg
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20095
  bin: 2.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 4377
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24252
  bin: 2.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5360
  bin: 3.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1062
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6560
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly24Arg
num of homozygotes: 4
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: QD

11-64825924-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825924
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825924
    reference: chr 11
allele count: 1
allele frequency: 8.759328685049578e-6
allele num: 114164
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.70G>A
  hgvsp: ENSP00000340111.2:p.Gly24Ser
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.70G>A
  hgvsp: ENSP00000349045.3:p.Gly24Ser
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.70G>A
  hgvsp: ENSP00000347955.3:p.Gly24Ser
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.70G>A
  hgvsp: ENSP00000351484.3:p.Gly24Ser
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.70G>A
  hgvsp: ENSP00000344244.4:p.Gly24Ser
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.91G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.70G>A
  hgvsp: ENSP00000347530.2:p.Gly24Ser
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.91G>A
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5360
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20095
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4377
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38567
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6560
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6371
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly24Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

11-64825925-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825925
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825925
    reference: chr 11
allele count: 8
allele frequency: 7.008322382829611e-5
allele num: 114150
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.69C>T
  hgvsp: ENST00000355369.2:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.69C>T
  hgvsp: ENST00000340252.4:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.90C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.90C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.69C>T
  hgvsp: ENST00000339885.2:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.69C>T
  hgvsp: ENST00000358658.3:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.69C>T
  hgvsp: ENST00000356632.3:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.69C>T
  hgvsp: ENST00000355721.3:c.69C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3481
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20290
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4402
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24245
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5239
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6334
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu23Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

11-64825932-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825932
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825932
    reference: chr 11
allele count: 1
allele frequency: 8.911385185713268e-6
allele num: 112216
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.83T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.62T>C
  hgvsp: ENSP00000349045.3:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.62T>C
  hgvsp: ENSP00000347530.2:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.62T>C
  hgvsp: ENSP00000347955.3:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.62T>C
  hgvsp: ENSP00000344244.4:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.83T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.62T>C
  hgvsp: ENSP00000351484.3:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.62T>C
  hgvsp: ENSP00000340111.2:p.Ile21Thr
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4423
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4931
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5462
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1215
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1315
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ile21Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-64825933-TCCCCAGCCCCAAGAGGGCAGCAGC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825933
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825909
    reference: chr 11
allele count: 10
allele frequency: 8.943263933605208e-5
allele num: 111816
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsp: ENSP00000347530.2:p.Ala13_Gly20del
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsp: ENSP00000351484.3:p.Ala13_Gly20del
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsp: ENSP00000347955.3:p.Ala13_Gly20del
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsp: ENSP00000344244.4:p.Ala13_Gly20del
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsp: ENSP00000349045.3:p.Ala13_Gly20del
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsp: ENSP00000340111.2:p.Ala13_Gly20del
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19382
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4552
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5627
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22795
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2540
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8582
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36430
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala13_Gly20del
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: TCCCCAGCCCCAAGAGGGCAGCAGC
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

11-64825941-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825941
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825941
    reference: chr 11
allele count: 1
allele frequency: 9.21574048474795e-6
allele num: 108510
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.53G>C
  hgvsp: ENSP00000340111.2:p.Gly18Ala
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.53G>C
  hgvsp: ENSP00000347530.2:p.Gly18Ala
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.53G>C
  hgvsp: ENSP00000344244.4:p.Gly18Ala
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.74G>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.53G>C
  hgvsp: ENSP00000351484.3:p.Gly18Ala
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.53G>C
  hgvsp: ENSP00000349045.3:p.Gly18Ala
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.74G>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.53G>C
  hgvsp: ENSP00000347955.3:p.Gly18Ala
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7363
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1611
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1611
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly18Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

11-64825941-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825941
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825941
    reference: chr 11
allele count: 1
allele frequency: 9.21574048474795e-6
allele num: 108510
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.53G>A
  hgvsp: ENSP00000349045.3:p.Gly18Glu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.53G>A
  hgvsp: ENSP00000351484.3:p.Gly18Glu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.53G>A
  hgvsp: ENSP00000347955.3:p.Gly18Glu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.74G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.53G>A
  hgvsp: ENSP00000340111.2:p.Gly18Glu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.53G>A
  hgvsp: ENSP00000347530.2:p.Gly18Glu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.53G>A
  hgvsp: ENSP00000344244.4:p.Gly18Glu
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.74G>A
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7363
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21402
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5686
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33687
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly18Glu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum

11-64825946-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825946
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825946
    reference: chr 11
allele count: 2
allele frequency: 1.894405819614678e-5
allele num: 105574
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.69C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.48C>T
  hgvsp: ENST00000355721.3:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.48C>T
  hgvsp: ENST00000358658.3:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.48C>T
  hgvsp: ENST00000339885.2:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.48C>T
  hgvsp: ENST00000356632.3:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.48C>T
  hgvsp: ENST00000340252.4:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.69C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.48C>T
  hgvsp: ENST00000355369.2:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8853
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4363
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1926
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu16Leu
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

11-64825947-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825947
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825947
    reference: chr 11
allele count: 1
allele frequency: 9.476157986505951e-6
allele num: 105528
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.47T>C
  hgvsp: ENSP00000349045.3:p.Leu16Pro
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.47T>C
  hgvsp: ENSP00000347530.2:p.Leu16Pro
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.68T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.47T>C
  hgvsp: ENSP00000344244.4:p.Leu16Pro
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.47T>C
  hgvsp: ENSP00000347955.3:p.Leu16Pro
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.68T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.47T>C
  hgvsp: ENSP00000340111.2:p.Leu16Pro
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.47T>C
  hgvsp: ENSP00000351484.3:p.Leu16Pro
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8879
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1926
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13969
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu16Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

11-64825952-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825952
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825952
    reference: chr 11
allele count: 2
allele frequency: 2.002683596018665e-5
allele num: 99866
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.63T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.42T>C
  hgvsp: ENST00000356632.3:c.42T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.63T>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.42T>C
  hgvsp: ENST00000355721.3:c.42T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.42T>C
  hgvsp: ENST00000358658.3:c.42T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.42T>C
  hgvsp: ENST00000340252.4:c.42T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.42T>C
  hgvsp: ENST00000355369.2:c.42T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.42T>C
  hgvsp: ENST00000339885.2:c.42T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13208
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17063
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10044
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala14Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS

11-64825954-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825954
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825954
    reference: chr 11
allele count: 1
allele frequency: 1.023897774046239e-5
allele num: 97666
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.40G>A
  hgvsp: ENSP00000347955.3:p.Ala14Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.40G>A
  hgvsp: ENSP00000344244.4:p.Ala14Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.61G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.40G>A
  hgvsp: ENSP00000349045.3:p.Ala14Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.40G>A
  hgvsp: ENSP00000340111.2:p.Ala14Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.40G>A
  hgvsp: ENSP00000347530.2:p.Ala14Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.61G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.40G>A
  hgvsp: ENSP00000351484.3:p.Ala14Thr
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4028
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10814
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1654
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1521
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala14Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/11-64825957-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825957
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825957
    reference: chr 11
allele count: 1
allele frequency: 1.024989237613005e-5
allele num: 97562
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.37G>T
  hgvsp: ENSP00000351484.3:p.Ala13Ser
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.37G>T
  hgvsp: ENSP00000344244.4:p.Ala13Ser
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.37G>T
  hgvsp: ENSP00000349045.3:p.Ala13Ser
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.37G>T
  hgvsp: ENSP00000347955.3:p.Ala13Ser
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.58G>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.37G>T
  hgvsp: ENSP00000340111.2:p.Ala13Ser
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.58G>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.37G>T
  hgvsp: ENSP00000347530.2:p.Ala13Ser
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3415
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3789
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12578
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11032
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24918
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2566
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala13Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

11-64825957-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825957
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825957
    reference: chr 11
allele count: 7
allele frequency: 7.174924663291035e-5
allele num: 97562
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.37G>A
  hgvsp: ENSP00000340111.2:p.Ala13Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.37G>A
  hgvsp: ENSP00000347955.3:p.Ala13Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.58G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.37G>A
  hgvsp: ENSP00000351484.3:p.Ala13Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.37G>A
  hgvsp: ENSP00000347530.2:p.Ala13Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.58G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.37G>A
  hgvsp: ENSP00000344244.4:p.Ala13Thr
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.37G>A
  hgvsp: ENSP00000349045.3:p.Ala13Thr
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11032
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12578
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3789
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3415
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2566
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3852
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala13Thr
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

11-64825967-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825967
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825967
    reference: chr 11
allele count: 2
allele frequency: 2.194666959288928e-5
allele num: 91130
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.27G>C
  hgvsp: ENST00000356632.3:c.27G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.27G>C
  hgvsp: ENST00000358658.3:c.27G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.27G>C
  hgvsp: ENST00000340252.4:c.27G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.48G>C
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.27G>C
  hgvsp: ENST00000355721.3:c.27G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.27G>C
  hgvsp: ENST00000355369.2:c.27G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.27G>C
  hgvsp: ENST00000339885.2:c.27G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.48G>C
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3715
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1944
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14045
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12396
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12901
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14445
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1555
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21448
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2849
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 8.25e1
  variant carriers: 1
hgvs: p.Leu9Leu
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: ClippingRankSum

11-64825980-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825980
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825980
    reference: chr 11
allele count: 1
allele frequency: 1.214506060385241e-5
allele num: 82338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.14A>T
  hgvsp: ENSP00000347955.3:p.Lys5Met
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.14A>T
  hgvsp: ENSP00000351484.3:p.Lys5Met
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.35A>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.14A>T
  hgvsp: ENSP00000344244.4:p.Lys5Met
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.14A>T
  hgvsp: ENSP00000349045.3:p.Lys5Met
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.14A>T
  hgvsp: ENSP00000340111.2:p.Lys5Met
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.14A>T
  hgvsp: ENSP00000347530.2:p.Lys5Met
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.35A>T
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8727
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17493
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10405
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3491
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2916
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28615
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys5Met
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

11-64825982-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825982
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825982
    reference: chr 11
allele count: 11
allele frequency: 1.362397820163488e-4
allele num: 80740
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.12G>A
  hgvsp: ENST00000355369.2:c.12G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.12G>A
  hgvsp: ENST00000339885.2:c.12G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.12G>A
  hgvsp: ENST00000356632.3:c.12G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.12G>A
  hgvsp: ENST00000355721.3:c.12G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.33G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.12G>A
  hgvsp: ENST00000340252.4:c.12G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.12G>A
  hgvsp: ENST00000358658.3:c.12G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.33G>A
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 17872
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9858
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17984
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8095
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1973
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1453
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29338
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr4Thr
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

11-64825983-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825983
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825983
    reference: chr 11
allele count: 1
allele frequency: 1.249750049990002e-5
allele num: 80016
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.11C>T
  hgvsp: ENSP00000347530.2:p.Thr4Met
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.11C>T
  hgvsp: ENSP00000344244.4:p.Thr4Met
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.11C>T
  hgvsp: ENSP00000340111.2:p.Thr4Met
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.32C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.11C>T
  hgvsp: ENSP00000351484.3:p.Thr4Met
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.32C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.11C>T
  hgvsp: ENSP00000349045.3:p.Thr4Met
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.11C>T
  hgvsp: ENSP00000347955.3:p.Thr4Met
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18092
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9719
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29806
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2958
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr4Met
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

11-64825983-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825983
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825983
    reference: chr 11
allele count: 1
allele frequency: 1.249750049990002e-5
allele num: 80016
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.32C>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.11C>G
  hgvsp: ENSP00000351484.3:p.Thr4Arg
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000344244
  ensembl transcript: ENST00000340252
  gene symbol: NAALADL1
  hgvsc: ENST00000340252.4:c.11C>G
  hgvsp: ENSP00000344244.4:p.Thr4Arg
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000349045
  ensembl transcript: ENST00000356632
  gene symbol: NAALADL1
  hgvsc: ENST00000356632.3:c.11C>G
  hgvsp: ENSP00000349045.3:p.Thr4Arg
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347955
  ensembl transcript: ENST00000355721
  gene symbol: NAALADL1
  hgvsc: ENST00000355721.3:c.11C>G
  hgvsp: ENSP00000347955.3:p.Thr4Arg
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.11C>G
  hgvsp: ENSP00000340111.2:p.Thr4Arg
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.11C>G
  hgvsp: ENSP00000347530.2:p.Thr4Arg
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.32C>G
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18092
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9719
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15186
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr4Arg
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

11-64825997-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825997
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825997
    reference: chr 11
allele count: 1
allele frequency: 1.420212463784582e-5
allele num: 70412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.18C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.18C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.-4C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.-4C>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.-4C>T
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4614
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20569
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3714
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6369
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9095
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1412
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3287
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33247
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1285
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/11-64825998-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825998
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825998
    reference: chr 11
allele count: 3
allele frequency: 4.296024745102532e-5
allele num: 69832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.-5G>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.17G>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.17G>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.-5G>T
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.-5G>T
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2979
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21272
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20547
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6416
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4572
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9357
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3710
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33449
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4051
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3204
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1332
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

11-64825998-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64825998
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64825998
    reference: chr 11
allele count: 2
allele frequency: 2.864016496735021e-5
allele num: 69832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.17G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.17G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.-5G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.-5G>A
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.-5G>A
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6416
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2979
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20547
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4572
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1332
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33449
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4051
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3204
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9357
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/11-64826001-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64826001
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64826001
    reference: chr 11
allele count: 1
allele frequency: 1.472537181563835e-5
allele num: 67910
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.-8T>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000528977
  gene symbol: NAALADL1
  hgvsc: ENST00000528977.1:n.14T>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000340111
  ensembl transcript: ENST00000339885
  gene symbol: NAALADL1
  hgvsc: ENST00000339885.2:c.-8T>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000168060
  ensembl transcript: ENST00000529274
  gene symbol: NAALADL1
  hgvsc: ENST00000529274.1:n.14T>G
  variant of: http://identifiers.org/hgnc/23536
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000347530
  ensembl transcript: ENST00000355369
  gene symbol: NAALADL1
  hgvsc: ENST00000355369.2:c.-8T>G
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2865
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21208
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5470
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3324
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33624
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4730
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

11-64826021-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64826021
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64826021
    reference: chr 11
allele count: 2
allele frequency: 3.647638154295094e-5
allele num: 54830
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000168060
  ensembl protein: ENSP00000351484
  ensembl transcript: ENST00000358658
  gene symbol: NAALADL1
  hgvsc: ENST00000358658.3:c.-28C>G
  variant of: http://identifiers.org/hgnc/23536
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22951
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9440
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20691
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3061
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4007
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10075
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2597
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2922
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2185
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30494
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1513
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4205
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4064
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4510
  num of homozygotes: 0
population: African
  type: Population
  allele count: 2
  allele frequency: 3.580379520229145e-4
  allele num: 5586
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

11-64826022-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64826022
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64826022
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 54134
alternate allele: C
canonical: true
consequence: upstream gene
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9728
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23020
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20478
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2310
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4194
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2715
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30023
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1553
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10376
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4024
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2788
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4402
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3964
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2602
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 352
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD

11-64826031-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64826031
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64826031
    reference: chr 11
allele count: 1
allele frequency: 2.099252666050886e-5
allele num: 47636
alternate allele: G
canonical: true
consequence: upstream gene
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11438
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17816
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4080
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12415
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3804
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3726
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5114
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4252
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3218
  num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

11-64826045-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64826045
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64826045
    reference: chr 11
allele count: 1
allele frequency: 2.618486514794449e-5
allele num: 38190
alternate allele: G
canonical: true
consequence: upstream gene
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11765
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14235
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 694
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1949
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4222
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3983
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13943
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6821
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11723
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 88
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3606
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 250
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 1812
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2942
  num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

11-64833831-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64833831
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64833831
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 22
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432183
  ensembl transcript: ENST00000529290
  gene symbol: CDCA5
  hgvsc: ENST00000529290.1:c.730C>T
  hgvsp: ENST00000529290.1:c.730C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14626
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6541
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1
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genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu244Leu
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 12
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

11-64833891-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64833891
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64833891
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 830
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432183
  ensembl transcript: ENST00000529290
  gene symbol: CDCA5
  hgvsc: ENST00000529290.1:c.670C>T
  hgvsp: ENST00000529290.1:c.670C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14626
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432342
  ensembl transcript: ENST00000525464
  gene symbol: CDCA5
  hgvsc: ENST00000525464.1:c.618C>T
  hgvsp: ENST00000525464.1:c.618C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14626
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
hgvs: p.His224His
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 18
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

11-64833935-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64833935
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64833935
    reference: chr 11
allele count: 5459
allele frequency: 5.555668634235701e-1
allele num: 9826
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432342
  ensembl transcript: ENST00000525464
  gene symbol: CDCA5
  hgvsc: ENST00000525464.1:c.574C>T
  hgvsp: ENSP00000432342.1:p.Pro192Ser
  variant of: http://identifiers.org/hgnc/14626
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432183
  ensembl transcript: ENST00000529290
  gene symbol: CDCA5
  hgvsc: ENST00000529290.1:c.626C>T
  hgvsp: ENSP00000432183.1:p.Pro210Ser
  variant of: http://identifiers.org/hgnc/14626
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 7.5e0
  variant carriers: 286
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 2.25e1
  variant carriers: 1061
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 3.25e1
  variant carriers: 385
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 491
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 158
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 1.75e1
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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  bin: 2.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 7.75e1
  variant carriers: 142
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 99
genotype quality: GenotypeQuality
  all individuals: 1277
  bin: 7.5e0
  variant carriers: 241
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.75e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.25e1
  variant carriers: 93
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.75e1
  variant carriers: 82
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.25e1
  variant carriers: 142
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.25e1
  variant carriers: 76
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.75e1
  variant carriers: 168
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 2508
  bin: 9.75e1
  variant carriers: 2508
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 8.25e1
  variant carriers: 114
hgvs: p.Pro210Ser
num of homozygotes: 1520
population: European (Non-Finnish)
  type: Population
  allele count: 1763
  allele frequency: 6.940944881889763e-1
  allele num: 2540
  num of homozygotes: 604
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

11-64833956-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64833956
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64833956
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 10368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432342
  ensembl transcript: ENST00000525464
  gene symbol: CDCA5
  hgvsc: ENST00000525464.1:c.564-11T>C
  variant of: http://identifiers.org/hgnc/14626
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432183
  ensembl transcript: ENST00000529290
  gene symbol: CDCA5
  hgvsc: ENST00000529290.1:c.605T>C
  hgvsp: ENSP00000432183.1:p.Ser203Pro
  variant of: http://identifiers.org/hgnc/14626
canonical: false
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2781
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  variant carriers: 0
hgvs: p.Ser203Pro
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
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site quality: DP
site quality: MQ
site quality: QD
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11-64833964-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64833964
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64833964
    reference: chr 11
allele count: 1
allele frequency: 9.571209800918837e-5
allele num: 10448
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432342
  ensembl transcript: ENST00000525464
  gene symbol: CDCA5
  hgvsc: ENST00000525464.1:c.564-19G>A
  variant of: http://identifiers.org/hgnc/14626
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432183
  ensembl transcript: ENST00000529290
  gene symbol: CDCA5
  hgvsc: ENST00000529290.1:c.597G>A
  hgvsp: ENSP00000432183.1:p.Arg200Gln
  variant of: http://identifiers.org/hgnc/14626
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg200Gln
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

11-64833986-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64833986
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64833986
    reference: chr 11
allele count: 7
allele frequency: 6.557991380925614e-4
allele num: 10674
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432342
  ensembl transcript: ENST00000525464
  gene symbol: CDCA5
  hgvsc: ENST00000525464.1:c.563+38G>A
  variant of: http://identifiers.org/hgnc/14626
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432183
  ensembl transcript: ENST00000529290
  gene symbol: CDCA5
  hgvsc: ENST00000529290.1:c.575G>A
  hgvsp: ENSP00000432183.1:p.Gly193Ser
  variant of: http://identifiers.org/hgnc/14626
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 847
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  variant carriers: 0
hgvs: p.Gly193Ser
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 132
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
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site quality: BaseQRankSum

11-64834008-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64834008
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64834008
    reference: chr 11
allele count: 1
allele frequency: 9.298865538404315e-5
allele num: 10754
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432183
  ensembl transcript: ENST00000529290
  gene symbol: CDCA5
  hgvsc: ENST00000529290.1:c.553T>C
  hgvsp: ENST00000529290.1:c.553T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/14626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432342
  ensembl transcript: ENST00000525464
  gene symbol: CDCA5
  hgvsc: ENST00000525464.1:c.563+16T>C
  variant of: http://identifiers.org/hgnc/14626
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3485
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3135
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
hgvs: p.His185His
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 118
  num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

11-64834009-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64834009
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64834009
    reference: chr 11
allele count: 1
allele frequency: 9.297136481963555e-5
allele num: 10756
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432183
  ensembl transcript: ENST00000529290
  gene symbol: CDCA5
  hgvsc: ENST00000529290.1:c.552A>G
  hgvsp: ENSP00000432183.1:p.His185Arg
  variant of: http://identifiers.org/hgnc/14626
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432342
  ensembl transcript: ENST00000525464
  gene symbol: CDCA5
  hgvsc: ENST00000525464.1:c.563+15A>G
  variant of: http://identifiers.org/hgnc/14626
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3548
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 387
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3487
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3159
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 147
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
hgvs: p.His185Arg
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7504
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

11-64834033-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64834033
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64834033
    reference: chr 11
allele count: 1
allele frequency: 9.278159213212098e-5
allele num: 10778
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432183
  ensembl transcript: ENST00000529290
  gene symbol: CDCA5
  hgvsc: ENST00000529290.1:c.528C>T
  hgvsp: ENSP00000432183.1:p.Ala177Val
  variant of: http://identifiers.org/hgnc/14626
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432342
  ensembl transcript: ENST00000525464
  gene symbol: CDCA5
  hgvsc: ENST00000525464.1:c.554C>T
  hgvsp: ENSP00000432342.1:p.Ala185Val
  variant of: http://identifiers.org/hgnc/14626
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
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genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3961
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 512
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 283
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 3495
  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
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genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 96
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 26
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala177Val
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2732
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

11-64834041-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64834041
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64834041
    reference: chr 11
allele count: 59
allele frequency: 5.47106824925816e-3
allele num: 10784
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432342
  ensembl transcript: ENST00000525464
  gene symbol: CDCA5
  hgvsc: ENST00000525464.1:c.546G>A
  hgvsp: ENST00000525464.1:c.546G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14626
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432183
  ensembl transcript: ENST00000529290
  gene symbol: CDCA5
  hgvsc: ENST00000529290.1:c.520G>A
  hgvsp: ENST00000529290.1:c.520G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14626
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4622
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2664
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genotype depth: GenotypeDepth
  all individuals: 3
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  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
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genotype depth: GenotypeDepth
  all individuals: 1786
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3461
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 154
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  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro174Pro
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 134
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

11-64834069-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 64834069
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 64834069
    reference: chr 11
allele count: 2
allele frequency: 1.857355126300148e-4
allele num: 10768
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432183
  ensembl transcript: ENST00000529290
  gene symbol: CDCA5
  hgvsc: ENST00000529290.1:c.492C>T
  hgvsp: ENSP00000432183.1:p.Ala165Val
  variant of: http://identifiers.org/hgnc/14626
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000146670
  ensembl protein: ENSP00000432342
  ensembl transcript: ENST00000525464
  gene symbol: CDCA5
  hgvsc: ENST00000525464.1:c.518C>T
  hgvsp: ENSP00000432342.1:p.Ala173Val
  variant of: http://identifiers.org/hgnc/14626
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2646
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 5087
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genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 671
  bin: 3.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala165Val
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: NaN
  allele num: 0
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7742
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539930395146139e-5
allele num: 64938
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.56e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e-1

FS
type: SiteQuality
SIO_000300: 4.737e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.75e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.422e0

DP
type: SiteQuality
SIO_000300: 1.526245e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.539598472718315e-5
allele num: 64952
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.177e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

DP
type: SiteQuality
SIO_000300: 1.527223e6

FS
type: SiteQuality
SIO_000300: 9.5e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.35e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

QD
type: SiteQuality
SIO_000300: 1.455e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.219066195294405e-4
allele num: 16406
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65106
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.006e0

QD
type: SiteQuality
SIO_000300: 1.237e1

DP
type: SiteQuality
SIO_000300: 1.531526e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.04e0

MQRankSum
type: SiteQuality
SIO_000300: 1.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.034e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 10

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9866
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.08939227865059e-4
allele num: 16422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65144
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.26e-1

FS
type: SiteQuality
SIO_000300: 6.533e0

DP
type: SiteQuality
SIO_000300: 1.533368e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.85e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.620000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.34e-1

QD
type: SiteQuality
SIO_000300: 1.02e1

GenotypeQuality
all individuals: 1411
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9928
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65278
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.59e0

MQRankSum
type: SiteQuality
SIO_000300: -1.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

DP
type: SiteQuality
SIO_000300: 1.537292e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.089e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.949999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.19e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526484506182262e-5
allele num: 65510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.879999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.211e1

DP
type: SiteQuality
SIO_000300: 1.543566e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e0

VQSLOD
type: SiteQuality
SIO_000300: 4.55e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.46e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65534
num of homozygotes: 0

Other
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num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.970089730807577e-5
allele num: 10030
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.599e0

FS
type: SiteQuality
SIO_000300: 5.411e0

DP
type: SiteQuality
SIO_000300: 1.544391e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e-1

QD
type: SiteQuality
SIO_000300: 9.85e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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African
type: Population
allele count: 1
allele frequency: 9.873617693522907e-5
allele num: 10128
num of homozygotes: 0

Other
type: Population
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65758
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.629999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.34e-1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 7.6e0

MQRankSum
type: SiteQuality
SIO_000300: -1.2e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.11e-2

DP
type: SiteQuality
SIO_000300: 1.552135e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10166
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.07588783911049e-5
allele num: 65834
num of homozygotes: 0

Other
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8616
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817520901490367e-4
allele num: 16506
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.554214e6

MQRankSum
type: SiteQuality
SIO_000300: -1.07e-1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.461e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 2.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e-1

QD
type: SiteQuality
SIO_000300: 1.274e1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517220452131695e-5
allele num: 65910
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.55e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.171e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 7.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.95e-1

DP
type: SiteQuality
SIO_000300: 1.555552e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.027000847560237e-5
allele num: 66072
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.44e-1

FS
type: SiteQuality
SIO_000300: 6.58e-1

QD
type: SiteQuality
SIO_000300: 1.538e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.5e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.559193e6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.512721991952319e-5
allele num: 66106
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.559834e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.761e0

FS
type: SiteQuality
SIO_000300: 9.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.675e0

QD
type: SiteQuality
SIO_000300: 1.333e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

VQSLOD
type: SiteQuality
SIO_000300: -1.515e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.17e-1

MQ
type: SiteQuality
SIO_000300: 5.824e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.022791850553171e-5
allele num: 66164
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.0e-2

MQ
type: SiteQuality
SIO_000300: 5.972e1

QD
type: SiteQuality
SIO_000300: 1.349e1

FS
type: SiteQuality
SIO_000300: 1.203e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.561509e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.271e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.215e0

DP
type: SiteQuality
SIO_000300: 1.563425e6

MQRankSum
type: SiteQuality
SIO_000300: -4.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

QD
type: SiteQuality
SIO_000300: 1.294e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66348
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.39e-1

FS
type: SiteQuality
SIO_000300: 1.964e0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.851e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-2

BaseQRankSum
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 18

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66354
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African
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allele count: 18
allele frequency: 1.743510267338241e-3
allele num: 10324
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele num: 900
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MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
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BaseQRankSum
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
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allele num: 900
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 1.936108422071636e-4
allele num: 10330
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66374
num of homozygotes: 0

East Asian
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele num: 6590
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African
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Other
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South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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ReadPosRankSum
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DP
type: SiteQuality
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ClippingRankSum
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MQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.505797319680771e-5
allele num: 66410
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10352
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-3

DP
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ClippingRankSum
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InbreedingCoeff
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SIO_000300: -1.0e-4

ReadPosRankSum
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FS
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MQ
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BaseQRankSum
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SIO_000300: -5.45e-1

VQSLOD
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.505888022166672e-5
allele num: 66406
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10350
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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SIO_000300: 1.175e1

ReadPosRankSum
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SIO_000300: -9.89e-1

ClippingRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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BaseQRankSum
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SIO_000300: 6.0e-3

FS
type: SiteQuality
SIO_000300: 5.032e0

DP
type: SiteQuality
SIO_000300: 1.565766e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
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Other
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66406
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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QD
type: SiteQuality
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VQSLOD
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BaseQRankSum
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FS
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InbreedingCoeff
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DP
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MQRankSum
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ClippingRankSum
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MQ
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ReadPosRankSum
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SIO_000300: -9.89e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66414
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.42e-1

DP
type: SiteQuality
SIO_000300: 1.565741e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.67e-1

MQ
type: SiteQuality
SIO_000300: 5.946e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.131e0

QD
type: SiteQuality
SIO_000300: 1.218e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.79e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
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South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66394
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.599e0

DP
type: SiteQuality
SIO_000300: 1.563641e6

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.102e1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

QD
type: SiteQuality
SIO_000300: 6.22e0

MQRankSum
type: SiteQuality
SIO_000300: -4.375e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66322
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067961165048543e-5
allele num: 16480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.07e-1

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.03e-1

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -4.32e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
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Latino
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8622
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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Other
type: Population
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MQ
type: SiteQuality
SIO_000300: 5.976e1

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
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MQRankSum
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QD
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ClippingRankSum
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.79e-1

BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele num: 888
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African
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allele frequency: 1.94325689856199e-4
allele num: 10292
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Latino
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East Asian
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European (Finnish)
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South Asian
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allele frequency: 1.822821728034998e-4
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European (Non-Finnish)
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allele frequency: 2.719361856417694e-4
allele num: 66192
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.65e-2

MQ
type: SiteQuality
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DP
type: SiteQuality
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FS
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QD
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MQRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.09e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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African
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South Asian
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European (Non-Finnish)
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European (Finnish)
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allele num: 6540
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Other
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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DP
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QD
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MQRankSum
type: SiteQuality
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FS
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SIO_000300: 1.834e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.081245439065921e-5
allele num: 16444
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66128
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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InbreedingCoeff
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SIO_000300: -2.0e-4

QD
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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VQSLOD
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MQ
type: SiteQuality
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BaseQRankSum
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SIO_000300: 8.67e-1

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.555245e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66050
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11474
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6514
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.737098344693281e-5
allele num: 10270
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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QD
type: SiteQuality
SIO_000300: 2.456e1

MQRankSum
type: SiteQuality
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MQ
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InbreedingCoeff
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DP
type: SiteQuality
SIO_000300: 1.552091e6

BaseQRankSum
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ClippingRankSum
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SIO_000300: -4.58e-1

VQSLOD
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FS
type: SiteQuality
SIO_000300: 9.01e-1

ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65994
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6508
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African
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11468
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South Asian
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allele frequency: 6.092360180333861e-5
allele num: 16414
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.54895e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.073e0

MQRankSum
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FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-1

QD
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BaseQRankSum
type: SiteQuality
SIO_000300: 9.47e-1

MQ
type: SiteQuality
SIO_000300: 5.383e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 6.105006105006105e-5
allele num: 16380
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65864
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DP
type: SiteQuality
SIO_000300: 1.543588e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.384e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.85e-1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.424e0

MQ
type: SiteQuality
SIO_000300: 5.435e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.89e-1

MQRankSum
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QD
type: SiteQuality
SIO_000300: 1.06e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 1
allele frequency: 6.105751618024179e-5
allele num: 16378
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65828
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.542465e6

MQRankSum
type: SiteQuality
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ClippingRankSum
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MQ
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SIO_000300: 5.492e1

VQSLOD
type: SiteQuality
SIO_000300: -6.279e-1

InbreedingCoeff
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SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 3.837e0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.016e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.35e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.086610284585468e-5
allele num: 64796
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African
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6286
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Latino
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allele frequency: 8.91583452211127e-5
allele num: 11216
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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FS
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VQSLOD
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QD
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ReadPosRankSum
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ClippingRankSum
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MQ
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MQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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East Asian
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European (Non-Finnish)
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allele count: 120
allele frequency: 1.877346683354193e-3
allele num: 63920
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South Asian
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African
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allele frequency: 4.037956793862306e-4
allele num: 9906
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Latino
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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DP
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QD
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VQSLOD
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ClippingRankSum
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SIO_000300: 1.7e-2

FS
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MQ
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 63810
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Other
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Latino
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South Asian
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European (Finnish)
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African
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East Asian
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.55e-1

ReadPosRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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DP
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Latino
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allele frequency: 1.838235294117647e-4
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Other
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European (Non-Finnish)
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African
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South Asian
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allele count: 135
allele frequency: 8.728824518298203e-3
allele num: 15466
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
type: SiteQuality
SIO_000300: 3.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.99e-2

DP
type: SiteQuality
SIO_000300: 1.423917e6

FS
type: SiteQuality
SIO_000300: 1.43e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.397e1

GenotypeQuality
all individuals: 764
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 995
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 713
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1401
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9746
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62992
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.191176470588235e-5
allele num: 10880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5958
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.18e0

DP
type: SiteQuality
SIO_000300: 1.423917e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.99e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e0

MQRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

FS
type: SiteQuality
SIO_000300: 1.43e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.06e-1

QD
type: SiteQuality
SIO_000300: 1.397e1

GenotypeQuality
all individuals: 1024
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39334
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 9.75e1
variant carriers: 8

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 676
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.234571095872687e-4
allele num: 15458
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8288
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9744
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5956
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.761300152361605e-5
allele num: 63008
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.151e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.44e0

FS
type: SiteQuality
SIO_000300: 1.779e0

DP
type: SiteQuality
SIO_000300: 1.42137e6

MQ
type: SiteQuality
SIO_000300: 5.99e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.8e-1

GenotypeQuality
all individuals: 576
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6146
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8357
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37054
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 74
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5816
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.610720958701115e-5
allele num: 62084
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.383154e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
SIO_000300: -8.06e-1

MQ
type: SiteQuality
SIO_000300: 5.883e1

QD
type: SiteQuality
SIO_000300: 1.589e1

VQSLOD
type: SiteQuality
SIO_000300: -1.82e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.59e-1

GenotypeQuality
all individuals: 6052
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1109
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1294
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 9.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5746
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10616
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61904
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 1.045150501672241e-3
allele num: 9568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15002
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.567e0

MQRankSum
type: SiteQuality
SIO_000300: -3.782e0

DP
type: SiteQuality
SIO_000300: 1.378401e6

MQ
type: SiteQuality
SIO_000300: 5.448e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.134e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.36e0

GenotypeQuality
all individuals: 38
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 943
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5686
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33687
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11519
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
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variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
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variant carriers: 1

GenotypeQuality
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 775
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14262
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8038
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.656891009709381e-5
allele num: 60354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.46e-1

QD
type: SiteQuality
SIO_000300: 1.506e1

VQSLOD
type: SiteQuality
SIO_000300: 4.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.48e-1

FS
type: SiteQuality
SIO_000300: 6.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

DP
type: SiteQuality
SIO_000300: 1.323517e6

GenotypeQuality
all individuals: 1611
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11519
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 273
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 775
bin: 7.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8038
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.011639321273313e-5
allele num: 14262
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.48e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.46e-1

DP
type: SiteQuality
SIO_000300: 1.323517e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

FS
type: SiteQuality
SIO_000300: 6.02e0

QD
type: SiteQuality
SIO_000300: 1.506e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

GenotypeQuality
all individuals: 252
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 727
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1935
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
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variant carriers: 0

GenotypeQuality
all individuals: 13906
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5279
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30807
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58964
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7872
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.191540653079115e-4
allele num: 9126
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5312
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.914e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.64e-1

DP
type: SiteQuality
SIO_000300: 1.275982e6

FS
type: SiteQuality
SIO_000300: 2.377e0

QD
type: SiteQuality
SIO_000300: 1.372e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

GenotypeQuality
all individuals: 69
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31399
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 413
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variant carriers: 0

GenotypeQuality
all individuals: 1066
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
all individuals: 1908
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1079
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5299
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 719
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5312
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13616
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.096972356296621e-4
allele num: 9116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58960
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.275539e6

MQRankSum
type: SiteQuality
SIO_000300: -1.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.349e1

FS
type: SiteQuality
SIO_000300: 1.317e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e-1

GenotypeQuality
all individuals: 543
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 857
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17948
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2487
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4192
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24842
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 642
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
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variant carriers: 0

GenotypeQuality
all individuals: 1306
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2490
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.579030475288173e-4
allele num: 12666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4974
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7592
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56104
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.76e-1

QD
type: SiteQuality
SIO_000300: 1.122e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.18499e6

MQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19016
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8964
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54946
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.336898395721925e-4
allele num: 7480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.27e-1

DP
type: SiteQuality
SIO_000300: 1.157296e6

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.766e0

FS
type: SiteQuality
SIO_000300: 1.104e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.2e-1

QD
type: SiteQuality
SIO_000300: 1.228e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54932
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.21287779237845e-5
allele num: 12176
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4872
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.153025e6

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

QD
type: SiteQuality
SIO_000300: 1.25e1

VQSLOD
type: SiteQuality
SIO_000300: 2.81e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.658e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

FS
type: SiteQuality
SIO_000300: 1.157e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

GenotypeQuality
all individuals: 109
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 9.75e1
variant carriers: 7

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 203
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variant carriers: 0

GenotypeQuality
all individuals: 24918
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.449275362318841e-3
allele num: 690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7442
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.092259520862157e-4
allele num: 54932
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8924
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12176
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

FS
type: SiteQuality
SIO_000300: 1.157e0

QD
type: SiteQuality
SIO_000300: 1.25e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.06e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.62e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

DP
type: SiteQuality
SIO_000300: 1.153025e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.658e0

VQSLOD
type: SiteQuality
SIO_000300: 2.81e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 65
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variant carriers: 1

GenotypeQuality
all individuals: 272
bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7094
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8064
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11002
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.877171215880893e-5
allele num: 51584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.399e0

DP
type: SiteQuality
SIO_000300: 1.045226e6

QD
type: SiteQuality
SIO_000300: 3.131e1

FS
type: SiteQuality
SIO_000300: 1.975e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.116402116402116e-5
allele num: 47250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7222
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.155e1

DP
type: SiteQuality
SIO_000300: 9.25144e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

VQSLOD
type: SiteQuality
SIO_000300: 2.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 10

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 509
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variant carriers: 0

GenotypeQuality
all individuals: 15219
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 550
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.357220412595005e-4
allele num: 7368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6464
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.839295854628052e-4
allele num: 7044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.725625539257981e-4
allele num: 46360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3938
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9016
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

QD
type: SiteQuality
SIO_000300: 1.505e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-3

FS
type: SiteQuality
SIO_000300: 2.276e0

MQRankSum
type: SiteQuality
SIO_000300: -6.68e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.05199e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.68e-1

GenotypeQuality
all individuals: 2039
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 637
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6954
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.174007565546328e-5
allele num: 45998
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.1e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.04e-1

FS
type: SiteQuality
SIO_000300: 8.59e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.386e0

QD
type: SiteQuality
SIO_000300: 1.159e1

DP
type: SiteQuality
SIO_000300: 8.96182e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 332
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GenotypeQuality
all individuals: 1467
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6954
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.551349674216568e-4
allele num: 6446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45998
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.96182e5

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.386e0

FS
type: SiteQuality
SIO_000300: 8.59e0

VQSLOD
type: SiteQuality
SIO_000300: 8.1e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.999999999999999e-3

QD
type: SiteQuality
SIO_000300: 1.159e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3765
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5924
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.432498175626368e-5
allele num: 41110
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5826
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6916
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 472
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.08e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

DP
type: SiteQuality
SIO_000300: 7.7053e5

MQ
type: SiteQuality
SIO_000300: 5.911e1

VQSLOD
type: SiteQuality
SIO_000300: -1.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.900000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.08e0

QD
type: SiteQuality
SIO_000300: 7.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.19e0

GenotypeQuality
all individuals: 794
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1149
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5822
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6660
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3436
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 7.34825846274433e-5
allele num: 40826
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.539999999999999e0

FS
type: SiteQuality
SIO_000300: 1.6675e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.261e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

DP
type: SiteQuality
SIO_000300: 7.69239e5

GenotypeQuality
all individuals: 103
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 369
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3710
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.449419487581443e-5
allele num: 40826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5840
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6660
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.474491300501327e-4
allele num: 6782
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5822
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.6675e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.84e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 9.539999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.261e0

DP
type: SiteQuality
SIO_000300: 7.69239e5

GenotypeQuality
all individuals: 7752
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variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3814
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.50676827434072e-5
allele num: 39892
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5658
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3346
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.963e0

DP
type: SiteQuality
SIO_000300: 7.39725e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.27e0

QD
type: SiteQuality
SIO_000300: 1.648e1

VQSLOD
type: SiteQuality
SIO_000300: 2.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32914
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4764
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.464e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.03e-2

FS
type: SiteQuality
SIO_000300: 1.66e0

QD
type: SiteQuality
SIO_000300: 9.029999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

DP
type: SiteQuality
SIO_000300: 6.04197e5

VQSLOD
type: SiteQuality
SIO_000300: 3.7e-2

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4704
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

VQSLOD
type: SiteQuality
SIO_000300: -2.183e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.56e-1

DP
type: SiteQuality
SIO_000300: 5.97846e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.07e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.56e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.187e1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.484320557491289e-5
allele num: 28700
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2300
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 1.341e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.48e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.64e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

DP
type: SiteQuality
SIO_000300: 5.50652e5

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4236
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.317043688482128e-5
allele num: 23164
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.502e0

VQSLOD
type: SiteQuality
SIO_000300: 4.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.395e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.88e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

DP
type: SiteQuality
SIO_000300: 5.20053e5

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.841e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e0

DP
type: SiteQuality
SIO_000300: 1.837e4

VQSLOD
type: SiteQuality
SIO_000300: -1.166e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.92e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.19e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.102e1

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.0431e4

VQSLOD
type: SiteQuality
SIO_000300: -2.281e0

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.85e-2

QD
type: SiteQuality
SIO_000300: 5.88e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

European (Finnish)
type: Population
allele count: 1
allele frequency: 5.0e-1
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 18
allele frequency: 1.428571428571428e-1
allele num: 126
num of homozygotes: 1

South Asian
type: Population
allele count: 3506
allele frequency: 5.168042452830188e-1
allele num: 6784
num of homozygotes: 869

Latino
type: Population
allele count: 51
allele frequency: 6.375e-1
allele num: 80
num of homozygotes: 17

Other
type: Population
allele count: 70
allele frequency: 6.363636363636364e-1
allele num: 110
num of homozygotes: 23

African
type: Population
allele count: 50
allele frequency: 2.717391304347826e-1
allele num: 184
num of homozygotes: 6

VQSLOD
type: SiteQuality
SIO_000300: 8.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.036e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.087e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.63e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.367e0

DP
type: SiteQuality
SIO_000300: 1.2088e5

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 90
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 5.053e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

DP
type: SiteQuality
SIO_000300: 1.32871e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.19e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.76e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 114
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7292
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 90
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.810975609756098e-4
allele num: 2624
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.864e0

VQSLOD
type: SiteQuality
SIO_000300: -2.291e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.93e-2

QD
type: SiteQuality
SIO_000300: 1.474e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.789e0

DP
type: SiteQuality
SIO_000300: 1.37295e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.32e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2666
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 3.125e-2
allele num: 192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.337971635001338e-4
allele num: 7474
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.43504e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.79e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.43e0

QD
type: SiteQuality
SIO_000300: 1.389e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2714
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.332622601279318e-4
allele num: 7504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.087e0

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.55e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

QD
type: SiteQuality
SIO_000300: 1.133e1

VQSLOD
type: SiteQuality
SIO_000300: -1.87e0

MQ
type: SiteQuality
SIO_000300: 5.85e1

DP
type: SiteQuality
SIO_000300: 1.4508e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.43e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 5.208333333333333e-3
allele num: 192
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.45062e5

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.86e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.52e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.291e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

QD
type: SiteQuality
SIO_000300: 4.01e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.157e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 134
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.332267519317879e-4
allele num: 7506
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.038e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.96e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.605e0

FS
type: SiteQuality
SIO_000300: 8.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.561e0

MQRankSum
type: SiteQuality
SIO_000300: -6.27e-1

DP
type: SiteQuality
SIO_000300: 1.46214e5

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.59e0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.08695652173913e-2
allele num: 92
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2740
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

South Asian
type: Population
allele count: 58
allele frequency: 7.727151612043699e-3
allele num: 7506
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.53e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.17e-1

DP
type: SiteQuality
SIO_000300: 1.51403e5

ClippingRankSum
type: SiteQuality
SIO_000300: -6.7e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.25e-1

QD
type: SiteQuality
SIO_000300: 1.135e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 92
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.664535038635758e-4
allele num: 7506
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.077e0

VQSLOD
type: SiteQuality
SIO_000300: -1.772e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.49302e5